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Development of a monoclonal antibody against a synthetic peptide of Buthotus saulcyi scorpion venom: a novel diagnostic and neutralizing tool. 抗蝎毒合成肽单克隆抗体的研制:一种新的诊断和中和工具。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-06-15 eCollection Date: 2025-01-01 DOI: 10.62347/DLDC9587
Jamil Zargan, Hossein Delavari Noghabi, Mohammad Sadegh Odehzadeh, Abbas Hajizade

Background: Hybridoma technology is an essential method used to produce monoclonal antibodies, providing equal specificity and scalability for biomedical applications. This methodology utilizes a hybridoma formation process through fusing short-lived, antibody-producing B lymphocytes with immortalized myeloma cells, thus providing hybridoma clones that produce monoclonal antibodies that are highly specific. Monoclonal antibodies produced through hybridoma technology have a consistent and reproducibility benefits over polyclonal forms of antibodies, making monoclonal antibodies an essential product in diagnostics and therapeutics. In this study, we attempted to produce monoclonal antibodies in order to target a synthetic peptide from venom of Buthotus Saulcyi, a medically important scorpion in the family Buthidae, native to Iran, known for having potent toxicity that is most dangerous in children and the elderly.

Methods: Balb/c mice were immunized with the synthetic peptide P4 before fusion to Sp2/0-Ag14 myeloma cells using polyethylene glycol at a 5:1 ratio. Hybridoma cells were cultured in HAT selective media with a single clone isolated using limiting dilution.

Result: Cell production was confirmed with an enzyme-linked immunosorbent assay (ELISA) and determined specificity to recognize B. Saulcyi venom. Neutralization was determined using MTT and SRB cell lines HepG2 and determined the monoclonal antibody treatment for B. Saulcyi venom had efficacy.

Conclusion: These findings highlight the potential of this mAb as a diagnostic tool for rapid detection of B. Saulcyi venom in clinical settings, paving the way for improved management of scorpion envenomation.

背景:杂交瘤技术是生产单克隆抗体的重要方法,为生物医学应用提供了同等的特异性和可扩展性。该方法利用杂交瘤形成过程,通过融合短寿命,产生抗体的B淋巴细胞与永生化骨髓瘤细胞,从而提供杂交瘤克隆,产生高度特异性的单克隆抗体。通过杂交瘤技术生产的单克隆抗体比多克隆抗体具有一致性和可重复性的优点,使单克隆抗体成为诊断和治疗领域的重要产品。在这项研究中,我们试图生产单克隆抗体,以从Buthotus Saulcyi的毒液合成肽为靶点,Buthotus Saulcyi是一种原产于伊朗的医学上重要的蝎科蝎子,以对儿童和老年人最危险的强毒性而闻名。方法:用合成肽P4免疫Balb/c小鼠,然后用聚乙二醇按5:1比例与Sp2/0-Ag14骨髓瘤细胞融合。杂交瘤细胞在HAT选择性培养基中培养,用极限稀释法分离单克隆。结果:酶联免疫吸附试验(ELISA)证实了细胞的产生,并确定了识别索氏杆菌毒液的特异性。用MTT和SRB细胞株HepG2检测中和作用,确定单克隆抗体对索毒杆菌毒的治疗效果。结论:这些发现突出了该单抗作为临床快速检测B. Saulcyi毒液的诊断工具的潜力,为改进蝎子中毒的管理铺平了道路。
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引用次数: 0
Dcun1d3 is dispensable for spermatogenesis and male fertility in mice. Dcun1d3在小鼠精子发生和雄性生殖中是不可缺少的。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-06-15 eCollection Date: 2025-01-01 DOI: 10.62347/BZPE6333
Meng Liu, Wenxin Gao, Wenyi Sheng, Nianchao Zhou, Tiantian Wu, Cong Shen, Guannan Feng, Xiaoxue Xi

Background: DCUN1D3, a member of the DCNL (defective in cullin neddylation-like) protein family, has been implicated in ultraviolet (UV) radiation-induced cell cycle checkpoints, cell growth, survival, and neddylation. However, its specific function in male germ cells and potential involvement in spermatogenesis remain poorly understood.

Methods: To investigate the role of Dcun1d3 in male reproduction, we generated Dcun1d3 knockout (KO) mice. Sperm parameters were evaluated using computer-assisted sperm analysis (CASA), while histological and immunohistochemical analyses were performed to assess spermatogenesis.

