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Vitamin C Synergistically Enhances Protective Effects of Vitamin E Against Preantral Follicle Degeneration of Ovine Vitrified/Warmed Ovarian Tissue. 维生素 C 协同增强维生素 E 对雌性玻璃化/温育卵巢组织前胚泡退化的保护作用
IF 1.6 4区 生物学 Pub Date : 2024-06-21 DOI: 10.1089/bio.2022.0077
Azita Bagheri, Hassan Nazari, Naser Shams-Esfandabadi, Ebrahim Ahmadi, Azita Afzali, Najmeh Davoodian, Sina Nazifi, Sadegh Shirian

This study aimed to evaluate whether the addition of vitamins E and C as two conventional antioxidants improves the cryotolerance of preantral follicles enclosed in ovine ovarian tissue slices. For this purpose, ovarian slices were obtained from abattoired juvenile lambs and randomly distributed to the following groups: fresh, toxicity, vitrified (control), and three treatment groups in two experiments. Vitamin E, vitamin C, or vitamin E + C was added to the vitrification media alone in the first experiment and added to all vitrification, warming, and culture media in the second experiment. Finally, the treated tissues were cultured in vitro for 12 hours. The histological analysis showed that single or combined use of vitamins E and C increases intact preantral follicles in comparison to the control in two experiments (p < 0.05), and simultaneous use of vitamins E and C had a synergistic effect on increasing the percentage of normal preantral follicles in experiment 2 (p < 0.05). Due to the better results in Experiment 2, stromal cell density, antioxidant activity, and molecular evaluation were followed only in this experiment. The vitamin E + C group had higher stromal cell density compared with control group (p < 0.05). Vitamin E strengthened antioxidant capacity compared with the control and vitamin C groups (p < 0.05). This effect was exacerbated when used in combination with vitamin C (p < 0.05). The expression of all evaluated genes (BMP4, BMP15, GDF9, and KITLG) was significantly increased in ovarian tissue treated with vitamin E + C compared with the control group (p < 0.05). This increase was also observed in BMP4, GDF9, and KITLG genes compared with the vitamin C group (p < 0.05). In conclusion, this study revealed the positive effects of vitamins E and C on preantral follicle viability and to some extent a synergistic action of vitamin C on the protective effects of vitamin E against preantral follicle degeneration and increasing antioxidant capacity and development of preantral follicles after ovine ovarian tissue vitrification.

本研究旨在评估添加维生素 E 和维生素 C 这两种常规抗氧化剂是否能提高卵巢组织切片中前胚乳卵泡的低温耐受性。卵巢切片取自宰杀的幼羔,随机分为以下几组:新鲜组、毒性组、维生素组(对照组),以及两个实验中的三个处理组。在第一次实验中,维生素 E、维生素 C 或维生素 E + C 被单独添加到玻璃化培养基中;在第二次实验中,维生素 E、维生素 C 或维生素 E + C 被添加到所有玻璃化、升温和培养基中。最后,将处理过的组织在体外培养 12 小时。组织学分析表明,在两个实验中,与对照组相比,单一或联合使用维生素 E 和 C 可增加完整的前卵泡(P < 0.05),而在实验 2 中,同时使用维生素 E 和 C 对增加正常前卵泡的百分比有协同作用(P < 0.05)。由于实验 2 的结果较好,本实验只对基质细胞密度、抗氧化活性和分子评价进行了跟踪。与对照组相比,维生素 E + C 组的基质细胞密度更高(P < 0.05)。与对照组和维生素 C 组相比,维生素 E 增强了抗氧化能力(p < 0.05)。当维生素 E 与维生素 C 合用时,这种效果会更明显(p < 0.05)。与对照组相比,经维生素 E + C 处理的卵巢组织中所有评估基因(BMP4、BMP15、GDF9 和 KITLG)的表达量均显著增加(p < 0.05)。与维生素 C 组相比,BMP4、GDF9 和 KITLG 基因也有增加(p < 0.05)。总之,本研究揭示了维生素 E 和维生素 C 对卵巢前卵泡活力的积极影响,以及维生素 C 在一定程度上对维生素 E 防止卵巢前卵泡退化的保护作用和提高卵巢组织玻璃化后卵巢前卵泡抗氧化能力和发育的协同作用。
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引用次数: 0
Evaluating Health and Well-Being Returns on Investment in a Cancer Biobank. 评估癌症生物库的健康和福祉投资回报。
IF 1.6 4区 生物学 Pub Date : 2024-06-03 DOI: 10.1089/bio.2024.0014
Clara Marquina, Melanie Lloyd, Wayne Ng, Jonas Hess, Sue Evans, Zanfina Ademi

