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Anti-toxoplasma activity and DNA-binding of copper(II) and zinc(II) coordination compounds with 5-nitroimidazole-based ligands 含 5-硝基咪唑配体的铜(II)和锌(II)配位化合物的抗支原体活性和 DNA 结合力
IF 2.7 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1007/s00775-023-02029-7
Rubí Navarro-Peñaloza, Jhony Anacleto-Santos, Norma Rivera-Fernández, Francisco Sánchez-Bartez, Isabel Gracia-Mora, Ana B. Caballero, Patrick Gamez, Norah Barba-Behrens

Tetrahedral copper(II) and zinc(II) coordination compounds from 5-nitroimidazole derivatives, viz. 1-(2-chloroethyl)-2-methyl-5-nitroimidazole (cenz) and ornidazole 1-(3-chloro-2-hydroxypropyl)-2-methyl-5-nitroimidazole (onz), were synthesized and spectroscopically characterized. Their molecular structures were determined by X-ray diffraction studies. The complexes [Cu(onz)2X2], [Zn(onz)2X2], [Cu(cenz)2X2] and [Zn(cenz)2X2] (X = Cl, Br), are stable in solution and exhibit positive LogD7.4 values that are in the range for molecules capable of crossing the cell membrane via passive difussion. Their biological activity against Toxoplasma gondi was investigated, and IC50 and lethal dose (LD50) values were determined. The ornidazole copper(II) compounds showed very good antiparasitic activity in its tachyzoite morphology. The interaction of the coordination compounds with DNA was examined by circular dichroism, fluorescence (using intercalating ethidium bromide and minor groove binding Hoechst 33258) and UV–Vis spectroscopy. The copper(II) compounds interact with the minor groove of the biomolecule, whereas weaker electrostatic interactions take place with the zinc(II) compounds. The spectroscopic data achieved for the two series of complexes (namely with copper(II) and zinc(II) as metal center) agree with the respective DNA-damage features observed by gel electrophoresis.

Graphical abstract

从 5-硝基咪唑衍生物(即 1-(2-氯乙基)-2-甲基-5-硝基咪唑(cenz)和 1-(3-氯-2-羟基丙基)-2-甲基-5-硝基咪唑(onz))合成了四面体铜(II)和锌(II)配位化合物,并对其进行了光谱表征。通过 X 射线衍射研究确定了它们的分子结构。[Cu(onz)2X2]、[Zn(onz)2X2]、[Cu(cenz)2X2]和[Zn(cenz)2X2](X- = Cl、Br)复合物在溶液中稳定,并显示出正 LogD7.4 值,处于能够通过被动扩散作用穿过细胞膜的分子的范围内。研究人员考察了它们对弓形虫的生物活性,并测定了 IC50 和致死剂量 (LD50) 值。奥硝唑铜(II)化合物在弓形虫形态上显示出非常好的抗寄生虫活性。配位化合物与 DNA 的相互作用是通过圆二色性、荧光(使用插入型溴化乙锭和小沟结合型 Hoechst 33258)和紫外可见光谱进行检测的。铜(II)化合物与生物大分子的次凹槽相互作用,而锌(II)化合物的静电作用较弱。两个系列复合物(即以铜(II)和锌(II)为金属中心的复合物)的光谱数据与凝胶电泳观察到的 DNA 损伤特征一致。
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引用次数: 0
Characterization, modes of interactions with DNA/BSA biomolecules and anti-tumor activity of newly synthesized dinuclear platinum(II) complexes with pyridazine bridging ligand 新合成的具有哒嗪桥接配体的双核铂(II)配合物的特性、与 DNA/BSA 生物大分子的相互作用模式及抗肿瘤活性
IF 2.7 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-15 DOI: 10.1007/s00775-023-02030-0
Sanja Zornić, Bojana Simović Marković, Andjela A. Franich, Goran V. Janjić, Milka B. Jadranin, Jelena Avdalović, Snežana Rajković, Marija D. Živković, Nebojša N. Arsenijević, Gordana D. Radosavljević, Jelena Pantić

