Pub Date : 2024-04-17DOI: 10.1186/s12983-024-00534-2
Dariusz Jakubas, Katarzyna Wojczulanis-Jakubas, Lech Marek Iliszko
Energy and time allocation in seabirds differ between consecutive stages of breeding given various requirements of particular phases of the reproductive period. Theses allocations may also be sex-specific considering differential energetic or nutritional requirements of males and females and/or sexual segregation in foraging niches and/or areas. In this study we investigated the foraging ecology of an Arctic, zooplanktivorous seabird, the little auk Alle alle during the pre-laying period using remote sensing of the environment and GPS-TDR loggers deployed on birds. We compared foraging trips range and habitats of birds with other stages of the breeding period and between sexes. We found that little auks during the pre-laying period foraged exclusively in cold sea surface temperature zones (with temperatures < 5 ºC) but in various sea depth zones. They dived to similar depths ranging from -4.0 to -10.9 m, exploring various thermal microhabitats (with mean temperatures values ranging from 2.2 °C in Shelf sea depth zone to 5.9 °C in Deep sea depth zone). The majority of foraging trips and dives characteristics were similar to subsequent phases of breeding. However, home ranges during the pre-laying trips were wider compared to the incubation period. As expected, females exhibited wider foraging niches compared to males (wider range of sea surface temperature and sea depth in foraging locations), which could be explained by sex specific energetic and/or nutritional requirements (females producing an egg). We also delineated local foraging areas important for little auks during their whole breeding season. Protection of these areas is crucial for sustaining the local marine biodiversity. We found that little auks females during the pre-laying period explored wider foraging niches compared to males. These differences may be attributed to sex-specific nutritional or/and energetical constraints at this stage of breeding. The results of this study also emphasize the importance of shelf Arctic-type water masses as the foraging areas for little auks during successive stages of breeding.
{"title":"Sex differences in foraging ecology of a zooplanktivorous little auk Alle alle during the pre-laying period: insights from remote sensing and animal-tracking","authors":"Dariusz Jakubas, Katarzyna Wojczulanis-Jakubas, Lech Marek Iliszko","doi":"10.1186/s12983-024-00534-2","DOIUrl":"https://doi.org/10.1186/s12983-024-00534-2","url":null,"abstract":"Energy and time allocation in seabirds differ between consecutive stages of breeding given various requirements of particular phases of the reproductive period. Theses allocations may also be sex-specific considering differential energetic or nutritional requirements of males and females and/or sexual segregation in foraging niches and/or areas. In this study we investigated the foraging ecology of an Arctic, zooplanktivorous seabird, the little auk Alle alle during the pre-laying period using remote sensing of the environment and GPS-TDR loggers deployed on birds. We compared foraging trips range and habitats of birds with other stages of the breeding period and between sexes. We found that little auks during the pre-laying period foraged exclusively in cold sea surface temperature zones (with temperatures < 5 ºC) but in various sea depth zones. They dived to similar depths ranging from -4.0 to -10.9 m, exploring various thermal microhabitats (with mean temperatures values ranging from 2.2 °C in Shelf sea depth zone to 5.9 °C in Deep sea depth zone). The majority of foraging trips and dives characteristics were similar to subsequent phases of breeding. However, home ranges during the pre-laying trips were wider compared to the incubation period. As expected, females exhibited wider foraging niches compared to males (wider range of sea surface temperature and sea depth in foraging locations), which could be explained by sex specific energetic and/or nutritional requirements (females producing an egg). We also delineated local foraging areas important for little auks during their whole breeding season. Protection of these areas is crucial for sustaining the local marine biodiversity. We found that little auks females during the pre-laying period explored wider foraging niches compared to males. These differences may be attributed to sex-specific nutritional or/and energetical constraints at this stage of breeding. The results of this study also emphasize the importance of shelf Arctic-type water masses as the foraging areas for little auks during successive stages of breeding.","PeriodicalId":55142,"journal":{"name":"Frontiers in Zoology","volume":"30 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140603631","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-16DOI: 10.1186/s12983-024-00532-4
Liming Chang, Wei Zhu, Jianping Jiang
