Pub Date : 2024-07-29DOI: 10.1007/s40995-024-01679-9
Sumeyra UCAR, Murat AYDIN
Wheat (Triticum aestivum L.) is a global staple cereal known for its nutritional value and economic significance. Somatic embryogenesis (SE) is a powerful biotechnological tool for plant genetic improvement, driven by intricate epigenetic mechanisms as well as controlled by key genes such as Wuschel-related HOMEOBOX (WOX4), Leafy cotyledon (LEC1), Baby Boom 1 (BBM1), and Somatic embryogenesis receptor kinase (TaSERK). This study investigates the impact of different concentrations (0.1, 0.5, 1, and 2 µM) of Trichostatin A (TSA) and 5-Azacytidine (5-Azac), recognized epigenetic inhibitors, on mature embryos of Kırık bread wheat variety cultured in a callus formation medium. In vitro parameters including Callus formation frequency (CFF) (mg), callus fresh weight (CFW) (%), embryogenic callus formation frequency (ECFF) (%), embryogenic callus frequency (RECF) (%), and regeneration efficiency (RE) (number) as well as expression levels of WOX4, LEC1, BBM1, and TaSERK genes, were evaluated at 14, 28, and 42 days after initiation of tissue culture (DAI). The results show that TSA and 5-Azac treatments had a considerable influence on the in vitro parameters tested. Furthermore, these compounds had a significant effect on the mRNA expression levels of the WOX4, LEC1, BBM1, and TaSERK genes, which are important in SE. Specifically, LEC1 expression peaked at 42 DAI across all treatments, while WOX4 and BBM1 peaked at 14 DAI. TaSERK expression decreased by 42 DAI, with variations depending on treatment at previous time points. As a result of this study, 0.5 µM TSA and 5 µM 5-Azac treatments resulted in optimal plant regeneration, emphasizing the importance of epigenetic regulators in promoting somatic embryogenesis via endosperm-supported mature embryo in wheat. This study suggests addressing epigenetic systems to improve SE protocols and inform wheat genetic engineering and breeding initiatives for sustainable agriculture and food security.
{"title":"Effects of Epigenetic Inhibitors on Somatic Embryogenesis in Wheat (Triticum aestivum L.)","authors":"Sumeyra UCAR, Murat AYDIN","doi":"10.1007/s40995-024-01679-9","DOIUrl":"https://doi.org/10.1007/s40995-024-01679-9","url":null,"abstract":"<p>Wheat (<i>Triticum aestivum L</i>.) is a global staple cereal known for its nutritional value and economic significance. Somatic embryogenesis (SE) is a powerful biotechnological tool for plant genetic improvement, driven by intricate epigenetic mechanisms as well as controlled by key genes such as <i>Wuschel-related HOMEOBOX</i> (<i>WOX4</i>), <i>Leafy cotyledon</i> (<i>LEC1</i>), <i>Baby Boom 1</i> (<i>BBM1</i>), and <i>Somatic embryogenesis receptor kinase</i> (<i>TaSERK</i>). This study investigates the impact of different concentrations (0.1, 0.5, 1, and 2 µM) of Trichostatin A (TSA) and 5-Azacytidine (5-Azac), recognized epigenetic inhibitors, on mature embryos of Kırık bread wheat variety cultured in a callus formation medium. In vitro parameters including Callus formation frequency (CFF) (mg), callus fresh weight (CFW) (%), embryogenic callus formation frequency (ECFF) (%), embryogenic callus frequency (RECF) (%), and regeneration efficiency (RE) (number) as well as expression levels of <i>WOX4</i>, <i>LEC1</i>, <i>BBM1</i>, and <i>TaSERK</i> genes, were evaluated at 14, 28, and 42 days after initiation of tissue culture (DAI). The results show that TSA and 5-Azac treatments had a considerable influence on the in vitro parameters tested. Furthermore, these compounds had a significant effect on the mRNA expression levels of the WOX4, LEC1, BBM1, and TaSERK genes, which are important in SE. Specifically, LEC1 expression peaked at 42 DAI across all treatments, while WOX4 and BBM1 peaked at 14 DAI. TaSERK expression decreased by 42 DAI, with variations depending on treatment at previous time points. As a result of this study, 0.5 µM TSA and 5 µM 5-Azac treatments resulted in optimal plant regeneration, emphasizing the importance of epigenetic regulators in promoting somatic embryogenesis via endosperm-supported mature embryo in wheat. This study suggests addressing epigenetic systems to improve SE protocols and inform wheat genetic engineering and breeding initiatives for sustainable agriculture and food security.</p>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"75 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141870607","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-29DOI: 10.1007/s40995-024-01686-w