Results: Dcun1d3-KO mice exhibited no significant differences in testicular histology, sperm quality, levels of germ cell apoptosis, or fertility outcomes compared to wild-type controls.

Conclusions: These findings indicate that Dcun1d3 is not essential for spermatogenesis or male fertility in mice. This study provides evidence to streamline future investigations by excluding Dcun1d3 as a critical regulator of male germ cell development and offers useful insights for human fertility gene research.

背景:DCUN1D3是DCNL (cullin类类泛素修饰缺陷蛋白)家族的一员,与紫外线(UV)辐射诱导的细胞周期检查点、细胞生长、存活和泛素修饰有关。然而,它在男性生殖细胞中的特定功能以及在精子发生中的潜在作用仍然知之甚少。方法:通过Dcun1d3基因敲除(KO)小鼠,研究Dcun1d3基因在雄性生殖中的作用。使用计算机辅助精子分析(CASA)评估精子参数,同时进行组织学和免疫组织化学分析以评估精子发生。结果:与野生型对照相比,Dcun1d3-KO小鼠在睾丸组织学、精子质量、生殖细胞凋亡水平或生育结果方面没有显着差异。结论:这些发现表明Dcun1d3对小鼠精子发生或雄性生育能力不是必需的。该研究通过排除Dcun1d3作为男性生殖细胞发育的关键调节因子,为简化未来的研究提供了证据,并为人类生育基因研究提供了有用的见解。
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引用次数: 0
Diagnostic value of CD20 combined with CD138 positive expression in patients with chronic endometritis. CD20联合CD138阳性表达对慢性子宫内膜炎的诊断价值。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-06-15 eCollection Date: 2025-01-01 DOI: 10.62347/LIHI3143
Jingyi Yi, Peiru Zhang, Lvxuan Chen, Shuqiang Chu, Luhong Li

Background: This study aims to evaluate the diagnostic value of CD138 and CD20 immunohistochemical staining in chronic endometritis (CE).

Methods: A total of 131 patients with reproductive needs, treated at the Second Affiliated Hospital of Fujian Medical University between August 2020 and July 2021, were enrolled. Patients were divided into a CD138-positive group (n=91) and a CD138-negative group (n=40). All participants provided informed consent and underwent hysteroscopic examination using an Olympus 30° scope, following standard operating procedures. Lesion shape and size were recorded in detail. CE diagnosis was based on hysteroscopic findings of patchy bleeding and confirmed by endometrial biopsy of suspicious areas. Biopsy tissues were subjected to immunohistochemical staining for CD138 and CD20. Expression levels were assessed under low-power and high-power magnification (Original magnification: ×400. Scale bar: 20 μm).

Results: CD20 expression differed significantly between the CD138-positive and CD138-negative groups (χ2=45.440.160, P<0.05). The kappa coefficient for agreement between CD20 and CD138 was 0.530 (95% CI 2.072-4.684, P<0.05). A significant difference in CD20 expression at ×400 magnification was also observed between the two groups (χ2=12.520, P<0.05), with a kappa coefficient of 0.300(95% CI 0.594-1.164, P<0.05). The area under the ROC curve (AUC) for CD20 in predicting CE was 0.732, and 0.665 for CD20 at ×400 magnification, indicating reliable diagnostic performance for both.

Conclusions: In patients with chronic endometritis, both the positive expression of CD20 and its high-level expression at ×400 magnification provide valuable diagnostic indicators, demonstrating better diagnostic utility.

