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25 Years of ISBER: A Personal Perspective. ISBER 25 年:个人视角。
IF 1.6 4区 生物学 Pub Date : 2024-10-01 DOI: 10.1089/bio.2024.0127
Jim Vaught
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引用次数: 0
Rosalind Franklin Society Proudly Announces the 2023 Award Recipient for Biopreservation and Biobanking. 罗莎琳德-富兰克林学会自豪地宣布 2023 年生物保存和生物库获奖者。
IF 1.6 4区 生物学 Pub Date : 2024-10-01 DOI: 10.1089/bio.2024.93645.rfs2023
Emily Higgs
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引用次数: 0
Experts Speak Forum: Community Engagement in Research Biobanking. 专家论坛:社区参与生物库研究。
IF 1.6 4区 生物学 Pub Date : 2024-10-01 DOI: 10.1089/bio.2024.0131
Carol J Weil, Sandra Nanyonga, Azure Hermes, Alice McCarthy, Marielle Gross, Hellen Nansumba, Io Hong Cheong, Rubi-Jayne Cohen
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引用次数: 0
Support for Research Biobanks Among Medical Students in the Republic of Kazakhstan. 哈萨克斯坦共和国医学生对研究生物库的支持。
IF 1.6 4区 生物学 Pub Date : 2024-10-01 Epub Date: 2024-03-25 DOI: 10.1089/bio.2023.0114
Dariusz Walkowiak, Alua Miraleyeva, Tamara Batyrova, Jan Domaradzki

Background: Over the past few years, several biobanks have been organized in the Republic of Kazakhstan (RoK). As research biobanks are becoming an increasingly important tool for precision medicine, they require competent biobankers who will help disseminate the idea of biobanking throughout the society and support donation for research purposes. This study aimed to assess the support for research biobanks among medical students (MSs) in Kazakhstan. Methods: This research includes data from an anonymous, self-administered online questionnaire regarding MSs' support for research biobanks in the RoK. Results: Only 212 (31.3%) MSs have heard of biobanks and 466 (68.7%) have not. Students who were biobank-aware held more positive views regarding biobanks, were more likely to support the idea of establishing a research biobank in Kazakhstan, and expressed a greater willingness to donate their biological material for research purposes. Students' awareness of biobanks was also associated with the respondents' motivations to donate. Students who were familiar with biobanks tended to be motivated by altruistic reasons more often, and those unfamiliar with biobanks tended to indicate selfish motives. Students' attitudes toward donation to various types of research and biobanks were influenced by their awareness of biobanks, any family history of genetic disease, experience of chronic disease, declared religiousness, hospitalization history, blood donor status, and year of study. Conclusion: Since MSs' awareness of research biobanks is low, there is an urgent need for biobank education in Kazakhstan.

背景:过去几年中,哈萨克斯坦共和国(RoK)建立了多个生物库。由于研究型生物库正日益成为精准医学的重要工具,因此需要有能力的生物库管理员帮助在全社会传播生物库理念,并支持为研究目的进行捐赠。本研究旨在评估哈萨克斯坦医科学生(MSs)对研究生物库的支持情况。研究方法:本研究采用匿名、自填式在线问卷调查的方式,收集有关哈萨克斯坦医科学生对研究生物库支持情况的数据。结果只有 212 名(31.3%)硕士听说过生物库,466 名(68.7%)没有听说过。了解生物库的学生对生物库持有更积极的看法,更有可能支持在哈萨克斯坦建立研究型生物库的想法,并表示更愿意为研究目的捐赠自己的生物材料。学生对生物库的了解程度也与受访者的捐赠动机有关。熟悉生物库的学生更倾向于利他主义动机,而不熟悉生物库的学生则倾向于自私动机。学生对各类研究和生物库的捐赠态度受其对生物库的认识、家族遗传病史、慢性病经历、宗教信仰、住院史、献血者身份和就读年级的影响。结论由于会员国对研究型生物库的认识不足,哈萨克斯坦迫切需要开展生物库教育。
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引用次数: 0
Institutional Conversion to Energy-Efficient Ultra-Low Freezers Decreases Carbon Footprint and Reduces Energy Costs. 机构改用高能效超低冷冻机可减少碳足迹并降低能源成本。
IF 1.6 4区 生物学 Pub Date : 2024-09-25 DOI: 10.1089/bio.2024.0070
Dean Shehu, Mi-Ok Kim, John Rosendo, Nevan Krogan, David O Morgan, B Joseph Guglielmo