Amaya Pavithran, M. K. Preethi Rajan, R. K. Biju
Spontaneous quaternary fission accompanied by two α particles for isotopes 304120 in both equatorial and collinear configurations, and for 298,302120 in the equatorial configuration has been studied using Coulomb and proximity potential model with the inclusion of deformation and orientation of fragments. The most favourable quaternary fission channel is determined using cold reaction valley and relative yield plots. In the case of 304120, the equatorial emission of light charge particles displays distinct peaks, reaching a peak relative yield of approximately 33.65%. In contrast, collinear emission shows continuous peaks with a maximum relative yield around 1.27%. The peak relative is attributed to the presence of nuclei 121In for equatorial emission, and 122I, 192Au, 97Ru and 42Cl for collinear emission. For the parent isotopes 302120 a peak relative yield around 19.44% is obtained for combination containing nuclei 122Ag, whereas in the case of 298120, fission channels result in a maximum relative yield of approximately 22.08% with one fragment as 122Ag. The mentioned nuclei are found to possess either a magic number of protons or neutrons leading to shell closure. In addition to closed shell effect, the inclusion of deformation factors β2, β4 and orientation of fragments have a prominent role in determining the relative yield of a particular fission channel.
{"title":"Quaternary Fission of Various Z = 120 Isotopes Accompanied by Two α Particles as Light Charge Particles","authors":"Amaya Pavithran, M. K. Preethi Rajan, R. K. Biju","doi":"10.1007/s40995-024-01686-w","DOIUrl":"10.1007/s40995-024-01686-w","url":null,"abstract":"<div><p>Spontaneous quaternary fission accompanied by two α particles for isotopes <sup>304</sup>120 in both equatorial and collinear configurations, and for <sup>298,302</sup>120 in the equatorial configuration has been studied using Coulomb and proximity potential model with the inclusion of deformation and orientation of fragments. The most favourable quaternary fission channel is determined using cold reaction valley and relative yield plots. In the case of <sup>304</sup>120, the equatorial emission of light charge particles displays distinct peaks, reaching a peak relative yield of approximately 33.65%. In contrast, collinear emission shows continuous peaks with a maximum relative yield around 1.27%. The peak relative is attributed to the presence of nuclei <sup>121</sup>In for equatorial emission, and <sup>122</sup>I, <sup>192</sup>Au, <sup>97</sup>Ru and <sup>42</sup>Cl for collinear emission. For the parent isotopes <sup>302</sup>120 a peak relative yield around 19.44% is obtained for combination containing nuclei <sup>122</sup>Ag, whereas in the case of <sup>298</sup>120, fission channels result in a maximum relative yield of approximately 22.08% with one fragment as <sup>122</sup>Ag. The mentioned nuclei are found to possess either a magic number of protons or neutrons leading to shell closure. In addition to closed shell effect, the inclusion of deformation factors β<sub>2,</sub> β<sub>4</sub> and orientation of fragments have a prominent role in determining the relative yield of a particular fission channel.</p></div>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"48 5","pages":"1373 - 1381"},"PeriodicalIF":1.4,"publicationDate":"2024-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141870608","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-29DOI: 10.1007/s40995-024-01667-z
Mahima Tomar, Naokant Deo
In this study, we present a technique for enhancing the order of approximation of the modified form of the Bernstein operators that Usta F. achieved. Moreover, two novel operators with degrees of approximation one and two are obtained. Furthermore, we validate a few theoretical findings such as the Korovkin theorem, Voronovskaja theorem, modulus of continuity, etc. about the rate of convergence of these operators. In the end, we operate graphs and tables to illustrate the comparison between the constructed operators and compute the numerical verification of the theoretical conclusions.