背景:本研究旨在探讨CD138和CD20免疫组化染色对慢性子宫内膜炎(CE)的诊断价值。方法:选取2020年8月至2021年7月在福建医科大学第二附属医院就诊的131例有生殖需求的患者。将患者分为cd138阳性组(n=91)和cd138阴性组(n=40)。所有参与者均提供知情同意,并按照标准操作程序使用奥林巴斯30°镜进行宫腔镜检查。详细记录病变形态和大小。CE诊断基于宫腔镜发现的斑片状出血,并通过可疑区域的子宫内膜活检证实。活检组织进行CD138和CD20免疫组化染色。在低倍和高倍倍率下评估表达水平(原倍率:×400)。比例尺:20 μm)。结果:CD20在cd138阳性组和cd138阴性组的表达差异有统计学意义(χ2=45.440.160, P2=12.520, p)。结论:CD20在慢性子宫内膜炎患者中阳性表达和×400放大下的高水平表达均提供了有价值的诊断指标,具有较好的诊断价值。
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引用次数: 0
BMAL1 deficiency in macrophages exacerbates sepsis-induced inflammatory response and organ damage by regulating PGC-1α. 巨噬细胞BMAL1缺乏通过调节PGC-1α加剧败血症诱导的炎症反应和器官损伤。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-04-25 eCollection Date: 2025-01-01 DOI: 10.62347/QCMB2857
Xinjian Li, Feng Qi, Bin Yao, Yan Liu, Zhujun Yi

BMAL1 is a core gene involved in the regulation of circadian rhythm; however, its role in sepsis remains incompletely understood. In this study, we investigated the molecular mechanisms by which BMAL1 influences sepsis. Sepsis models were established both in vivo using C57BL/6J mice and in vitro using THP-1-derived macrophages. We observed a significant downregulation of BMAL1 expression in peritoneal macrophages and hepatic Kupffer cells during sepsis. Overexpression of BMAL1 in macrophages via plasmid transfection suppressed LPS-induced inflammatory responses and promoted M2 macrophage polarization. Conversely, administration of STL1267, a BMAL1 inhibitor, reduced BMAL1 expression in mice and further exacerbated systemic inflammation and multi-organ injury. Moreover, we identified PGC-1α as a key downstream effector of BMAL1. Knockdown of PGC-1α using short hairpin RNA (shRNA) abrogated BMAL1-mediated anti-inflammatory effects. Collectively, these findings uncover a novel mechanism by which BMAL1 regulates acute inflammatory responses and organ damage in sepsis, highlighting its potential as a therapeutic target.

BMAL1是参与昼夜节律调控的核心基因;然而,其在败血症中的作用仍不完全清楚。在本研究中,我们研究了BMAL1影响脓毒症的分子机制。在体内用C57BL/6J小鼠和体外用thp -1来源的巨噬细胞建立脓毒症模型。我们观察到脓毒症期间腹膜巨噬细胞和肝库普弗细胞中BMAL1的表达显著下调。质粒转染巨噬细胞过表达BMAL1可抑制lps诱导的炎症反应,促进M2巨噬细胞极化。相反,给药STL1267 (BMAL1抑制剂)会降低小鼠BMAL1的表达,并进一步加重全身炎症和多器官损伤。此外,我们发现PGC-1α是BMAL1的关键下游效应因子。使用短发夹RNA (shRNA)敲除PGC-1α可消除bmal1介导的抗炎作用。总之,这些发现揭示了BMAL1调节脓毒症急性炎症反应和器官损伤的新机制,突出了其作为治疗靶点的潜力。
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引用次数: 0
Effect of early bed cycling on muscle strength and cellular immune factors in patients with intensive care unit-acquired weaknesses - a protocol for a randomized controlled clinical trial. 早期卧床循环对重症监护病房获得性弱点患者肌肉力量和细胞免疫因子的影响——一项随机对照临床试验方案
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-04-25 eCollection Date: 2025-01-01 DOI: 10.62347/VBUR5104
Chenxia Xue, Zhouying Duan, Ruijuan Zhou, Fei Chen, Pengfei Shen, Haiyan Zhang, Hongxiang Liu, Bo Yu

In the intensive care unit (ICU), patients often experience restricted mobility due to their critical condition, potentially leading to negative effects on both muscle strength and immune function. Previous research has highlighted the beneficial effects of early mobilization among patients, regardless of mechanical ventilation status. Hence, early bed cycling serves as a potential facilitator for early mobilization and is considered a feasible intervention for critically ill patients within the ICU. To mitigate this concern, we propose a randomized controlled clinical trial aiming to assess the efficacy of early bed cycling for patients undergoing mechanical ventilation and analgosedation. The study will encompass 56 participants randomly assigned to either the treatment or control group, each consisting of 28 patients. Participants in both groups will receive health education. However, the control group will not receive any therapeutic intervention throughout the study. In contrast, the experimental group will undergo passive bed cycling of their lower extremities for 20 minutes at a rate of 30 revolutions per minute. Primary outcomes will focus on changes in the rectus femoris muscle area and thickness, evaluated using ultrasound, interleukin-6 (IL-6), IL-10, and nitric oxide (NO) production function. Secondary endpoints will encompass the modified Barthel index score, Medical Research Council total score at 1, 2, and 4 weeks following the final treatment session, participants' mechanical ventilation duration, rate of extubation in the second week, 28-day survival rate, and occurrence of adverse reactions. Any encountered side effects will be duly documented. Statistical analysis will be employed to compare patient outcomes between the treatment and control groups.

