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Recent advances in the application of induced pluripotent stem cell technology to the study of myeloid malignancies 诱导多能干细胞技术在髓系恶性肿瘤研究中的应用进展。
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2023.100993
Dharamveer Tatwavedi, Andrea Pellagatti, Jacqueline Boultwood

Acquired myeloid malignancies are a spectrum of clonal disorders known to be caused by sequential acquisition of genetic lesions in hematopoietic stem and progenitor cells, leading to their aberrant self-renewal and differentiation. The increasing use of induced pluripotent stem cell (iPSC) technology to study myeloid malignancies has helped usher a paradigm shift in approaches to disease modeling and drug discovery, especially when combined with gene-editing technology. The process of reprogramming allows for the capture of the diversity of genetic lesions and mutational burden found in primary patient samples into individual stable iPSC lines. Patient-derived iPSC lines, owing to their self-renewal and differentiation capacity, can thus be a homogenous source of disease relevant material that allow for the study of disease pathogenesis using various functional read-outs. Furthermore, genome editing technologies like CRISPR/Cas9 enable the study of the stepwise progression from normal to malignant hematopoiesis through the introduction of specific driver mutations, individually or in combination, to create isogenic lines for comparison. In this review, we survey the current use of iPSCs to model acquired myeloid malignancies including myelodysplastic syndromes (MDS), myeloproliferative neoplasms (MPN), acute myeloid leukemia and MDS/MPN overlap syndromes. The use of iPSCs has enabled the interrogation of the underlying mechanism of initiation and progression driving these diseases. It has also made drug testing, repurposing, and the discovery of novel therapies for these diseases possible in a high throughput setting.

获得性骨髓恶性肿瘤是一系列克隆性疾病,已知是由造血干细胞和祖细胞的遗传损伤顺序获得引起的,导致其异常的自我更新和分化。诱导多能干细胞(iPSC)技术在研究髓系恶性肿瘤中的应用越来越多,这有助于引导疾病建模和药物发现方法的范式转变,尤其是与基因编辑技术相结合时。重新编程的过程允许将在原始患者样本中发现的遗传损伤和突变负担的多样性捕获到个体稳定的iPSC系中。患者来源的iPSC系,由于其自我更新和分化能力,因此可以成为疾病相关材料的同质来源,从而允许使用各种功能读数来研究疾病发病机制。此外,CRISPR/Cas9等基因组编辑技术能够通过单独或组合引入特定的驱动突变来研究从正常到恶性造血的逐步进展,以创建用于比较的等基因系。在这篇综述中,我们综述了目前iPSC用于建立获得性骨髓恶性肿瘤模型的应用,包括骨髓增生异常综合征(MDS)、骨髓增生性肿瘤(MPN)、急性髓系白血病和MDS/MPN重叠综合征。iPSC的使用使人们能够探究驱动这些疾病的发生和发展的潜在机制。它还使药物测试、重新利用和发现治疗这些疾病的新疗法成为可能。
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引用次数: 0
Ablation of diacylglycerol kinase ε promotes whitening of brown adipose tissue under high fat diet feeding 二酰基甘油激酶ε的消蚀促进高脂日粮喂养下棕色脂肪组织的增白。
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2023.100994
Tomoyuki Nakano, Ayako Suzuki, Kaoru Goto

Adipose tissue (AT) comprises distinct fat depots such as white AT and brown AT. White and brown adipocytes exhibit different morphological and physiological properties. White adipocytes containing large single lipid droplet (LD) provide energy on demand whereas brown adipocytes loaded with multilocular LDs consume energy to generate heat or dissipate excess energy. Recent studies have shown that multilocular brown-like cells emerge in white AT under certain conditions. These cells termed beige adipocytes participate in energy expenditure and heat generation. In the process of lipolysis, TG is broken down into free fatty acid and diacylglycerol (DG). In this regard, DG also serves as a signaling molecule activating some proteins such as protein kinase C. Therefore, DG kinase (DGK), an enzyme which phosphorylates DG into phosphatidic acid (PA), plays a pivotal role in integrating energy homeostasis and intracellular signaling. Recently, we described that DGKε-KO mice exhibit increased adiposity in visceral white AT accompanied with impaired glucose tolerance early (40 days) in the course of high fat diet (HFD) feeding, although these mice exhibit “browning or beiging” in visceral white AT associated with improved glucose tolerance after longer term HFD feeding (180 days). This study was conducted to understand the overall features of adipose tissues and investigate changes in subcutaneous (inguinal) white AT and interscapular brown AT of DGKε-KO mice during the course of HFD feeding. Results demonstrated that fat accumulation is promoted in all fat depots under 40 days of HFD feeding conditions. Remarkably, “whitening” of brown adipocytes was identified in DGKε-deficient brown AT during the course of HFD feeding, suggesting brown adipocyte dysfunction. In addition, insulin levels were considerably elevated in DGKε-KO mice under 180 days of HFD feeding conditions. Collectively, these findings suggest that brown adipocytes are dysfunctional in DGKε-KO mice, which promotes browning or beiging in visceral white AT. Beige adipocytes may take over energy disposal and contribute to improving glucose tolerance with the aid of high levels of insulin in DGKε-KO mice upon excess feeding.

