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A comparative study between normal electrocardiogram signal and those of some cardiac arrhythmias based on McSharry mathematical model. 基于McSharry数学模型的心律失常与正常心电图信号的比较研究。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-06-01 Epub Date: 2019-04-02 DOI: 10.1007/s13246-019-00752-7
Pascalin Tiam Kapen, Serge Urbain Kouam Kouam, Ghislain Tchuen

In this paper, synthetic electrocardiogram signals (SECG) of eight cardiac arrhythmias (sinus bradycardia, junctional bradycardia, tachycardia, flutter, atrial extrasystole, ventricular extrasystole, left branch block and right branch block) are obtained numerically by solving the McSharry mathematical model (2003) based on three coupled ordinary differential equations with the fourth-order Runge-Kutta method. They are compared with normal electrocardiogram signal. Indeed, visual analysis of a section of electrocardiogram (ECG) signals of these arrhythmias was used to suggest suitable values for the parameters in the McSharry mathematical model. Results from numerical simulation showed a good agreement between the simulation results and the real cardiac arrhythmias ECG signals.

本文采用四阶龙格-库塔法求解McSharry数学模型(2003),对8种心律失常(窦性心动过缓、结性心动过缓、心动过速、扑动、房性心动过速、室性心动过速、左支传导阻滞、右支传导阻滞)的合成心电图信号(SECG)进行了数值计算。将其与正常心电图信号进行比较。事实上,这些心律失常的心电图(ECG)信号的可视化分析被用来为McSharry数学模型中的参数提供合适的值。数值模拟结果表明,模拟结果与实际心电信号吻合较好。
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引用次数: 5
A Monte Carlo study of pinhole collimated Cerenkov luminescence imaging integrated with radionuclide treatment. 结合放射性核素治疗的针孔准直切伦科夫发光成像的蒙特卡罗研究。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-06-01 Epub Date: 2019-03-04 DOI: 10.1007/s13246-019-00744-7
Changran Geng, Yao Ai, Xiaobin Tang, Diyun Shu, Chunhui Gong, Fada Guan

Cerenkov luminescence imaging (CLI) is an emerging optical imaging technique, which has been widely investigated for biological imaging. In this study, we proposed to integrate the CLI technique with the radionuclide treatment as a "see-and-treat" approach, and evaluated the performance of the pinhole collimator-based CLI technique. The detection of Cerenkov luminescence during radionuclide therapy was simulated using the Monte Carlo technique for breast cancer treatment as an example. Our results show that with the pinhole collimator-based configuration, the location, size and shape of the tumors can be clearly visualized on the Cerenkov luminescence images of the breast phantom. In addition, the CLI of multiple tumors can reflect the relative density of radioactivity among tumors, indicating that the intensity of Cerenkov luminescence is independent of the size and shape of a tumor. The current study has demonstrated the high-quality performance of the pinhole collimator-based CLI in breast tumor imaging for the "see-and-treat" multi-modality treatment.

切伦科夫发光成像(CLI)是一种新兴的光学成像技术,在生物成像领域得到了广泛的研究。在这项研究中,我们提出将CLI技术与放射性核素治疗相结合,作为一种“观察和治疗”的方法,并评估了基于针孔准直仪的CLI技术的性能。以蒙特卡罗技术为例,模拟了放射性核素治疗过程中切伦科夫发光的检测。研究结果表明,基于针孔准直器的结构可以在乳房幻象的切伦科夫发光图像上清晰地显示肿瘤的位置、大小和形状。此外,多发肿瘤的CLI可以反映肿瘤间放射性的相对密度,表明切伦科夫发光强度与肿瘤的大小和形状无关。目前的研究已经证明了针孔准直仪在乳腺肿瘤成像中的高质量表现,用于“观察和治疗”的多模式治疗。
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引用次数: 3
Leonardo DaVinci's contributions to medical physics and biomedical engineering: celebrating the life of a 'Polymath'. 列奥纳多·达芬奇对医学物理学和生物医学工程的贡献:颂扬一位“博学者”的一生。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-06-01 DOI: 10.1007/s13246-019-00757-2
Tomas Kron, Prem Krishnan
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引用次数: 3
Dosimetric validation of the Theragenics AgX-100® I-125 seed for ROPES eye plaque brachytherapy. Theragenics AgX-100®I-125种子用于ROPES眼斑近距离治疗的剂量学验证。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-06-01 Epub Date: 2019-05-13 DOI: 10.1007/s13246-019-00761-6
Claire Pagulayan, Soo Min Heng, Stephanie Corde

