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The long-term survival and climatic distribution of mixotrophic and mycoheterotrophic orchids 混养型和霉变型兰花的长期生存和气候分布
IF 1 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-12-28 DOI: 10.5586/asbp/175378
Marta Kolanowska, M. Ruszkiewicz-Michalska
Orchid germination depends on their fungal partner; however, there are no broadscale analyses evaluating the actual overlap between orchids and their mycorrhizal symbionts. The aim of this research was to evaluate the importance of mycorrhizal fungi for the occurrence of two species of orchids using ecological niche modeling (ENM). Two sets of future orchid distribution models were created – the first one was based on bioclimatic data only, and the second one included information about the distribution of fungal symbionts. The jackknife test indicated that for both mixotrophic and mycoheterotrophic orchids, the presence of symbiotic fungi is crucial for their occurrence, and ENM analyses revealed that both orchids face habitat loss as a result of predicted changes in climate. In the case of the mixotrophic orchid, the presence of symbiotic fungi can compensate for unfavorable climatic conditions. Problems and limitations in modeling the distributions of species are discussed in terms of the symbiotic relationship.
兰花的发芽依赖于它们的真菌伙伴;然而,目前还没有大规模的分析来评估兰花与其菌根共生体之间的实际重叠情况。这项研究的目的是利用生态位建模(ENM)评估菌根真菌对两种兰花出现的重要性。研究人员创建了两套未来兰花分布模型,第一套仅基于生物气候数据,第二套包括真菌共生体的分布信息。杰克刀检验结果表明,对于混养型和绵状异养型兰花来说,共生真菌的存在对它们的出现至关重要。就混养兰而言,共生真菌的存在可以弥补不利的气候条件。从共生关系的角度讨论了物种分布建模的问题和局限性。
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引用次数: 0
Factors determining the variability of the size of generative reproduction organs and leaves of Cytisus scoparius (L.) Link in western Poland 决定波兰西部苏铁(Cytisus scoparius (L.) Link)生殖器官和叶片大小变化的因素
IF 1 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-11-23 DOI: 10.5586/asbp/174333
Małgorzata Maj, M. Giertych
Common broom Cytisus scoparius (L.) Link is a native shrub, common both in Europe and Poland and in many other areas of the world, it is considered an invasive plant. e size of the organs of generative reproduction and the factors determining it are still poorly understood. The study of the size of broom flowers, fruits, seeds and leaves was carried out on 16 plots in western Poland. Habitats were described using Ellenberg’s index values, which allowed us to divide the study into two types: warm, rich in nitrogen, and moister with higher pH. It has been shown that a significant part of the variability in the size of flowers and their elements is conditioned by inter-individual differences. Some features (wings and keel area, number of seeds, or nitrogen content in stems) are also dependent on the type of habitat. Probably the key factor influencing the size of generative organs and the number of seeds is the availability of water in the environment. In more moist habitats and with a higher pH, the organs of generative reproduction are larger, and the nitrogen content is lower. The size of individual elements of the perianth is significantly correlated with each other, and the number of seeds depends on the size of the keel. Depending on environmental factors, the size of the generative organs may affect the efficiency of pollination, which in turn determines the size and number of seeds. The ability of C. scoparius to adapt to various edaphic conditions, the ability to establish symbiosis with atmospheric nitrogen-fixing bacteria, and the production of size-diverse flowers that can be pollinated by insects of various sizes determine its invasive success.