Platinum-based drugs are widely recognized efficient anti-tumor agents, but faced with multiple undesirable effects. Here, four dinuclear platinum(II) complexes, [{Pt(1,2-pn)Cl}2(μ-pydz)]Cl2 (C1), [{Pt(ibn)Cl}2(μ-pydz)]Cl2 (C2), [{Pt(1,3-pn)Cl}2(μ-pydz)]Cl2 (C3) and [{Pt(1,3-pnd)Cl}2(μ-pydz)]Cl2 (C4), were designed (pydz is pyridazine, 1,2-pn is ( ±)-1,2-propylenediamine, ibn is 1,2-diamino-2-methylpropane, 1,3-pn is 1,3-propylenediamine, and 1,3-pnd is 1,3-pentanediamine). Interactions and binding ability of C1C4 complexes with calf thymus DNA (CT-DNA) has been monitored by viscosity measurements, UV–Vis, fluorescence emission spectroscopy and molecular docking. Binding affinities of C1C4 complexes to the bovine serum albumin (BSA) has been monitored by fluorescence emission spectroscopy. The tested complexes exhibit variable cytotoxicity toward different mouse and human tumor cell lines. C2 shows the most potent cytotoxicity, especially against mouse (4T1) and human (MDA-MD468) breast cancer cells in the dose- and time-dependent manner. C2 induces 4T1 and MDA-MD468 cells apoptosis, further documented by the accumulation of cells at sub-G1 phase of cell cycle and increase of executive caspase 3 and caspase 9 levels in 4T1 cells. C2 exhibits anti-proliferative effect through the reduction of cyclin D3 and cyclin E expression and elevation of inhibitor p27 level. Also, C2 downregulates c-Myc and phosphorylated AKT, oncogenes involved in the control of tumor cell proliferation and death. In order to measure the amount of platinum(II) complexes taken up by the cells, the cellular platinum content were quantified. However, C2 failed to inhibit mouse breast cancer growth in vivo. Chemical modifications of tested platinum(II) complexes might be a valuable approach for the improvement of their anti-tumor activity, especially effects in vivo.

Graphical abstract

Dinuclear platinum(II) complex [{Pt(ibn)Cl}2(μ-pydz)]Cl2 shows anti-tumor activity, triggers the apoptosis and reduces the proliferation of mouse breast cancer cells in vitro. However, its inhibitory effect on tumor growth in vivo is absent.

铂类药物是公认的高效抗肿瘤药物,但也面临着多种不良反应。在此,我们设计了四种双核铂(II)配合物:[{Pt(1,2-pn)Cl}2(μ-pydz)]Cl2(C1)、[{Pt(ibn)Cl}2(μ-pydz)]Cl2(C2)、[{Pt(1,3-pn)Cl}2(μ-pydz)]Cl2(C3)和[{Pt(1,3-pnd)Cl}2(μ-pydz)]Cl2(C4)、pydz 是哒嗪,1,2-pn 是 ( ±)-1,2-丙二胺,ibn 是 1,2-二氨基-2-甲基丙烷,1,3-pn 是 1,3-丙二胺,1,3-pnd 是 1,3-戊二胺)。C1-C4 复合物与小牛胸腺 DNA(CT-DNA)的相互作用和结合能力已通过粘度测量、紫外可见光谱、荧光发射光谱和分子对接进行了监测。通过荧光发射光谱监测了 C1-C4 复合物与牛血清白蛋白(BSA)的结合亲和力。测试的复合物对不同的小鼠和人类肿瘤细胞系具有不同的细胞毒性。C2 的细胞毒性最强,尤其是对小鼠(4T1)和人类(MDA-MD468)乳腺癌细胞的毒性,其毒性呈剂量和时间依赖性。C2 可诱导 4T1 和 MDA-MD468 细胞凋亡,细胞周期亚 G1 期的细胞积累以及 4T1 细胞中执行 Caspase 3 和 Caspase 9 水平的升高进一步证明了这一点。C2 通过降低细胞周期蛋白 D3 和细胞周期蛋白 E 的表达以及提高抑制剂 p27 的水平,表现出抗增殖作用。此外,C2 还能下调参与控制肿瘤细胞增殖和死亡的癌基因 c-Myc 和磷酸化 AKT。为了测量细胞吸收铂(II)复合物的数量,对细胞中的铂含量进行了量化。然而,C2 未能抑制小鼠乳腺癌在体内的生长。图解摘要核铂(II)复合物[{Pt(ibn)Cl}2(μ-pydz)]Cl2在体外具有抗肿瘤活性,可诱导小鼠乳腺癌细胞凋亡并减少其增殖。然而,它对体内肿瘤生长的抑制作用却不明显。
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引用次数: 0
6-Pyrazolylpurine and its deaza derivatives as nucleobases for silver(I)-mediated base pairing with pyrimidines 6-吡唑嘌呤及其二氮衍生物作为银(I)介导的嘧啶碱基配对的核碱基。
IF 3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-20 DOI: 10.1007/s00775-023-02022-0
Daniela Escher, Tim Schäfer, Marian Hebenbrock, Jens Müller
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引用次数: 0
Gadolinium(III) complex formation with a β-cyclodextrin ligand: an XAS study of a potential MRI contrast agent 钆(III)配合物与β-环糊精配体的形成:一种潜在MRI造影剂的XAS研究。
IF 3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-20 DOI: 10.1007/s00775-023-02027-9
Farideh Jalilehvand, Saba Homayonia, Ping Zhang, Chang-Chun Ling