Objectives: To evaluate the population health returns from investment in the Victorian Cancer Biobank (VCB), a research consortium including five hospital-integrated sample repositories located in Melbourne, Australia. Methods: This economic evaluation assigned monetary values to the health gains attributable to VCB-supported research. These were then compared with the total investment in VCB infrastructure since inception (2006-2022) to determine the return on investment (ROI). A time lag of 40 years was incorporated, recognizing the delay from investment to impact in scientific research. Health gains were therefore measured for the years 2046-2066, with a 3% discount rate applied. Health gains were measured in terms of disability-adjusted life years (DALYs) attributable to VCB-associated research, with monetary cost assigned via the standardized value of a statistical life year (AU$227,000). The age-standardized DALY rate attributable to cancer was modeled for two standpoints (1) extrapolating the current decreasing trajectory and (2) assuming nil future improvement from current rates, with 33% of the difference attributed to scientific innovation. The proportion of the aggregate health gain attributable to VCB-supported research was estimated from the number of VCB-credited scientific publications as a proportion of total oncology publications over the same period. Results: The AU$32,628,016 of public funding invested in VCB activities over the years 2006-2022 is projected to generate AU$84,561,373 in total (discounted) savings. ROI was AU$1.59 for each AU$1 invested. Conclusions: The VCB offers a strong ROI in terms of impacts on health, justifying the expenditure of public funds and supporting the use of biobanks to advance scientific research.

目的:评估投资维多利亚癌症生物库(VCB)对人口健康带来的回报:维多利亚州癌症生物库(VCB)是一个研究联合体,包括位于澳大利亚墨尔本的五个医院综合样本库,目的是评估投资维多利亚州癌症生物库所带来的人口健康回报。方法:这项经济评估为 VCB 支持的研究带来的健康收益分配了货币价值。然后将其与自 VCB 成立以来(2006-2022 年)对 VCB 基础设施的总投资进行比较,以确定投资回报率 (ROI)。考虑到科学研究从投资到产生影响会有 40 年的时间差,因此采用了 40 年的时间差。因此,对 2046-2066 年的健康收益进行了衡量,并采用了 3% 的贴现率。健康收益以可归因于越橘核相关研究的残疾调整生命年(DALYs)来衡量,货币成本按统计生命年的标准化价值(227,000 澳元)分配。可归因于癌症的年龄标准化残疾调整寿命年率从两个角度进行了建模:(1) 推断当前的下降轨迹;(2) 假设与当前的比率相比,未来没有任何改善,其中 33% 的差异归因于科学创新。根据获得维也纳公约与建议委员会认证的科学出版物数量占同期肿瘤学出版物总数的比例,估算出了可归因于维也纳公约与建议委员会支持的研究的总体健康增益比例。结果:2006-2022年期间,投入到《自愿性公约》活动中的32,628,016澳元公共资金预计将产生84,561,373澳元的总节余(贴现)。每投入 1 澳元,投资回报率为 1.59 澳元。结论:从对健康的影响来看,生物库提供了很高的投资回报率,证明了公共资金支出的合理性,并支持利用生物库推动科学研究。
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引用次数: 0
Bolstering Buck Fertility: The Impact of Asparagus racemosus Aqueous Extract on Semen Cryopreservation and Antioxidant Defense System. 提高雄鹿的生育能力:天门冬水提取物对精液冷冻和抗氧化防御系统的影响
IF 1.6 4区 生物学 Pub Date : 2024-06-03 DOI: 10.1089/bio.2023.0117
Chetna Gangwar, Ashok Kumar, K Gururaj, Anshuman Kumar, Salauddin Qureshi, Manish Kumar, Anil Kumar Mishra, R Ranjan