在本研究中,我们提出了一种提高 Usta F. 实现的伯恩斯坦算子修正形式的近似阶数的技术。此外,我们还获得了两个近似度分别为 1 和 2 的新型算子。此外,我们还验证了关于这些算子收敛速度的一些理论发现,如科罗夫金定理、沃罗诺夫斯卡娅定理、连续性模量等。最后,我们用图表说明了所构建算子之间的比较,并计算了理论结论的数值验证。
{"title":"Theoretical Validation and Comparative Analysis of Higher Order Modified Bernstein Operators","authors":"Mahima Tomar, Naokant Deo","doi":"10.1007/s40995-024-01667-z","DOIUrl":"10.1007/s40995-024-01667-z","url":null,"abstract":"<div><p>In this study, we present a technique for enhancing the order of approximation of the modified form of the Bernstein operators that Usta F. achieved. Moreover, two novel operators with degrees of approximation one and two are obtained. Furthermore, we validate a few theoretical findings such as the Korovkin theorem, Voronovskaja theorem, modulus of continuity, etc. about the rate of convergence of these operators. In the end, we operate graphs and tables to illustrate the comparison between the constructed operators and compute the numerical verification of the theoretical conclusions.</p></div>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"48 5","pages":"1313 - 1327"},"PeriodicalIF":1.4,"publicationDate":"2024-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141873370","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-27DOI: 10.1007/s40995-024-01689-7
A. M. Jarrah, Nikhil Khanna, A. Zothansanga, Dilip Kumar
Pathak (2011) introduced variation diminishing wavelets and wavelets of specified changes in sign by utilising Schoenberg’s notion of variation-diminishing integral operators of convolution type. In this paper, we introduce some generalized variation diminishing wavelets based on the Hartley kernel and the Boas transforms. In particular, we introduce wavelets with specific changes of sign and wavelets based on Tanno’s form of convolution kernels.
{"title":"A Short Note on Generalized Variation Diminishing Wavelets","authors":"A. M. Jarrah, Nikhil Khanna, A. Zothansanga, Dilip Kumar","doi":"10.1007/s40995-024-01689-7","DOIUrl":"10.1007/s40995-024-01689-7","url":null,"abstract":"<div><p>Pathak (2011) introduced variation diminishing wavelets and wavelets of specified changes in sign by utilising Schoenberg’s notion of variation-diminishing integral operators of convolution type. In this paper, we introduce some generalized variation diminishing wavelets based on the Hartley kernel and the Boas transforms. In particular, we introduce wavelets with specific changes of sign and wavelets based on Tanno’s form of convolution kernels.</p></div>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"48 5","pages":"1299 - 1305"},"PeriodicalIF":1.4,"publicationDate":"2024-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141778764","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-27DOI: 10.1007/s40995-024-01680-2
V. Gokul, M. S. Swapna, S. Sankararaman
The paper delineates the synthesis and development of zinc oxide (ZnO) hybrid nanofluids (HNFs) with different carbon sources (diesel soot (DS) and acetylene black (AB)) to address heat transfer (HT) limitations in thermal systems. Using a highly sensitive mode-mismatched dual beam thermal lens (MDTL) technique, the concentration-dependent thermal diffusivity modifications of the synthesized HNFs are monitored. The method of solution combustion is utilized for the synthesis of ZnO powder. The ZnO-hybrid composites are prepared by solid-state mixing and annealing of ZnO with DS and AB. The structure characteristics of the synthesized hybrid composites are understood through X-ray diffraction (XRD) analysis, Fourier transform infrared spectroscopy, X-ray photoelectron spectroscopy, and Raman spectroscopy. The XRD and Raman analyses revealed the structural dislocations and the degree of disorder within the synthesized composites. The optical properties of the samples are revealed through ultraviolet-visible analysis. The MDTL investigation is carried out by preparing HNFs of the samples in ethylene glycol as the base fluid, thus elucidating the effect of lattice dislocations on the thermal behavior of the synthesized HNFs. Thus, the study suggests the potential of lattice dislocations-induced thermal diffusivity tuning ZnO-DS and ZnO-AB hybrid composites for various HT applications.
