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Granzyme B-producing B cells: a bidirectional relationship with breast cancer cells and implications for immunotherapy. 产生颗粒酶B的B细胞:与乳腺癌细胞的双向关系及其对免疫治疗的影响。
IF 1.3 Q4 IMMUNOLOGY Pub Date : 2025-10-25 eCollection Date: 2025-01-01 DOI: 10.62347/ANSN3150
Hosein Hakimi, Fereshteh Mehdipour, Morteza Samadi, Sima Balouchi Anaraki, Reza Rasolmali, Abdol-Rasoul Talei, Abbas Ghaderi

Granzyme B (GrB)-producing B cells have dual roles in tumor immunity, either killing tumor cells or suppressing antitumor responses by eliminating effector T cells. In this study, we aimed to investigate how breast cancer cells influence GrB-producing B cells from tumor-draining lymph nodes and whether B cell activation enhances their cytotoxic potential. Mononuclear cells were isolated from 14 fresh axillary lymph node samples by density gradient centrifugation using Ficoll-Hypaque. Lymphocytes were co-cultured with breast tumor cell lines (MCF-7 and MDA-231) in the presence of recombinant interleukin-21 (rIL-21) and anti-B cell receptor (BCR). B cell granzyme B production was measured by flow cytometry, while tumor cell (MCF-7) apoptosis was assessed using calcein AM release assays. Direct co-culture of lymphocytes with MCF-7 or MDA-MB-231 significantly reduced the frequency of GrB-producing B cells (P=0.001 and P=0.031, respectively), while tumor supernatants alone had no effect. When B cells were pre-stimulated with IL-21 and anti-BCR for 24 hours before direct co-culture, GrB expression was maintained at baseline levels (no significant difference vs. control). Additionally, B cells activated with IL-21 and anti-BCR caused significant apoptosis in MCF-7 cells (38±8.9%, P=0.023). In conclusion, breast cancer cells suppress GrB+ B cell responses via direct contact, but this suppression is reversible through B cell activation. Importantly, pre-activated B cells exhibit direct cytotoxic activity against tumor cells, highlighting their potential as an effector population for breast cancer immunotherapy.

产生颗粒酶B (GrB)的B细胞在肿瘤免疫中具有双重作用,要么杀死肿瘤细胞,要么通过消除效应T细胞抑制抗肿瘤反应。在这项研究中,我们旨在研究乳腺癌细胞如何影响肿瘤引流淋巴结中产生grb的B细胞,以及B细胞激活是否增强了它们的细胞毒性潜能。采用Ficoll-Hypaque密度梯度离心法从14份新鲜腋窝淋巴结标本中分离单个核细胞。在重组白细胞介素-21 (il -21)和抗b细胞受体(BCR)存在下,淋巴细胞与乳腺肿瘤细胞系MCF-7和MDA-231共培养。用流式细胞术检测B细胞颗粒酶B的产生,用钙黄蛋白AM释放法检测肿瘤细胞(MCF-7)的凋亡。淋巴细胞与MCF-7或MDA-MB-231直接共培养可显著降低产生grb的B细胞的频率(P=0.001和P=0.031),而单独使用肿瘤上清液则没有影响。在直接共培养前用IL-21和抗bcr预刺激B细胞24小时,GrB表达维持在基线水平(与对照组无显著差异)。此外,IL-21和抗bcr激活的B细胞导致MCF-7细胞显著凋亡(38±8.9%,P=0.023)。总之,乳腺癌细胞通过直接接触抑制GrB+ B细胞的反应,但这种抑制通过B细胞激活是可逆的。重要的是,预活化的B细胞对肿瘤细胞表现出直接的细胞毒性活性,突出了它们作为乳腺癌免疫治疗效应群的潜力。
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引用次数: 0
Cell-free DNA fragmentomics as a non-invasive tool for predicting pathologic response in colorectal cancer. 无细胞DNA片段组学作为预测结直肠癌病理反应的非侵入性工具。
IF 1.3 Q4 IMMUNOLOGY Pub Date : 2025-10-25 eCollection Date: 2025-01-01 DOI: 10.62347/YSQL3793
Wenshi Hu, Guoyan Li, Wanyu Dong, Yaojuan Lu, Zhou Li, Qiping Zheng

Despite advances in screening and therapy, colorectal cancer (CRC) remains a leading cause of cancer-related mortality worldwide, underscoring the need for early detection and for predicting treatment efficacy. This review highlights circulating cell-free DNA (cfDNA) fragmentomics as a promising non-invasive approach for tumor detection and disease monitoring. We focus on fragmentomic features - such as fragment size distributions, fragment-end motifs, and epigenetic signals - which, when integrated into machine-learning models, have shown strong performance in distinguishing patients with CRC from healthy controls. Emerging evidence indicates that, these signatures may support early-stage detection, track disease progression, and predict pathologic complete response (pCR), thereby enabling more personalized treatment strategies. We also discuss the potential role of fragmentomics in non-operative management, including "watch-and-wait" approaches. However, important gaps remain in clinical translation; prospective trials and standardized assays/analysis pipelines are required to validate these findings and define their real-world utility.