Importance of Study: Semen cryopreservation results in sperm damage due to lipid peroxidation or oxidative stress, leading to a decrease in conception rate. The sperm damage during cryopreservation can be minimized with the use of suitable antioxidant supplements in semen diluent. Some herbs have potent antioxidant potential and can be used in semen diluent to protect the spermatozoa. Objective: Hence, the investigation was planned to evaluate the effect of Asparagus racemosus (A. racemosus) aqueous extract on buck semen quality during cryopreservation. Methodology: In the current study, semen was collected from eight Sirohi bucks, and from each buck, 8 ejaculates were collected. Good-quality semen samples were pooled during each collection. Pooled semen samples were then divided into four equal parts and diluted in TRIS buffer containing different concentrations of A. racemosus aqueous extract (different groups, i.e., G I -5 mg, G II -2.5 mg, G III -1.25 mg, and G IV -0 mg of A. racemosus aqueous extract in 1 mL TRIS buffer). All the diluted semen samples were kept at equilibration temperature (5°C) for 2 hours and then cryopreserved by the manual method. Semen samples were evaluated for various sperm characteristics and antioxidant status before and after cryopreservation. Results: Asparagus racemosus aqueous extract showed significant (p < 0.05) enhancement of sperm viability, sperm motility, acrosomal integrity, and plasma membrane integrity, whereas it reduced sperm abnormality. Furthermore, in the experimental groups, the antioxidant gene expression was found to be increased compared to that of the treatment group. G III (p < 0.05) showed significantly better results in terms of sperm viability, sperm motility, acrosomal integrity, and plasma membrane integrity. Conclusion: Asparagus racemosus aqueous extract has the antioxidant potential to protect buck spermatozoa during semen cryopreservation.

研究的重要性:精液冷冻会导致精子因脂质过氧化或氧化应激而受损,从而降低受孕率。在精液稀释液中添加适当的抗氧化剂,可将冷冻保存过程中的精子损伤降至最低。一些草药具有强大的抗氧化潜力,可用于精液稀释液中以保护精子。目的:因此,本研究计划评估天门冬水提取物对冷冻保存期间雄鹿精液质量的影响。研究方法在本研究中,从 8 头 Sirohi 公鹿身上采集精液,每头公鹿采集 8 次射精。在每次采集过程中,都会将质量较好的精液样本集中起来。然后将汇集的精液样本分成四等份,并在含有不同浓度消旋山豆根水提取物的 TRIS 缓冲液中稀释(不同组别,即在 1 毫升 TRIS 缓冲液中加入 G I -5 毫克、G II -2.5 毫克、G III -1.25 毫克和 G IV -0 毫克的消旋山豆根水提取物)。将所有稀释后的精液样本在平衡温度(5°C)下保存 2 小时,然后用人工方法进行冷冻保存。对精液样本在冷冻保存前后的各种精子特征和抗氧化状态进行评估。结果天门冬水提取物能显著提高精子活力、精子运动能力、顶体完整性和质膜完整性(p < 0.05),同时减少精子畸形。此外,与治疗组相比,实验组的抗氧化基因表达量有所增加。G III(p < 0.05)在精子存活率、精子活力、顶体完整性和质膜完整性方面的效果明显更好。结论芦笋水提取物具有抗氧化潜力,可在精液冷冻保存过程中保护降压精子。
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引用次数: 0
Biobanking Legislation in Spain: Advancing or Undermining Its Ethical Values? 西班牙的生物银行立法:西班牙的生物银行立法:促进还是削弱其伦理价值?
IF 1.6 4区 生物学 Pub Date : 2024-06-01 Epub Date: 2024-01-18 DOI: 10.1089/bio.2023.0107
Inmaculada de Melo-Martín, Eva Ortega-Paíno