脂肪组织(AT)包括不同的脂肪库,如白色AT和棕色AT。白色和棕色脂肪细胞表现出不同的形态和生理特性。含有大的单个脂滴(LD)的白色脂肪细胞根据需要提供能量,而载有多房LD的棕色脂肪细胞消耗能量来产生热量或耗散多余的能量。最近的研究表明,在某些条件下,白色AT中会出现多房棕色样细胞。这些被称为米色脂肪细胞的细胞参与能量消耗和热量产生。在脂肪分解过程中,TG被分解为游离脂肪酸和二酰甘油(DG)。在这方面,DG还充当激活一些蛋白质(如蛋白激酶C)的信号分子。因此,DG激酶(DGK),一种将DG磷酸化为磷脂酸(PA)的酶,在整合能量稳态和细胞内信号传导方面发挥着关键作用。最近,我们描述了DGKε-KO小鼠在高脂饮食(HFD)喂养的早期(40天)内脏白色AT中表现出肥胖增加,并伴有糖耐量受损,尽管这些小鼠在长期HFD喂养(180天)后内脏白色AT表现出与糖耐量改善相关的“褐变或beiging”。本研究旨在了解DGKε-KO小鼠脂肪组织的整体特征,并研究在HFD喂养过程中皮下(腹股沟)白色AT和肩胛间棕色AT的变化。结果表明,在HFD饲养40天的条件下,所有脂肪库中的脂肪积累都得到了促进。值得注意的是,在HFD喂养过程中,在DGKε缺乏的棕色AT中发现了棕色脂肪细胞的“白化”,这表明棕色脂肪细胞功能障碍。此外,在180天的HFD喂养条件下,DGKε-KO小鼠的胰岛素水平显著升高。总之,这些发现表明,DGKε-KO小鼠的棕色脂肪细胞功能失调,这会促进内脏白色AT的褐变或褐化。褐化脂肪细胞可能会接管能量处理,并有助于改善DGKε-KO小鼠在过量喂养时的高水平胰岛素,从而改善葡萄糖耐量。
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引用次数: 0
Diacylglycerol kinases: A look into the future of immunotherapy 二酰甘油激酶:免疫疗法的未来展望。
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2023.100999
Miguel Martin-Salgado, Ane Ochoa-Echeverría, Isabel Mérida

Cancer still represents the second leading cause of death right after cardiovascular diseases. According to the World Health Organization (WHO), cancer provoked around 10 million deaths in 2020, with lung and colon tumors accounting for the deadliest forms of cancer. As tumor cells become resistant to traditional therapeutic approaches, immunotherapy has emerged as a novel strategy for tumor control. T lymphocytes are key players in immune responses against tumors. Immunosurveillance allows identification, targeting and later killing of cancerous cells. Nevertheless, tumors evolve through different strategies to evade the immune response and spread in a process called metastasis. The ineffectiveness of traditional strategies to control tumor growth and expansion has led to novel approaches considering modulation of T cell activation and effector functions. Program death receptor 1 (PD-1) and cytotoxic T-lymphocyte antigen 4 (CTLA-4) showed promising results in the early 90s and nowadays are still being exploited together with other drugs for several cancer types. Other negative regulators of T cell activation are diacylglycerol kinases (DGKs) a family of enzymes that catalyze the conversion of diacylglycerol (DAG) into phosphatidic acid (PA). In T cells, DGKα and DGKζ limit the PLCγ/Ras/ERK axis thus attenuating DAG mediated signaling and T cell effector functions. Upregulation of either of both isoforms results in impaired Ras activation and anergy induction, whereas germline knockdown mice showed enhanced antitumor properties and more effective immune responses against pathogens. Here we review the mechanisms used by DGKs to ameliorate T cell activation and how inhibition could be used to reinvigorate T cell functions in cancer context. A better knowledge of the molecular mechanisms involved upon T cell activation will help to improve current therapies with DAG promoting agents.