In the search for improved and safer gadolinium-based magnetic resonance imaging (MRI) contrast agents, macrocyclic cyclodextrins (CDs) attract great interest. Our group previously synthesized a cyclodextrin-based ligand with 1,2,3-triazolmethyl residues conjugated to β-CD, called β-CD(A), which efficiently chelates Gd(III) ions. To probe the local structure around the Gd(III) ion in the 1:1 Gd(III): β-CD(A) complex in aqueous solution (pH 5.5), we used extended X-ray absorption fine structure (EXAFS) spectroscopy. Least-squares curve fitting of the Gd L3-edge EXAFS spectrum revealed 5 Gd–O (4 COO and 1 H2O) and 4 Gd–N (from two imino and two 1,2,3-triazole groups) bonds around the Gd(III) ion with average distances 2.36 and 2.56 ± 0.02 Å, respectively. A similar EXAFS spectrum was obtained from an aqueous solution of the clinically used MRI contrast agent Na[Gd(DOTA)(H2O)], also 9-coordinated in its first shell. Careful analysis revealed that the mean Gd–N distance is shorter in the Gd(III): β-CD(A) (1:1) complex, indicating stronger Gd–N bonding and stronger Gd(III) complex formation than with the DOTA4− ligand. This is consistent with the lower free Gd3+ concentration found previously for the Gd(III): β-CD(A) (1:1) complex than for the [Gd(DOTA)(H2O)] complex, and shows its potential as an MRI probe.

Graphical abstract

EXAFS spectroscopy revealed a similar Gd(III) 9-coordination although slightly stronger for a modified β-cyclodextrin: Gd(III) 1:1 complex, [Gd(LH4)]7−, in aqueous solution than for the clinically used MRI contrast agent Na[Gd(DOTA)(H2O)].