Anuran metamorphosis, which is driven by thyroid hormone (TH)-mediated processes, orchestrates intricate morphological and functional transformations for the transition from aquatic tadpoles to terrestrial life, providing a valuable model for studying organ functionalization, remodeling, and regression. Larva-specific organ regression is one of the most striking phenomena observed during the anuran metamorphic climax. While previous studies extensively analyzed the regression mechanisms of the tail, the molecular processes governing gill resorption remain elusive. We employed Microhyla fissipes as a model, and utilized a comprehensive approach involving histological analysis, transmission electron microscopy, and transcriptomics to unravel gill development and resorption. The pro-metamorphic stages revealed highly developed gill structures, emphasizing their crucial role as the primary respiratory organ for tadpoles. The transcriptomic analysis highlighted the upregulation of genes associated with enhanced respiratory efficiency, such as hemoglobin and mucins. However, as metamorphosis progressed, gill filaments underwent shrinkage, decreases in blood vessel density, and structural changes that signified a decline in respiratory function. The molecular mechanisms driving gill resorption involved the TH pathway—in particular, the upregulation of thyroid hormone receptor (TR) β, genes associated with the tumor necrosis factor pathway and matrix metalloproteinases. Two distinct pathways orchestrate gill resorption, involving apoptosis directly induced by TH and cell death through the degradation of the extracellular matrix. In addition, metabolic reorganization during metamorphosis is a complex process, with tadpoles adapting their feeding behavior and mobilizing energy storage organs. The gills, which were previously overlooked, have been unveiled as potential energy storage organs that undergo metabolic reorganization. The transcriptomic analysis revealed dynamic changes in metabolism-related genes, indicating decreased protein synthesis and energy production and enhanced substrate transport and metabolism during metamorphic climax. This study sheds light on the structural, molecular, and metabolic dynamics during gill development and resorption in M. fissipes. The findings deepen our understanding of the intricate mechanisms governing organ regression and underscore the pivotal role of the gills in facilitating the transition from aquatic to terrestrial habitats.
{"title":"What frog gill resorption brings: loss of function, cell death, and metabolic reorganization","authors":"Liming Chang, Wei Zhu, Jianping Jiang","doi":"10.1186/s12983-024-00532-4","DOIUrl":"https://doi.org/10.1186/s12983-024-00532-4","url":null,"abstract":"Anuran metamorphosis, which is driven by thyroid hormone (TH)-mediated processes, orchestrates intricate morphological and functional transformations for the transition from aquatic tadpoles to terrestrial life, providing a valuable model for studying organ functionalization, remodeling, and regression. Larva-specific organ regression is one of the most striking phenomena observed during the anuran metamorphic climax. While previous studies extensively analyzed the regression mechanisms of the tail, the molecular processes governing gill resorption remain elusive. We employed Microhyla fissipes as a model, and utilized a comprehensive approach involving histological analysis, transmission electron microscopy, and transcriptomics to unravel gill development and resorption. The pro-metamorphic stages revealed highly developed gill structures, emphasizing their crucial role as the primary respiratory organ for tadpoles. The transcriptomic analysis highlighted the upregulation of genes associated with enhanced respiratory efficiency, such as hemoglobin and mucins. However, as metamorphosis progressed, gill filaments underwent shrinkage, decreases in blood vessel density, and structural changes that signified a decline in respiratory function. The molecular mechanisms driving gill resorption involved the TH pathway—in particular, the upregulation of thyroid hormone receptor (TR) β, genes associated with the tumor necrosis factor pathway and matrix metalloproteinases. Two distinct pathways orchestrate gill resorption, involving apoptosis directly induced by TH and cell death through the degradation of the extracellular matrix. In addition, metabolic reorganization during metamorphosis is a complex process, with tadpoles adapting their feeding behavior and mobilizing energy storage organs. The gills, which were previously overlooked, have been unveiled as potential energy storage organs that undergo metabolic reorganization. The transcriptomic analysis revealed dynamic changes in metabolism-related genes, indicating decreased protein synthesis and energy production and enhanced substrate transport and metabolism during metamorphic climax. This study sheds light on the structural, molecular, and metabolic dynamics during gill development and resorption in M. fissipes. The findings deepen our understanding of the intricate mechanisms governing organ regression and underscore the pivotal role of the gills in facilitating the transition from aquatic to terrestrial habitats.","PeriodicalId":55142,"journal":{"name":"Frontiers in Zoology","volume":"25 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140557220","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: Rapid identification and classification of bats are critical for practical applications. However, species identification of bats is a typically detrimental and time-consuming manual task that depends on taxonomists and well-trained experts. Deep Convolutional Neural Networks (DCNNs) provide a practical approach for the extraction of the visual features and classification of objects, with potential application for bat classification.