本文阐述了氧化锌(ZnO)与不同碳源(柴油烟尘(DS)和乙炔黑(AB))混合纳米流体(HNFs)的合成与开发,以解决热系统中的传热(HT)限制。利用高灵敏度的模式错配双光束热透镜(MDTL)技术,监测了合成 HNFs 随浓度变化的热扩散率变化。氧化锌粉末的合成采用了溶液燃烧法。通过将氧化锌与 DS 和 AB 固态混合并退火,制备出氧化锌杂化复合材料。通过 X 射线衍射(XRD)分析、傅立叶变换红外光谱、X 射线光电子能谱和拉曼光谱了解合成杂化复合材料的结构特征。X 射线衍射和拉曼分析揭示了合成复合材料的结构位错和无序程度。紫外可见光分析揭示了样品的光学特性。通过在乙二醇基液中制备样品的 HNF,进行了 MDTL 研究,从而阐明了晶格位错对合成 HNF 热行为的影响。因此,该研究表明,晶格位错诱导的热扩散调谐 ZnO-DS 和 ZnO-AB 混合复合材料具有应用于各种高温应用的潜力。
{"title":"Dislocation Induced Thermal Diffusivity Tuning of ZnO Hybrid Nanofluids: A Mode Mismatched Dual Beam Thermal Lens Study","authors":"V. Gokul, M. S. Swapna, S. Sankararaman","doi":"10.1007/s40995-024-01680-2","DOIUrl":"https://doi.org/10.1007/s40995-024-01680-2","url":null,"abstract":"<p>The paper delineates the synthesis and development of zinc oxide (ZnO) hybrid nanofluids (HNFs) with different carbon sources (diesel soot (DS) and acetylene black (AB)) to address heat transfer (HT) limitations in thermal systems. Using a highly sensitive mode-mismatched dual beam thermal lens (MDTL) technique, the concentration-dependent thermal diffusivity modifications of the synthesized HNFs are monitored. The method of solution combustion is utilized for the synthesis of ZnO powder. The ZnO-hybrid composites are prepared by solid-state mixing and annealing of ZnO with DS and AB. The structure characteristics of the synthesized hybrid composites are understood through X-ray diffraction (XRD) analysis, Fourier transform infrared spectroscopy, X-ray photoelectron spectroscopy, and Raman spectroscopy. The XRD and Raman analyses revealed the structural dislocations and the degree of disorder within the synthesized composites. The optical properties of the samples are revealed through ultraviolet-visible analysis. The MDTL investigation is carried out by preparing HNFs of the samples in ethylene glycol as the base fluid, thus elucidating the effect of lattice dislocations on the thermal behavior of the synthesized HNFs. Thus, the study suggests the potential of lattice dislocations-induced thermal diffusivity tuning ZnO-DS and ZnO-AB hybrid composites for various HT applications.</p>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"62 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141778848","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-27DOI: 10.1007/s40995-024-01681-1
Sana Ben Mustapha, Donia Abdallah, Sahar Haffar, Amel Salhi Hannachi, Ghada Baraket
The genus Prunus is among the main species cultivated in Tunisia, due to its economic importance. In this study, genetic diversity and relationships among Tunisian Prunus species was explored using six specific SSR chloroplastic primers (cpSSR) of Rosaceae. The parameters of polymorphism were estimated and showed 5.831 alleles per locus, among them, 1.315 were effective alleles, giving a Shannon’s information index of 0.323. Twelve haplotypes were shared by more than one accession, while 55 haplotypes were accession-specific, confirming the effectiveness of cpSSR as good markers for molecular characterization and identification of Prunus species. Furthermore, the important haplotype diversity proved the allelic singularity of the Tunisian genotypes, considered as a valuable gene pool repository for future breeding programs. Moreover, the results obtained highlighted the ancient origin of the Tunisian Prunus genotypes. The UPGMA dendrogram, the model based Bayesian clustering, PCA analysis and Nm values are clearly consistent with a genetic structuring and showed a high level of differentiation within the genus. Although, the classification of Prunus genus has been controversial issue, our results showed that chloroplastic genome may supply information regarding the evolutionary history of members of Prunus genus. To conclude, this work joins to other studies to demonstrate the effective power of single- parent organelle markers for molecular characterization and population genetic studies.