在寻找改进和安全的钆基磁共振成像(MRI)造影剂的过程中,大环环糊精(cd)引起了人们的极大兴趣。本课课组先前合成了一种以环糊精为基础的配体,其1,2,3-三唑甲基残基与β-CD偶联,称为β-CD(a),可有效地螯合Gd(III)离子。为了探测pH 5.5水溶液中1:1 Gd(III): β-CD(A)配合物中Gd(III)离子周围的局部结构,我们采用扩展x射线吸收精细结构(EXAFS)光谱法。Gd(III)离子的最小二乘曲线拟合显示Gd(III)离子周围有5个Gd- o(4个COO-和1个H2O)和4个Gd- n(来自两个亚硝基和两个1,2,3-三唑基)键,平均距离分别为2.36和2.56±0.02 Å。从临床使用的MRI造影剂Na[Gd(DOTA)(H2O)]的水溶液中获得了类似的EXAFS光谱,其第一壳层也是9配位的。仔细分析发现,Gd(III): β-CD(A)(1:1)配合物中Gd- n的平均距离较短,表明与DOTA4-配体相比,Gd- n成键更强,Gd(III)配合物形成更强。这与先前发现的Gd(III): β-CD(A)(1:1)复合物比[Gd(DOTA)(H2O)]-复合物的游离Gd3+浓度低一致,并显示其作为MRI探针的潜力。EXAFS光谱显示了类似的Gd(III) 9配位,尽管修饰的β-环糊精:Gd(III) 1:1配合物[Gd(LH4)]7-在水溶液中比临床使用的MRI造影剂Na[Gd(DOTA)(H2O)]稍强。
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引用次数: 0
Multistep synthesis of a novel copper complex with potential for Alzheimer’s disease diagnosis 一种具有阿尔茨海默病诊断潜力的新型铜配合物的多步合成。
IF 3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-17 DOI: 10.1007/s00775-023-02028-8
Fatma Dellal, Diego Santo Domingo Porqueras, Stacy Narayanin-Richenapin, Marine Thimotee, Vanessa Delahaye, Yacine Diouf, Karolina Piasta, Elżbieta Gumienna-Kontecka, Henryk Kozlowski, Maryline Beyler, Raphael Tripier, Alban Moyeux, Olivier Gager, Valérie Besnard, Milena Salerno

Positron emission tomography (PET) imaging of Aβ plaques, is recognized as a tool for the diagnosis of Alzheimer’s disease. As a contribution to the development of new strategies for early diagnosis of the disease, using PET medical imaging technique, a new copper complex, the [Cu(TE1PA-ONO)]+ was synthesized in ten steps. The key step of our strategy is the coupling of a monopicolinate-N-alkylated cyclam-based ligand with a moiety capable of recognizing Aβ plaques via a successful and challenging Buchwald-Hartwig coupling reaction. To our knowledge, it is the first time that such a strategy is used to functionalize polyazamacrocyclic derivatives. The thermodynamic stability constants determined in MeOH/H2O solvent indicate that the attachment of this moiety does not weaken the chelating properties of TE1PA-ONO ligand in relation to parent HTE1PA. The novel complex described here is able to recognize amyloid plaques in brain sections from Alzheimer's disease patients and shows low toxicity to human neuronal cells.

Graphical abstract

正电子发射断层扫描(PET)成像的a β斑块,是公认的一种工具,用于诊断阿尔茨海默病。利用PET医学成像技术,分十步合成了一种新的铜配合物[Cu(TE1PA-ONO)]+,为疾病早期诊断的新策略的发展做出贡献。我们策略的关键步骤是通过一个成功且具有挑战性的Buchwald-Hartwig偶联反应,将单古碱- n -烷基化环聚糖基配体与能够识别β斑块的片段偶联。据我们所知,这是第一次使用这种策略来功能化多氮杂环衍生物。在MeOH/H2O溶剂中测定的热力学稳定性常数表明,该部分的附着不会削弱TE1PA-ONO配体相对于母体HTE1PA的螯合性能。这里描述的新型复合物能够识别阿尔茨海默病患者脑切片中的淀粉样斑块,并显示对人类神经元细胞的低毒性。
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引用次数: 0
In vitro and in vivo accumulation of the anticancer Ru complexes [RuII(cym)(HQ)Cl] and [RuII(cym)(PCA)Cl]Cl 抗癌络合物[RuII(cym)(HQ)Cl]和[RuII(cym)(PCA)Cl]Cl的体外和体内积累。
IF 3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-14 DOI: 10.1007/s00775-023-02026-w
Mie Riisom, Stuart J. Morrow, Caitlin D. Herbert, William D. J. Tremlett, Jonathan W. Astin, Stephen M. F. Jamieson, Christian G. Hartinger