尽管在筛查和治疗方面取得了进展,但结直肠癌(CRC)仍然是全球癌症相关死亡的主要原因,这强调了早期发现和预测治疗效果的必要性。这篇综述强调了循环无细胞DNA (cfDNA)片段组学作为一种有前途的非侵入性肿瘤检测和疾病监测方法。我们专注于片段组学特征——如片段大小分布、片段末端基序和表观遗传信号——当整合到机器学习模型中时,它们在区分CRC患者和健康对照方面表现出了很强的性能。新出现的证据表明,这些特征可以支持早期检测,跟踪疾病进展,预测病理完全反应(pCR),从而实现更个性化的治疗策略。我们还讨论了片段组学在非手术治疗中的潜在作用,包括“观察和等待”方法。然而,重要的差距仍然存在于临床翻译;需要前瞻性试验和标准化分析/分析管道来验证这些发现并定义其实际效用。
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引用次数: 0
Cyclophosphamide modulates Wnt3a/β-catenin signaling in MRL/lpr mice with lupus nephritis. 环磷酰胺调节MRL/lpr狼疮性肾炎小鼠Wnt3a/β-catenin信号通路
IF 1.3 Q4 IMMUNOLOGY Pub Date : 2025-10-25 eCollection Date: 2025-01-01 DOI: 10.62347/FVAQ6809
Shuhong Zhou, Liuna Liang, Kai Zhang, Minghao Wang, Yan Wang, Hao Xu, Jing Zhou, Ying Chen, Wangzheqi Zhang, Haoling Zhang, Xiaowei Sun

This study was carried out to analyze the time-dependent changes of Wnt3a/β-catenin signaling during lupus nephritis (LN). At the age of 5 weeks, 30 female MRL/lpr mice and C57BL/6 (C57) mice were randomly grouped. Moreover, 12 females MRL/lpr mice were split into two groups, cyclophosphamide treatment (LN-CTX) and one was untreated. Mice in the LN-CTX group were injected intraperitoneally with cyclophosphamide (CTX) from the age of 16 wk. Urinary protein, serum antinuclear antibodies (ANA), and anti-double-stranded DNA (dsDNA) antibody levels were measured. The detection of renal injury was later confirmed through histopathology, and immunofluorescence analysis. Compared with C57 mice, LN mice had much higher levels of 24-hour urinary protein, ANA and dsDNA antibodies (P<0.05). Histological examination exhibited the proliferation of mesangial cells with the invasion of inflammatory cells, while deposition of immune complex was shown to reach the peak at 28 weeks. The production of Wnt3a and β-catenin proteins and mRNA was significantly increased in the kidneys of LN mice. In contrast, 24-hour urinary protein, ANA and dsDNA antibodies levels decreased significantly and CTX treatment caused a drop in the aforementioned immune response (P<0.05). Renal histopathological changes and immune complex deposition were ameliorated by CTX treatment. the renal levels. Notably, the renal levels of Wnt3a/β-catenin at LN-CTX were found to be lower than that in the untreated LN group. The abnormal activation of the Wnt/β-catenin signaling pathway may play a role in LN formation and thus important molecular target for CTX drug. This research shows that CTX inhibits renal Wnt3a/β-catenin activation in LN mice for the first time, offering a potential molecular mechanism for its renoprotective effects.