在重症监护室(ICU),由于病情危急,患者经常经历活动受限,这可能导致肌肉力量和免疫功能受到负面影响。先前的研究强调了患者早期活动的有益作用,无论机械通气状态如何。因此,早期床位循环作为早期动员的潜在促进因素,被认为是ICU重症患者的可行干预措施。为了减轻这种担忧,我们提出了一项随机对照临床试验,旨在评估早期卧床循环对机械通气和镇痛镇静患者的疗效。该研究将包括56名参与者,随机分配到治疗组或对照组,每组由28名患者组成。两组参与者都将接受健康教育。然而,在整个研究过程中,对照组将不接受任何治疗干预。相比之下,实验组将以每分钟30转的速度进行下肢被动床循环20分钟。主要结果将集中于股直肌面积和厚度的变化,通过超声、白细胞介素-6 (IL-6)、IL-10和一氧化氮(NO)产生功能进行评估。次要终点包括修改后的Barthel指数评分、最终治疗后1、2和4周的医学研究委员会总分、参与者的机械通气持续时间、第二周拔管率、28天生存率和不良反应的发生。任何遇到的副作用都将被记录在案。将采用统计分析来比较治疗组和对照组之间的患者结果。
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引用次数: 0
Hybridoma-derived monoclonal antibodies targeting a viscumin epitope: a novel approach for detection and potential therapeutic applications. 针对粘粘蛋白表位的杂交瘤衍生单克隆抗体:一种检测和潜在治疗应用的新方法。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-04-25 eCollection Date: 2025-01-01 DOI: 10.62347/DNNL4431
Jamil Zargan, Mohammad Sadegh Odeh Zadeh, Hossein Delavari Noghabi, Abbas Hajizade

Mistletoe extracts contain the ribosome inactivating protein viscumin, which exhibits effectiveness in alternative therapies but also presents considerable toxicity risks. Hence, specific and sensitive diagnostics for identifying viscumin exposure should be developed. This study aimed to develop monoclonal antibodies (mAbs) to viscumin and to test their protective capacity against its cytotoxic effects. A peptide epitope, representing A-chain of viscumin of 9 amino acids, was synthesized and conjugated to Bovine Serum Albumin (BSA) for the immunization of BALB/c mice. Spleen cells from immunized mice were fused with SP2/0 myeloma cells to obtain hybridomas. The generated mAbs for viscumin were selected through ELISA and further characterized. The cytotoxicity of mistletoe extract against Hep-G2 cells was conducted with the SRB assay, which revealed a reduction in cell viability, respectively: about 80% at 2.5 μg/mL, 64% at 5 μg/mL, and 46% at 10 μg/mL. Interestingly, it was observed that the mAbs significantly mitigated the cytotoxic activity of viscumin, causing the viability of about 86% at all tested concentrations. Hence, they showed potential for mAbs in developing sensitive diagnostic assays and therapeutic strategies to counteract the toxic effects of viscumin. Further mAb variants' characterization, epitope mapping, and determination of the affinity should be conducted to improve both diagnostic and therapeutic avenues of viscumin-induced toxicity.