Results: In this study, we investigated the capability of deep learning models to classify 7 horseshoe bat taxa (CHIROPTERA: Rhinolophus) from Southern China. We constructed an image dataset of 879 front, oblique, and lateral targeted facial images of live individuals collected during surveys between 2012 and 2021. All images were taken using a standard photograph protocol and setting aimed at enhancing the effectiveness of the DCNNs classification. The results demonstrated that our customized VGG16-CBAM model achieved up to 92.15% classification accuracy with better performance than other mainstream models. Furthermore, the Grad-CAM visualization reveals that the model pays more attention to the taxonomic key regions in the decision-making process, and these regions are often preferred by bat taxonomists for the classification of horseshoe bats, corroborating the validity of our methods.
Conclusion: Our finding will inspire further research on image-based automatic classification of chiropteran species for early detection and potential application in taxonomy.
{"title":"Fine-grained image classification on bats using VGG16-CBAM: a practical example with 7 horseshoe bats taxa (CHIROPTERA: Rhinolophidae: Rhinolophus) from Southern China.","authors":"Zhong Cao, Kunhui Wang, Jiawei Wen, Chuxian Li, Yi Wu, Xiaoyun Wang, Wenhua Yu","doi":"10.1186/s12983-024-00531-5","DOIUrl":"10.1186/s12983-024-00531-5","url":null,"abstract":"<p><strong>Background: </strong>Rapid identification and classification of bats are critical for practical applications. However, species identification of bats is a typically detrimental and time-consuming manual task that depends on taxonomists and well-trained experts. Deep Convolutional Neural Networks (DCNNs) provide a practical approach for the extraction of the visual features and classification of objects, with potential application for bat classification.</p><p><strong>Results: </strong>In this study, we investigated the capability of deep learning models to classify 7 horseshoe bat taxa (CHIROPTERA: Rhinolophus) from Southern China. We constructed an image dataset of 879 front, oblique, and lateral targeted facial images of live individuals collected during surveys between 2012 and 2021. All images were taken using a standard photograph protocol and setting aimed at enhancing the effectiveness of the DCNNs classification. The results demonstrated that our customized VGG16-CBAM model achieved up to 92.15% classification accuracy with better performance than other mainstream models. Furthermore, the Grad-CAM visualization reveals that the model pays more attention to the taxonomic key regions in the decision-making process, and these regions are often preferred by bat taxonomists for the classification of horseshoe bats, corroborating the validity of our methods.</p><p><strong>Conclusion: </strong>Our finding will inspire further research on image-based automatic classification of chiropteran species for early detection and potential application in taxonomy.</p>","PeriodicalId":55142,"journal":{"name":"Frontiers in Zoology","volume":"21 1","pages":"10"},"PeriodicalIF":2.8,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10983684/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140337805","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-03-19DOI: 10.1186/s12983-024-00530-6