普通扫帚 Cytisus scoparius (L.) Link 是一种原生灌木,在欧洲和波兰以及世界许多其他地区都很常见,被认为是一种入侵植物。e 生殖器官的大小及其决定因素仍然鲜为人知。对扫帚花、果实、种子和叶片大小的研究是在波兰西部的 16 块土地上进行的。我们使用艾伦伯格指数值对栖息地进行了描述,从而将研究分为两种类型:温暖、富含氮和湿润、pH 值较高。研究表明,花朵大小及其元素的变化有很大一部分受个体间差异的影响。某些特征(翅和龙骨面积、种子数量或茎中的含氮量)还取决于栖息地的类型。影响生殖器官大小和种子数量的关键因素可能是环境中是否有水。在较潮湿和 pH 值较高的生境中,生殖器官较大,含氮量较低。花被单个元素的大小相互之间有明显的相关性,种子的数量取决于龙骨的大小。根据环境因素的不同,生殖器官的大小可能会影响授粉效率,进而决定种子的大小和数量。莨菪适应各种土壤条件的能力、与大气固氮菌建立共生关系的能力,以及开出大小不一的花朵供不同大小的昆虫授粉的能力,决定了其入侵的成功与否。
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引用次数: 0
Structures, characteristics and functions of fructose-1,6-bisphosphate aldolase in various tissues 果糖-1,6-二磷酸醛缩酶在不同组织中的结构、特性和功能
4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-11-10 DOI: 10.5586/asbp/174253
Lina Yang, Yike Liu, Zhanjun Xue, Qingyun Li, Bingbing Cai
Aldolase exhibits multiple functions in a variety of organisms, including fungi, unicellular algae and plants, and so on. Furthermore, different isoforms of fructose 1,6-bisphosphate aldolase (FBA) exhibit significantly different characteristics and functions. This review describes the structures, characteristics, and functions of FBAs derived from diverse organisms, including FBA II in pathogen microorganisms, as well as FBA I mainly in unicellular algae and plants. Differences between FBA and FBP aldolase-phosphatase bifunctional enzyme (FBA/P) are also discussed. Finally, we suggest several potential research questions regarding the functions of FBA in higher plants.
醛缩酶在多种生物体中具有多种功能,包括真菌、单细胞藻类和植物等。此外,果糖1,6-二磷酸醛缩酶(FBA)的不同异构体表现出显著不同的特性和功能。本文综述了来自不同生物的FBA的结构、特征和功能,包括病原体微生物中的FBA II,以及主要存在于单细胞藻类和植物中的FBA I。还讨论了FBA和FBP醛脲酶-磷酸酶双功能酶(FBA/P)的差异。最后,我们对FBA在高等植物中的功能提出了几个潜在的研究问题。
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引用次数: 0
rDNA-FISH pattern in selected <i>Hieracium</i> species representing different ploidy levels 在选定的&lt;i&gt;Hieracium&lt;/i&gt;代表不同倍性水平的物种
4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-10-20 DOI: 10.5586/asbp/172418
Aleksandra Grabowska-Joachimiak, Dagmara Kwolek, Elżbieta Pięta, Zbigniew Szeląg, Andrzej J. Joachimiak
Polyploid species of Hieracium s.str. are near-obligatory apomicts capable of producing non-reduced pollen grains and intrageneric crossing with sexual diploid species. Most probably, such a mating system leads to the emergence of separate lineages of apomictic plants with increased ploidy levels, each of which has a complete set of genomes of its putative (most probably triploid) apomictic parent. The correct identification of such lineages could facilitate taxonomic and phylogenetic research in Hieracium. In this paper, we analyzed the distribution of the 5S and 45S rDNA segments in the karyotypes of six selected Hieracium taxa, representing all ploidy levels reported in the genus: H. alpinum 2x, H. alpinum 3x, H. schustleri 4x, H. chrysostyloides 5x (H. sect. Alpina) and H. bifidum 3x, H. levicaule 3x (H. sect. Bifida). The analyzed rDNA markers suggest that two taxa of the higher ploidy level (4x and 5x) belonging to H. sect. Alpina inherited three genomes from the triploid H. alpinum, which has 2:1 genomic composition with two genomes from diploid H. alpinum and one genome with an untypical 5S rDNA-bearing chromosome of unknown origin. H. bifidum and H. levicaule differ from each other in the rDNA distribution pattern, which suggests that H. sect. Bifida may be a less homogenous group of species.