With the discontinued distribution of the I-125 Oncura Onco seed (model 6711), the Theragenics AgX100® I-125 seeds were considered as a suitable alternative for eye plaque brachytherapy as their physical properties matched the requirements for use with the ROPES eye plaques. The purpose of this study aims at validating the dosimetry of the AgX-100 loaded ROPES plaques (11 mm diameter, 15 mm diameter with flange, 15 mm diameter with notch, 18 mm diameter) and assess the differences with the discontinued I-125 6711 model. To independently verify the plaque dosimetry, the brachytherapy module of RADCALC® version 6.2.3.6 was commissioned for the new AgX-100 I-125 seed using the published AAPM TG43 data from the literature. Experimental dosimetry verification was performed using EBT3 Gafchromic™ film and TLD-100 micro-cubes in a specially designed Solid Water® phantom. Both RADCALC® and film confirmed the dosimetry calculated by Plaque Simulator (PS) version 6.4.6 The dose calculated by PS agrees with RADCALC® to within 2% for depths of 1-15 mm for the 4 available ROPES plaques. The dosimetric measurements agreed with the calculations of PS for clinically relevant depths (4 mm to 6 mm) within the evaluated uncertainties of 4.7% and 7.2% for EBT3 film and TLDs respectively. The AgX-100 I-125 seed was a suitable replacement for the 6711 I-125 seed. Due to the introduction of the stainless-steel backscatter factor in PS v6.4.6, the department has decided to report both the homogenous dose and heterogeneity corrected dose for each eye plaque patient.

随着I-125 Oncura Onco种子(型号6711)的停止销售,Theragenics AgX100®I-125种子被认为是眼斑近距离治疗的合适替代品,因为它们的物理特性符合使用ROPES眼斑的要求。本研究的目的是验证AgX-100负载的ROPES斑块(11毫米直径,15毫米直径带法兰,15毫米直径带缺口,18毫米直径)的剂量学,并评估其与已停产的I-125 6711模型的差异。为了独立验证斑块剂量学,使用文献中已发表的AAPM TG43数据,为新的AgX-100 I-125种子委托了RADCALC®版本6.2.3.6的近距离治疗模块。实验剂量学验证使用EBT3 Gafchromic™薄膜和TLD-100微立方体在专门设计的Solid Water®模体中进行。RADCALC®和film均证实了斑块模拟器(PS) 6.4.6版计算的剂量。对于4个可用的ROPES斑块,PS计算的剂量与RADCALC®一致,在1- 15mm深度范围内,剂量在2%以内。剂量学测量结果与临床相关深度(4mm至6mm)的PS计算结果一致,评估的不确定度分别为4.7%和7.2%。AgX-100 I-125种子是6711 I-125种子的合适替代品。由于PS v6.4.6中引入了不锈钢后向散射因子,科室决定同时报告每个眼斑患者的均匀剂量和非均匀校正剂量。
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引用次数: 4
Assessment of the accuracy of truebeam intrafraction motion review (IMR) system for prostate treatment guidance. 真光束屈光度运动回顾(IMR)系统用于前列腺治疗指导的准确性评估。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-06-01 Epub Date: 2019-05-13 DOI: 10.1007/s13246-019-00760-7
Guneet Kaur, Joerg Lehmann, Peter Greer, John Simpson

Intrafraction motion review (IMR), a real-time 2D, motion management feature of the Varian Truebeam™ incorporates triggered imaging, automatic fiducial marker detection and automatic beam hold. With the increasing adoption of high dose per fraction stereotactic body radiotherapy (SBRT) this system provides a potential means to ensure treatment accuracy. The goal of this study was therefore to investigate and quantify key performance characteristics of IMR for prostate treatment guidance. Phantom experiments were performed with a custom Computerized Imaging Reference Systems, Inc (CIRS) pelvis phantom with implanted gold seeds and the Hexamotion™ 5D motion platform. The system accuracy was assessed statically and under typical prostate motion trajectories. The IMR functionality and marker detectability was tested under different anatomical conditions and with different imaging acquisition modes. Imaging dose for triggered imaging modes was determined using an ionisation chamber based on IPEMB dose calibration protocol for kV energies. For zero displacement, the IMR demonstrated submillimeter agreement with the known position. Similarly, dynamic motion differences between the IMR reported position and 2D trajectory displacement were within 1 mm. Static displacement in the anterior direction was reported by IMR as sinusoidal motion on the x-axis (kV angle). The 2D nature of IMR limits the ability to detect motion out of the plane of the kV image detector. Using typical clinical imaging settings, imaging dose determined at the patient surface was 2.58 mGy/frame and the corresponding IMR displayed dose was 2.63 mGy/frame. The methodology used was able to quantify the accuracy of the IMR system. The IMR was able to accurately and consistently report fiducial positions within the limitations inherent of a 2D system. IMR is fully integrated with the Truebeam system with an easy to use and efficient workflow and is clinically beneficial especially within the context of SBRT.