Introduction: The storage of biospecimens is a substantial source of greenhouse gas emissions and institutional energy costs. Energy-intensive ultra-low temperature (ULT) freezers used for biospecimen storage are a significant source of carbon emissions. ENERGY STAR-certified ULT freezers have the potential to decrease the carbon footprint. Objective: Quantify the impact of an institutional-scale freezer conversion program on carbon emissions and energy costs. Methods: A ULT freezer energy use prediction model was developed to identify and replace the most inefficient freezers in the research building for this pilot, and eventually institution-wide. Multiple linear regression factors included the number of years of use, storage volume, and ENERGY STAR certification status. Electrical usage and carbon emissions were quantified before and after replacement with ENERGY STAR models. Logistical methods were developed to decrease the risks of exposure of frozen samples to ambient temperature during content transfers. Institution-wide energy costs were derived by converting electrical burden to electrical costs. Carbon footprint assessment from ULT freezer operation was computed using the U.S. EPA Greenhouse Gas Equivalencies Calculator. Results: The pilot project revealed an annual reduction of 310,493 kilowatt hours of electrical usage, equivalent to 134 metric tons of carbon emissions. Annual electrical costs were reduced by $55,889 resulting in an 8-year payback on the initial investment. Using the pilot results, we modeled the benefit of the freezer exchange across the entire institution. The modeling predicted that conversion of the institution's remaining 1119 conventional ULT freezers to ENERGY STAR models would lower annual electrical usage by 7,911,549 kilowatt hours (3423 metric tons of carbon emissions), resulting in savings of over $1.4 million annually. Conclusion: Our methods make a large-scale initiative to replace energy-inefficient ULT freezers logistically possible, reduce carbon footprint, and demonstrate an attractive return on investment while proactively protecting valuable research materials.

导言:生物样本的储存是温室气体排放和机构能源成本的重要来源。用于生物样本存储的能源密集型超低温(ULT)冷冻机是碳排放的重要来源。获得能源之星认证的超低温冷冻机有可能减少碳足迹。目标:量化机构规模的冷冻箱转换计划对碳排放和能源成本的影响。方法:开发了一个 ULT 冷冻机能耗预测模型,用于识别和替换研究大楼中能效最差的冷冻机。多元线性回归因素包括使用年数、存储量和能源之星认证状态。在更换为能源之星型号之前和之后,对用电量和碳排放量进行了量化。制定了物流方法,以降低内容转移过程中冷冻样本暴露在环境温度下的风险。通过将电力负担转换为电力成本,得出了整个机构的能源成本。使用美国 EPA 温室气体当量计算器计算了 ULT 冷冻机运行的碳足迹评估。结果:试点项目显示,每年可减少 310,493 千瓦时的用电量,相当于 134 公吨的碳排放量。每年的电力成本减少了 55,889 美元,初始投资回收期为 8 年。利用试点结果,我们对整个机构的冰柜交换效益进行了建模。根据模型预测,将该机构剩余的 1119 台传统 ULT 冷冻机转换为能源之星型号后,每年的用电量将减少 7,911,549 千瓦时(碳排放量为 3423 公吨),每年可节省 140 多万美元。结论:我们的方法使大规模更换能源效率低下的超低温冷冻箱成为可能,减少了碳足迹,并展示了极具吸引力的投资回报,同时主动保护了宝贵的研究材料。
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引用次数: 0
MIBLood-EV: An Online Reporting Tool to Facilitate the Standardized Reporting of Preanalytical Variables and Quality Control of Plasma and Serum to Enhance Rigor and Reproducibility in Liquid Biopsy Research. MIBLood-EV:促进血浆和血清分析前变量标准化报告和质量控制的在线报告工具,以提高液体活检研究的严谨性和可重复性。
IF 1.6 4区 生物学 Pub Date : 2024-09-09 DOI: 10.1089/bio.2024.0083
Dakota Gustafson, Rienk Nieuwland, Fabrice Lucien