本研究旨在分析Wnt3a/β-catenin信号在狼疮性肾炎(LN)期间的时间依赖性变化。5周龄时,将30只雌性MRL/lpr小鼠和C57BL/6 (C57)小鼠随机分组。将12只雌性MRL/lpr小鼠分为两组,一组为环磷酰胺治疗组(LN-CTX),另一组为未治疗组。LN-CTX组小鼠从16周龄开始腹腔注射环磷酰胺(CTX)。检测尿蛋白、血清抗核抗体(ANA)、抗双链DNA (dsDNA)抗体水平。随后通过组织病理学和免疫荧光分析证实肾损伤的检测。与C57小鼠相比,LN小鼠24小时尿蛋白、ANA和dsDNA抗体水平明显高于C57小鼠(P
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引用次数: 0
Synergic effect of combined melatonin and tofacitinib on ameliorating dextran sulfate sodium-induced colitis in rat---role of JAKs/STAT, cell-stress signaling, and inflammatory-immune reaction. 褪黑素联合托法替尼对大鼠葡聚糖硫酸钠诱导的结肠炎的协同作用——JAKs/STAT、细胞应激信号和炎症免疫反应的作用
IF 1.3 Q4 IMMUNOLOGY Pub Date : 2025-08-15 eCollection Date: 2025-01-01 DOI: 10.62347/FXYY2658
Chia-Lo Chang, Chih-Hung Chen, Yi-Ling Chen, John Y Chiang, Yi-Ting Wang, Chi-Ruei Huang, Hong-Hwa Chen, Hon-Kan Yip

Background: This study investigated whether the combined treatment of melatonin and tofacitinib offers enhanced protection against dextran sulfate sodium-induced acute colitis (AC) in rats. Using CCD-18Co fibroblasts and a rat colitis model, we assessed the anti-inflammatory, anti-apoptotic, and immunomodulatory effects of the combination therapy.

Methods: CCD-18Co cells were grouped as A1 (CCD-18Co), A2 (CCD-18Co + lipopolysaccharide (LPS)), A3 (CCD-18Co + LPS + Melatonin), A4 (CCD-18Co + LPS + Tofacitinib), or A5 (CCD-18Co + LPS + melatonin + tofacitinib). Sprague-Dawley rats were categorized into groups 1 (normal control), 2 (AC), 3 (AC + melatonin), 4 (AC + tofacitinib), and 5 (AC + melatonin + tofacitinib), and the colons were harvested 14 days after AC induction.

Key findings: Cell viability at time points of 24, 48, and 72 h was the highest in A1, lowest in A2, and progressively increased from A3 to A5 (all P < 0.0001). The protein expression levels of inflammatory, DNA-damaged, and autophagic (ratio of LC3-BII to LC3-BI) biomarkers displayed identical patterns of apoptosis among the groups (all P < 0.0001). Additionally, the blood stool, colon leakage, and colon injury scores were the lowest in group 1, highest in group 2, and significantly progressively reduced from groups 3 to 5 (all P < 0.0001). The protein expression of the Janus kinase family-signal transducer and activator of transcriptions/cell-stress signaling, inflammation, oxidative stress, DNA-damaged, apoptotic biomarkers, and cellular expression of immune and inflammatory factors exhibited an identical pattern of colon injury scores among the groups.

Conclusions: Combined melatonin-tofacitinib treatment effectively protected the colon against dextran sulfate sodium-induced damage, mainly through the suppression of Janus kinase family-signal transducer and activator of transcriptions/cell-stress signaling, inflammation, and oxidative stress.

背景:本研究探讨褪黑素和托法替尼联合治疗是否对大鼠葡聚糖硫酸钠诱导的急性结肠炎(AC)有增强的保护作用。利用CCD-18Co成纤维细胞和大鼠结肠炎模型,我们评估了联合治疗的抗炎、抗凋亡和免疫调节作用。方法:将CCD-18Co细胞分为A1 (CCD-18Co)、A2 (CCD-18Co +脂多糖(LPS))、A3 (CCD-18Co +脂多糖+褪黑素)、A4 (CCD-18Co +脂多糖+托法替尼)、A5 (CCD-18Co +脂多糖+褪黑素+托法替尼)。将Sprague-Dawley大鼠分为1组(正常对照)、2组(AC)、3组(AC +褪黑素)、4组(AC +褪黑素+托法替尼)和5组(AC +褪黑素+托法替尼),在AC诱导后第14天收集结肠。关键发现:细胞活力在24、48和72 h时A1最高,A2最低,从A3到A5逐渐增加(均P < 0.0001)。炎症、dna损伤和自噬(LC3-BII与LC3-BI的比值)生物标志物的蛋白表达水平在各组间显示出相同的凋亡模式(均P < 0.0001)。血便、结肠漏、结肠损伤评分以1组最低,2组最高,3 ~ 5组逐渐显著降低(均P < 0.0001)。Janus激酶家族的蛋白表达——转录/细胞应激信号的信号转换器和激活器、炎症、氧化应激、dna损伤、凋亡生物标志物以及免疫和炎症因子的细胞表达在各组中表现出相同的结肠损伤评分模式。结论:褪黑激素-托法替尼联合治疗可有效保护结肠免受葡聚糖硫酸盐钠诱导的损伤,其机制主要是通过抑制Janus激酶家族信号转导和转录/细胞应激信号激活因子、炎症和氧化应激。
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引用次数: 0
The immunomodulatory role of seminal plasma in endometrial receptivity and embryo implantation. 精浆在子宫内膜容受性和胚胎着床中的免疫调节作用。
IF 1.3 Q4 IMMUNOLOGY Pub Date : 2025-08-15 eCollection Date: 2025-01-01 DOI: 10.62347/FNFJ5275
Zahra Kanannejad, Nassim Kheshtchin, Hesamedin Nabavizadeh