偏移内运动检查(IMR)是瓦里安Truebeam™的实时2D运动管理功能,包含触发成像、自动基准标记检测和自动光束保持。随着越来越多地采用高剂量/分数立体定向放射治疗(SBRT),该系统提供了一种确保治疗准确性的潜在手段。因此,本研究的目的是调查和量化IMR的关键性能特征,以指导前列腺治疗。幻影实验采用自定义的计算机成像参考系统公司(CIRS)骨盆幻影植入金粒子和Hexamotion™5D运动平台进行。系统的精度在静态和典型前列腺运动轨迹下进行评估。在不同的解剖条件和不同的成像采集方式下,测试了IMR的功能和标记可检测性。触发成像模式的成像剂量使用基于ippemb剂量校准方案的电离室确定kV能量。对于零位移,IMR显示出与已知位置的亚毫米级一致性。同样,IMR报告位置与2D轨迹位移之间的动态运动差异在1mm以内。前方向的静态位移被IMR报告为x轴上的正弦运动(kV角)。IMR的二维特性限制了检测kV图像检测器平面外运动的能力。在典型的临床成像设置下,在患者表面确定的成像剂量为2.58 mGy/帧,相应的IMR显示剂量为2.63 mGy/帧。所使用的方法能够量化IMR系统的准确性。在2D系统固有的限制下,IMR能够准确和一致地报告基准位置。IMR与Truebeam系统完全集成,具有易于使用和高效的工作流程,特别是在SBRT的背景下,在临床上是有益的。
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引用次数: 15
Influence of normalization and color features on super-pixel classification: application to cytological image segmentation. 归一化和颜色特征对超像素分类的影响:在细胞学图像分割中的应用。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-06-01 Epub Date: 2019-03-04 DOI: 10.1007/s13246-019-00735-8
Mohammed El Amine Bechar, Nesma Settouti, Mostafa El Habib Daho, Mouloud Adel, Mohammed Amine Chikh

Super-pixel feature extraction is a key problem to get an acceptable performance in color super-pixel classification. Given a color feature extraction problem, it is necessary to know which is the best approach to solve this problem. In the current work, we're interested in the challenge of nucleus and cytoplasm automatic recognition in the cytological image. We propose an automatic process for white blood cells (WBC) segmentation using super-pixel classification. The process is divided into five steps. In first step, the color normalization is calculated. The super-pixels generation by Simple Linear Iterative Clustering algorithm is performed in the second step. In third step, the color property is used to achieve illumination invariance. In fourth step, color features are calculated on each super-pixel. Finally, supervised learning is realized to classify each super-pixel into nucleus and cytoplasm region. The present work rallied an exhaustive statistical evaluation of a very wide variety of the color super-pixel classification, with height normalization methods, four-color spaces and four feature extraction techniques. Normalization and color spaces slightly increase the average accuracy of super-pixel classification. Our experiments based to statistical comparison allow to conclude that comprehensive gray world normalized normalization is better than without normalization for super-pixel classification achieving the first positions in the Friedman ranking. RGB space is the best color spaces to be used in super-pixel feature extraction for nucleus and cytoplasm segmentation. For feature extraction, the learning methods work better on the first order statistics features for the automatic WBC segmentation.

在彩色超像素分类中,超像素特征提取是获得满意分类效果的关键问题。给定一个颜色特征提取问题,有必要知道哪种方法是解决这个问题的最佳方法。在目前的工作中,我们对细胞学图像中核和细胞质自动识别的挑战感兴趣。我们提出了一种使用超像素分类的白细胞(WBC)自动分割过程。这个过程分为五个步骤。第一步,计算颜色归一化。第二步采用简单线性迭代聚类算法生成超像素。第三步,利用颜色属性实现光照不变性。第四步,在每个超像素上计算颜色特征。最后,实现监督学习,将每个超像素划分为细胞核和细胞质区域。本研究利用高度归一化方法、四色空间和四种特征提取技术,对各种颜色超像素分类进行了详尽的统计评估。归一化和色彩空间稍微提高了超像素分类的平均精度。我们基于统计比较的实验可以得出结论,对于超像素分类,综合灰色世界归一化归一化优于不归一化,在弗里德曼排名中排名第一。RGB空间是用于核和细胞质分割的超像素特征提取的最佳颜色空间。在特征提取方面,学习方法对一阶统计特征的提取效果较好,可用于WBC自动分割。
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引用次数: 5
A review and analysis of stereotactic body radiotherapy and radiosurgery of patients with cardiac implantable electronic devices. 心脏植入式电子装置的立体定向放射治疗与放射外科治疗综述与分析。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-06-01 Epub Date: 2019-04-04 DOI: 10.1007/s13246-019-00751-8
Hossein Aslian, Tomas Kron, Francesco Longo, Roya Rad, Mara Severgnini