The cellular accumulation and the underlying mechanisms for the two ruthenium-based anticancer complexes [RuII(cym)(HQ)Cl] 1 (cym = η6-p-cymene, HQ = 8-hydroxyquinoline) and [RuII(cym)(PCA)Cl]Cl 2 (PCA = N-fluorophenyl-2-pyridinecarbothioamide) were investigated in HCT116 human colorectal carcinoma cells. The results showed that the cellular accumulation of both complexes increased over time and with higher concentrations, and that 2 accumulates in greater quantities in cells than 1. Inhibition studies of selected cellular accumulation mechanisms indicated that both 1 and 2 may be transported into the cells by both passive diffusion and active transporters, similar to cisplatin. Efflux experiments indicated that 1 and 2 are subjected to efflux through a mechanism that does not involve p-glycoprotein, as addition of verapamil did not make any difference. Exploring the influence of the Cu transporter by addition of CuCl2 resulted in a higher accumulation of 1 and 2 whilst the amount of Pt detected was slightly reduced when cells were treated with cisplatin. Complexes 1 and 2 were further explored in zebrafish where accumulation and distribution were determined with ICP-MS and LA-ICP-MS. The results correlated with the in vitro observations and zebrafish treated with 2 showed higher Ru contents than those treated with 1. The distribution studies suggested that both complexes mainly accumulated in the intestines of the zebrafish.

Graphical abstract

研究了两种钌基抗癌复合物[RuII(cym)(HQ)Cl] 1 (cym = φ 6-p-cymene, HQ = 8-羟基喹啉)和[RuII(cym)(PCA)Cl]Cl 2 (PCA = n -氟苯基-2-吡啶碳硫酰胺)在HCT116人结直肠癌细胞中的积累及其机制。结果表明,这两种复合物的细胞积累随着时间和浓度的增加而增加,其中2在细胞中的积累量大于1。选择性细胞积累机制的抑制研究表明,1和2可能通过被动扩散和主动转运体转运到细胞中,类似于顺铂。外排实验表明1和2通过不涉及p糖蛋白的机制进行外排,因为维拉帕米的添加没有任何影响。通过添加CuCl2来探索Cu转运体的影响导致1和2的积累增加,而顺铂处理细胞时检测到的Pt量略有减少。利用ICP-MS和LA-ICP-MS测定了配合物1和2在斑马鱼体内的积累和分布。结果与体外观察结果相关,2处理的斑马鱼Ru含量高于1处理的斑马鱼。分布研究表明,这两种复合物主要积聚在斑马鱼的肠道中。
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引用次数: 0
Dinuclear gold(I) complexes based on carbene and diphosphane ligands: bis[2-(dicyclohexylphosphano)ethyl]amine complex inhibits the proteasome activity, decreases stem cell markers and spheroid viability in lung cancer cells 基于碳烯和二膦配体的双核金(I)配合物:双[2-(双环己基磷酸)乙基]胺配合物抑制蛋白酶体活性,降低肺癌细胞干细胞标记物和球体活力。
IF 3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-13 DOI: 10.1007/s00775-023-02025-x
Naike Casagrande, Cinzia Borghese, Giuseppe Corona, Donatella Aldinucci, Muhammad Altaf, Adam A. A. Sulaiman, Anvarhusein A. Isab, Saeed Ahmad, Abdul Malik P. Peedikakkal

Three new dinuclear gold(I) complexes (13) containing a carbene (1,3-Bis(2,6-di-isopropylphenyl)imidazol-2-ylidene (IPr)) and diphosphane ligands [bis(1,2-diphenylphosphano)ethane (Dppe), bis(1,3-diphenylphosphano)propane (Dppp) and bis[2-(dicyclohexylphosphano)ethyl]amine (DCyPA)], were synthesized and characterized by elemental analysis and, ESI–MS, mid FT-IR and NMR spectroscopic methods. The structures of complexes 2 and 3 were determined by X-ray crystallography, which revealed that the complexes are dinuclear having gold(I) ions linearly coordinated. The anticancer activities of the complexes (1–3) were evaluated in lung (A549), breast (MC-F7), prostate (PC-3), osteosarcoma (MG-63) and ovarian (A2780 and A2780cis) cancer models. Growth inhibition by the new complexes was higher than cisplatin in all cell lines tested. The mechanism of action of complex 3 was investigated in A549 cells using 2-dimensional (2D) models and 3D-multicellular tumor spheroids. Treatment of A549 cells with complex 3 caused: the induction of apoptosis and the generation of reactive oxygen species; the cell cycle arrest in the G0/G1 phase; the inhibition of both the proteasome and the NF-kB activity; the down-regulation of lung cancer stem cell markers (NOTCH1, CD133, ALDH1 and CD44). Complex 3 was more active than cisplatin also in 3D models of A549 lung cancer cells.