Biobanks are important resources for improving public health and individual care. Some legal frameworks can be more or less conducive to advancing the potential benefits of biobanks. The purpose of this article is to assess biobanking legislation and practices in Spain to determine how well they fare in such a regard. We focus here on some of the primary ethical values that ground relevant legislation and that we believe are consistent with promoting biobanking benefits: the value of scientific research; efficient use of scarce resources; and respect for the dignity of donors. We argue that although Spanish regulations advance these values in important ways, they also have provisions that undermine them and thus risk limiting the potential benefits of biobanks. We offer some suggestions for improvement.

生物库是改善公共卫生和个人护理的重要资源。一些法律框架可能或多或少地有利于促进生物库的潜在效益。本文旨在评估西班牙的生物库立法和实践,以确定它们在这方面的表现如何。在此,我们将重点放在作为相关立法基础的一些主要伦理价值观上,我们认为这些价值观与促进生物库的益处是一致的:科学研究的价值、稀缺资源的有效利用以及对捐献者尊严的尊重。我们认为,尽管西班牙的法规以重要的方式推进了这些价值观,但也有一些条款破坏了这些价值观,从而有可能限制生物库的潜在效益。我们提出了一些改进建议。
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引用次数: 0
Dare to Dream-Building the Future of Biobanking: A Summary of the ISBER Annual Meeting, April 9-12, 2024. 敢于梦想--打造生物银行的未来:2024年4月9日至12日ISBER年会摘要。
IF 1.6 4区 生物学 Pub Date : 2024-06-01 DOI: 10.1089/bio.2024.0073
Cassandra Griffin, Gregory Grossman, Amanda Moors
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引用次数: 0
Increase in Serum Potassium Levels After Refrigerated Storage: A Component of Blood Clot Contaminates the Serum Layer Over the Separator Gel. 冷藏后血清钾水平升高:血凝块的一种成分污染了分离凝胶上的血清层。
IF 1.6 4区 生物学 Pub Date : 2024-06-01 Epub Date: 2023-11-09 DOI: 10.1089/bio.2022.0217
Kohsuke Yoshida, Hiromi Tani, Sae Nobuhara, Shinji Yamamoto

Objectives: The aim of this study was to determine the cause of elevated serum potassium levels when blood collection tubes containing separating gel are stored under refrigeration. Methods: Fifty-seven hospitalized patients and 11 healthy volunteers were recruited. Venous blood samples were obtained using Insepac II, Neotube, and Venoject® II, without anticoagulant. After centrifugation under different processing conditions, the capped tubes were stored at 4°C without aliquoting, and serum potassium levels were measured for up to 14 days. Correlation between the increase in potassium levels and blood cell counts was assessed. Furthermore, serum was replaced with a saline solution and potassium levels were determined after refrigeration. Results: Refrigerated samples stored in Insepac II tubes had significantly higher serum potassium levels on day 14 than on the day of blood collection. The increase in serum potassium levels was positively correlated with the number of red blood cells, but not white blood cells and platelets in venous blood. Furthermore, potassium levels were elevated when serum was replaced with a saline solution. Using Venoject II, which has a larger tube diameter and thicker separating gel than those of Insepac II and Neotube, did not increase serum potassium levels after storage. Increase in the serum potassium level was markedly suppressed by centrifugation at 2330 g for 15 minutes relative to other processing conditions. Conclusions: Potassium levels increase when serum is refrigerated in collection tubes containing separating gel. This can be attributed to contamination of the serum layer by blood cell components beyond the separating gel.

