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2019 Computing in Cardiology (CinC)最新文献

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An Automated Device for Recording Peripheral Arterial Waveform 一种记录外周动脉波形的自动装置
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005815
T. Panula, J. Blomster, Mikko Pänkäälä, T. Koivisto, M. Kaisti
The aim of the study was to develop an automated device for recording peripheral arterial pulse wave, in order to assess cardiovascular health. Recent studies have shown that photoplethysmography (PPG) is a viable technique to measure peripheral pressure waveform. We developed a small motorized device that can measure pulse waveform from a finger. The device targets the distal transverse palmar arch (DTPA) artery using infrared wavelength PPG. Measurements were taken from healthy subjects (n = 8).The device was validated by performing HR detection and waveform analysis. The device was able to record high quality blood pressure calibrated arterial waveforms and detect beat-to-beat heart rate allowing the assessment of cardiovascular health status.
本研究的目的是开发一种自动记录外周动脉脉搏波的装置,以评估心血管健康状况。近年来的研究表明,光容积脉搏波(PPG)是一种可行的外周压力波形测量技术。我们开发了一种小型机动装置,可以测量手指的脉冲波形。该装置利用红外波长PPG瞄准远端掌横弓(DTPA)动脉。测量数据取自健康受试者(n = 8)。设备通过HR检测和波形分析进行验证。该设备能够记录高质量的血压校准动脉波形,并检测心跳速率,从而评估心血管健康状况。
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引用次数: 1
Artificially Generated Training Datasets for Supervised Machine Learning Techniques in Magnetic Resonance Imaging: An Example in Myocardial Segmentation 磁共振成像中用于监督机器学习技术的人工生成训练数据集:以心肌分割为例
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005762
C. Xanthis, K. Haris, D. Filos, A. Aletras
Machine learning techniques have become increasingly successful over the last few years in medical image analysis and radiology. However, the low availability, relativeness and size of the training data sets required by the associated learning algorithms prevents their further development or delays their application in clinical practice.This study presented for the first time the development of artificially generated training datasets for supervised learning techniques through the incorporation of a realistic simulation framework in the field of Magnetic Resonance Imaging (MRI). An example in left-ventricle segmentation was utilized and the performance of a fully convolutional network on true cardiac MR data was evaluated.
在过去的几年里,机器学习技术在医学图像分析和放射学方面变得越来越成功。然而,相关学习算法所需的训练数据集的低可用性、相对性和规模阻碍了它们的进一步发展或延迟了它们在临床实践中的应用。本研究通过结合磁共振成像(MRI)领域的现实模拟框架,首次提出了为监督学习技术人工生成训练数据集的发展。以左心室分割为例,对全卷积网络在真实心脏MR数据上的性能进行了评价。
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引用次数: 0
The Signature-Based Model for Early Detection of Sepsis From Electronic Health Records in the Intensive Care Unit 基于签名的重症监护病房电子健康记录败血症早期检测模型
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005805
James Morrill, A. Kormilitzin, A. Nevado-Holgado, S. Swaminathan, Sam, Howison, Terry Lyons
Optimal feature selection leads to enhanced efficiency and accuracy when developing both supervised and unsupervised machine-learning models. In this work, a new signature-based regression model is proposed to automatically identify a patient's risk of sepsis based on physiological data streams and to make a positive or negative prediction ofsepsis for every time interval since admission to the intensive care unit. The gradient boosting machine algorithm that uses the features at the current time-points and the signature features extracted from the time-series to model the longitudinal effects ofsepsis yields the utility function score of 0.360 (officially ranked 1st, team name: ‘Can I get your Signature?’) on the full test set. The signature method shows a systematic and competitive approach to model sepsis by learning from health data streams.