Grahical abstract

合成了三种新的双核金(I)配合物(1-3),其中含有1,3-二(2,6-二异丙基苯基)咪唑-2-酰基(IPr))和二膦配体[2(1,2-二苯基磷)乙烷(Dppe), 2(1,3-二苯基磷)丙烷(Dppp)和2-(双环己基磷)乙基]胺(DCyPA)],并通过元素分析、ESI-MS、mid - FT-IR和NMR等方法对其进行了表征。通过x射线晶体学对配合物2和3的结构进行了分析,结果表明配合物为双核结构,金离子线性配位。在肺癌(A549)、乳腺癌(MC-F7)、前列腺癌(PC-3)、骨肉瘤(MG-63)和卵巢癌(A2780和A2780cis)模型中评价复合物(1-3)的抗癌活性。新复合物对所有细胞系的生长抑制作用均高于顺铂。利用二维(2D)模型和三维多细胞肿瘤球体研究复合物3在A549细胞中的作用机制。复合物3对A549细胞的处理引起:诱导细胞凋亡和活性氧的产生;细胞周期停留在G0/G1期;蛋白酶体和NF-kB活性均受到抑制;肺癌干细胞标志物(NOTCH1、CD133、ALDH1和CD44)的下调。复合物3在A549肺癌细胞的3D模型中也比顺铂更有活性。
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引用次数: 0
Circular permutation at azurin’s active site slows down its folding azurin活性位点的环状排列减慢了它的折叠速度。
IF 3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-13 DOI: 10.1007/s00775-023-02023-z
Debanjana Das, Sri Rama Koti Ainavarapu

Circular permutation (CP) is a technique by which the primary sequence of a protein is rearranged to create new termini. The connectivity of the protein is altered but the overall protein structure generally remains unperturbed. Understanding the effect of CP can help design robust proteins for numerous applications such as in genetic engineering, optoelectronics, and improving catalytic activity. Studies on different protein topologies showed that CP usually affects protein stability as well as unfolding rates. Though a significant number of proteins contain metals or other cofactors, reports of metalloprotein CPs are rare. Thus, we chose a bacterial metalloprotein, azurin, and its CP within the metal-binding site (cpF114). We studied the stabilities, folding, and unfolding rates of apo- and Zn2+-bound CP azurin using fluorescence and circular dichroism. The introduced CP had destabilizing effects on the protein. Also, the folding of the Zn2+-CP protein was much slower than that of the Zn2+-WT or apo-protein. We compared this study to our previously reported azurin-cpN42, where we had observed an equilibrium and kinetic intermediate. cpF114 exhibits an apparent two-state equilibrium unfolding but has an off-pathway kinetic intermediate. Our study hinted at CP as a method to modify the energy landscape of proteins to alter their folding pathways. WT azurin, being a faster folder, may have evolved to optimize the folding rate of metal-bound protein compared to its CPs, albeit all of them have the same structure and function. Our study underscores that protein sequence and protein termini positions are crucial for metalloproteins.

Graphical abstract

TOC Figure. (Top) Zn2+-azurin WT structure (PDB code: 1E67) and 2-D topology diagram of Zn2+-cpF114 azurin. (Bottom) Cartoon diagram representing folding (red arrows) and unfolding (blue arrows) of apo- and Zn2+- WT and cpF114 azurins. The width of the arrows represents the rate of the corresponding processes.