癌症仍然是仅次于心血管疾病的第二大死亡原因。根据世界卫生组织(世界卫生组织)的数据,癌症在2020年导致约1000万人死亡,其中肺部和结肠癌是癌症最致命的形式。随着肿瘤细胞对传统治疗方法产生耐药性,免疫疗法已成为一种新的肿瘤控制策略。T淋巴细胞是对抗肿瘤免疫反应的关键因素。免疫监测可以识别、靶向并随后杀死癌细胞。然而,肿瘤通过不同的策略来逃避免疫反应,并在一个称为转移的过程中扩散。控制肿瘤生长和扩展的传统策略无效,导致了考虑调节T细胞激活和效应器功能的新方法。程序性死亡受体1(PD-1)和细胞毒性T淋巴细胞抗原4(CTLA-4)在90年代初显示出有希望的结果,目前仍在与其他药物一起开发用于几种癌症类型。T细胞活化的其他负调控因子是二酰甘油激酶(DGKs),这是一个催化二酰甘油(DAG)转化为磷脂酸(PA)的酶家族。在T细胞中,DGKα和DGKζ限制了PLCγ/Ras/ERK轴,从而减弱了DAG介导的信号传导和T细胞效应器功能。两种亚型中任一种的上调都会导致Ras激活受损和无反应诱导,而种系敲低小鼠表现出增强的抗肿瘤特性和对病原体更有效的免疫反应。在此,我们回顾了DGKs用于改善T细胞活化的机制,以及在癌症背景下如何使用抑制来重振T细胞功能。更好地了解T细胞活化的分子机制将有助于改进目前使用DAG促进剂的治疗方法。
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引用次数: 0
Key to photograph of participants 与会者照片的关键信息。
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2024.101020
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引用次数: 0
Notch-3 affects chemoresistance in colorectal cancer via DNA base excision repair enzymes Notch-3 通过 DNA 碱基切除修复酶影响结直肠癌的化疗耐药性
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2024.101013
Dennis C. George , Fred E. Bertrand , George Sigounas

Colon cancer is the second leading cause of cancer death. With over 153,000 new CRC cases predicted, it is the third most commonly diagnosed cancer. Early detection can lead to curative surgical intervention, but recurrent and late metastatic disease is frequently treated with chemotherapeutic options based on induction of DNA damage. Understanding mechanism(s) that regulate DNA damage repair within colon tumor cells is essential to developing effective therapeutic strategies. The Notch signaling pathway is known to participate in normal colon development and we have recently described a pathway by which Notch-1, Notch-3 and Smad may regulated EMT and stem-like properties in colon tumor cells, promoting tumorigenesis. Little is known about how Notch may regulate drug resistance. In this study, we used shRNA to generate colon tumor cells with loss of Notch-3 expression. These cells exhibited reduced expression of the base-excision repair proteins PARP1 and APE1, along with increased sensitivity to ara-c and cisplatin. These data point to a pathway in which Notch-3 signaling can regulate DNA repair within colon tumor cells and suggests that targeting Notch-3 may be an effective approach to rendering colon tumors sensitive to chemotherapeutic drugs.

结肠癌是导致癌症死亡的第二大原因。据预测,结肠癌新增病例超过 15.3 万例,是第三大最常诊断出的癌症。早期发现可导致治愈性手术干预,但复发和晚期转移性疾病通常采用基于 DNA 损伤诱导的化疗方案。了解结肠肿瘤细胞内 DNA 损伤修复的调控机制对于制定有效的治疗策略至关重要。众所周知,Notch 信号通路参与结肠的正常发育,我们最近描述了一种通路,通过这种通路,Notch-1、Notch-3 和 Smad 可调控结肠肿瘤细胞的 EMT 和干样特性,从而促进肿瘤发生。人们对 Notch 如何调控耐药性知之甚少。在这项研究中,我们使用 shRNA 生成了 Notch-3 表达缺失的结肠肿瘤细胞。这些细胞表现出碱基切除修复蛋白 PARP1 和 APE1 的表达减少,同时对 ara-c 和顺铂的敏感性增加。这些数据表明,Notch-3 信号通路可以调节结肠肿瘤细胞内的 DNA 修复,并表明以 Notch-3 为靶点可能是使结肠肿瘤对化疗药物敏感的有效方法。
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引用次数: 0
Yusuf hannun photo 优素福-哈农照片。
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2024.101021
Lucio Ildebrando cocco
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引用次数: 0
The wide world of non-mammalian phospholipase D enzymes 非哺乳动物磷脂酶 D 的广阔天地
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2023.101000
Y. Wang , M.J.O. Wakelam , V.A. Bankaitis , M.I. McDermott

Phospholipase D (PLD) hydrolyses phosphatidylcholine (PtdCho) to produce free choline and the critically important lipid signaling molecule phosphatidic acid (PtdOH). Since the initial discovery of PLD activities in plants and bacteria, PLDs have been identified in a diverse range of organisms spanning the taxa. While widespread interest in these proteins grew following the discovery of mammalian isoforms, research into the PLDs of non-mammalian organisms has revealed a fascinating array of functions ranging from roles in microbial pathogenesis, to the stress responses of plants and the developmental patterning of flies. Furthermore, studies in non-mammalian model systems have aided our understanding of the entire PLD superfamily, with translational relevance to human biology and health. Increasingly, the promise for utilization of non-mammalian PLDs in biotechnology is also being recognized, with widespread potential applications ranging from roles in lipid synthesis, to their exploitation for agricultural and pharmaceutical applications.