在开发有监督和无监督机器学习模型时,最优特征选择可以提高效率和准确性。在这项工作中,提出了一种新的基于特征的回归模型,可以根据生理数据流自动识别患者的脓毒症风险,并在进入重症监护室后的每个时间间隔内对脓毒症进行阳性或阴性预测。梯度增强机算法使用当前时间点的特征和从时间序列中提取的签名特征来模拟脓毒症的纵向影响,在完整的测试集上,效用函数得分为0.360(官方排名第一,团队名称:Can I get your signature ?)签名方法显示了一种通过从健康数据流中学习来模拟败血症的系统和竞争性方法。
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引用次数: 46
A Review of Bandwidth for Pediatric ECGs 儿童心电图带宽研究综述
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005925
S. Luo, Hong Wei, P. Macfarlane
ECGs from neonates are known to have a higher frequency content than adult ECGs.The aim of the study was to determine the effect of using different filter bandwidths on neonatal ECGs initially sampled at a rate of 8000 samples per second (which permits the use of a signal bandwidth much higher than 150 Hz) and to consider the implications for routine ECG recording.48 ECGs were recorded from newly born term infants (0-48 hours postnatal) at Princess Royal Maternity Hospital, Glasgow on a Burdick 8500 electrocardiograph. The frequency response of the machine was carefully checked. Peak to peak QRS amplitudes of average beats of the 10 second recordings were measured in all 8 independent leads with the results obtained at the full bandwidth of the ECG machine regarded as the reference.The full bandwidth of the 8500 was verified as 0.05 – 540Hz. It was found that the recommended upper frequency cutoff of 250Hz in the current guideline does not meet the goal of amplitude errors <25 μV in >95% of the cases in this data set. The clinical significance of high frequency components in pediatric ECGs is currently unclear.
已知新生儿心电图比成人心电图具有更高的频率含量。该研究的目的是确定使用不同滤波器带宽对新生儿心电图的影响,最初以每秒8000个样本的速率采样(允许使用远高于150 Hz的信号带宽),并考虑对常规心电图记录的影响在格拉斯哥皇家公主妇产医院用Burdick 8500心电图仪记录新生儿的心电图(出生后0-48小时)。仔细检查了机器的频率响应。在所有8个独立导联上测量10秒记录的平均拍频的峰对峰QRS幅度,并以心电机全带宽下的结果为参考。8500的全带宽被验证为0.05 - 540Hz。研究发现,在本数据集中95%的情况下,现行指南中推荐的上频率截止为250Hz并不能满足幅度误差的目标。高频成分在儿童心电图中的临床意义目前尚不清楚。
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引用次数: 0
A Multi-Task Imputation and Classification Neural Architecture for Early Prediction of Sepsis from Multivariate Clinical Time Series 基于多变量临床时间序列的脓毒症早期预测的多任务归算和分类神经结构
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005751
Yale Chang, Jonathan Rubin, G. Boverman, S. Vij, Asif Rahman, A. Natarajan, S. Parvaneh
Early prediction of sepsis onset can notify clinicians to provide timely interventions to patients to improve their clinical outcomes. The key question motivating this work is: given a retrospective patient cohort consisting of multivariate clinical time series (e.g., vital signs and lab measurement) and patients' demographics, how to build a model to predict the onset of sepsis six hours earlier? To tackle this challenge, we first used a recurrent imputation for time series (RITS) approach to impute missing values in multivariate clinical time series. Second, we applied temporal convolutional networks (TCN) to the RITS-imputed data. Compared to other sequence prediction models, TCN can effectively control the size of sequence history. Third, when defining the loss function, we assigned custom time- dependent weights to different types of errors. We achieved 9th place (team name = prna, utility score = 0.328) at the 2019 PhysioNet Computing in Cardiology Challenge, which evaluated our proposed model on a real-world sepsis patient cohort. At a follow-up ‘hackathon’ event, held by the challenge organizers, an improved version of our algorithm achieved 2nd place (utility score = 0.342).