槲寄生提取物含有核糖体失活蛋白粘素,它在替代疗法中显示出有效性,但也存在相当大的毒性风险。因此,应该开发特异性和敏感的诊断方法来识别粘胶素暴露。本研究旨在制备抗粘胶蛋白的单克隆抗体,并检测其抗粘胶蛋白细胞毒作用的保护能力。合成了一个代表粘粘蛋白A链9个氨基酸的肽表位,并与牛血清白蛋白(BSA)偶联,用于BALB/c小鼠的免疫。免疫小鼠脾细胞与SP2/0骨髓瘤细胞融合获得杂交瘤。通过酶联免疫吸附法(ELISA)筛选出粘胶素单克隆抗体,并对其进行进一步表征。采用SRB法测定槲寄生提取物对Hep-G2细胞的细胞毒性,结果表明,在2.5 μg/mL下,槲寄生提取物对Hep-G2细胞的活性降低约80%,在5 μg/mL下降低64%,在10 μg/mL下降低46%。有趣的是,观察到单克隆抗体显著降低了visumin的细胞毒活性,在所有测试浓度下,活性均为86%左右。因此,它们显示了单克隆抗体在开发敏感的诊断分析和治疗策略以抵消粘胶素的毒性作用方面的潜力。进一步的单克隆抗体变异的表征,表位定位和亲和力的测定应该进行,以改善诊断和治疗途径visumin诱导的毒性。
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引用次数: 0
Bioinformatics analysis of FCER1A as a key immune marker in dilated cardiomyopathy and systemic lupus erythematosus. FCER1A作为扩张型心肌病和系统性红斑狼疮关键免疫标志物的生物信息学分析。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-04-25 eCollection Date: 2025-01-01 DOI: 10.62347/KGZR5419
Li Xu, Tao Wu, Wu Zhang, Songlin Xiao

Background: Systemic lupus erythematosus (SLE) and dilated cardiomyopathy (DCM) are closely linked biologically, especially regarding immune responses. However, key biomarkers mediating the onset and development of both diseases are still lacking. This study uses bioinformatic methods to analyse the immune microenvironment of the ventricles of DCM patients and to search for biomarkers related to DCM and SLE.

Methods: Single-cell and bulk transcriptomic data for DCM were obtained from the GEO database, while GWAS data for SLE were obtained from the FinnGen database. The SMR method was used to identify genetic variants in the ventricles associated with SLE. Differential analysis was used to detect genes specific to monocyte-macrophages. Subsequently, a combination of machine learning algorithms was employed to select hub genes. Finally, small molecule drugs targeting the hub genes were retrieved from the DGIdb database.

Results: Mononuclear macrophages were found to be significantly infiltrated in dilated cardiomyopathy (DCM) samples. Seven key genes (HLA-DQB1, CD52, FCER1A, etc.) were identified by cross-tabulation analysis, of which FCER1A was the best-performing (AUC 0.8-0.9) among ten machine learning models. Validation of multiple datasets showed that FCER1A was highly expressed in the DCM group, was mainly involved in the immune cell activation pathway, and strongly interacted with other cells in the myocardial microenvironment through the MK/PROS pathway. The gene was highly expressed in the middle and late stages of monocyte-macrophage differentiation and was associated with drugs such as benzathine penicillin polylysine and omalizumab.

Conclusion: FCER1A was found to be a key differentially expressed gene in mononuclear macrophages in DCM myocardial tissue, and its significantly high expression was closely associated with immune cell activation in the myocardial microenvironment, which lays a theoretical foundation for immunotherapy of DCM and requires further clinical validation.

背景:系统性红斑狼疮(SLE)和扩张性心肌病(DCM)在生物学上密切相关,特别是在免疫反应方面。然而,介导这两种疾病发生和发展的关键生物标志物仍然缺乏。本研究采用生物信息学方法分析DCM患者脑室免疫微环境,寻找与DCM和SLE相关的生物标志物。方法:DCM的单细胞和大量转录组数据来自GEO数据库,SLE的GWAS数据来自FinnGen数据库。SMR方法用于鉴定与SLE相关的心室遗传变异。差异分析用于检测单核巨噬细胞特异性基因。随后,结合机器学习算法进行轮毂基因的选择。最后,从DGIdb数据库中检索到靶向中心基因的小分子药物。结果:扩张型心肌病(DCM)标本中单核巨噬细胞明显浸润。交叉表法分析鉴定出7个关键基因(HLA-DQB1、CD52、FCER1A等),其中FCER1A在10个机器学习模型中表现最好(AUC为0.8 ~ 0.9)。多数据集验证表明,FCER1A在DCM组中高表达,主要参与免疫细胞激活途径,并通过MK/PROS途径与心肌微环境中的其他细胞强烈相互作用。该基因在单核-巨噬细胞分化的中后期高度表达,并与苄星青霉素聚赖氨酸和奥玛珠单抗等药物有关。结论:FCER1A是DCM心肌组织单核巨噬细胞中关键的差异表达基因,其显著高表达与心肌微环境中免疫细胞活化密切相关,为DCM免疫治疗奠定了理论基础,需进一步临床验证。
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引用次数: 0
Comprehensive analysis of autophagy-related prognostic genes in breast cancer using bulk and single-cell RNA sequencing. 使用大量和单细胞RNA测序对乳腺癌自噬相关预后基因进行综合分析。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-04-25 eCollection Date: 2025-01-01 DOI: 10.62347/XPCM9169
Yong Li, Chunmei Chen, Weiwen Li, Mingtao Shao, Yan Dong, Qunchen Zhang

