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Interaction between intratumoral microbiota and neutrophils influences tumor progression. 瘤内微生物群与中性粒细胞之间的相互作用影响着肿瘤的进展。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-10-25 eCollection Date: 2024-01-01 DOI: 10.62347/ITSO6879
Mengyuan Hu, Wenshi Hu, Ziyu Zhang

In recent years, complex interactions between intratumoral bacteria and neutrophils have been identified as significant factors in tumor occurrence and development. This commentary synthesizes findings from the past five years to explore these interactions. It is observed that during tumor progression, intratumoral bacteria promote neutrophil infiltration and the formation of neutrophil extracellular traps (NETs), which in turn drive tumor development and metastasis. Conversely, infiltrating neutrophils are also capable of slowing tumor progression by limiting the number of intratumoral bacteria. This dual role underscores a potential avenue for improving cancer treatment outcomes.

近年来,瘤内细菌和中性粒细胞之间复杂的相互作用已被确定为肿瘤发生和发展的重要因素。这篇评论综合了过去五年的研究成果,探讨了这些相互作用。据观察,在肿瘤进展过程中,瘤内细菌会促进中性粒细胞浸润和中性粒细胞胞外陷阱(NET)的形成,进而推动肿瘤的发展和转移。相反,浸润的中性粒细胞也能通过限制瘤内细菌的数量来减缓肿瘤的发展。这种双重作用强调了改善癌症治疗效果的潜在途径。
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引用次数: 0
Application research of core stability training based on biofeedback in postpartum rectus abdominis muscle separation. 基于生物反馈的核心稳定性训练在产后腹直肌分离中的应用研究。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-10-25 eCollection Date: 2024-01-01 DOI: 10.62347/XXUS7058
Xin He, Jiayi Liu, Renxin Ji

Objective: To investigate the efficacy of core stabilization training based on biofeedback for postpartum rectus abdominis muscle separation.

Methods: Thirty patients aged 20-35 years with rectus diastasis after pregnancy were randomly divided into experimental group and control group. The control group received routine core stabilization training, including abdominal breathing training, bridge exercises and kneeling abdominal exercises. The experimental group performed core stabilization training based on biofeedback. Before and after intervention, rectus abdominis muscle distance, waist circumference and abdominal circumference were evaluated in the two groups, and rectus abdominis muscle separation, waist circumference and abdominal circumference improvement were analyzed in the two groups.

Results: There was no significant difference between the two groups before treatment (P > 0.05), and there was significant difference between the two groups after treatment and before treatment. After treatment, the experimental group was further improved compared with the control group. After treatment, the distance between rectus muscles, abdominal circumference and waist circumference in both groups were decreased compared with those before treatment (P < 0.05). The distance between rectus muscles, abdominal circumference and waist circumference of the experimental group were smaller than those of the control group (P < 0.05).

Conclusion: Core stabilization training based on biofeedback can effectively improve the symptoms of patients with postpartum rectus diastasis, help to reduce waist circumference and abdominal circumference, and accelerate the recovery of postpartum body shape.

目的:研究基于生物反馈的核心稳定训练对产后腹直肌分离的疗效:研究基于生物反馈的核心稳定训练对产后腹直肌分离的疗效:将 30 名年龄在 20-35 岁之间的产后腹直肌分离患者随机分为实验组和对照组。对照组接受常规核心稳定训练,包括腹式呼吸训练、桥式运动和跪式腹部运动。实验组进行基于生物反馈的核心稳定训练。在干预前后,对两组的腹直肌距离、腰围和腹围进行评估,并分析两组的腹直肌分离度、腰围和腹围改善情况:结果:两组治疗前无明显差异(P>0.05),治疗后与治疗前有明显差异。治疗后,实验组比对照组有进一步改善。治疗后,两组的直肌间距、腹围和腰围均比治疗前有所下降(P < 0.05)。实验组的直肌间距、腹围和腰围均小于对照组(P < 0.05):基于生物反馈的核心稳定训练能有效改善产后直肌舒张症患者的症状,有助于减少腰围和腹围,加快产后体形的恢复。
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引用次数: 0
Preliminary findings on the absence of PEPITEM release in B cells isolated from Saudi donors: implications for expanded population studies. 关于从沙特捐献者体内分离出的 B 细胞不释放 PEPITEM 的初步发现:对扩大人群研究的影响。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-10-25 eCollection Date: 2024-01-01 DOI: 10.62347/XNNO3661
Mohammed Alassiri, Asma Alanazi, Tlili Barhoumi, Bahauddeen Alrfaei, Maisa Alanazi, Mamoon Rashid, Aiman S Alhazmi, Mohammed Alasseiri, Abdulrahman AlMefleh, Mohammad Boudjelal, Hayat Shaibah, Khawlah Almuhalhil, Fatmah A Mansour, Zeyad Alehaideb, Bandar Alghanem