早期预测脓毒症的发生可以通知临床医生及时对患者进行干预,以改善其临床结果。激励这项工作的关键问题是:给定一个由多变量临床时间序列(例如,生命体征和实验室测量)和患者人口统计学组成的回顾性患者队列,如何建立一个模型来预测6小时前败血症的发作?为了解决这一挑战,我们首先使用了时间序列的循环归算(RITS)方法来归算多变量临床时间序列中的缺失值。其次,我们将时序卷积网络(TCN)应用于rits输入数据。与其他序列预测模型相比,TCN可以有效地控制序列历史的大小。第三,在定义损失函数时,我们为不同类型的误差分配了自定义的时间相关权重。我们在2019年的PhysioNet计算心脏病学挑战赛中获得了第9名(团队名称= prna,效用得分= 0.328),该挑战赛在现实世界的脓毒症患者队列中评估了我们提出的模型。在挑战赛组织者举办的后续“黑客马拉松”活动中,我们算法的改进版本获得了第二名(效用得分= 0.342)。
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引用次数: 11
Automated 3D MRI Aortic Morphometry Demonstrates the Added Value of Volumes as Compared to Diameters 自动3D MRI主动脉形态测量显示体积相对于直径的附加价值
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005743
T. Dietenbeck, Sophia Houriez--Gombaud-Saintonge, U. Gencer, A. Giron, G. Soulat, É. Mousseaux, P. Cluzel, A. Redheuil, N. Kachenoura
Aim: The diagnosis of thoracic aortic aneurysm is based on local aortic deformation associated to excessive aortic diameter (D). Maximal local aortic diameter was shown to be below the recommended surgical threshold in 30% of patients who ultimately developed aortic dissection. Aortic volumes integrate both dilation and elongation and may be more sensitive to changes in aortic geometry and less dependent on slice orientation and obliquity than diameter measurements. Methods: We studied 278 asymptomatic individuals with 3D aortic MRI: 119 healthy volunteers (hC), 53 hypertensive patients (HT) and 106 patients with dilated ascending aorta of which 62 with tricuspid (APt) and 44 with bicuspid (APb) aortic valve. Automated 3D aortic segmentation was performed and aortic lengths, maximal diameters and volumes were measured from sino-tubular junction to the brachiocephalic trunk for the ascending aorta (AAo) and from the left subclavian artery to the diaphragm for the descending aorta (DAo). Results: While AAo D increased by 40% between APt and HC, AAo volume increased by 170%. Moreover, when comparing HT patients with controls, AAo volume difference was significant (p < 0.05) even after adjustment to BSA while AAo D was not. Conclusion: Aortic volumes measured automatically from 3D MRI were able to characterize subclinical and pathological dilation more accurately than maximal diameters.
目的:胸主动脉瘤的诊断是基于与主动脉直径过大相关的局部主动脉变形(D)。在最终发生主动脉夹层的患者中,30%的局部主动脉最大直径低于推荐的手术阈值。与直径测量相比,主动脉容积综合了扩张和延伸,对主动脉几何形状的变化更敏感,对切片方向和倾角的依赖更小。方法:对278例无症状患者进行三维主动脉MRI检查,其中健康志愿者119例,高血压患者53例,升主动脉扩张患者106例,其中三尖瓣(APt) 62例,二尖瓣(APb) 44例。进行自动三维主动脉分割,测量升主动脉(AAo)从管状动脉交界处到头臂干,降主动脉(DAo)从左锁骨下动脉到横膈膜的主动脉长度、最大直径和体积。结果:AAo D在APt和HC之间增加40%,AAo体积增加170%。此外,与对照组相比,即使调整BSA, AAo体积也有显著差异(p < 0.05),而AAo D无显著差异。结论:3D MRI自动测量的主动脉容积比最大直径更能准确地表征亚临床和病理性扩张。
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引用次数: 1
Non-Invasive Localization of Atrial Flutter Circuit Using Recurrence Quantification Analysis and Machine Learning 应用递归量化分析和机器学习的心房扑动回路无创定位
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005844
Muhammad Haziq Kamarul Azman, Olivier Meste, D. Latcu, K. Kadir
Atrial flutter presents quasi-periodic atrial activity due to circular depolarization. Given the different structure of right and left atria, spatiotemporal variability should be different. This was analyzed using recurrence quantification analysis. Autocorrelation signals were estimated from the unthresholded recurrence plot, calculated with a properly processed ECG to remove variability related to external sources (noise, respiratory motion, T wave overlap). Simple features were considered from the autocorre-lation that attempts to describe the atrial activity in terms of range of recurrence and periodicity. Linear classification using support vector machines and logistic regression both allowed good classification performance (max accuracy 0.8 for both). Feature selection showed that right and left AFL have significantly different cycle lengths (right vs. left: 230.63 ms vs. 206.50 ms, p < 0.01).