Successful implantation and pregnancy rely on complex interactions between the embryo and the maternal reproductive tract. Seminal plasma components, including proteins, cytokines, and growth factors, are pivotal in enhancing endometrial receptivity and inducing maternal immune tolerance to the developing conceptus. Exposure to seminal plasma facilitates pathogen clearance, supports embryo development, and modulates immune responses by altering the endometrial transcriptome and promoting regulatory T cell (Treg) expansion. Proteomic studies have identified seminal plasma factors involved in these processes. Changes in the immunomodulatory components of seminal plasma can diminish its positive effects on the endometrium, potentially resulting in reduced fertility and increased risk of adverse pregnancy outcomes. This review explores how seminal plasma influences maternal immune responses and highlights the clinical implications, particularly its potential to improve outcomes in assisted reproductive technologies (ART) like in vitro fertilization (IVF). Understanding the molecular dialogue between seminal plasma and the endometrium may lead to new strategies for enhancing fertility and promoting healthy pregnancy.

成功的着床和妊娠依赖于胚胎和母体生殖道之间复杂的相互作用。精浆成分,包括蛋白质、细胞因子和生长因子,在增强子宫内膜容受性和诱导母体对发育中的妊娠的免疫耐受中起关键作用。暴露于精浆有助于病原体清除,支持胚胎发育,并通过改变子宫内膜转录组和促进调节性T细胞(Treg)扩增来调节免疫反应。蛋白质组学研究已经确定了参与这些过程的精浆因子。精浆免疫调节成分的改变会削弱其对子宫内膜的积极作用,可能导致生育能力下降和不良妊娠结局的风险增加。这篇综述探讨了精浆如何影响母体免疫反应,并强调了临床意义,特别是它在改善辅助生殖技术(ART)(如体外受精(IVF))结果方面的潜力。了解精浆和子宫内膜之间的分子对话可能会导致提高生育能力和促进健康妊娠的新策略。
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引用次数: 0
DPT has potential to be a prognostic biomarker and its correlation with immune infiltrates in prostate cancer. DPT有可能成为前列腺癌的预后生物标志物及其与免疫浸润的相关性。
IF 1.3 Q4 IMMUNOLOGY Pub Date : 2025-08-15 eCollection Date: 2025-01-01 DOI: 10.62347/BTHG8733
Jieyu Jin, Junchao Feng, Tong Zhou, Jun Cao, Bin Feng, Qingqin Tang, Sheng Zhang, Jun Qiu, Yuting Liang

Background: Prostate cancer (PRAD) poses a significant threat to male health. The tumor microenvironment (TME) plays a crucial role in its development process, yet the regulatory significance of specific extracellular matrix proteins such as Dermatopontin (DPT) in PRAD remains poorly understood.

Methods: A total of 534 PRAD transcriptome profiles were retrieved from The Cancer Genome Atlas (TCGA) database. CIBERSORT and ESTIMATE computational methods were used to quantify the presence of immune and stromal components. Differentially expressed genes (DEGs) were identified based on ImmuneScore and StromalScore, followed by Gene Ontology (GO) and Kyoto Encyclopedia of Genomes (KEGG) pathway enrichment analyses. DPT expression was analyzed in relation to overall survival, TNM staging, immune-related pathways using Gene Set Enrichment Analysis (GSEA), and tumor-infiltrating immune cells (TICs).

Results: A total of 454 DEGs overlapping between high ImmuneScore and StromalScore groups were enriched in immune-related processes and pathways. DPT expression was positively correlated with the survival of PRAD patients, especially the N Stage of PRAD. GSEA revealed that high DPT expression correlated with immune-related activities such as allograft rejection, apical junction, complement, and epithelial mesenchymal transition while low DPT expression was correlated with metabolic pathways such as E2f targets, G2m checkpoint, mitotic spindle, and mitorc1 signaling. Analysis of TICs showed that DPT expression was positively correlated with resting mast cells and neutrophils. Conversely, regulatory T cells, M1 macrophages, M2 macrophages, and resting dendritic cells exhibited negative correlations with DPT expression.