{"title":"Prunus Species Diversity, Structure and Phylogenetic Studies Assessed by Chloroplastic Microsatellite Markers","authors":"Sana Ben Mustapha, Donia Abdallah, Sahar Haffar, Amel Salhi Hannachi, Ghada Baraket","doi":"10.1007/s40995-024-01681-1","DOIUrl":"10.1007/s40995-024-01681-1","url":null,"abstract":"<div><p>The genus <i>Prunus</i> is among the main species cultivated in Tunisia, due to its economic importance. In this study, genetic diversity and relationships among Tunisian <i>Prunus</i> species was explored using six specific SSR chloroplastic primers (cpSSR) of Rosaceae. The parameters of polymorphism were estimated and showed 5.831 alleles per locus, among them, 1.315 were effective alleles, giving a Shannon’s information index of 0.323. Twelve haplotypes were shared by more than one accession, while 55 haplotypes were accession-specific, confirming the effectiveness of cpSSR as good markers for molecular characterization and identification of <i>Prunus</i> species. Furthermore, the important haplotype diversity proved the allelic singularity of the Tunisian genotypes, considered as a valuable gene pool repository for future breeding programs. Moreover, the results obtained highlighted the ancient origin of the Tunisian <i>Prunus</i> genotypes. The UPGMA dendrogram, the model based Bayesian clustering, PCA analysis and Nm values are clearly consistent with a genetic structuring and showed a high level of differentiation within the genus. Although, the classification of <i>Prunus</i> genus has been controversial issue, our results showed that chloroplastic genome may supply information regarding the evolutionary history of members of <i>Prunus</i> genus. To conclude, this work joins to other studies to demonstrate the effective power of single- parent organelle markers for molecular characterization and population genetic studies.</p></div>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"48 5","pages":"1175 - 1186"},"PeriodicalIF":1.4,"publicationDate":"2024-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141785456","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Acantholimon brevispicum Bibak, Kaz.Osaloo & Assadi (Plumbaginaceae) is described and illustrated as a new species from the Palvar Mountains, Kerman province, SE Iran. In this paper, we discuss morphological characteristics and molecular data that differentiate the species from closely related taxa. According to morphological characters, the new species belongs to the A. sect. Acantholimon (= Staticopsis) and closely related to A. hormozganense and A. zaeifii, but is easily recognized by its leaves, flowering stem length, inflorescence, bracteole shape, and petal. Morphological comparisons and taxonomic relationships of A. brevispicum with closely related taxa are discussed. Phylogenetic analysis was performed using maximum likelihood and Bayesian inference methods based on nrDNA ITS and plastid rpl32-trnL(UAG) markers. According to molecular and morphological evidence, the new species is distinct from its close relatives. The molecular phylogeny analyses support the placement of A. brevispicum based on morphology. The information provided includes a species description, plant images, a diagnostic key, a distribution map, and a molecular phylogenetic tree.
Acantholimon brevispicum Bibak, Kaz.Osaloo & Assadi(Plumbaginaceae)是来自伊朗东南部克尔曼省 Palvar 山的一个新物种,本文对其进行了描述和图解。本文讨论了该物种与近缘类群的形态特征和分子数据差异。根据形态特征,该新种属于 A. sect.Acantholimon(= Staticopsis),与 A. hormozganense 和 A. zaeifii 亲缘关系密切,但其叶片、花茎长度、花序、小苞片形状和花瓣很容易识别。本文讨论了 A. brevispicum 与近缘类群的形态学比较和分类学关系。利用基于 nrDNA ITS 和质粒 rpl32-trnL(UAG) 标记的最大似然法和贝叶斯推断法进行了系统发生分析。根据分子和形态学证据,该新物种有别于其近亲。分子系统进化分析支持基于形态学的 A. brevispicum 的定位。所提供的信息包括物种描述、植物图片、诊断钥匙、分布图和分子系统树。
{"title":"Acantholimon brevispicum (Plumbaginaceae) a New Species from Southeastern Iran Based on Morphological and Molecular Data","authors":"Hossein Bibak, Shahrokh Kazempour-Osaloo, Mostafa Assadi","doi":"10.1007/s40995-024-01688-8","DOIUrl":"https://doi.org/10.1007/s40995-024-01688-8","url":null,"abstract":"<p><i>Acantholimon brevispicum</i> Bibak, Kaz.Osaloo & Assadi (Plumbaginaceae) is described and illustrated as a new species from the Palvar Mountains, Kerman province, SE Iran. In this paper, we discuss morphological characteristics and molecular data that differentiate the species from closely related taxa. According to morphological characters, the new species belongs to the <i>A</i>. sect. <i>Acantholimon</i> (= <i>Staticopsis</i>) and closely related to <i>A. hormozganense</i> and <i>A. zaeifii</i>, but is easily recognized by its leaves, flowering stem length, inflorescence, bracteole shape, and petal. Morphological comparisons and taxonomic relationships of <i>A. brevispicum</i> with closely related taxa are discussed. Phylogenetic analysis was performed using maximum likelihood and Bayesian inference methods based on nrDNA ITS and plastid <i>rpl</i>32-<i>trn</i>L<sub>(UAG)</sub> markers. According to molecular and morphological evidence, the new species is distinct from its close relatives. The molecular phylogeny analyses support the placement of <i>A. brevispicum</i> based on morphology. The information provided includes a species description, plant images, a diagnostic key, a distribution map, and a molecular phylogenetic tree.</p>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"62 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141778851","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In this study, we investigate the nonlinear potential Korteweg–de Vries equation (pKdVe) by making use of the Lie group analysis. We start by constructing Lie symmetries and thereafter utilize them to execute symmetry reductions of pKdVe. We then obtain solutions of the pKdVe by using the direct integration method. The obtained solutions are demonstrated in respect of Jacobi elliptic functions. Some of the obtained solutions are illustrated graphically. Moreover, we obtain four conserved vectors of the pKdVe by making use of the multiplier method and five conserved vectors by using the theorem owing to Ibragimov. Finally, we simulate collisions between kinks for the pKdVe.