<i>山属</i>s.str。是几乎强制性的单合子,能够产生非还原性花粉粒,并与有性二倍体种进行属内杂交。最有可能的是,这样的交配系统导致无杂交植物的独立谱系的出现,这些谱系的倍性水平增加,每个谱系都有一套完整的无杂交亲本基因组(最有可能是三倍体)。这些谱系的正确鉴定可以促进等级科的分类和系统发育研究。在本文中,我们分析了所选的6个<i>Hieracium</i>分类群,代表在属中报告的所有倍性水平;alpinum< / i>2 x, & lt; i> H。alpinum< / i>3 x, & lt; i> H。schustleri< / i>4 x, & lt; i> H。chrysostyloides< / i>5 x (& lt; i> H< / i>。节<i>阿尔卑斯</i>)和<i>H。bifidum< / i>3 x, & lt; i> H。levicaule< / i>3 x (& lt; i> H< / i>。教派。& lt; i> Bifida< / i>)。分析的rDNA标记表明,较高倍性水平的两个类群(4x和5x)属于<i>H</i>教派。& lt; i> Alpina< / i>从三倍体遗传了三个基因组。alpinum</i>,其基因组组成为2:1,其中两个基因组来自二倍体<i>alpinum< / i>另一个基因组带有一条来历不明的非典型5S rdna染色体。& lt; i> H。bifidum< / i>和& lt; i> H。levicaule< / i>rDNA分布格局不同,说明<i>H</i>教派。& lt; i> Bifida< / i>可能是一个不太同质的物种群。
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引用次数: 0
Characterization and phylogenetic analysis of the complete mitochondrial genome of a unique economic plant <i>Lycium barbarum</i> L. 独特经济植物枸杞线粒体全基因组的鉴定与系统发育分析l
4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-10-12 DOI: 10.5586/asbp/170979
Cuiping Guan, Xiang Li, Wenlan Mu, Hong Mu, Shujuan Yang
Lycium barbarum L. (L. barbarum), an important medicinal and food crop from the Solanaceae family, is known for excellent tolerance to saline–alkaline and drought stresses. Therefore, it has significant research and application value. The nuclear and chloroplast genomes of L. barbarum have been previously reported; however, its mitochondrial genome is still unexplored. In this study, mitochondrial DNA sequencing and assembly in L. barbarum were studied via second- and third-generation sequencing technologies using the anthers collected from the main cultivars “Ningqi No.1” (fertile line) and its male-sterile natural mutant “Ningqi No.5” from Ningxia, China. The results revealed that “Ningqi No.1” and “Ningqi No.5” have the same mitochondrial circular genome structure with a total length of 413,881 bp. In total, 61 genes were annotated, including 35 protein-coding genes, four rRNA genes, 22 tRNA genes, and 2,242 open reading frames with unknown functions. The repeat sequences in mtDNA were analyzed, in which short repeats (30–59 bp) exhibited the highest number. Overall, 23 protein-coding genes in “Ningqi No.1” and “Ningqi No.5” exhibited RNA-editing phenomenon, with different RNA-editing site number and distribution position. Phylogenetic analysis demonstrated that L. barbarum has the closest relationship with Hyoscyamus niger. These results provided a basis for a comprehensive understanding of the mitochondrial genome of L. barbarum and the relevant data for omics studies on L. barbarum.