Conclusions: DPT may serve as a novel prognostic biomarker in PRAD, potentially affecting the survival of PRAD patients by regulating the immune environment of TME. These findings provide new insights into the immunomodulatory role of DPT and its potential as a therapeutic target for PRAD.

背景:前列腺癌(PRAD)对男性健康构成重大威胁。肿瘤微环境(tumor microenvironment, TME)在PRAD的发展过程中起着至关重要的作用,但特异性细胞外基质蛋白如皮肤桥蛋白(Dermatopontin, DPT)在PRAD中的调控作用尚不清楚。方法:从癌症基因组图谱(TCGA)数据库中检索534个PRAD转录组图谱。使用CIBERSORT和ESTIMATE计算方法量化免疫和基质成分的存在。基于ImmuneScore和StromalScore对差异表达基因(DEGs)进行鉴定,随后进行基因本体(GO)和京都基因组百科全书(KEGG)途径富集分析。使用基因集富集分析(GSEA)分析DPT表达与总生存率、TNM分期、免疫相关途径和肿瘤浸润免疫细胞(TICs)的关系。结果:在免疫相关的过程和途径中,高免疫评分组和StromalScore组之间共有454度重叠。DPT的表达与PRAD患者的生存呈正相关,尤其是在PRAD的N期。GSEA显示,DPT高表达与免疫相关活动相关,如异体移植物排斥反应、根尖连接、补体和上皮间质转化,而DPT低表达与代谢途径相关,如E2f靶点、G2m检查点、有丝分裂纺锤体和mitorc1信号传导。tic分析显示,DPT的表达与静止肥大细胞和中性粒细胞呈正相关。相反,调节性T细胞、M1巨噬细胞、M2巨噬细胞和静息树突状细胞与DPT表达呈负相关。结论:DPT可能作为一种新的PRAD预后生物标志物,可能通过调节TME的免疫环境影响PRAD患者的生存。这些发现为DPT的免疫调节作用及其作为PRAD治疗靶点的潜力提供了新的见解。
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引用次数: 0
Identification and analysis of immune aging related biomarkers in cartilage and meniscus tissues of osteoarthritis. 骨关节炎软骨和半月板组织中免疫衰老相关生物标志物的鉴定和分析。
IF 1.3 Q4 IMMUNOLOGY Pub Date : 2025-08-15 eCollection Date: 2025-01-01 DOI: 10.62347/XRGR9217
Zhian Chen, Mingjun Li, Yujiao Feng, Yanling Chen, Zhijun Cai, Yongqing Xu, Rongqing Pang

This study aimed to investigate the relationship between immunosenescence and osteoarthritis (OA) and analyze its potential clinical implications. Thus, we conducted transcriptome sequencing by collecting clinical meniscus (Aging_meniscus:Control_meniscus = 3:7) and cartilage tissues (Aging_cartilage:Control_cartilage = 2:6). Meanwhile, immune-related genes (IRGs) and aging-related genes (ARGs) were included in this research. The differentially expressed genes (DEGs) between Aging_meniscus and Control_meniscus as well as Aging_cartilage and Control_cartilage were analyzed by differential analysis, respectively. Then, differentially expressed IRGs (DEIRGs) were generated by crossing DEG with IRGs. Similarly, differentially expressed ARGs (DEARGs) were achieved by intersecting DEG and ARGs. To obtain genes simultaneously associated with immune and aging in both meniscus and cartilage samples, biomarkers were screened out by crossing share.IRGs and share.ARGs overlapped by DEIRGs1 and DEIRGs2 as well as DEARGs1 and DEARGs2, respectively. In addition, the biomarkers' functions were analyzed by gene set enrichment analysis (GSEA). To detect the regulatory mechanism, a miRNA-mRNA-transcription factors (TFs) regulatory network and a X2K network were constructed. Moreover, disease association analysis and potential small molecule drugs for biomarkers were also performed to further reveal the possible role of biomarkers for OA. Then, 3 biomarkers, namely Insulin-like Growth Factor 1 Receptor (IGF1R), Interleukin 7 receptor (IL7R) and Leptin receptor (LEPR), were selected out through the intersection of 14 share.IRGs and 4 share.ARGs. And they were all enriched in 'ribosome' from both meniscus and cartilage samples, and had complex regulatory networks. In all, the expression of IGF1R was markedly up-regulated in OA (P < 0.05). Eventually, mecasermin could stably bind to IGF1R and simvastatin could stably bind to LEPR. It suggested that mecasermin and simvastatin may exhibit significant clinical potential in treating immunosenescence-related OA.