Elena Buzan, Hubert Potočnik, Boštjan Pokorny, Sandra Potušek, Laura Iacolina, Urška Gerič, Felicita Urzi, Ivan Kos
A comprehensive understanding of the dietary habits of carnivores is essential to get ecological insights into their role in the ecosystem, potential competition with other carnivorous species, and their effect on prey populations. Genetic analysis of non-invasive samples, such as scats, can supplement behavioural or microscopic diet investigations. The objective of this study was to employ DNA metabarcoding to accurately determine the prey species in grey wolf (Canis lupus) and Eurasian lynx (Lynx lynx) scat samples collected in the Julian Alps and the Dinaric Mountains, Slovenia. The primary prey of wolves were red deer (Cervus elaphus) (detected in 96% scat samples), European roe deer (Capreolus capreolus) (68%), and wild boar (Sus scrofa) (45%). A smaller portion of their diet consisted of mesocarnivores, small mammals, and domestic animals. In contrast, the lynx diet mostly consisted of European roe deer (82%) and red deer (64%). However, small mammals and domestic animals were also present in lynx diet, albeit to a lesser extent. Our findings indicate that the dietary habits of wolves and lynx are influenced by geographical location. Snapshot dietary analyses using metabarcoding are valuable for comprehending the behaviour and ecology of predators, and for devising conservation measures aimed at sustainable management of both their natural habitats and prey populations. However, to gain a more detailed understanding of wolf and lynx dietary habits and ecological impact, it would be essential to conduct long-term genetic monitoring of their diet.
要从生态学角度深入了解食肉动物在生态系统中的作用、与其他食肉物种的潜在竞争以及对猎物种群的影响,就必须全面了解食肉动物的饮食习惯。对粪便等非侵入性样本进行基因分析,可以补充行为或显微饮食调查。本研究的目的是利用 DNA 代谢编码准确确定在斯洛文尼亚朱利安阿尔卑斯山和迪纳拉山区采集的灰狼和欧亚猞猁粪便样本中的猎物种类。狼的主要猎物是红鹿(Cervus elaphus)(在 96% 的粪便样本中检测到)、欧洲狍(Capreolus capreolus)(68%)和野猪(Sus scrofa)(45%)。它们的食物中还有一小部分是中食肉动物、小型哺乳动物和家畜。相比之下,猞猁的食物主要是欧洲狍(82%)和红鹿(64%)。不过,猞猁的食物中也有小型哺乳动物和家畜,只是数量较少。我们的研究结果表明,狼和猞猁的饮食习惯受到地理位置的影响。利用代谢编码进行的饮食分析对于了解食肉动物的行为和生态,以及制定旨在对其自然栖息地和猎物种群进行可持续管理的保护措施非常有价值。然而,要想更详细地了解狼和猞猁的饮食习惯和对生态的影响,就必须对它们的饮食进行长期的遗传监测。
{"title":"Molecular analysis of scats revealed diet and prey choice of grey wolves and Eurasian lynx in the contact zone between the Dinaric Mountains and the Alps.","authors":"Elena Buzan, Hubert Potočnik, Boštjan Pokorny, Sandra Potušek, Laura Iacolina, Urška Gerič, Felicita Urzi, Ivan Kos","doi":"10.1186/s12983-024-00530-6","DOIUrl":"10.1186/s12983-024-00530-6","url":null,"abstract":"<p><p>A comprehensive understanding of the dietary habits of carnivores is essential to get ecological insights into their role in the ecosystem, potential competition with other carnivorous species, and their effect on prey populations. Genetic analysis of non-invasive samples, such as scats, can supplement behavioural or microscopic diet investigations. The objective of this study was to employ DNA metabarcoding to accurately determine the prey species in grey wolf (Canis lupus) and Eurasian lynx (Lynx lynx) scat samples collected in the Julian Alps and the Dinaric Mountains, Slovenia. The primary prey of wolves were red deer (Cervus elaphus) (detected in 96% scat