环状排列(CP)是一种将蛋白质的原序列重新排列以产生新末端的技术。蛋白质的连通性被改变,但蛋白质的整体结构通常保持不变。了解CP的作用可以帮助设计健壮的蛋白质,用于许多应用,如基因工程、光电子学和提高催化活性。对不同蛋白质拓扑结构的研究表明,CP通常会影响蛋白质的稳定性和展开速率。虽然大量蛋白质含有金属或其他辅助因子,但关于金属蛋白CPs的报道很少。因此,我们选择了一种细菌金属蛋白azurin及其金属结合位点内的CP (cpF114)。我们利用荧光和圆二色性研究了apo-和Zn2+结合的CP azurin的稳定性、折叠和展开率。引入的CP对蛋白质具有不稳定作用。此外,Zn2+-CP蛋白的折叠速度也比Zn2+-WT或载脂蛋白慢得多。我们将这项研究与我们之前报道的azurin-cpN42进行了比较,在那里我们观察到一个平衡和动力学中间产物。cpF114表现出明显的两态平衡展开,但有一个非通路的动力学中间体。我们的研究暗示CP是一种改变蛋白质能量格局以改变其折叠途径的方法。WT azurin作为一种更快的折叠器,可能已经进化到优化金属结合蛋白的折叠速率,尽管它们都具有相同的结构和功能。我们的研究强调了蛋白质序列和蛋白质末端位置对金属蛋白至关重要。TOC的人物。(上)Zn2+-azurin WT结构(PDB代码:1E67)和Zn2+-cpF114 azurin的二维拓扑图。(下)apo-、Zn2+- WT和cpF114 azurins的折叠(红色箭头)和展开(蓝色箭头)的卡通图。箭头的宽度表示相应过程的速率。
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引用次数: 0
Synthesis, antimicrobial activity and molecular docking study of benzyl functionalized benzimidazole silver(I) complexes 苄基官能化苯并咪唑-银(I)配合物的合成、抗菌活性及分子对接研究。
IF 3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-07 DOI: 10.1007/s00775-023-02024-y
Erkan Arı, Neslihan Şahin, Elvan Üstün, Muhammed Dündar, Hüseyin Karcı, İlknur Özdemir, Ahmet Koç, Nevin Gürbüz, İsmail Özdemir

In this study, a series of N-functionalized benzimidazole silver(I) complexes were prepared and characterized by FT-IR, 1H, 13C{1H} NMR spectroscopy, and elemental analysis. Synthesized N-benzylbenzimidazole silver(I) complexes were evaluated for their antimicrobial activities against bacteria Escherichia coli, Pseudomonas aeruginosa, Staphylococcus aureus, and the fungal strains Candida albicans and Candida glabrata. The results indicated that N-alkylbenzimidazole silver(I) complexes exhibited good antimicrobial activity compared to N-alkylbenzimidazole derivatives. Especially, complex 2e presented perfect antimicrobial activity than the other complexes. The characterized molecules were optimized by DFT-based calculation methods and the optimized molecules were analyzed in detail by molecular docking methods against bacterial DNA-gyrase and CYP51. The amino acid residues detected for both target molecules are consistent with expectations, and the calculated binding affinities and inhibition constants are promising for further studies.

Graphical abstract

A series of N-alkylbenzimidazole silver(I) complexes were synthesized and fully characterized by means of 1H NMR, 13C NMR, and FT-IR spectroscopies. Synthesized N-alkylbenzimidazole silver(I) complexes were investigated for their antimicrobial activities against bacteria Escherichia coli, Pseudomonas aeruginosa, Staphylococcus aureus, and the fungal strains Candida albicans and Candida glabrata. All complexes showed better activity according to Ampicilin against Pseudomonas aeruginosa. The molecules which were firstly optimized by DFT-based calculation methods were also analyzed by molecular docking methods against DNA gyrase of E. Coli and CYP51. 338 × 190 mm (96 × 96 DPI)