本研究旨在探讨免疫衰老与骨关节炎(OA)的关系,并分析其潜在的临床意义。因此,我们收集临床半月板(Aging_meniscus:Control_meniscus = 3:7)和软骨组织(aging_软骨:control_软骨= 2:6)进行转录组测序。同时,免疫相关基因(IRGs)和衰老相关基因(ARGs)也被纳入本研究。Aging_meniscus和Control_meniscus以及aging_软骨和control_软骨之间的差异表达基因(DEGs)分别通过差异分析进行分析。然后,将DEG与IRGs杂交生成差异表达的IRGs (DEIRGs)。同样,差异表达ARGs (DEARGs)是通过DEG和ARGs相交得到的。为了在半月板和软骨样本中同时获得与免疫和衰老相关的基因,通过交叉份额筛选生物标志物。IRGs和共享。ARGs分别与DEIRGs1和DEIRGs2以及DEARGs1和DEARGs2重叠。此外,通过基因集富集分析(GSEA)分析了生物标志物的功能。为了检测其调控机制,我们构建了mirna - mrna -转录因子(TFs)调控网络和X2K网络。此外,我们还进行了疾病关联分析和潜在的生物标志物小分子药物,以进一步揭示生物标志物在OA中的可能作用。然后,通过14个share的交集,选择出胰岛素样生长因子1受体(IGF1R)、白细胞介素7受体(IL7R)和瘦素受体(LEPR) 3个生物标志物。irg和4共享arg。它们都富含来自半月板和软骨样本的“核糖体”,并且具有复杂的调节网络。总之,IGF1R在OA中表达明显上调(P < 0.05)。最终,mecasermin能够稳定结合IGF1R,辛伐他汀能够稳定结合LEPR。这表明,甲塞蛋白和辛伐他汀在治疗免疫衰老相关的OA方面可能具有显著的临床潜力。
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引用次数: 0
Cell-free DNA fragmentomics: a universal framework for early cancer detection and monitoring. 无细胞DNA片段组学:早期癌症检测和监测的通用框架。
IF 1.3 Q4 IMMUNOLOGY Pub Date : 2025-08-15 eCollection Date: 2025-01-01 DOI: 10.62347/EBRY4326
Wanyu Dong, Wenshi Hu, Yaojuan Lu, Qiping Zheng

Cell-free DNA (cfDNA) fragmentomics has emerged as a powerful and noninvasive approach for cancer detection, characterization, and monitoring. By analyzing genome-wide fragmentation patterns - including fragment length distributions, end motifs, nucleosome footprints, and copy number variations - cfDNA fragmentomics provides high-resolution insights into tumor-specific biological signals even at low tumor burden. This technology offers advantages over conventional mutation-based assays by capturing aggregate structural and epigenomic alterations without requiring prior knowledge of driver mutations. In non-small cell lung cancer (NSCLC), cfDNA fragmentomics enables early detection, discrimination of malignant pulmonary nodules, and post-surgical monitoring of minimal residual disease. Recent studies have demonstrated that fragmentomic risk scores can accurately stratify recurrence risk and improve prognostic sensitivity beyond traditional genomic assays. In hepatocellular carcinoma (HCC), integration of fragment size selection, CNV profiling, and end-motif analysis has led to high-performing models for early diagnosis, particularly in high-risk populations. Moreover, cfDNA fragmentomics has proven effective in detecting malignant transformation in patients with neurofibromatosis-associated peripheral nerve sheath tumors, distinguishing benign from premalignant or malignant lesions with high precision. Expanding beyond these major cancers, fragmentomic approaches have demonstrated diagnostic potential in gastric, urological, hematologic, and pediatric malignancies. Notably, the DELFI-TF (DNA Evaluation of Fragments for early Interception-Tumor Fraction) framework has shown prognostic relevance by correlating pre-treatment cfDNA features with survival outcomes in colorectal and lung cancer patients, outperforming conventional imaging. All of these results highlight the translational importance of cfDNA fragmentomics as a cutting-edge precision oncology tool. Its continued integration into clinical workflows may redefine early cancer detection, facilitate subtype-specific interventions, and enable real-time, individualized treatment monitoring.