{"title":"Numerical Simulation of Kink Collisions, Analytical Solutions and Conservation Laws of the Potential Korteweg–de Vries Equation","authors":"Chaudry Masood Khalique, Carel Olivier, Boikanyo Pretty Sebogodi","doi":"10.1007/s40995-024-01670-4","DOIUrl":"https://doi.org/10.1007/s40995-024-01670-4","url":null,"abstract":"<p>In this study, we investigate the nonlinear potential Korteweg–de Vries equation (pKdVe) by making use of the Lie group analysis. We start by constructing Lie symmetries and thereafter utilize them to execute symmetry reductions of pKdVe. We then obtain solutions of the pKdVe by using the direct integration method. The obtained solutions are demonstrated in respect of Jacobi elliptic functions. Some of the obtained solutions are illustrated graphically. Moreover, we obtain four conserved vectors of the pKdVe by making use of the multiplier method and five conserved vectors by using the theorem owing to Ibragimov. Finally, we simulate collisions between kinks for the pKdVe.</p>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"69 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141778763","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-25DOI: 10.1007/s40995-024-01674-0
Sergey V. Belim, Ilya V. Tikhomirov
The article focuses on computer simulations of moire patterns in graphene film on a copper substrate. The surface potential simulates the influence of the substrate on the graphene film. The substrate potential is calculated from the Lennard-Jones paired potential. The interaction between carbon atoms is also determined by the Lennard-Jones potential. It is shown that for two-dimensional structures the parameters of the pair potential differ from the three-dimensional analogue. The simulation results in moire structures in the graphene film. We perform calculations for different orientation angles of graphene relative to the crystal lattice Cu(111). The moire superlattice period decreases with increasing angle between the bond directions of the graphene atoms and the main crystal lattice directions of the substrate. The results of the calculations are in good agreement with the experimental data.