& lt; i>枸杞barbarum< / i>L . (& lt; i> L。巴巴拉姆(barbarum</i>)是茄科重要的药用和粮食作物,以耐盐碱和干旱胁迫而闻名。因此,具有重要的研究和应用价值。L的核基因组和叶绿体基因组。barbarum< / i>以前曾报道过;然而,它的线粒体基因组仍未被探索。在本研究中,线粒体DNA的测序和组装在<i>L。barbarum< / i>以宁夏主要栽培品种“宁七1号”(可育系)及其雄性不育自然突变体“宁七5号”的花药为材料,采用二代和三代测序技术进行了研究。结果表明,“宁七1号”与“宁七5号”线粒体环状基因组结构相同,总长度为413881 bp。共注释61个基因,包括35个蛋白质编码基因、4个rRNA基因、22个tRNA基因和2242个功能未知的开放阅读框。对mtDNA重复序列进行分析,发现短重复序列(30 ~ 59 bp)最多。总体而言,“宁七1号”和“宁七5号”的23个蛋白质编码基因表现出rna编辑现象,但rna编辑位点数量和分布位置不同。系统发育分析表明;barbarum< / i>与Hyoscyamus nig</i>关系最为密切。这些结果为全面了解<i>L线粒体基因组提供了基础。barbarum< / i>以及组学研究的相关数据。barbarum< / i>。
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引用次数: 0
The genus <i>Selaginella</i> P. BEAUV. (Selaginellaceae, Lycopodiopsida) in Poland: The occurrence of three species as a result of the historical material verification 卷柏属&lt;/i&gt;测定。(卷柏科,松柏科)在波兰的分布:经史料考证发现有3种
4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-10-11 DOI: 10.5586/asbp/171688
Ewa Szczęśniak, Edyta M. Gola, Wojciech J. Szypuła
Two species of the Selaginella genus were noted in Poland up to date, i.e. S. selaginoides and S. helvetica. The first species occurs in the Western Carpathians and the Western Sudetes, however, its Sudeten sites were less numerous than previously reported. The second species was one of the rarest elements in Polish flora. Two populations were reported in Silesia (SW Poland), but after 1945 the species was not confirmed in the nature and thus currently it is regarded in Poland as extinct. Its occurrence and locations were given in the literature based on the historical sources, yet without revision of herbarium materials. Our research on Selaginella vouchers, collected from the sites in Silesia and primarily identified as S. helvetica, showed that only one population represented S. helvetica, whereas the second one was identified by us as an alien American species, S. apoda. This is the first record of S. apoda occurrence in Poland out of cultivation, and the second in Europe. Accordingly, corrected maps of S. selaginoides, S. helvetica and S. apoda distribution in Poland together with the identification key to the species are presented.
卷柏属植物</i>到目前为止,在波兰发现了属,即<i>S。selaginoides< / i>和& lt; i> S。helvetica< / i>。第一个物种出现在西喀尔巴阡山脉和西苏台德地区,然而,其苏台德地区的数量比以前报道的要少。第二个物种是波兰植物群中最稀有的元素之一。在西里西亚(波兰西南部)报告了两个种群,但在1945年之后,该物种没有在自然界中得到证实,因此目前在波兰被认为已经灭绝。它的发生和位置在文献中是根据历史资料给出的,而没有对植物标本馆的资料进行修订。我们对卷柏的研究<i>代金券,从西里西亚的站点收集,主要确定为<i>S。helvetica</i>的研究表明,只有一个种群代表美国。而第二种则被我们鉴定为美洲外来物种,<i>S。apoda< / i>。这是波兰第一次在栽培中发现apoda,在欧洲是第二次。因此,修正后的地图<i>S。selaginoides< / i> & lt; i> S。helvetica< / i>和& lt; i> S。apoda< / i>介绍了该物种在波兰的分布及鉴定关键。
{"title":"The genus &lt;i&gt;Selaginella&lt;/i&gt; P. BEAUV. (Selaginellaceae, Lycopodiopsida) in Poland: The occurrence of three species as a result of the historical material verification","authors":"Ewa Szczęśniak, Edyta M. Gola, Wojciech J. Szypuła","doi":"10.5586/asbp/171688","DOIUrl":"https://doi.org/10.5586/asbp/171688","url":null,"abstract":"Two species of the <i>Selaginella</i> genus were noted in Poland up to date, i.e. <i>S. selaginoides</i> and <i>S. helvetica</i>. The first species occurs in the Western Carpathians and the Western Sudetes, however, its Sudeten sites were less numerous than previously reported. The second species was one of the rarest elements in Polish flora. Two populations were reported in Silesia (SW Poland), but after 1945 the species was not confirmed in the nature and thus currently it is regarded in Poland as extinct. Its occurrence and locations were given in the literature based on the historical sources, yet without revision of herbarium materials. Our research on <i>Selaginella</i> vouchers, collected from the sites in Silesia and primarily identified as <i>S. helvetica</i>, showed that only one population represented <i>S. helvetica</i>, whereas the second one was identified by us as an alien American