游离DNA (cfDNA)片段组学已经成为一种强大的、无创的癌症检测、表征和监测方法。通过分析全基因组片段模式——包括片段长度分布、末端基序、核小体足迹和拷贝数变化——cfDNA片段组学即使在低肿瘤负荷下也能提供高分辨率的肿瘤特异性生物信号。与传统的基于突变的分析相比,该技术具有优势,它可以捕获总体结构和表观基因组的改变,而不需要事先了解驱动突变。在非小细胞肺癌(NSCLC)中,cfDNA片段组学可以早期发现、鉴别恶性肺结节,并在术后监测微小残留疾病。最近的研究表明,片段组学风险评分可以准确地对复发风险进行分层,并比传统的基因组分析提高预后敏感性。在肝细胞癌(HCC)中,片段大小选择、CNV分析和末端基序分析的整合导致了早期诊断的高性能模型,特别是在高危人群中。此外,cfDNA片段组学已被证明可有效检测神经纤维瘤病相关周围神经鞘肿瘤患者的恶性转化,并能高精度地区分良性病变与癌前病变或恶性病变。除了这些主要的癌症之外,碎片组学方法已经证明了在胃、泌尿、血液和儿科恶性肿瘤中的诊断潜力。值得注意的是,DELFI-TF(早期阻断肿瘤片段的DNA评估)框架通过将治疗前cfDNA特征与结直肠癌和肺癌患者的生存结果相关联,显示出预后相关性,优于传统成像。所有这些结果都突出了cfDNA片段组学作为尖端精确肿瘤学工具的翻译重要性。它继续整合到临床工作流程中,可能会重新定义早期癌症检测,促进亚型特异性干预,并实现实时、个性化的治疗监测。
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引用次数: 0
Impact of lactobacillus probiotics on vaccine response in diabetic rats: modulation of inflammatory cytokines. 益生乳杆菌对糖尿病大鼠疫苗应答的影响:炎症细胞因子的调节。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-06-15 eCollection Date: 2025-01-01 DOI: 10.62347/HUZJ9149
Jehan Alrahimi, Asmaa Alrobai, Alawiah Alhebshi, Hadel M Alghabban, Sahar El Hadad

Lymph nodes are essential for immune function as they contain immune cells that activate responses and filter pathogens from lymph. This study investigates how diabetes-related metabolic challenges affect immune function, focusing on the impact of Lactobacillus probiotics on lymph node responses to meningococcal vaccines in thirty male Albino rats with Streptozotocin-induced diabetes, established two weeks before vaccination. The diabetic rats were divided equally and randomly into three groups: one untreated (UD group), one receiving two shots of the meningococcal vaccine (DM group), and one receiving the same vaccination regimen alongside oral doses of Lactobacillus rhamnosus probiotics (DML group). We monitored the rats' weights and measured the expression levels of inflammatory cytokines (IL-1β, TNF-α, and IL-2) in their lymph nodes as markers of immune activation after vaccination. Diabetic rats vaccinated against meningococcal disease showed increased levels of IL-1β and TNF-α, which showed a significant reduction by Lactobacillus supplementation after three weeks. However, following the second vaccination, Lactobacillus significantly increased IL-1β and TNF-α levels. Also, Lactobacillus appeared to modulate the initial spike in IL-2, with a notable increase observed five weeks after the second vaccine dose. Notably, the vaccination protocol did not affect the body weight of the diabetic rats. These findings suggest that while the vaccine elevates inflammatory cytokine levels in the lymph nodes of diabetic rats, Lactobacillus may help mitigate these responses and regulate IL-2 levels, indicating its potential value in enhancing diabetes management, optimizing vaccine effectiveness, and addressing autoimmune issues in diabetic individuals.