samples), European roe deer (Capreolus capreolus) (68%), and wild boar (Sus scrofa) (45%). A smaller portion of their diet consisted of mesocarnivores, small mammals, and domestic animals. In contrast, the lynx diet mostly consisted of European roe deer (82%) and red deer (64%). However, small mammals and domestic animals were also present in lynx diet, albeit to a lesser extent. Our findings indicate that the dietary habits of wolves and lynx are influenced by geographical location. Snapshot dietary analyses using metabarcoding are valuable for comprehending the behaviour and ecology of predators, and for devising conservation measures aimed at sustainable management of both their natural habitats and prey populations. However, to gain a more detailed understanding of wolf and lynx dietary habits and ecological impact, it would be essential to conduct long-term genetic monitoring of their diet.</p>","PeriodicalId":55142,"journal":{"name":"Frontiers in Zoology","volume":"21 1","pages":"9"},"PeriodicalIF":2.8,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10949697/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140159589","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-03-18DOI: 10.1186/s12983-024-00529-z
Alison G. Cole, Julia Steger, Julia Hagauer, Andreas Denner, Patricio Ferrer Murguia, Paul Knabl, Sanjay Narayanaswamy, Brittney Wick, Juan D. Montenegro, Ulrich Technau
The recent combination of genomics and single cell transcriptomics has allowed to assess a variety of non-conventional model organisms in much more depth. Single cell transcriptomes can uncover hidden cellular complexity and cell lineage relationships within organisms. The recent developmental cell atlases of the sea anemone Nematostella vectensis, a representative of the basally branching Cnidaria, has provided new insights into the development of all cell types (Steger et al Cell Rep 40(12):111370, 2022; Sebé-Pedrós et al. Cell 173(6):1520–1534.e20). However, the mapping of the single cell reads still suffers from relatively poor gene annotations and a draft genome consisting of many scaffolds. Here we present a new wildtype resource of the developmental single cell atlas, by re-mapping of sequence data first published in Steger et al. (2022) and Cole et al. (Nat Commun 14(1):1747, 2023), to the new chromosome-level genome assembly and corresponding gene models in Zimmermann et al. (Nat Commun 14, 8270 (2023). https://doi.org/10.1038/s41467-023-44080-7 ). We expand the pre-existing dataset through the incorporation of additional sequence data derived from the capture and sequencing of cell suspensions from four additional samples: 24 h gastrula, 2d planula, an inter-parietal region of the bodywall from a young unsexed animal, and another adult mesentery from a mature male animal. Our analyses of the full cell-state inventory provide transcriptomic signatures for 127 distinct cell states, of which 47 correspond to neuroglandular subtypes. We also identify two distinct putatively immune-related transcriptomic profiles that segregate between the inner and outer cell layers. Furthermore, the new gene annotation Nv2 has markedly improved the mapping on the single cell transcriptome data and will therefore be of great value for the community and anyone using the dataset.