species, <i>S. apoda</i>. This is the first record of S. apoda occurrence in Poland out of cultivation, and the second in Europe. Accordingly, corrected maps of <i>S. selaginoides</i>, <i>S. helvetica</i> and <i>S. apoda</i> distribution in Poland together with the identification key to the species are presented.","PeriodicalId":7157,"journal":{"name":"Acta Societatis Botanicorum Poloniae","volume":"239 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136098132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Homogenization and species compositional shifts in subalpine vegetation during the 60-year period 近60年亚高山植被均一化与物种组成变化
4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-10-04 DOI: 10.5586/asbp/171689
Miroslav Zeidler, Václav Husek, Marek Banaš, František Krahulec
Subalpine and alpine plant communities are considered highly sensitive and hence endangered by global changes. In central Europe, the highly sensitive habitats are also influenced by human activities: land use, industrial pollution, and tourism. That is especially true for subalpine plant communities formed on mid-latitude mountains during specific postglacial development. Our study aimed to (1) document changes in cover and plant species diversity between the past (1950s and 1970s) and present (2019) and (2) reveal differences in the functional composition of the species among the studied periods. In 2019, quasi-permanent marked plots originally surveyed in the 1950s and 1970s were resurveyed at Králický Sněžník (Śnieżnik Kłodski) Mountains, the High Sudetes Mts.. We assessed temporal changes in plant species composition, species cover, functional groups, growth forms, and degree of specialization. We found homogenization of the vegetation over time and changes in the cover of specific functional groups that were attributed to environmental factors connected with the cessation of historical land use, atmospheric deposition, and climate change. Implementing a suitable combination of mowing and grazing to support diversity, and to prevent homogenization of vegetation is highly recommended.
亚高山和高山植物群落被认为是高度敏感的,因此受到全球变化的威胁。在中欧,高度敏感的栖息地也受到人类活动的影响:土地利用、工业污染和旅游业。对于在特定的冰川后发育期间在中纬度山脉上形成的亚高山植物群落来说,情况尤其如此。我们的研究旨在(1)记录过去(20世纪50年代至70年代)和现在(2019年)的植被覆盖和植物物种多样性的变化;(2)揭示不同研究时期物种功能组成的差异。2019年,在Králický Sněžník (Śnieżnik Kłodski) Mountains, High sudees Mts..我们评估了植物物种组成、物种覆盖、功能类群、生长形式和专业化程度的时间变化。我们发现,随着时间的推移,植被的同质化和特定功能群的覆盖变化归因于与历史土地利用停止、大气沉积和气候变化相关的环境因素。强烈建议实施适当的割草和放牧组合,以支持多样性,并防止植被同质化。
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引用次数: 0
Aerobiology in Poland: Achievements and challenges 波兰的空气生物学:成就与挑战
4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-09-29 DOI: 10.5586/asbp/172278
Łukasz Grewling, Dorota Myszkowska, Krystyna Piotrowska-Weryszko, Aneta Sulborska-Różycka, Elżbieta Weryszko-Chmielewska
Aerobiology is a scientific discipline that focuses on investigating biological particles (bioaerosols) passively transported in the atmosphere, mainly fungal spores and pollen grains. Due to the allergic and pathogenic properties of these particles, aerobiological data is widely used in allergology, plant pathology, and agriculture. In addition, the results of aerobiological monitoring have found applications in biogeography, paleoecology, forestry, veterinary medicine, forensic science, and climate change research, as well as in the assessment of threats to the deterioration of cultural heritage. In this review, the contribution of Polish scientists to the development of worldwide aerobiology is presented. The most important results on the atmospheric dispersion of bioaerosols, spatiotemporal modeling, and novel methods used in aerobiological research are described. Moreover, the cooperation at the national and international levels as part of scientific programs and the perspectives for further development of aerobiology in Poland are discussed.