Background: Adiponectin (AQ) plays a role in regulating immune responses. Previous research indicates that B cells can affect T cell transmigration via the adiponectin-induced peptide PEPITEM in Caucasians. This study explores whether this mechanism is also applicable to Saudi populations, considering potential ethnic variations in immune response.

Methods: We conducted unbiased peptidomic screen on B cells, NK cells, and monocytes isolated from the peripheral blood of male healthy Saudi donors. The cells were stimulated with AQ, and the secretion of PEPITEM and other peptides was assessed using liquid chromatography-mass spectrometry (LC-MS/MS). Flow cytometry was utilized to confirm the purity of isolated cell populations and to verify the expression of adiponectin receptors AR1 and AR2.

Results: PEPITEM was not detected in the supernatants of AQ-stimulated B cells, NK cells, or monocytes. All three cell populations were isolated and purified with high purity, confirmed by flow cytometry showing AR1 and AR2 expression on the surface of these cells. Specifically, less than 47% of B cells expressed ARs, with AR1 at 12% and AR2 at 17%. AQ stimulation increased the number of identified peptides in B cells and monocytes but decreased peptide numbers in NK cells. Dimensionality reduction analysis demonstrated clear segregation of cell types, with strong reproducibility across technical replicates.

Conclusion: The inability of B cells to release PEPITEM in response to AQ stimulation is an interesting finding and it needs more confirmatory tests and experiments, however; a hypothesis about the impact of predisposing factors, such as ethnicity could be formulated and tested in the future.

背景:脂肪连接素(AQ)在调节免疫反应中发挥作用。以前的研究表明,在白种人中,B 细胞可通过脂肪连接素诱导的多肽 PEPITEM 影响 T 细胞的迁移。考虑到免疫反应中潜在的种族差异,本研究探讨了这一机制是否也适用于沙特人:我们对从沙特男性健康捐献者外周血中分离出的 B 细胞、NK 细胞和单核细胞进行了无偏见的肽组筛选。用 AQ 刺激细胞,并使用液相色谱-质谱联用仪(LC-MS/MS)评估 PEPITEM 和其他肽的分泌情况。利用流式细胞术确认分离细胞群的纯度,并验证脂肪素受体 AR1 和 AR2 的表达:结果:在AQ刺激的B细胞、NK细胞或单核细胞的上清液中均未检测到PEPITEM。流式细胞仪显示这些细胞表面均有 AR1 和 AR2 表达,从而证实了这三种细胞群的分离和纯化纯度都很高。具体来说,只有不到 47% 的 B 细胞表达 ARs,其中 AR1 为 12%,AR2 为 17%。AQ刺激增加了B细胞和单核细胞中识别出的肽的数量,但减少了NK细胞中肽的数量。降维分析显示了细胞类型的明显分离,并且在不同技术重复中具有很强的可重复性:B细胞在AQ刺激下不能释放PEPITEM是一个有趣的发现,需要更多的确认测试和实验。
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引用次数: 0
Characterization of immortalized human podocytes infected with lentivirus as an in vitro model of viral infection-associated podocytopathy. 用慢病毒感染永生化人类荚膜细胞作为病毒感染相关荚膜细胞病的体外模型的特征。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-10-25 eCollection Date: 2024-01-01 DOI: 10.62347/BBCX1142
Peng Yu, Xi Jin, Weijun Huang, Jingjing Wang, Sipang Zhang, Lu Ren, Haitao Zhang, Shaolin Shi