{"title":"Updated single cell reference atlas for the starlet anemone Nematostella vectensis","authors":"Alison G. Cole, Julia Steger, Julia Hagauer, Andreas Denner, Patricio Ferrer Murguia, Paul Knabl, Sanjay Narayanaswamy, Brittney Wick, Juan D. Montenegro, Ulrich Technau","doi":"10.1186/s12983-024-00529-z","DOIUrl":"https://doi.org/10.1186/s12983-024-00529-z","url":null,"abstract":"The recent combination of genomics and single cell transcriptomics has allowed to assess a variety of non-conventional model organisms in much more depth. Single cell transcriptomes can uncover hidden cellular complexity and cell lineage relationships within organisms. The recent developmental cell atlases of the sea anemone Nematostella vectensis, a representative of the basally branching Cnidaria, has provided new insights into the development of all cell types (Steger et al Cell Rep 40(12):111370, 2022; Sebé-Pedrós et al. Cell 173(6):1520–1534.e20). However, the mapping of the single cell reads still suffers from relatively poor gene annotations and a draft genome consisting of many scaffolds. Here we present a new wildtype resource of the developmental single cell atlas, by re-mapping of sequence data first published in Steger et al. (2022) and Cole et al. (Nat Commun 14(1):1747, 2023), to the new chromosome-level genome assembly and corresponding gene models in Zimmermann et al. (Nat Commun 14, 8270 (2023). https://doi.org/10.1038/s41467-023-44080-7 ). We expand the pre-existing dataset through the incorporation of additional sequence data derived from the capture and sequencing of cell suspensions from four additional samples: 24 h gastrula, 2d planula, an inter-parietal region of the bodywall from a young unsexed animal, and another adult mesentery from a mature male animal. Our analyses of the full cell-state inventory provide transcriptomic signatures for 127 distinct cell states, of which 47 correspond to neuroglandular subtypes. We also identify two distinct putatively immune-related transcriptomic profiles that segregate between the inner and outer cell layers. Furthermore, the new gene annotation Nv2 has markedly improved the mapping on the single cell transcriptome data and will therefore be of great value for the community and anyone using the dataset.","PeriodicalId":55142,"journal":{"name":"Frontiers in Zoology","volume":"105 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140146019","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-03-12DOI: 10.1186/s12983-024-00528-0
Jürgen Heinze, Ulrich Technau
<p>Few scholars have left a deep and remaining influence on generations of zoologists. One of them is certainly Claus Nielsen, who recently passed away at the age of 85 years. Claus Nielsen was on the editorial board of Frontiers in Zoology, the journal of the German Zoological Society, for the last 20 years, since 2003. On behalf of the whole Editorial board and the publisher team, we would like to acknowledge the many years of commitment of Claus to our journal.</p><p>Claus was born in Copenhagen in 1938, and has for almost all his life studied and worked in Copenhagen. He obtained his Dr. Phil. in 1972 at the University of Copenhagen with a work on entoprocts, for which he became one of the world specialists. After several years of working as a lecturer and Associate Professor at the Zoological Museum in Copenhagen and the University of Copenhagen, he became Professor of Evolutionary Invertebrate Embryology in 2005. At the Zoological Museum, he served as a curator of entoprocts, ectoprocts, phoronids, brachiopods, pterobranchs, enteropneusts as well as later of urochordates and echinoderms.