淋巴结对免疫功能至关重要,因为它们含有激活反应和过滤淋巴病原体的免疫细胞。本研究探讨了糖尿病相关代谢挑战如何影响免疫功能,重点关注益生乳杆菌对30只患有链脲佐菌素诱导的糖尿病的雄性白化大鼠对脑膜炎球菌疫苗的淋巴结反应的影响,这些大鼠在接种疫苗前两周建立。将糖尿病大鼠平均随机分为三组:一组未经治疗(UD组),一组接受两次脑膜炎球菌疫苗(DM组),一组接受相同的疫苗接种方案并口服剂量的鼠李糖乳杆菌益生菌(DML组)。我们监测了大鼠的体重,并测量了免疫接种后淋巴结中炎症因子(IL-1β、TNF-α和IL-2)的表达水平,作为免疫激活的标志。接种脑膜炎球菌病疫苗的糖尿病大鼠IL-1β和TNF-α水平升高,三周后补充乳杆菌显著降低。然而,在第二次接种后,乳酸菌显著增加了IL-1β和TNF-α水平。此外,乳酸菌似乎调节了IL-2的初始峰值,在第二次接种疫苗后5周观察到显著增加。值得注意的是,接种方案对糖尿病大鼠的体重没有影响。这些发现表明,虽然疫苗提高了糖尿病大鼠淋巴结中的炎症细胞因子水平,乳酸杆菌可能有助于减轻这些反应并调节IL-2水平,表明其在加强糖尿病管理、优化疫苗有效性和解决糖尿病个体自身免疫性问题方面的潜在价值。
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引用次数: 0
IGLL5 has potential to be a prognostic biomarker and its correlation with immune infiltrates in breast cancer. IGLL5有可能成为乳腺癌的预后生物标志物及其与免疫浸润的相关性。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-06-15 eCollection Date: 2025-01-01 DOI: 10.62347/XLCY5727
Junchao Feng, Yuhan Hou, Chang Liu, Youyou Wang, Weibo Chen, Yulong Liu, Huahui Bian

Background: The tumor microenvironment (TME) of breast cancer (BRCA) influences disease progression through dynamic interactions between immunity and stroma, but its key regulatory molecules and prognostic value remain to be elucidated. The aim of this study was to explore the prognostic potential of immunoglobulin λ-like polypeptide 5 (IGLL5) in BRCA and its association with immune infiltration in TME.

Methods: 1178 BRCA cases were obtained from The Cancer Genome Atlas (TCGA) database. CIBERSORT and ESTIMATE computational methods were used to quantify the composition of tumor-infiltrating immune cells (TICs) and the presence of immune and stromal components. Prognostic indicator closely associated with BRCA was identified by Cox regression analysis and protein-protein interaction (PPI) network construction. Through Gene Set Enrichment Analysis (GSEA) and other means, the correlations between IGLL5 expression and patient survival, immune activities, metabolic pathways, and immune cell types were studied.

Results: Overall survival was significantly prolonged in patients with high IGLL5 expression (HR=0.62, 95% CI 0.45-0.86, P=0.013) and positively correlated with immune-activating pathways (complement signaling, interferon response) and anti-tumor TICs (CD8+ T cells, M1 macrophages) (r>0.3, P<0.001) and negatively correlated with tumor-promoting TICs (M2 macrophages, resting NK cells). The low IGLL5 group was enriched in metabolic pathways (estrogen response, oxidative phosphorylation), suggesting that it may promote immune escape through metabolic reprogramming.

Conclusion: IGLL5 is a novel prognostic marker for BRCA, and its expression level affects patient survival by modulating TME immune infiltration and metabolic reprogramming. This study provides a theoretical basis for IGLL5-directed immunotherapeutic strategies (e.g., combining PD-1 inhibitors), and its mechanism needs to be verified by multicenter clinical cohorts and functional experiments in the future.

背景:乳腺癌(BRCA)的肿瘤微环境(tumor microenvironment, TME)通过免疫与基质之间的动态相互作用影响疾病进展,但其关键调控分子及其预后价值尚不清楚。本研究的目的是探讨免疫球蛋白λ样多肽5 (IGLL5)在BRCA中的预后潜力及其与TME免疫浸润的关系。方法:从癌症基因组图谱(TCGA)数据库中获取1178例BRCA病例。使用CIBERSORT和ESTIMATE计算方法量化肿瘤浸润免疫细胞(tic)的组成以及免疫和基质成分的存在。通过Cox回归分析和蛋白-蛋白相互作用(PPI)网络构建,确定与BRCA密切相关的预后指标。通过基因集富集分析(Gene Set Enrichment Analysis, GSEA)等手段,研究IGLL5表达与患者生存、免疫活性、代谢途径、免疫细胞类型的相关性。结果:IGLL5高表达患者的总生存期显著延长(HR=0.62, 95% CI 0.45-0.86, P=0.013),且与免疫激活途径(补体信号、干扰素应答)和抗肿瘤tic (CD8+ T细胞、M1巨噬细胞)(r>0.3, P)呈正相关。结论:IGLL5表达水平通过调节TME免疫浸润和代谢重编程影响BRCA患者的预后。本研究为igll5导向的免疫治疗策略(如联合PD-1抑制剂)提供了理论基础,其机制有待于未来多中心临床队列和功能实验的验证。
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引用次数: 0
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American journal of clinical and experimental immunology
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