The implementation of stereotactic body radiation therapy (SBRT) and stereotactic radiosurgery (SRS) has greatly increased due to its convenience and advantages from perspectives ranging from radiobiology to radio physics. Because SBRT/SRS delivers high doses in few fractions, precise dose delivery to target volumes and sufficient sparing of adjacent organs at risk (OARs) are required. Achieving these conflicting objectives is challenging for all patients receiving SBRT/SRS and may be particularly challenging when SBRT/SRS is adopted for treating patients with cardiac implantable electronic devices (CIEDs) because cumulative doses in CIEDs must be limited. Published research considering the different aspects of stereotactic treatment in patients with CIEDs was reviewed to summarise their findings in the following sections: (I) conventional linear accelerator (linac)-based SBRT and SRS; (II) CyberKnife, Gamma-Knife, VERO and helical tomotherapy SBRT and SRS; and (III) proton therapy. A total of 65 patients who had CIEDs and underwent SRS, SBRT, or SABR treatments were identified in the reviewed studies. The functionality of the CIEDs was assessed for 58 patients. Of those, CIED malfunctions (such as data loss, mode change, and inappropriate shock) were reported in four patients (6.89%). This review highlights the available sparse information in the literature by posing questions for future research.

立体定向放射治疗(SBRT)和立体定向放射外科(SRS)由于其从放射生物学到放射物理学的方便性和优势而大大增加了实施。由于SBRT/SRS以少量组分提供高剂量,因此需要精确地向靶体积提供剂量并充分保留邻近的危险器官(OARs)。对于所有接受SBRT/SRS的患者来说,实现这些相互矛盾的目标是具有挑战性的,当采用SBRT/SRS治疗心脏植入式电子装置(cied)患者时尤其具有挑战性,因为cied的累积剂量必须受到限制。本文回顾了已发表的考虑立体定向治疗在cied患者中的不同方面的研究,总结了他们的发现,分为以下几部分:(I)基于传统直线加速器(linac)的SBRT和SRS;(II)射波刀、伽玛刀、VERO和螺旋断层治疗SBRT和SRS;(三)质子治疗。在回顾的研究中,共有65例cied患者接受了SRS、SBRT或SABR治疗。对58例患者的cied功能进行了评估。其中,4例(6.89%)患者报告了CIED故障(如数据丢失、模式改变和不适当的电击)。这篇综述强调了文献中可用的稀疏信息,并为未来的研究提出了问题。
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引用次数: 9
Second malignant neoplasm risk after craniospinal irradiation in X-ray-based techniques compared to proton therapy. 与质子治疗相比,x射线照射后颅脊柱恶性肿瘤的风险。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-03-01 Epub Date: 2019-02-06 DOI: 10.1007/s13246-019-00731-y
Vasanthan Sakthivel, Kadirampatti M Ganesh, Craig McKenzie, Raghavendiran Boopathy, Jothybasu Selvaraj

Cranio-spinal irradiation (CSI) is widely used for treating medulloblastoma cases in children. Radiation-induced second malignancy is of grave concern; especially in children due to their long-life expectancy and higher radiosensitivity of tissues at young age. Several techniques can be employed for CSI including 3DCRT, IMRT, VMAT and tomotherapy. However, these techniques are associated with higher risk of second malignancy due to the physical characteristics of photon irradiation which deliver moderately higher doses to normal tissues. On the other hand, proton beam therapy delivers substantially lesser dose to normal tissues due to the sharp dose fall off beyond Bragg peak compared to photon therapy. The aim of this work is to quantify the relative decrease in the risk with proton therapy compared to other photon treatments for CSI. Ten anonymized patient DICOM datasets treated previously were selected for this study. 3DCRT, IMRT, VMAT, tomotherapy and proton therapy with pencil beam scanning (PBS) plans were generated. The prescription dose was 36 Gy in 20 fractions. PBS was chosen due to substantially lesser neutron dose compared to passive scattering. The age of the patients ranged from 3 to 12 with a median age of eight with six male and four female patients. Commonly used linear and a mechanistic doseresponse models (DRM) were used for the analyses. Dose-volume histograms (DVH) were calculated for critical structures to calculate organ equivalent doses (OED) to obtain excess absolute risk (EAR), life-time attributable risk (LAR) and other risk relevant parameters. A α' value of 0.018 Gy-1 and a repopulation factor R of 0.93 was used in the mechanistic model for carcinoma induction. Gender specific correction factor of 0.17 and - 0.17 for females and males were used for the EAR calculation. The relative integral dose of all critical structures averaged were 6.3, 4.8, 4.5 and 4.7 times higher in 3DCRT, IMRT, VMAT and tomotherapy respectively compared to proton therapy. The mean relative LAR calculated from the mean EAR of all organs with linear DRM were 4.0, 2.9, 2.9, 2.7 higher for male and 4.0, 2.9, 2.8 and 2.7 times higher for female patients compared to proton therapy. The same values with the mechanistic model were 2.2, 3.6, 3.2, 3.8 and 2.2, 3.5, 3.2, 3.8 times higher compared to proton therapy for male and female patients respectively. All critical structures except lungs and kidneys considered in this study had a substantially lower OED in proton plans. Risk of radiation-induced second malignancy in Proton PBS compared to conventional photon treatments were up to three and four times lesser for male and female patients respectively with the linear DRM. Using the mechanistic DRM these were up to two and three times lesser in proton plans for male and female patients respectively.