磷脂酶 D(PLD)水解磷脂酰胆碱(PtdCho),产生游离胆碱和极其重要的脂质信号分子磷脂酸(PtdOH)。自最初在植物和细菌中发现 PLD 活性以来,PLDs 已在不同类群的生物体中被发现。在发现哺乳动物的同工型蛋白后,人们对这些蛋白的兴趣日益浓厚,而对非哺乳动物的 PLDs 的研究则揭示了一系列引人入胜的功能,包括在微生物致病过程中的作用、植物的应激反应以及苍蝇的发育模式。此外,对非哺乳动物模型系统的研究有助于我们了解整个 PLD 超家族,并将其转化为人类生物学和健康的相关性。非哺乳动物 PLDs 在生物技术中的应用前景也日益得到认可,其潜在应用范围广泛,包括在脂质合成中的作用,以及在农业和制药中的应用。
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引用次数: 0
Sixty-fourth international symposium on biological regulation and enzyme activity in normal and neoplastic tissues 第六十四届正常组织和肿瘤组织中的生物调节和酶活性国际研讨会:与会者名单。
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2024.101017
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引用次数: 0
The role and regulation of phospholipase D in metabolic disorders 磷脂酶D在代谢紊乱中的作用和调节。
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2023.100988
Seon Hyang Park , Ji Hyeon Kang , Yoe-Sik Bae

Phospholipase D (PLD) is an enzyme that catalyzes the hydrolysis of phosphatidylcholine into phosphatidic acid and free choline. In mammals, PLD exists in two well-characterized isoforms, PLD1 and PLD2, and it plays pivotal roles as signaling mediators in various cellular functions, such as cell survival, differentiation, and migration. These isoforms are predominantly expressed in diverse cell types, including many immune cells, such as monocytes and macrophages, as well as non-immune cells, such as epithelial and endothelial cells. Several previous studies have revealed that the stimulation of these cells leads to an increase in PLD expression and its enzymatic products, potentially influencing the pathological responses in a wide spectrum of diseases. Metabolic diseases, exemplified by conditions, such as diabetes, obesity, hypertension, and atherosclerosis, pose significant global health challenges. Abnormal activation or dysfunction of PLD emerges as a potential contributing factor to the pathogenesis and progression of these metabolic disorders. Therefore, it is crucial to thoroughly investigate and understand the intricate relationship between PLD and metabolic diseases. In this review, we provide an in-depth overview of the functional roles and molecular mechanisms of PLD involved in metabolic diseases. By delving into the intricate interplay between PLD and metabolic disorders, this review aims to offer insights into the potential therapeutic interventions.

磷脂酶D(PLD)是一种催化磷脂酰胆碱水解为磷脂酸和游离胆碱的酶。在哺乳动物中,PLD存在于两种表征良好的亚型中,PLD1和PLD2,它在各种细胞功能中发挥着关键的信号介质作用,如细胞存活、分化和迁移。这些亚型主要在不同的细胞类型中表达,包括许多免疫细胞,如单核细胞和巨噬细胞,以及非免疫细胞,例如上皮细胞和内皮细胞。先前的几项研究表明,刺激这些细胞会导致PLD表达及其酶产物的增加,从而可能影响广泛疾病的病理反应。代谢性疾病,例如糖尿病、肥胖症、高血压和动脉粥样硬化,对全球健康构成了重大挑战。PLD的异常激活或功能障碍是这些代谢紊乱的发病机制和进展的潜在因素。因此,深入研究和理解PLD与代谢性疾病之间的复杂关系至关重要。在这篇综述中,我们对PLD在代谢性疾病中的功能作用和分子机制进行了深入的综述。通过深入研究PLD和代谢紊乱之间复杂的相互作用,这篇综述旨在为潜在的治疗干预措施提供见解。
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引用次数: 0
Flimsy overlay 薄薄的覆盖层。
Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1016/j.jbior.2024.101019
Lucio Ildebrando cocco
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引用次数: 0
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Advances in biological regulation
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