目的:本研究的目的是确定含有分离凝胶的采血管在冷藏条件下储存时血清钾水平升高的原因。方法:招募57名住院患者和11名健康志愿者。使用Insepac II、Neotube和Venoject®II获得静脉血样,不含抗凝剂。在不同的处理条件下离心后,将带帽的试管在4°C下储存,不等分,并测量血清钾水平长达14天。评估了钾水平升高与血细胞计数之间的相关性。此外,用盐水溶液代替血清,并在冷藏后测定钾水平。结果:储存在Insepac II试管中的冷藏样品在第14天的血清钾水平显著高于采血当天。血清钾水平的增加与静脉血中红细胞的数量呈正相关,但与白细胞和血小板的数量无关。此外,当用盐水溶液代替血清时,钾水平升高。与Insepac II和Neotube相比,Venoject II具有更大的管径和更厚的分离凝胶,在储存后没有增加血清钾水平。相对于其他处理条件,通过以2330g离心15分钟显著抑制血清钾水平的增加。结论:当血清在含有分离凝胶的收集管中冷藏时,钾水平会升高。这可归因于分离凝胶之外的血细胞成分对血清层的污染。
{"title":"Increase in Serum Potassium Levels After Refrigerated Storage: A Component of Blood Clot Contaminates the Serum Layer Over the Separator Gel.","authors":"Kohsuke Yoshida, Hiromi Tani, Sae Nobuhara, Shinji Yamamoto","doi":"10.1089/bio.2022.0217","DOIUrl":"10.1089/bio.2022.0217","url":null,"abstract":"<p><p><b><i>Objectives:</i></b> The aim of this study was to determine the cause of elevated serum potassium levels when blood collection tubes containing separating gel are stored under refrigeration. <b><i>Methods:</i></b> Fifty-seven hospitalized patients and 11 healthy volunteers were recruited. Venous blood samples were obtained using Insepac II, Neotube, and Venoject<sup>®</sup> II, without anticoagulant. After centrifugation under different processing conditions, the capped tubes were stored at 4°C without aliquoting, and serum potassium levels were measured for up to 14 days. Correlation between the increase in potassium levels and blood cell counts was assessed. Furthermore, serum was replaced with a saline solution and potassium levels were determined after refrigeration. <b><i>Results:</i></b> Refrigerated samples stored in Insepac II tubes had significantly higher serum potassium levels on day 14 than on the day of blood collection. The increase in serum potassium levels was positively correlated with the number of red blood cells, but not white blood cells and platelets in venous blood. Furthermore, potassium levels were elevated when serum was replaced with a saline solution. Using Venoject II, which has a larger tube diameter and thicker separating gel than those of Insepac II and Neotube, did not increase serum potassium levels after storage. Increase in the serum potassium level was markedly suppressed by centrifugation at 2330 <i>g</i> for 15 minutes relative to other processing conditions. <b><i>Conclusions:</i></b> Potassium levels increase when serum is refrigerated in collection tubes containing separating gel. This can be attributed to contamination of the serum layer by blood cell components beyond the separating gel.</p>","PeriodicalId":55358,"journal":{"name":"Biopreservation and Biobanking","volume":" ","pages":"235-241"},"PeriodicalIF":1.6,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"72016148","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Effects of Ferulic Acid, Tryptophan, and L-Glutamine on the Cryopreservation of Mouse Spermatozoa. 阿魏酸、色氨酸和 L-谷氨酰胺对小鼠精子冷冻保存的影响
IF 1.6 4区 生物学 Pub Date : 2024-06-01 Epub Date: 2023-12-26 DOI: 10.1089/bio.2023.0067
Gökhan Koçak, Cengiz Yildiz