{"title":"Moire Structures in Graphene on Cu (111) Substrate: Computer Simulation","authors":"Sergey V. Belim, Ilya V. Tikhomirov","doi":"10.1007/s40995-024-01674-0","DOIUrl":"10.1007/s40995-024-01674-0","url":null,"abstract":"<div><p>The article focuses on computer simulations of moire patterns in graphene film on a copper substrate. The surface potential simulates the influence of the substrate on the graphene film. The substrate potential is calculated from the Lennard-Jones paired potential. The interaction between carbon atoms is also determined by the Lennard-Jones potential. It is shown that for two-dimensional structures the parameters of the pair potential differ from the three-dimensional analogue. The simulation results in moire structures in the graphene film. We perform calculations for different orientation angles of graphene relative to the crystal lattice Cu(111). The moire superlattice period decreases with increasing angle between the bond directions of the graphene atoms and the main crystal lattice directions of the substrate. The results of the calculations are in good agreement with the experimental data.</p></div>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"48 5","pages":"1365 - 1372"},"PeriodicalIF":1.4,"publicationDate":"2024-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141870609","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Colorectal cancer (CRC) ranks third in malignant tumor mortality worldwide. Oxaliplatin, a third-generation chemotherapeutic drug, treats several malignancies, including colorectal cancer, after cisplatin and carboplatin. However, reducing side effects and optimizing efficacy is challenging. The utilization of plant-assisted green synthesis for the production of nanoparticles is a cost-effective and environmentally sustainable approach. This method could be at the forefront of chemotherapy due to its simplicity and efficiency. The ginger extract has been well-introduced with anti-cancer and antioxidant properties. The present study involved the green synthesis and characterization of oxaliplatin nanoparticles (OxPt NPs) through dynamic light scattering (DLS), Fourier transform infrared spectroscopy (FTIR), inductively coupled plasma spectroscopy (ICP), field emission scanning electron microscopy (FESEM), and atomic force microscopy (AFM). This study investigated the effectiveness of OxPt NPs, ginger extract, and conventional oxaliplatin (first-line drug of CRC) on the HCT116 colorectal cancer cell line through MTT assay comparatively. The findings exhibited an outstanding efficiency of 72% in the synthesis process of OxPt nanoparticles and their subsequent encapsulation utilizing ginger extract. The nanoparticles demonstrated a size distribution within the 50–110 nm range and exhibited remarkable stability in colloidal form. The MTT assay results indicate that the OxPt NPs showed a favorable cytotoxic effect on colorectal cancer cells, as evidenced by an IC50 value of 7.08 µM. Furthermore, flow cytometry data show that the nanoparticles primarily induced apoptosis as the mechanism of cell death rather than necrosis. The findings indicate that the synthesized OxPt NPs can be a new and efficient medication for addressing CRC. Overall, the present investigation showcases the efficacious amalgamation and delineation of OxPt nanoparticles, exhibiting their potential cytotoxic impacts on colorectal cancer cells.
{"title":"Design, Synthesis, and Toxicity Evaluation of the Green Synthesized Oxaliplatin Nanoparticles Using Ginger Extract against Colorectal Cancer Cells","authors":"Ilnaz Tork Cherik, Adeleh Divsalar, Seyed Abdolhamid Angaji","doi":"10.1007/s40995-024-01678-w","DOIUrl":"10.1007/s40995-024-01678-w","url":null,"abstract":"<div><p>Colorectal cancer (CRC) ranks third in malignant tumor mortality worldwide. Oxaliplatin, a third-generation chemotherapeutic drug, treats several malignancies, including colorectal cancer, after cisplatin and carboplatin. However, reducing side effects and optimizing efficacy is challenging. The utilization of plant-assisted green synthesis for the production of nanoparticles is a cost-effective and environmentally sustainable approach. This method could be at the forefront of chemotherapy due to its simplicity and efficiency. The ginger extract has been well-introduced with anti-cancer and antioxidant properties. The present study involved the green synthesis and characterization of oxaliplatin nanoparticles (OxPt NPs) through dynamic light scattering (DLS), Fourier transform infrared spectroscopy (FTIR), inductively coupled plasma spectroscopy (ICP), field emission scanning electron microscopy (FESEM), and atomic force microscopy (AFM). This study investigated the effectiveness of OxPt NPs, ginger extract, and conventional oxaliplatin (first-line drug of CRC) on the HCT116 colorectal cancer cell line through MTT assay comparatively. The findings exhibited an outstanding efficiency of 72% in the synthesis process of OxPt nanoparticles and their subsequent encapsulation utilizing ginger extract. The nanoparticles demonstrated a size distribution within the 50–110 nm range and exhibited remarkable stability in colloidal form. The MTT assay results indicate that the OxPt NPs showed a favorable cytotoxic effect on colorectal cancer cells, as evidenced by an IC<sub>50</sub> value of 7.08 µM. Furthermore, flow cytometry data show that the nanoparticles primarily induced apoptosis as the mechanism of cell death rather than necrosis. The findings indicate that the synthesized OxPt NPs can be a new and efficient medication for addressing CRC. Overall, the present investigation showcases the efficacious amalgamation and delineation of OxPt nanoparticles, exhibiting their potential cytotoxic impacts on colorectal cancer cells.</p></div>","PeriodicalId":600,"journal":{"name":"Iranian Journal of Science and Technology, Transactions A: Science","volume":"48 6","pages":"1411 - 1423"},"PeriodicalIF":1.4,"publicationDate":"2024-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141778846","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}