Pre-analytical variability significantly impacts the reproducibility of liquid biopsy research, which is critical for precision medicine and biomedical research. This report highlights the challenges and variability in the pre-analytical processes of liquid biopsies, especially regarding extracellular vesicles (EVs), which are crucial for diagnostics in oncology. The MIBlood-EV initiative aims to standardize the reporting of pre-analytical variables and the quality control of plasma and serum samples to enhance reproducibility in EV research. By providing a comprehensive and flexible reporting framework, MIBlood-EV seeks to improve the reliability of EV studies and facilitate the development of evidence-based protocols, ultimately advancing the field of liquid biopsy research.

分析前的可变性严重影响了液体活检研究的可重复性,而这对精准医疗和生物医学研究至关重要。本报告强调了液体活检分析前过程中的挑战和变异性,尤其是对肿瘤诊断至关重要的细胞外囊泡 (EV)。MIBlood-EV计划旨在规范分析前变量的报告以及血浆和血清样本的质量控制,以提高EV研究的可重复性。通过提供全面而灵活的报告框架,MIBlood-EV 试图提高 EV 研究的可靠性,促进循证方案的开发,最终推动液体活检研究领域的发展。
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引用次数: 0
A Review of Regulatory Frameworks for Biobanking in Southeast Asia. 东南亚生物银行监管框架回顾。
IF 1.6 4区 生物学 Pub Date : 2024-09-09 DOI: 10.1089/bio.2024.0044
Plebeian B Medina, Subasri Armon, Mohammad Firdaus Bin Abdul Aziz, Io Hong Cheong, Marian P de Leon, Sonia Drobysz, Muhd Haziq Fikry Bin Haji Abdul Momin, Debra Leiolani Garcia, Diah Iskandriati, Zisis Kozlakidis, Lin Cui, Seanghorn Mao, Mary Elizabeth Miranda, Khin Mar Mya, Lingeswran Nallenthiran, Marie Christine Obusan, Kongchay Phimmakong, Phyu Sabai, Channada Saejung, Hans Prakash Sathasivam, Faizatul Lela Binti Jafar, Rodel Jonathan S Vitor, Ailyn M Yabes, Alan B Calaor, Viji Vijayan, Raymond T P Lin

Southeast Asian countries are at the forefront of public health pressures due to a confluence of factors such as population growth, urbanization, environmental pollution, and infectious diseases (re)emergence. Therefore, the ability to be able to conduct research addressing local and regional needs is of paramount importance. As such, biobanking activities, the standardized collection of biological samples, and associated data, developed over the past few decades supporting ongoing biomedical and clinical research, as well as surveillance are of critical importance. However, the regulatory landscape of biobanking is not widely understood and reported, which this narrative review aims to address for the ASEAN member states. It is evident that there are specific regulatory arrangements within each ASEAN member state, which though may be sufficient for the current level of operations, are unlikely to support a regional sharing of biological samples, data, and eventually benefits from the conducted research. Additionally, legacy and often-overlapping regulatory frameworks exist, which raise the need of an eventual consolidation under a single framework. Thus, this field requires further study as well as the creation of viable, practical proposals that would allow for biobanking harmonization and thus the exchange of biological samples and data to be achieved regionally, if not further afield.