A large number of studies have shown the association of kidney disease with viral infections in the body. Viral infections cause kidney injury in two manners, the systemic inflammation (cytokine storm) and the direct infection of kidney cells. Concerning direct viral infection of podocytes, the mechanism underlying virus-induced podocyte injury remains largely unknown and requires effective experimental models to facilitate its study. Here, we performed molecular characterization of immortalized human podocyte cell line (HPC) infected with lentivirus by RNA-seq. Bioinformatics analysis revealed a strong innate immune response in the cells, including interferon production and signaling. Meanwhile, activations of ferroptosis pathway and TNF-alpha signaling were also found, consistent with an impaired viability of the cells. Lentiviral infection also upregulated expression of APOL1 as observed in patients with HIV associated nephropathy (HIVAN) and diabetic nephropathy (DN). Interestingly, when the lentiviral infected cells were treated with Adriamycin (ADR), the ADR-associated signaling pathways were not interfered and remained activated as that in the cells treated with ADR only, suggesting that the virus and ADR have distinct mechanisms in damaging podocytes. Thus, the lentivirus-infected HPC cells represent a useful in vitro model of viral infection-associated podocytopathy.

大量研究表明,肾脏疾病与体内病毒感染有关。病毒感染导致肾脏损伤的方式有两种,一种是全身性炎症(细胞因子风暴),另一种是直接感染肾脏细胞。关于病毒直接感染荚膜细胞,病毒诱导荚膜细胞损伤的机制在很大程度上仍是未知的,需要有效的实验模型来促进研究。在这里,我们通过 RNA-seq 对感染慢病毒的永生化人荚膜细胞系(HPC)进行了分子鉴定。生物信息学分析表明,细胞中存在强烈的先天性免疫反应,包括干扰素的产生和信号转导。同时,还发现了铁变态反应通路和 TNF-α 信号的激活,这与细胞活力受损相一致。慢病毒感染还能上调 APOL1 的表达,这在 HIV 相关性肾病(HIVAN)和糖尿病肾病(DN)患者中也能观察到。有趣的是,当用阿霉素(ADR)处理慢病毒感染的细胞时,与 ADR 相关的信号通路没有受到干扰,仍然与只用 ADR 处理的细胞一样处于激活状态,这表明病毒和 ADR 在损伤荚膜细胞方面具有不同的机制。因此,慢病毒感染的 HPC 细胞是病毒感染相关荚膜细胞病变的有用体外模型。
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引用次数: 0
Clinical utility of multi-row spiral CT in diagnosing hepatic nodular lesions, gastric cancer, and Crohn's disease: a comprehensive meta-analysis. 多排螺旋 CT 在诊断肝结节性病变、胃癌和克罗恩病方面的临床实用性:一项综合荟萃分析。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-08-25 eCollection Date: 2024-01-01 DOI: 10.62347/SREJ4505
Ming Xu, Yinyun Chen, Dan Liu, Lile Wang, Minghao Wu

A retrieval of relevant literature on hepatic nodular lesions, gastric cancer (GC), and Crohn's disease (CD) was conducted from Chinese and English databases. Meta-analysis was performed using Review Manager 5.4 software and the MIDAS package in Stata 18.0. Results from 11 studies comprising 1847 patients were synthesized. The pooled sensitivity, specificity, positive likelihood ratio, negative likelihood ratio, and diagnostic odds ratio with 95% confidence intervals were: 0.91 (0.84-0.95), 0.73 (0.65-0.79), 3.30 (2.60-4.30), 0.13 (0.07-0.23), and 26.00 (12.00-53.00), respectively. Significant statistical heterogeneity was found in sensitivity and specificity (P<0.05), with specificity heterogeneity originating from n, type, and mode (P<0.05). Sensitivity and specificity for n, type, object, and mode were non-heterogeneous (P>0.05). The combined AUC from SROC curve analysis of the 11 studies was 0.85. Deeks' funnel plot asymmetry test yielded a p-value of 0.01, indicating potential bias across studies in the diagnostic odds ratio funnel plot. Fagan's nomogram demonstrated that using CT for diagnostic modeling increased the post-test probability of correctly diagnosing hepatic nodular lesions, GC, and CD from 50.00% to 77.00%. Overall, multi-detector CT shows good diagnostic value for hepatic nodular lesions, GC, and CD, supporting its clinical flexibility based on patient-specific considerations.