空气生物学是研究被动在大气中传播的生物微粒(生物气溶胶)的一门科学学科,主要是真菌孢子和花粉粒。由于这些颗粒的过敏和致病特性,空气生物学数据被广泛应用于过敏症学、植物病理学和农业。此外,大气生物监测结果在生物地理学、古生态学、林业、兽医学、法医学、气候变化研究以及文化遗产退化威胁评估等领域均有应用。本文综述了波兰科学家对世界空气生物学发展的贡献。介绍了生物气溶胶在大气中的扩散、时空模拟以及在大气生物学研究中使用的新方法。此外,还讨论了作为科学计划的一部分的国家和国际层面的合作以及波兰空气生物学进一步发展的前景。
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引用次数: 0
Plants for saving the environment- Phytoremediation 拯救环境的植物。植物修复
4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-09-25 DOI: 10.5586/asbp/171278
Gawroński Stanisław
A large part of the civilizational progress has been achieved at the expense of the natural environment, which recently reached the stages that threaten its creator. Plants play an important role in various areas of our lives, and it turned out that we can rely on them to reduce this threat. The ability of living organisms and the systems they create to protect and restore the environment is at the core of a technology called environmental biotechnology. Advances in science and technology have created a plant-based discipline known as phytoremediation. This technology allows us to remove or reduce the level of pollutants in our surroundings. We can phytoextract heavy metals from contaminated soil and water with the help of resistant plant species and recover noble metals and rare elements. When the soil or water is contaminated with organic compounds, we try to eliminate them completely with the help of plants and their microbiome. Phytoextraction from water is related to the accumulation of pollutants in water and sediments, in which macrophytes from all water groups participate, including free-floating submerged and emerged plants. The task of these plants, apart from the accumulation of metals or organic toxins, is also the uptake of phosphorus and nitrogen to prevent the eutrophication of water. In recent years, the quality of air has deteriorated. Nowadays, 90% of the population breathes air that does not meet WHO standards. It should be emphasized that in the case of outdoor air, there is no industrial system for removing pollutants. In fact, we can only count on nature: rainfall and plants. Indoor air is sometimes even more polluted than outside and, therefore, we should be safe in it with the help of plants that are able to create a refuge. Additionally, it fulfills biofilling desires and improves our mood.
文明进步的很大一部分是以牺牲自然环境为代价的,而自然环境最近已经到了威胁其创造者的地步。植物在我们生活的各个方面都扮演着重要的角色,事实证明,我们可以依靠它们来减少这种威胁。生物及其创造的系统保护和恢复环境的能力是一种被称为环境生物技术的技术的核心。科学技术的进步创造了一门以植物为基础的学科,即植物修复。这项技术使我们能够消除或降低我们周围环境中的污染物水平。我们可以借助抗性植物从污染的土壤和水中提取重金属,回收贵金属和稀有元素。当土壤或水被有机化合物污染时,我们试图在植物和它们的微生物群的帮助下完全消除它们。植物从水中提取与污染物在水中和沉积物中的积累有关,所有水系的大型植物都参与其中,包括自由漂浮的水下植物和浮出水面的植物。这些植物的任务,除了积累金属或有机毒素,也是磷和氮的吸收,以防止水体富营养化。近年来,空气质量恶化了。如今,90%的人口呼吸着不符合世卫组织标准的空气。应该强调的是,在室外空气的情况下,没有去除污染物的工业系统。事实上,我们只能依靠自然:降雨和植物。室内空气有时甚至比室外污染更严重,因此,在植物的帮助下,我们在室内应该是安全的,因为植物能够创造一个避难所。此外,它满足了生物填充的欲望,改善了我们的情绪。
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引用次数: 0
Nanopore sequencing of organellar genomes revealed heteroplasmy in simple thalloid and leafy liverworts 细胞器基因组的纳米孔测序揭示了简单菌体和叶苔的异质性