在本研究中,制备了一系列N-官能化苯并咪唑-银(I)配合物,并通过FT-IR、1H、13C{1H}NMR光谱和元素分析对其进行了表征。评价了合成的N-苄基苯并咪唑-银(I)配合物对大肠杆菌、铜绿假单胞菌、金黄色葡萄球菌以及真菌株白色念珠菌和光滑念珠菌的抗菌活性。结果表明,与N-烷基苯并咪唑衍生物相比,N-烷基苯并咪唑银(I)配合物具有良好的抗菌活性。特别是配合物2e比其它配合物具有更好的抗菌活性。通过基于DFT的计算方法对表征的分子进行优化,并通过针对细菌DNA聚合酶和CYP51的分子对接方法对优化的分子进行详细分析。两种靶分子检测到的氨基酸残基与预期一致,计算出的结合亲和力和抑制常数有望用于进一步研究。合成了一系列N-烷基苯并咪唑银(I)配合物,并用1H NMR、13C NMR和FT-IR对其进行了表征。研究了合成的N-烷基苯并咪唑银(I)配合物对大肠杆菌、铜绿假单胞菌、金黄色葡萄球菌以及真菌白色念珠菌和光滑念珠菌的抗菌活性。根据氨苄青霉素,所有复合物对铜绿假单胞菌都显示出更好的活性。利用基于DFT的计算方法对首次优化的分子进行了针对大肠杆菌DNA聚合酶和CYP51的分子对接分析。338 × 190毫米(96 × 96dpi)。
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引用次数: 0
A novel palladium complex with a coumarin-thiosemicarbazone hybrid ligand inhibits Trypanosoma cruzi release from host cells and lowers the parasitemia in vivo 一种新的含有香豆素缩氨基脲杂化配体的钯络合物抑制了克氏锥虫从宿主细胞中的释放,并降低了体内寄生虫病。
IF 3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-09-28 DOI: 10.1007/s00775-023-02020-2
Santiago Rostán, Samuel Porto, Cesar L. N. Barbosa, Diego Assis, Natalia Alvarez, Fabiana Simão Machado, Graciela Mahler, Lucía Otero

In this work, two analogous coumarin-thio and semicarbazone hybrid compounds were prepared and evaluated as a potential antichagasic agents. Furthermore, palladium and platinum complexes with the thiosemicarbazone derivative as ligand (L1) were obtained in order to establish the effect of metal complexation on the antiparasitic activity. All compounds were fully characterized both in solution and in solid state including the resolution of the crystal structure of the palladium complex by X-ray diffraction methods. Unexpectedly, all experimental and theoretical characterizations in the solid state, demonstrated that the obtained palladium and platinum complexes are structurally different: [PdCl(L1)] and [PtCl2(HL1)]. All the studied compounds lower the proliferation of the amastigote form of Trypanosoma cruzi while some of them also have an effect on the trypomastigote stage. Additionally, the compounds inhibit T. cruzi release from host cells in variable extents. The Pd compound presented a remarkable profile in all the in vitro experiments, and it showed no toxicity for mammalian cells in the assayed concentrations. In this sense, in vivo experiments were performed for this compound using an acute model of Chagas disease. Results showed that the complex significantly lowered the parasite count in the mice blood with no significant toxicity.

Graphical abstract

在本工作中,制备了两种类似的香豆素-硫代和氨基脲杂化化合物,并对其作为潜在的抗癌剂进行了评价。此外,获得了以氨基硫脲衍生物为配体(L1)的钯和铂络合物,以确定金属络合对抗寄生虫活性的影响。所有化合物在溶液和固态下都得到了充分的表征,包括通过X射线衍射方法对钯络合物的晶体结构的分辨率。出乎意料的是,固态下的所有实验和理论表征都表明,获得的钯和铂络合物在结构上不同:[PdCl(L1)]和[PtCl2(HL1)]。所有研究的化合物都降低了克鲁兹锥虫无鞭毛虫形式的增殖,而其中一些化合物也对锥虫期有影响。此外,这些化合物在不同程度上抑制克氏锥虫从宿主细胞中释放。Pd化合物在所有体外实验中都表现出显著的特征,并且在所测定的浓度下对哺乳动物细胞没有毒性。从这个意义上讲,使用恰加斯病的急性模型对该化合物进行了体内实验。结果表明,该复合物显著降低了小鼠血液中的寄生虫计数,没有显著毒性。
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引用次数: 0
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JBIC Journal of Biological Inorganic Chemistry
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