从中英文数据库中检索了有关肝结节病变、胃癌(GC)和克罗恩病(CD)的相关文献。使用Review Manager 5.4软件和Stata 18.0中的MIDAS软件包进行了元分析。综合了 11 项研究、1847 名患者的结果。汇总的敏感性、特异性、阳性似然比、阴性似然比和诊断几率比(95% 置信区间)分别为分别为 0.91(0.84-0.95)、0.73(0.65-0.79)、3.30(2.60-4.30)、0.13(0.07-0.23)和 26.00(12.00-53.00)。在灵敏度和特异性方面发现了显著的统计学异质性(P0.05)。对 11 项研究进行 SROC 曲线分析得出的综合 AUC 为 0.85。Deeks的漏斗图不对称检验得出的P值为0.01,表明诊断几率比漏斗图中各研究之间可能存在偏差。Fagan 的提名图显示,使用 CT 进行诊断建模可将正确诊断肝结节性病变、GC 和 CD 的检测后概率从 50.00% 提高到 77.00%。总体而言,多探头 CT 对肝结节性病变、GC 和 CD 显示出良好的诊断价值,支持其基于患者特异性考虑的临床灵活性。
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引用次数: 0
Effectiveness study of surface electromyography combined with spine 3D data system to evaluate scoliosis. 表面肌电图结合脊柱三维数据系统评估脊柱侧弯的有效性研究。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-08-25 eCollection Date: 2024-01-01 DOI: 10.62347/BLSO4420
Li-Huang Zhang, Yong Bao, Xiao-Pei Sun, Jie-Jian Shi, Jie Zhang, Jing-Yun Xu, Qing Xie

Objective: To evaluate the clinical effectiveness of surface electromyography combined with a spine 3D data system.

Methods: 10 idiopathic scoliosis patients (age: 12.90±3.67 years, height: 155.90±20.07 cm, weight: 48.00±12.86 kg, 6 major thoracic lateral bends and 4 lumbar bends) who were selected to attend the outpatient clinic of Ruijin Rehabilitation Hospital, First diagnosed as scoliosis by imaging examination (EOS system), evaluation by using the surface electromyography monitoring system, the radiation-free 3D spine data acquisition and analysis system, the surface electromyography of the paravertebral muscles (root mean square value (RMS) of the resting standing and action position of the spine) and the Cobb angle of scoliosis were recorded.

Results: The RMS of the convex side was larger than that of the concave side in the two postures (P<0.05), and The RMS value of bilateral action position was significantly higher than that of rest position (P<0.05). There was no correlation between RMS ratio and Cobb angle in two positions of thoracic scoliosis (P>0.05). There was a significant correlation between the RMS ratio at rest position of lumbar scoliosis and Cobb angle. At rest, the RMS value of convex side was significantly correlated with the Cobb angle measured by the EOS system and the 3D data system (P<0.05, of which P<0.01). The Cobb angle measured by 3D data system and the EOS system was significantly correlated (P<0.01).

Conclusion: Surface EMG can be used to evaluate the motor function of paravertebral muscles on both sides of scoliosis patients. The new 3D data system has high accuracy in evaluating scoliosis. The combination of the two can dynamically evaluate scoliosis, which is more clinically effective.