心房扑动由于圆去极化而呈现准周期性心房活动。由于左右心房结构不同,其时空变异性也不同。使用递归定量分析进行分析。从无阈值递归图中估计自相关信号,并使用经过适当处理的ECG进行计算,以去除与外部源(噪声、呼吸运动、T波重叠)相关的变异性。简单的特征是考虑自相关,试图描述心房活动的复发和周期性的范围。使用支持向量机的线性分类和逻辑回归都有很好的分类性能(两者的最大准确率为0.8)。特征选择结果显示,左、右AFL的周期长度存在显著差异(左、右分别为230.63 ms和206.50 ms, p < 0.01)。
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引用次数: 1
Causal Relationship Analysis of Heart Rate Variability and Band Power Time Series of Electroencephalographic Signals 心率变异性与脑电图信号带功率时间序列的因果关系分析
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005719
MariNieves Pardo-Rodrı́guez, E. Bojorges-Valdez, O. Yáñez-Suárez
This study aimed to find whether there is a causal relationship between band power time series (BPts) extracted from EEG and heart rate variability (HRV). Such relationships were explored during spontaneous and a controlled breathing tasks. Data analyzed were recordings obtained from 14 healthy subjects using one ECG lead and 21 EEG channels. The RR intervals from the ECG were used to obtain the HRV signal, which was decomposed with Empirical Mode Decomposition into components of different spectral content known as intrinsic mode functions (IMFs). Granger causality tests were run for the BPts of alpha, beta and gamma frequency ranges of the EEG signal and the HRV signals IMFs. G-causality increased for three different conditions: slower IMFs (IMF4), BPts of higher frequency (gamma) band and during task realization. Meaning, gamma’s BPts G-caused HRV for a larger number of subjects and channels. Also there was a larger incidence on the number of channels that G-caused HRV during the controlled breathing task. The causal influence from the BPts of EEG signals to the HRV IMFs suggests there is an indirect or unobserved interaction between instantaneous changes on EEG band power and components of HRV which may explain changes in its dynamics.
本研究旨在探讨EEG提取的频带功率时间序列(BPts)与心率变异性(HRV)之间是否存在因果关系。这种关系是在自发和控制呼吸任务中探索的。分析的数据来自14名健康受试者,使用1个心电图导联和21个脑电图通道。利用心电信号的RR区间得到HRV信号,利用经验模态分解(Empirical Mode Decomposition)将HRV信号分解为不同谱含量分量的内禀模态函数(IMFs)。对脑电图信号的α、β和γ频率范围的bpt和HRV信号的imf进行格兰杰因果检验。g -因果关系在三种不同的条件下增加:较慢的imf (IMF4),较高频率(gamma)频带的bpt和任务实现期间。也就是说,伽玛的BPts导致了大量受试者和通道的HRV。在控制呼吸任务中,g引起HRV的通道数量也有较大的发生率。脑电信号的bpt对HRV IMFs的因果影响表明,在脑电频带功率的瞬时变化与HRV分量之间存在间接或未观察到的相互作用,这可能解释了其动态变化。
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引用次数: 0
Multivariate Classification of Brugada Syndrome Patients Based on the Autonomic Response During Sleep, Exercise and Head-up Tilt Testing 基于自主神经反应的Brugada综合征患者睡眠、运动和平视倾斜测试的多变量分类
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005882
M. Calvo, V. Rolle, D. Romero, N. Béhar, P. Gomis, P. Mabo, Alfredo I. Hernández
Several autonomic markers were estimated overnight and during exercise and head-up tilt (HUT) testing for 44 BS patients, to design classifiers capable of distinguishing patients at different levels of risk. The classification performance of predictive models built from the optimization of a step-based machine-learning method were compared, so as to identify those autonomic protocols and markers best distinguishing between symptomatic and asymptomatic patients. Although exercise and HUT testing together led to better predictive results than when they were separately assessed, among all analyzed combinations, the night-based classifier presented the best performance (AUC = 95%), using the least amount of features. This optimal features subset was mostly composed of markers extracted between 4 a.m. - 5 a.m. Thus, results provide further evidence for the role of nighttime analysis, mainly during the last hours of sleep, for risk stratification in BS.