</p><p>Claus Nielsen had a world-wide recognition as an expert of marine invertebrates, with a strong interest in ciliary larvae, their evolutionary origin and relationships. Based on his thorough knowledge on all developmental forms of marine invertebrates, he was convinced that the common ancestor of Bilateria evolved from such ciliary larvae. His book “Animal Evolution: Interrelationships of the Living Phyla” published by Oxford University Press in 1995 was a guide and standard textbook for many evolutionary biologists and zoologists for several decades and remains influential up to this day. Claus received many honors, among them the prestigious Alexander Kovalevsky medal of the St. Petersburg Society of Naturalists (2001). In 2006 he became a foreign member of the Linnean Society of London and received the Linnean Medal for Zoology in 2015. He was an honorary member of the Society for Integrative and Comparative Biology and of the International Society for Invertebrate Morphology. He served in many academic committees and review panels. What is more, he was a fantastic, inspiring teacher in numerous field courses at marine stations, where his enthusiasm and witty charm has inspired and motivated generations of students. I also witnessed his tireless fascination and love for marine organisms, as well as his humor in practical courses taught to international Ph.D. students at the Marine station in Kristineberg, Sweden. His spirit, his scholarship and his friendly nature will be missed.</p><h3>Authors and Affiliations</h3><ol><li><p>LS Zoologie/Evolutionsbiologie, Universität Regensburg, Regensburg, Germany</p><p>Jürgen Heinze</p></li><li><p>Department for Neurosciences and Developmental Biology, Division of Molecular Evolution and Development, Research Platform Single Cell Regulation of Stem Cells, Faculty of Life Sciences, University of Vienna, Vienna, A
很少有学者能给一代又一代的动物学家留下深刻的影响。克劳斯-尼尔森(Claus Nielsen)无疑是其中之一,他最近刚刚去世,享年 85 岁。克劳斯-尼尔森自 2003 年起担任德国动物学会期刊《动物学前沿》(Frontiers in Zoology)的编委长达 20 年之久。克劳斯 1938 年出生于哥本哈根,几乎一生都在哥本哈根学习和工作。1972 年,他在哥本哈根大学获得了哲学博士学位,研究方向为内生菌,并成为该领域的世界级专家之一。在哥本哈根动物博物馆和哥本哈根大学担任讲师和副教授数年后,他于 2005 年成为无脊椎动物进化胚胎学教授。克劳斯-尼尔森是世界公认的海洋无脊椎动物专家,对睫状幼体、其进化起源和关系有着浓厚的兴趣。克劳斯-尼尔森是世界公认的海洋无脊椎动物专家,对纤毛幼虫、其进化起源和关系有着浓厚的兴趣。基于他对海洋无脊椎动物所有发育形式的透彻了解,他坚信双脊类的共同祖先就是由这种纤毛幼虫进化而来的。他的著作《动物进化论》(Animal Evolution:1995 年,牛津大学出版社出版了他的《动物进化论:生物门类的相互关系》一书,几十年来,这本书一直是许多进化生物学家和动物学家的指南和标准教科书,至今仍具有影响力。克劳斯获得过许多荣誉,其中包括著名的圣彼得堡博物学家协会亚历山大-科瓦列夫斯基奖章(2001 年)。2006 年,他成为伦敦林奈学会外籍会员,并于 2015 年获得林奈动物学奖章。他是综合比较生物学学会和国际无脊椎动物形态学学会的荣誉会员。他曾在许多学术委员会和评审小组任职。此外,他还是海洋站众多野外课程中一位出色的启发式教师,他的热情和诙谐魅力激励和鼓舞了一代又一代的学生。我还亲眼目睹了他对海洋生物孜孜不倦的痴迷和热爱,以及他在瑞典克里斯汀堡海洋站为国际博士生讲授实践课程时的幽默风趣。我们将永远怀念他的精神、他的学识和他的友善。作者和工作单位德国雷根斯堡雷根斯堡大学动物学/进化生物学系Jürgen Heinze生命科学院神经科学和发育生物学系,分子进化和发育部,干细胞单细胞调控研究平台、作者Jürgen Heinze查看作者发表的论文您也可以在PubMed Google Scholar中搜索该作者Ulrich Technau查看作者发表的论文您也可以在PubMed Google Scholar中搜索该作者通讯作者:Ulrich Technau。开放获取本文采用知识共享署名 4.0 国际许可协议进行许可,该协议允许以任何媒介或格式使用、共享、改编、分发和复制,只要您适当注明原作者和来源,提供知识共享许可协议的链接,并说明是否进行了修改。本文中的图片或其他第三方材料均包含在文章的知识共享许可协议中,除非在材料的署名栏中另有说明。如果材料未包含在文章的知识共享许可协议中,且您打算使用的材料不符合法律规定或超出许可使用范围,则您需要直接从版权所有者处获得许可。要查看该许可的副本,请访问 http://creativecommons.org/licenses/by/4.0/。除非在数据的信用行中另有说明,否则知识共享公共领域专用免责声明 (http://creativecommons.org/publicdomain/zero/1.0/) 适用于本文提供的数据。转载与许可引用本文Heinze, J., Technau, U. Obituary:Claus Nielsen 1938-2024.Front Zool 21, 7 (2024). https://doi.org/10.1186/s12983-024-00528-0Download citationPublished: 12 March 2024DOI: https://doi.org/10.1186/s12983-024-00528-0Share this articleAnyone you share the following link with will be able to read this content:Get shareable linkSorry, a shareable link is not currently available for this article.Copy to clipboard Provided by the Springer Nature SharedIt content-sharing initiative
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Pub Date : 2024-03-05DOI: 10.1186/s12983-024-00527-1
Thomas Schwaha, Sebastian H. Decker, Christian Baranyi, Ahmed J. Saadi