目的:评估表面肌电图与脊柱三维数据系统相结合的临床效果:方法:选取10例特发性脊柱侧弯患者(年龄:12.90±3.67岁,身高:155.90±20.07cm,体重:48.00±12.86 kg,胸大弯6例,腰大弯4例),经影像学检查(EOS系统)确诊为脊柱侧弯,采用表面肌电监测系统、无辐射三维脊柱数据采集分析系统进行评估,记录椎旁肌表面肌电(脊柱静止站立位和活动位的均方根值)和脊柱侧弯的Cobb角:两种姿势下,凸侧的均方根值均大于凹侧(P0.05)。腰椎侧弯静息姿势下的有效值比与 Cobb 角之间存在明显的相关性。在静息状态下,凸侧的 RMS 值与 EOS 系统和三维数据系统测量的 Cobb 角有明显相关性(PC结论:表面肌电图可用于评估脊柱侧凸患者两侧椎旁肌肉的运动功能。新的三维数据系统在评估脊柱侧弯方面具有很高的准确性。两者结合可动态评估脊柱侧弯,临床效果更好。
{"title":"Effectiveness study of surface electromyography combined with spine 3D data system to evaluate scoliosis.","authors":"Li-Huang Zhang, Yong Bao, Xiao-Pei Sun, Jie-Jian Shi, Jie Zhang, Jing-Yun Xu, Qing Xie","doi":"10.62347/BLSO4420","DOIUrl":"10.62347/BLSO4420","url":null,"abstract":"<p><strong>Objective: </strong>To evaluate the clinical effectiveness of surface electromyography combined with a spine 3D data system.</p><p><strong>Methods: </strong>10 idiopathic scoliosis patients (age: 12.90±3.67 years, height: 155.90±20.07 cm, weight: 48.00±12.86 kg, 6 major thoracic lateral bends and 4 lumbar bends) who were selected to attend the outpatient clinic of Ruijin Rehabilitation Hospital, First diagnosed as scoliosis by imaging examination (EOS system), evaluation by using the surface electromyography monitoring system, the radiation-free 3D spine data acquisition and analysis system, the surface electromyography of the paravertebral muscles (root mean square value (RMS) of the resting standing and action position of the spine) and the Cobb angle of scoliosis were recorded.</p><p><strong>Results: </strong>The RMS of the convex side was larger than that of the concave side in the two postures (P<0.05), and The RMS value of bilateral action position was significantly higher than that of rest position (P<0.05). There was no correlation between RMS ratio and Cobb angle in two positions of thoracic scoliosis (P>0.05). There was a significant correlation between the RMS ratio at rest position of lumbar scoliosis and Cobb angle. At rest, the RMS value of convex side was significantly correlated with the Cobb angle measured by the EOS system and the 3D data system (P<0.05, of which P<0.01). The Cobb angle measured by 3D data system and the EOS system was significantly correlated (P<0.01).</p><p><strong>Conclusion: </strong>Surface EMG can be used to evaluate the motor function of paravertebral muscles on both sides of scoliosis patients. The new 3D data system has high accuracy in evaluating scoliosis. The combination of the two can dynamically evaluate scoliosis, which is more clinically effective.</p>","PeriodicalId":72163,"journal":{"name":"American journal of clinical and experimental immunology","volume":"13 4","pages":"195-201"},"PeriodicalIF":1.4,"publicationDate":"2024-08-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11411156/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142302236","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ultrashort plasma cell-free DNA: a novel non-invasive marker for cancer diagnostics. 超短等离子体无细胞 DNA:癌症诊断的新型无创标记物。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-08-25 eCollection Date: 2024-01-01 DOI: 10.62347/UQTM2281
Guodong Zhao

Recent studies have shown that ultrashort plasma cell-free DNA (uscfDNA), a novel type of cfDNA fragment approximately 50 nucleotides long, differs from conventional monocyte-derived cfDNA in several aspects, including specific extraction requirements and a higher incidence of tumor-specific genetic alterations. uscfDNA shows promise in enhancing liquid biopsy sensitivity for cancer detection, with distinct methylation profiles observed in cancer patients. These findings suggest uscfDNA analysis could significantly improve non-invasive cancer diagnostics, offering new avenues for early detection and personalized medicine strategies.

最近的研究表明,超短无血浆细胞DNA(uscfDNA)是一种新型的cfDNA片段,长约50个核苷酸,它与传统的单核细胞衍生cfDNA有多方面的不同,包括特定的提取要求和更高的肿瘤特异性基因改变发生率。这些研究结果表明,uscfDNA 分析可显著改善非侵入性癌症诊断,为早期检测和个性化医疗策略提供新途径。
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引用次数: 0
Advance in the mechanism and clinical research of myalgia in long COVID. 长COVID肌痛的机制和临床研究进展。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-08-25 eCollection Date: 2024-01-01 DOI: 10.62347/TXVO6284
Xiuyun Zhai, Weijun Wu, Siliang Zeng, Yun Miao

As severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) continues to evolve, mortality rates of coronavirus disease 2019 (COVID-19) have significantly decreased. However, a variable proportion of patients exhibit persistent prolonged symptoms of COVID-19 infection (long COVID). This virus primarily attacks respiratory system, but numerous individuals complain persistent skeletal muscle pain or worsening pre-existing muscle pain post COVID-19, which severely affects the quality of life and recovery. Currently, there is limited research on the skeletal muscle pain in long COVID. In this brief review, we review potential pathological mechanisms of skeletal muscle pain in long COVID, and summarize the various auxiliary examinations and treatments for skeletal muscle pain in long COVID. We consider abnormal activation of inflammatory response, myopathy, and neurological damages as pivotal pathological mechanisms of skeletal muscle pain in long COVID. A comprehensive examination is significantly important in order to work out effective treatment plans and relieve skeletal muscle pain. So far, rehabilitation interventions for myalgia in long COVID contain but are not limited to drug, nutraceutical therapy, gut microbiome-targeted therapy, interventional therapy and strength training. Our study provides a potential mechanism reference for clinical researches, highlighting the importance of comprehensive approach and management of skeletal muscle pain in long COVID. The relief of skeletal muscle pain will accelerate rehabilitation process, improve activities of daily living and enhance the quality of life, promoting individuals return to society with profound significance.

随着严重急性呼吸系统综合征冠状病毒 2(SARS-CoV-2)的不断发展,冠状病毒病 2019(COVID-19)的死亡率已显著下降。然而,仍有不同比例的患者表现出持续时间较长的 COVID-19 感染症状(长 COVID)。这种病毒主要侵袭呼吸系统,但许多人在感染COVID-19后会出现持续性骨骼肌疼痛或原有肌肉疼痛加重,严重影响生活质量和康复。目前,有关长效 COVID 引起的骨骼肌疼痛的研究十分有限。在这篇简短的综述中,我们回顾了长 COVID 骨骼肌疼痛的潜在病理机制,并总结了长 COVID 骨骼肌疼痛的各种辅助检查和治疗方法。我们认为炎症反应异常激活、肌病和神经损伤是长程COVID骨骼肌疼痛的关键病理机制。全面的检查对于制定有效的治疗方案和缓解骨骼肌疼痛非常重要。迄今为止,针对长COVID肌痛的康复干预措施包括但不限于药物、营养治疗、肠道微生物靶向治疗、介入治疗和力量训练。我们的研究为临床研究提供了潜在的机制参考,强调了综合方法和管理长程COVID骨骼肌疼痛的重要性。骨骼肌疼痛的缓解将加速康复进程,改善日常生活活动,提高生活质量,对促进个体回归社会具有深远意义。
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引用次数: 0
The relationship between metabolites and gout: a Mendelian randomization study. 代谢物与痛风之间的关系:孟德尔随机研究。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-08-25 eCollection Date: 2024-01-01 DOI: 10.62347/UTEW4812
Zhixiang Ding, Liting Wu, Ting Xu, Cui Zhang, Yi Liang, Jia Li, Wenfang Zhuang

Background: Gout is closely tied to metabolism, yet there is limited evidence on how metabolites may cause or prevent the condition.

Methods: This study utilized a two-sample Mendelian randomization (MR) analysis to evaluate the causal relationship between 1,400 serum metabolites and gout. We primarily employed the inverse variance-weighted (IVW) method to estimate causal effects, supplemented by MR-Egger regression, weighted median, simple mode, and weighted mode for comprehensive evaluations. Additionally, we conducted tests for pleiotropy and heterogeneity.

Results: After a rigorous selection process, we identified eight known metabolites and four unknown metabolites associated with gout. Among the eight known metabolites, Glucuronide of piperine metabolite C17H21NO3 and the Phosphate to mannose ratio were positively associated with an increased risk of gout. Conversely, levels of 5 alpha-androstan-3 beta, 17 alpha-diol disulfate, Pantoate, N-carbamoylalanine, Sphingomyelin (d18:0/20:0, d16:0/22:0), Hydroxypalmitoyl sphingomyelin (d18:1/16:0(OH)), and Mannose were linked to a decreased risk of gout.

Conclusion: This study identified eight metabolites from 1,400 blood samples significantly linked to gout risk. Integrating genomics and metabolomics offers valuable insights for gout screening and prevention, indicating that specific blood metabolites can help identify individuals at higher risk.