对44名BS患者进行夜间、运动和头向上倾斜(HUT)测试时的几种自主神经标志物进行评估,以设计能够区分不同风险水平患者的分类器。比较基于步进的机器学习方法优化构建的预测模型的分类性能,以确定最能区分有症状和无症状患者的自主协议和标记。虽然运动和HUT测试一起比单独评估时产生更好的预测结果,但在所有分析组合中,使用最少特征的基于夜间的分类器表现出最佳性能(AUC = 95%)。这个最佳特征子集主要由凌晨4点至5点之间提取的标记组成。因此,结果为夜间分析(主要是在睡眠的最后几个小时)在BS风险分层中的作用提供了进一步的证据。
{"title":"Multivariate Classification of Brugada Syndrome Patients Based on the Autonomic Response During Sleep, Exercise and Head-up Tilt Testing","authors":"M. Calvo, V. Rolle, D. Romero, N. Béhar, P. Gomis, P. Mabo, Alfredo I. Hernández","doi":"10.23919/CinC49843.2019.9005882","DOIUrl":"https://doi.org/10.23919/CinC49843.2019.9005882","url":null,"abstract":"Several autonomic markers were estimated overnight and during exercise and head-up tilt (HUT) testing for 44 BS patients, to design classifiers capable of distinguishing patients at different levels of risk. The classification performance of predictive models built from the optimization of a step-based machine-learning method were compared, so as to identify those autonomic protocols and markers best distinguishing between symptomatic and asymptomatic patients. Although exercise and HUT testing together led to better predictive results than when they were separately assessed, among all analyzed combinations, the night-based classifier presented the best performance (AUC = 95%), using the least amount of features. This optimal features subset was mostly composed of markers extracted between 4 a.m. - 5 a.m. Thus, results provide further evidence for the role of nighttime analysis, mainly during the last hours of sleep, for risk stratification in BS.","PeriodicalId":6697,"journal":{"name":"2019 Computing in Cardiology (CinC)","volume":"24 1","pages":"Page 1-Page 4"},"PeriodicalIF":0.0,"publicationDate":"2019-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"80918011","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of CARTO LAT Maps and Non-Invasive Activation Maps for Patients with Intraventricular Conduction Disturbance During Sinus Rhythm 窦性心律时脑室传导障碍患者的CARTO LAT图与无创激活图的比较
Pub Date : 2019-09-01 DOI: 10.23919/CinC49843.2019.9005738
M. Budanova, M. Chmelevsky, S. Zubarev, D. Potyagaylo, B. Rudic, E. Tueluemen, M. Borggrefe
Non-invasive electrocardiographic imaging (ECGI) shows high accuracy for topical diagnosis of focal arrhythmias. Activation maps obtained by ECGI allow for the analysis of excitation propagation during sinus rhythm with conduction disturbances. Nevertheless, noninvasive activation patterns have not been compared with the results of invasive mapping. In this article, we present the results of a qualitative comparison of non-invasive activation maps and CARTO LAT maps.
无创心电图(ECGI)对局灶性心律失常的局部诊断具有较高的准确性。ECGI获得的激活图允许分析传导干扰的窦性心律期间的兴奋传播。然而,非侵入性激活模式尚未与侵入性测绘结果进行比较。在本文中,我们提出了非侵入性激活图和CARTO LAT图的定性比较结果。
{"title":"Comparison of CARTO LAT Maps and Non-Invasive Activation Maps for Patients with Intraventricular Conduction Disturbance During Sinus Rhythm","authors":"M. Budanova, M. Chmelevsky, S. Zubarev, D. Potyagaylo, B. Rudic, E. Tueluemen, M. Borggrefe","doi":"10.23919/CinC49843.2019.9005738","DOIUrl":"https://doi.org/10.23919/CinC49843.2019.9005738","url":null,"abstract":"Non-invasive electrocardiographic imaging (ECGI) shows high accuracy for topical diagnosis of focal arrhythmias. Activation maps obtained by ECGI allow for the analysis of excitation propagation during sinus rhythm with conduction disturbances. Nevertheless, noninvasive activation patterns have not been compared with the results of invasive mapping. In this article, we present the results of a qualitative comparison of non-invasive activation maps and CARTO LAT maps.","PeriodicalId":6697,"journal":{"name":"2019 Computing in Cardiology (CinC)","volume":"277 1","pages":"Page 1-Page 4"},"PeriodicalIF":0.0,"publicationDate":"2019-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83061566","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
期刊
2019 Computing in Cardiology (CinC)
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