4区 生物学 Q3 PLANT SCIENCES Pub Date : 2023-09-19 DOI: 10.5586/asbp/172516
Jakub Sawicki, Katarzyna Krawczyk, Mateusz Kurzyński, Mateusz Maździarz, Łukasz Paukszto, Paweł Sulima, Monika Szczecińska
Membrane-bound organelles, such as mitochondria and chloroplasts, have played a crucial role in the evolution of plant cells. In this study, we investigate the presence of heteroplasmy and genomic variation in liverworts, a group of non-vascular plants, using nanopore sequencing technology. We selected four liverwort species representing different lineages: Riccia fluitans, Apopellia endiviifolia, Aneura pinguis, and Scapania undulata. Through nanopore sequencing, we sequenced, assembled, and annotated the organellar genomes of selected liverwort species. The plastid genomes of Riccia fluitans, Apopellia endiviifolia, Aneura pinguis, and Scapania undulata exhibited high conservation with previously published genomes, while the mitogenome of Scapania undulata represents the first report for this species. The analysis of the liverwort organellar genomes revealed conserved gene content, structure, and order. We further investigated heteroplasmy within the liverwort species. The plastome analysis did not detect structural heteroplasmy, which is observed in some angiosperms but seems limited to seed plants. However, in the mitogenomes, we found evidence of heteroplasmy in Aneura pinguis, Apopellia endiviifolia, and Scapania undulata. The heteroplasmic sites in the mitogenomes were mainly represented by substitutions, indels, and short tandem repeat polymorphisms. Some of the identified substitutions resembled RNA editing patterns observed in liverworts. This study highlights the utility of nanopore sequencing for studying organellar genomes and detecting heteroplasmy in liverworts. The findings expand our understanding of organellar genomic variation in non-vascular plants and provide insights into the mechanisms underlying heteroplasmy in liverwort mitogenomes. Further research is needed to explore the functional significance of heteroplasmy and its implications for liverwort evolution and adaptation.
膜结合细胞器,如线粒体和叶绿体,在植物细胞的进化中起着至关重要的作用。在这项研究中,我们利用纳米孔测序技术研究了肝草(一组无维管植物)中异质性和基因组变异的存在。我们选取了代表不同谱系的4种苔属植物:<i>Riccia fluitans</i> <i>Apopellia endiviiolia< <i>; angela pinguis</i>;通过纳米孔测序,我们对选定的苔类植物的细胞器基因组进行了测序、组装和注释。Riccia fluitans</i>;Apopellia endiviiolia<; <i>; anopellia pinguis<;和<i>Scapania波动<;与先前发表的基因组表现出高度的保守性,而波状Scapania波状Scapania波状Scapania的有丝分裂基因组</i>这是该物种的首次报道。对肝草细胞器基因组的分析揭示了保守的基因含量、结构和顺序。我们进一步研究了苔类的异质性。质体分析没有发现结构异质性,这在一些被子植物中观察到,但似乎仅限于种子植物。然而,在有丝分裂基因组中,我们发现了异质性的证据,包括<i>动脉瘤</i>、<i>Apopellia endiviifolia</i>和<i>山葵</i>。有丝分裂基因组的异质位点主要表现为取代、索引和短串联重复多态性。一些鉴定的替换类似于在肝植物中观察到的RNA编辑模式。本研究强调了纳米孔测序在研究肝植物细胞器基因组和检测异质性方面的应用。这些发现扩大了我们对非维管植物细胞器基因组变异的理解,并为肝植物有丝分裂基因组异质性的机制提供了见解。异质性的功能意义及其在苔类进化和适应中的意义有待进一步研究。
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引用次数: 0
期刊
Acta Societatis Botanicorum Poloniae
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