One of the most peculiar groups of the mostly colonial phylum Bryozoa is the taxon Monobryozoon, whose name already implies non-colonial members of the phylum. Its peculiarity and highly unusual lifestyle as a meiobenthic clade living on sand grains has fascinated many biologists. In particular its systematic relationship to other bryozoans remains a mystery. Despite numerous searches for M. ambulans in its type locality Helgoland, a locality with a long-lasting marine station and tradition of numerous courses and workshops, it has never been reencountered until today. Here we report the first observations of this almost mythical species, Monobryozoon ambulans. For the first time since 1938, we present new modern, morphological analyses of this species as well as the first ever molecular data. Our detailed morphological analysis confirms most previous descriptions, but also ascertains the presence of special ambulatory polymorphic zooids. We consider these as bud anlagen that ultimately consecutively separate from the animal rendering it pseudo-colonial. The remaining morphological data show strong ties to alcyonidioidean ctenostome bryozoans. Our morphological data is in accordance with the phylogenomic analysis, which clusters it with species of Alcyonidium as a sister group to multiporate ctenostomes. Divergence time estimation and ancestral state reconstruction recover the solitary state of M. ambulans as a derived character that probably evolved in the Late Cretaceous. In this study, we also provide the entire mitogenome of M. ambulans, which—despite the momentary lack of comparable data—provides important data of a unique and rare species for comparative aspects in the future. We were able to provide first sequence data and modern morphological data for the unique bryozoan, M. ambulans, which are both supporting an alcyonidioidean relationship within ctenostome bryozoans.
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Pub Date : 2024-03-05DOI: 10.1186/s12983-024-00526-2
Jeremias N. Brand
<p><b>Correction: Frontiers in Zoology (2023) 20:31</b> <b>https://doi.org/10.1186/s12983-023-00509-9</b></p><p>Following publication of the original article [1], the authors reported an error in the spelling of a species name.</p><p>Based on the taxonomic code of zoology (https://code.iczn.org/formation-and-treatment-of-names/article-32-original-spellings), the species name “Macrostomum schäreri” in the article should be corrected to “Macrostomum schareri”.</p><p>The original article [1] has been updated.</p><ol data-track-component="outbound reference"><li data-counter="1."><p>Brand JN. Support for a radiation of free-living flatworms in the African Great Lakes region and the description of five new <i>Macrostomum</i> species. Front Zool. 2023;20:31. https://doi.org/10.1186/s12983-023-00509-9.</p><p>Article PubMed PubMed Central Google Scholar </p></li></ol><p>Download references<svg aria-hidden="true" focusable="false" height="16" role="img" width="16"><use xlink:href="#icon-eds-i-download-medium" xmlns:xlink="http://www.w3.org/1999/xlink"></use></svg></p><h3>Authors and Affiliations</h3><ol><li><p>Department of Environmental Sciences, Zoological Institute, University of Basel, Vesalgasse 1, Basel, 4051, Switzerland</p><p>Jeremias N. Brand</p></li><li><p>Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Science, Am Fassberg 11, 37077, Göttingen, Germany</p><p>Jeremias N. Brand</p></li></ol><span>Authors</span><ol><li><span>Jeremias N. Brand</span>View author publications<p>You can also search for this author in <span>PubMed<span> </span>Google Scholar</span></p></li></ol><h3>Corresponding author</h3><p>Correspondence to Jeremias N. Brand.</p><h3>Publisher's Note</h3><p>Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p><p><b>Open Access</b> This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.</p>