由于人口增长、城市化、环境污染和传染病(再次)出现等因素的叠加,东南亚国家正处于公共卫生压力的前沿。因此,能够针对当地和区域需求开展研究至关重要。因此,在过去几十年中发展起来的生物库活动、生物样本和相关数据的标准化收集,对支持正在进行的生物医学和临床研究以及监测至关重要。然而,生物库的监管情况并未得到广泛了解和报告,本叙述性综述旨在为东盟成员国解决这一问题。很明显,每个东盟成员国都有特定的监管安排,虽然这些安排可能足以满足当前的运作水平,但不太可能支持生物样本、数据的区域共享,并最终从所开展的研究中获益。此外,遗留下来的监管框架往往相互重叠,因此需要最终整合到一个单一的框架下。因此,需要对这一领域进行进一步研究,并提出切实可行的建议,以实现生物库的协调统一,从而在地区甚至更远的地方实现生物样本和数据的交换。
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引用次数: 0
Developing Informed Consent for Academic Hospital-Based Biobank Modeling: An Experience from Indonesia. 为学术医院生物库建模制定知情同意书:印度尼西亚的经验。
IF 1.6 4区 生物学 Pub Date : 2024-08-21 DOI: 10.1089/bio.2024.0001
Wika Hartanti, Amirah Ellyza Wahdi, Tika Prasetiawati, Qurry Amanda Izhati, Jajah Fachiroh

Background: Informed consent (IC) for biobank practice is vital to ensure that sample collection, storage, and utilization are ethical. However, the standard practices in biobanking in upper-middle-income countries such as Indonesia often rely on specific consent, leading to restricted sample use and ethical concerns. This article describes the development of an IC model that meets ethical standards and yet is acceptable for biobanking practice in an Indonesian academic hospital. Method: We conducted a study involving Universitas Gadjah Mada (UGM) Biobank Unit and the UGM Academic Hospital, Yogyakarta, Indonesia, between 2019 and 2021. The IC development process consisted of four stages: (1) conceptualization, (2) preparation, (3) pilot, and (4) evaluation. These activities were part of a more extensive pilot study for an academic hospital-based biobank (Medical Biobank for Research in Indonesia (MBRIO) study). Result: We conceptualized a broad consent model, consisting of an information sheet, comprehension test, agreement sheet, and exit survey. We tested and revised the broad consent document to ensure readability, trained 10 consenting staff (1 surgeon and 9 nurses), and then piloted the IC procedure on 24 patients with elective surgery. The evaluation showed that patients understood the information objectively and subjectively. Consenting staff considered the broad consent model acceptable for the academic hospital setting and suggested improvements to increase the readability of information sheets and have more trained staff for better coordination. Conclusion: The IC development process and model consent are ethically sufficient, acceptable and feasible to be implemented in academic hospital-based biobanks in Indonesia adjusted to the business processes.

背景:生物库实践中的知情同意(IC)对于确保样本的收集、储存和使用符合伦理至关重要。然而,在印度尼西亚等中上收入国家,生物库的标准做法往往依赖于特定的同意书,从而导致样本使用受限和伦理问题。本文介绍了印尼一家学术医院如何开发既符合伦理标准又可接受的 IC 模型。方法:我们在 2019 年至 2021 年期间开展了一项涉及印度尼西亚日惹加札马达大学(UGM)生物库单位和加札马达大学学术医院的研究。集成电路开发过程包括四个阶段:(1) 概念化,(2) 准备,(3) 试点和 (4) 评估。这些活动是为基于学术医院的生物库(印度尼西亚医学研究生物库(MBRIO)研究)进行的更广泛试点研究的一部分。研究结果我们构思了一个广泛同意模式,由信息表、理解测试、协议表和退出调查组成。我们测试并修订了广泛同意文件以确保其可读性,培训了 10 名同意人员(1 名外科医生和 9 名护士),然后在 24 名择期手术患者中试行了 IC 程序。评估结果显示,患者客观上和主观上都理解了相关信息。同意人员认为广泛同意模式在学术医院环境中是可以接受的,并提出了改进建议,以提高信息表的可读性,并让更多受过培训的人员更好地进行协调。结论IC开发流程和同意书范本在伦理上是充分、可接受和可行的,可根据业务流程的调整在印度尼西亚以学术医院为基础的生物库中实施。
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引用次数: 0
Evaluation of Ethanolic Extract of Prosopis Farcta and Trehalose on Cryopreserved Goat Epididymal Spermatozoa. 远志的乙醇提取物和三卤糖对低温保存的山羊附睾精子的影响评估
IF 1.6 4区 生物学 Pub Date : 2024-08-21 DOI: 10.1089/bio.2023.0132
Saadoon Homar Ali, Abbas Farshad, Asaad Vaziry, Jalal Rostamzadeh, Farshad Ariyan