In this study, the effects of ferulic acid (0.1, 1, ve 10 mM), tryptophan (5, 25, ve 50 mM), and L-glutamine (10, 50, ve 100 mM) at different doses added to 18% raffinose + 3% skimmed milk powder sperm extender on the freezing of mouse spermatozoa in liquid nitrogen were investigated. The combination of 18% raffinose + 3% skimmed milk powder without additives was used as the control group. Frozen spermatozoa were thawed in a 37°C water bath for 30 seconds. After freeze-thawing, motility, dead spermatozoa ratio, plasma membrane integrity, abnormal acrosome ratio, motility endurance (for 4 hours), and cell apoptosis tests were performed in Human Tubal Fluid (HTF). Compared with the control group after freezing and thawing, the highest motility and plasma membrane integrity were obtained in the 10 mM L-glutamine group with 56.6% ± 2.11% and 77.8% ± 0.87%, respectively (p < 0.05). In addition, when compared to the control group, the lowest rate of dead spermatozoa and abnormal acrosome was found in the 10 mM L-glutamine group as 26.0% ± 1.46% and 6.3% ± 1.09%, respectively (p < 0.05). The highest motility values for spermatozoa endurance were determined in the 10 and 50 mM L-glutamine groups up to the 4th hour compared to the control group (p < 0.05). In the evaluation of apoptosis in semen samples, there was no significant difference between the control, 0.1 mM ferulic acid, and 10 mM L-glutamine groups (p > 0.05). As a result, it was determined that the addition of 10 mM L-glutamine to the spermatozoa extender increased the motility, viable spermatozoa, functional membrane integrity, intact acrosome ratios, or motility endurance after freeze-thawing and could be used successfully in the freezing extender of mouse spermatozoa.

本研究探讨了不同剂量的阿魏酸(0.1、1、10 mM)、色氨酸(5、25、50 mM)和左旋谷氨酰胺(10、50、100 mM)添加到18%棉子糖+3%脱脂奶粉精子延长剂中对小鼠精子在液氮中冷冻的影响。18%棉子糖+3%脱脂奶粉不加添加剂的组合作为对照组。冷冻精子在 37°C 水浴中解冻 30 秒。冻融后,在人类输卵管液(HTF)中进行运动能力、死精子比率、质膜完整性、异常顶体比率、运动耐力(4 小时)和细胞凋亡测试。与冷冻和解冻后的对照组相比,10 mM L-谷氨酰胺组的运动能力和质膜完整性最高,分别为 56.6% ± 2.11% 和 77.8% ± 0.87%(p p p > 0.05)。因此,可以确定在精子延长剂中添加 10 mM L-谷氨酰胺可提高冻融后的运动能力、存活精子数、功能膜完整性、完整顶体比率或运动耐力,并可成功用于小鼠精子的冷冻延长剂中。
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引用次数: 0
Biospecimen Qualification in a Clinical Biobank of Urological Diseases. 泌尿系统疾病临床生物库的生物标本鉴定。
IF 1.6 4区 生物学 Pub Date : 2024-06-01 Epub Date: 2023-10-25 DOI: 10.1089/bio.2022.0190
Olga Kofanova, Sangita Paul, Achilleas Pexaras, Camille Bellora, Ala Petersons, Margaux Schmitt, Mohamad Baker Berjaoui, Yazan Qaoud, Miran Kenk, Heidi Wagner, Neil Fleshner, Fay Betsou

Development of novel biomarkers for diagnosis of disease and assessment of treatment efficacy utilizes a wide range of biospecimens for discovery research. The fitness of biospecimens for the purpose of biomarker development depends on the clinical characteristics of the donor and on a number of critical and potentially uncontrolled pre-analytical variables. Pre-analytical factors influence the reliability of the biomarkers to be analyzed and can seriously impact analytic outcomes. Sample quality stratification assays and tools can be utilized by biorepositories to minimize bias resulting from samples' inconsistent quality. In this study, we evaluated the quality of biobanked specimens by comparing analytical outcomes at 1, 5, and 10 years after collection. Our results demonstrate that currently available assays and tools can be used by biobank laboratories to support objective biospecimen qualification. We have established a workflow to monitor the quality of different types of biospecimens and, in this study, present the results of a qualification exercise applied to fluid samples and their derivatives in the context of urological diseases.