颅脊髓放射治疗被广泛用于治疗儿童髓母细胞瘤。辐射引起的二次恶性肿瘤是一个严重的问题;特别是儿童,因为他们的预期寿命长,年轻时组织的放射敏感性较高。CSI可采用3DCRT、IMRT、VMAT和断层治疗等技术。然而,由于光子照射的物理特性,这些技术与较高的二次恶性肿瘤风险相关,光子照射对正常组织的剂量较高。另一方面,与光子治疗相比,质子束治疗对正常组织的剂量要小得多,因为在布拉格峰之后剂量会急剧下降。这项工作的目的是量化与其他光子治疗相比,质子治疗在CSI风险的相对降低。本研究选择了先前治疗过的10个匿名患者DICOM数据集。生成3DCRT、IMRT、VMAT、断层治疗和质子治疗铅笔束扫描(PBS)方案。处方剂量为36 Gy,分20份。之所以选择PBS,是因为与被动散射相比,它的中子剂量要小得多。患者年龄3 ~ 12岁,中位年龄8岁,男6例,女4例。常用的线性和机械剂量响应模型(DRM)被用于分析。计算临界结构的剂量-体积直方图(DVH),计算器官等效剂量(OED),从而获得超额绝对风险(EAR)、终生归因风险(LAR)和其他风险相关参数。A α′值为0.018 Gy-1,再种群因子R为0.93。女性和男性的性别校正因子分别为0.17和- 0.17。与质子治疗相比,3DCRT、IMRT、VMAT和断层治疗各关键结构的平均相对积分剂量分别高6.3倍、4.8倍、4.5倍和4.7倍。由线性DRM的所有器官平均EAR计算的平均相对LAR,男性比质子治疗高4.0倍、2.9倍、2.9倍、2.7倍,女性比质子治疗高4.0倍、2.9倍、2.8倍、2.7倍。与机制模型相同的数值分别是2.2、3.6、3.2、3.8和2.2、3.5、3.2、3.8倍于质子治疗。本研究中除肺和肾外的所有关键结构在质子计划中都有明显较低的OED。对于线性DRM的男性和女性患者,质子PBS放射诱导的第二次恶性肿瘤的风险分别比传统光子治疗低3倍和4倍。使用机械DRM,男性和女性患者的质子计划分别减少了两倍和三倍。
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引用次数: 18
EPSM 2018, Engineering and Physical Sciences in Medicine : 29-31 October 2018, Adelaide Convention Centre, Adelaide, Australia. EPSM 2018,医学工程和物理科学:2018年10月29-31日,阿德莱德会议中心,阿德莱德,澳大利亚。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-03-01 DOI: 10.1007/s13246-019-00724-x
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引用次数: 5
Correction to: Computational study on hemodynamic changes in patient-specific proximal neck angulation of abdominal aortic aneurysm with time-varying velocity. 修正:时变速度下腹主动脉瘤患者特异性颈近端成角血流动力学变化的计算研究。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-03-01 DOI: 10.1007/s13246-019-00741-w
Yousif A Algabri, Sorracha Rookkapan, Vera Gramigna, Daniel M Espino, Surapong Chatpun

The name of the third author was incorrect in the initial online publication. The original article has been corrected.

在最初的在线出版物中,第三位作者的名字不正确。原文已被更正。
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引用次数: 0
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Australasian Physical & Engineering Sciences in Medicine
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