The purpose of this study, carried out in two experiments, was to investigate the antioxidant effect of Prosopis farcta in Experiment 1, and trehalose in Experiment 2 in the freezing extender, on the quality of frozen-thawed goat epididymal spermatozoa. Sperm samples were added to based egg-yolk Tris-extender containing experimental treatments. The first experimental treatments included the following: an extender of the control group without additive and extender containing 50, 100, or 150 µg/mL of Prosopis farcta ethanolic extract (PEE1, PEE2, and PEE3, respectively). Treatments of the second experiment include an extender of the control group without additive, an extender containing 100 mM of trehalose (Tr), an extender containing 100 µg/mL PEE2, and 100 µg/mL PEE2 + 100 mM Tr. The results of the first experiment showed that PEE2 compared with the control group led to a significant decrease (p < 0.05) in malondialdehyde (MDA) concentration. Also, PEE1 and PEE2 treatments resulted in a significant increase (p < 0.05) in motility parameters by computer-assisted sperm analysis, and MDA concentrations decreased significantly (p < 0.05) in all treatments compared with the control group. In general, the results of the present experiment showed that Prosopis farcta ethanolic extract at the level of 100 µg/mL was effective in improving the quality of frozen-thawed goat epididymal spermatozoa. Also, a combination of Prosopis farcta ethanolic extract and trehalose can be successful in freezing goat epididymal spermatozoa.

本研究分两个实验进行,目的是研究实验 1 中的远志和实验 2 中的曲阿糖对冷冻解冻的山羊附睾精子质量的抗氧化作用。精子样本被添加到含有实验处理的基于蛋黄的 Tris 扩展剂中。第一种实验处理包括:不含添加剂的对照组扩展剂,以及分别含有 50、100 或 150 µg/mL 的远志乙醇提取物(PEE1、PEE2 和 PEE3)的扩展剂。第二次实验的处理包括对照组不含添加剂的扩展剂、含 100 mM 曲哈糖(Tr)的扩展剂、含 100 µg/mL PEE2 的扩展剂和 100 µg/mL PEE2 + 100 mM Tr。第一个实验的结果表明,与对照组相比,PEE2 使丙二醛(MDA)浓度显著下降(p < 0.05)。此外,通过计算机辅助精子分析,PEE1 和 PEE2 处理使精子活力参数显著增加(p < 0.05),与对照组相比,所有处理的 MDA 浓度均显著降低(p < 0.05)。总之,本实验的结果表明,100 µg/mL 的远志红乙醇提取物能有效改善冷冻解冻山羊附睾精子的质量。此外,远志乙醇提取物与妥尔糖的组合也能成功冷冻山羊附睾精子。
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引用次数: 0
Standard PREanalytical Code Version 4.0. 标准预分析代码 4.0 版。
IF 1.6 4区 生物学 Pub Date : 2024-08-12 DOI: 10.1089/bio.2024.0010
Fay Betsou, Rodrigo Chuaqui, Annemieke De-Wilde, William Grizzle, Michael Kiehntopf, Loes Linsen, William Mathieson, 'Ioana Moldovan, Rocío Aguilar-Quesada, Katheryn Shea, Purnima Singh, Stella Somiari, Demetri Spyropoulos, Juhi Tayal, Riad Tebbakha, Klara Valyi-Nagy, Lalita Wadhwa
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引用次数: 0
期刊
Biopreservation and Biobanking
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