用于疾病诊断和治疗效果评估的新型生物标志物的开发利用了广泛的生物样本进行发现研究。生物样本用于生物标志物开发的适合性取决于供体的临床特征以及一些关键的和可能不受控制的预分析变量。预分析因素影响待分析生物标志物的可靠性,并可能严重影响分析结果。生物保藏中心可以利用样品质量分层分析和工具,最大限度地减少因样品质量不一致而产生的偏差。在这项研究中,我们通过比较采集后1年、5年和10年的分析结果来评估生物库标本的质量。我们的结果表明,生物库实验室可以使用目前可用的分析和工具来支持客观的生物样本鉴定。我们建立了一个工作流程来监测不同类型生物样本的质量,并在本研究中,介绍了在泌尿系统疾病背景下应用于流体样本及其衍生物的资格鉴定结果。
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引用次数: 0
Call for Papers: Biobanks and Biorepositories in Latin America: Challenges and Opportunities. 征集论文:拉丁美洲的生物库和生物信息库:挑战与机遇。
IF 1.6 4区 生物学 Pub Date : 2024-06-01 DOI: 10.1089/bio.2024.47934.cfp
Antonio Hugo J F M Campos, Maria Teresa G de Dávila
{"title":"Call for Papers: Biobanks and Biorepositories in Latin America: Challenges and Opportunities.","authors":"Antonio Hugo J F M Campos, Maria Teresa G de Dávila","doi":"10.1089/bio.2024.47934.cfp","DOIUrl":"https://doi.org/10.1089/bio.2024.47934.cfp","url":null,"abstract":"","PeriodicalId":55358,"journal":{"name":"Biopreservation and Biobanking","volume":"22 3","pages":"189-190"},"PeriodicalIF":1.6,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141452159","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Relationship Between Amplicon Size and Heat Conditions in Polymerase Chain Reaction Detection of DNA Degraded by Autoclaving. 聚合酶链反应检测高压灭菌降解DNA中扩增子大小与加热条件的关系。
IF 1.6 4区 生物学 Pub Date : 2024-06-01 Epub Date: 2023-10-23 DOI: 10.1089/bio.2023.0021
Naoki Harikai, Yuki Takada, Misaki Saito, Kazumasa Zaima, Kazufusa Shinomiya

This study examined the influence of heat exposure on DNA samples during polymerase chain reaction (PCR) detection. In this study, λDNA samples, as model DNA, were exposed to 105°C for 3-90 minutes or to 105°C-115°C for 15 minutes by autoclaving. The exposed samples were subjected to real-time PCR using nine primer sets with amplicon sizes of 45-504 bp. Regarding DNA samples exposed to 105°C by autoclaving, the data showed negative correlations between the logarithm of λDNA concentration (log λDNA) calculated using real-time PCR and exposure duration and a good relationship between the slope of the regression line and amplicon size. Regarding λDNA samples exposed to heat for 15 minutes, the data showed negative correlations between the log λDNA and exposure temperature and a good relationship between the slope of the regression line and amplicon size. These results showed that the equations used in this study could predict the degree of degradation in λDNA samples by autoclaving, and the PCR detection levels of the DNA at each amplicon size.

本研究检测了聚合酶链式反应(PCR)检测过程中热暴露对DNA样本的影响。在本研究中,λDNA样品作为模型DNA,通过高压灭菌暴露于105°C下3-90分钟或105°C-115°C下15分钟。使用扩增子大小为45-504的九个引物组对暴露的样品进行实时PCR bp。关于通过高压灭菌暴露于105°C的DNA样本,数据显示,使用实时PCR计算的λDNA浓度的对数(logλDNA)与暴露时间呈负相关,回归线的斜率与扩增子大小之间存在良好关系。关于暴露于高温15分钟的λDNA样本,数据显示logλDNA与暴露温度之间呈负相关,回归线的斜率与扩增子大小之间呈良好关系。这些结果表明,本研究中使用的方程可以预测高压灭菌后λDNA样品的降解程度,以及每个扩增子大小下DNA的PCR检测水平。
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引用次数: 0
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Biopreservation and Biobanking
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