背景:痛风与新陈代谢密切相关:痛风与新陈代谢密切相关,但关于代谢物如何导致或预防痛风的证据却很有限:本研究采用双样本孟德尔随机分析法(MR)评估了 1400 种血清代谢物与痛风之间的因果关系。我们主要采用反方差加权法(IVW)来估计因果效应,并辅以MR-Egger回归法、加权中位数法、简单模式法和加权模式法进行综合评估。此外,我们还对多义性和异质性进行了检验:经过严格筛选,我们确定了与痛风相关的 8 种已知代谢物和 4 种未知代谢物。在这8种已知代谢物中,胡椒碱代谢物C17H21NO3的葡萄糖醛酸苷和磷酸与甘露糖的比率与痛风风险的增加呈正相关。相反,5 α-雄甾烷-3 β、17 α-二醇二硫酸盐、泛酸、N-氨基甲酰丙氨酸、鞘磷脂(d18:0/20:0、d16:0/22:0)、羟基棕榈酰鞘磷脂(d18:1/16:0(OH))和甘露糖的水平与痛风风险的降低有关:这项研究从1,400份血液样本中发现了与痛风风险密切相关的8种代谢物。基因组学和代谢组学的结合为痛风的筛查和预防提供了宝贵的见解,表明特定的血液代谢物有助于识别高风险人群。
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引用次数: 0
Characterization of tumor suppressors and oncogenes evaluated from TCGA cancers. 从 TCGA 癌症中评估肿瘤抑制因子和癌基因的特征。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2024-08-25 eCollection Date: 2024-01-01 DOI: 10.62347/XMZW6604
Claire Shen, Richard Geng, Sissi Zhu, Michael Huang, Jeffrey Liang, Binze Li, Yongsheng Bai

Mutations in oncogenes and tumor suppressor genes can significantly impact cellular function during cancer development. A comprehensive analysis of their mutation patterns and significant gene ontology terms can provide insights into cancer emergence and suggest potential targets for drug development. This study analyzes twelve cancer subtypes by focusing on significant genetic and molecular factors. Two common genetic mutations associated with cancer are single nucleotide variants (SNVs) and copy number alterations (CNAs). Oncogenes, derived from mutated proto-oncogenes, disrupt normal cell functions and promote cancer, while tumor suppressor genes, often inactivated by mutations, regulate cell processes like proliferation and DNA damage response. This study analyzed datasets from The Cancer Genome Atlas (TCGA), which provides extensive genomic data across various cancers. In our analysis results, many genes with significant p-values based on Kaplan Meier gene expression data were identified in eight cancers (BRCA, BLCA, HNSC, KIRC, LUAD, KIRP, LUSC, STAD). Moreover, STAD is the only cancer for genes with both significant p-values and functional terms reported. Interestingly, we found that LIHC was the cancer reported with only one CNA mutated gene and its survival plot p-value being significant. Additionally, KICH has no reported significant genes at all. Our study proposed the relationship between tumor suppressor and oncogenes and shed light on cancer tumorigenesis due to genetic mutations.

癌基因和抑癌基因的突变会在癌症发展过程中对细胞功能产生重大影响。对它们的突变模式和重要的基因本体术语进行全面分析,可以深入了解癌症的发生,并提出潜在的药物开发靶点。本研究通过关注重要的遗传和分子因素,对十二种癌症亚型进行了分析。与癌症相关的两种常见基因突变是单核苷酸变异(SNV)和拷贝数改变(CNA)。癌基因由突变的原癌基因衍生而来,会破坏细胞的正常功能并促进癌症的发生,而抑癌基因通常会因突变而失活,它们能调节细胞的增殖和DNA损伤反应等过程。这项研究分析了癌症基因组图谱(TCGA)的数据集,该图谱提供了各种癌症的大量基因组数据。根据我们的分析结果,在八种癌症(BRCA、BLCA、HNSC、KIRC、LUAD、KIRP、LUSC、STAD)中发现了许多基于 Kaplan Meier 基因表达数据的具有显著 p 值的基因。此外,STAD 是唯一一种同时报告了显著 p 值和功能项的癌症。有趣的是,我们发现 LIHC 是仅有一个 CNA 突变基因且其生存图谱 p 值显著的癌症。此外,KICH 没有报告任何有意义的基因。我们的研究提出了抑癌基因和致癌基因之间的关系,并揭示了基因突变导致的癌症肿瘤发生。
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引用次数: 0
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American journal of clinical and experimental immunology
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