Objective: This study aimed to utilize single-cell RNA sequencing (scRNA-seq) to elucidate the autophagic landscape in breast cancer and to develop a prognostic model for breast cancer patients based on traditional high-throughput RNA sequencing (bulk RNA-seq).

Methods: We analyzed scRNA-seq data from the GSE75688 dataset to explore the expression patterns of autophagy-related genes (ARGs) across distinct cellular clusters. ARGs were retrieved from the GeneCards database, and bulk RNA-seq data were obtained from The Cancer Genome Atlas (TCGA). Cox proportional hazards regression was employed to construct a prognostic risk model based on ARGs. Patients were subsequently stratified into high-risk and low-risk groups according to their risk scores. For external validation, we used gene expression data from the GSE20685 and GSE48390 datasets. Receiver operating characteristic (ROC) curve analysis was performed to evaluate the performance of the 3-gene signature.

Results: Using the FindClusters function in Seurat, all cells were grouped into four distinct clusters, highlighting the intratumoral heterogeneity within the samples. Significant differences in autophagy scores were observed among the clusters. Fifteen differentially expressed autophagy-related genes were identified, and a prognostic signature consisting of three autophagy-related genes - FEZ1, STX11, and ADAMTSL1 - was developed. Based on this model, patients were classified into high- and low-risk groups, with a statistically significant difference in survival between the two groups (log-rank test, P = 0.0011). The model demonstrated robust predictive performance with an AUC of 0.761 in the external validation dataset. A nomogram incorporating the 3-gene signature and clinical factors showed strong prognostic discrimination.

Conclusion: This study uncovered significant variation in autophagy levels among different breast cancer cell clusters. Furthermore, we established a novel 3-gene autophagy-related prognostic model that effectively stratifies patient risk and provides a potential tool for personalized prognosis in breast cancer.

目的:本研究旨在利用单细胞RNA测序(scRNA-seq)来阐明乳腺癌的自噬图景,并基于传统的高通量RNA测序(bulk RNA-seq)建立乳腺癌患者的预后模型。方法:我们分析了来自GSE75688数据集的scRNA-seq数据,以探索自噬相关基因(ARGs)在不同细胞簇中的表达模式。ARGs从GeneCards数据库中检索,大量RNA-seq数据来自the Cancer Genome Atlas (TCGA)。采用Cox比例风险回归构建基于ARGs的预后风险模型。随后根据患者的风险评分将其分为高危组和低危组。为了进行外部验证,我们使用了GSE20685和GSE48390数据集的基因表达数据。采用受试者工作特征(ROC)曲线分析评价3基因标记的效果。结果:使用Seurat中的FindClusters功能,所有细胞被分为四个不同的簇,突出了样本内肿瘤内的异质性。各组自噬评分差异有统计学意义。鉴定了15个差异表达的自噬相关基因,并开发了一个由3个自噬相关基因(FEZ1、STX11和ADAMTSL1)组成的预后特征。根据该模型将患者分为高危组和低危组,两组患者的生存率差异有统计学意义(log-rank检验,P = 0.0011)。该模型在外部验证数据集中显示出稳健的预测性能,AUC为0.761。结合3基因特征和临床因素的nomogram预后鉴别图。结论:本研究揭示了不同乳腺癌细胞群中自噬水平的显著差异。此外,我们建立了一个新的3基因自噬相关的预后模型,有效地分层患者的风险,并为乳腺癌的个性化预后提供了一个潜在的工具。
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引用次数: 0
New strategy against sperm oxidative damage: supplementing NaHS to enhance the activity of the H2S antioxidant pathway mediated by E3 ubiquitin ligase ASB1. 抗精子氧化损伤新策略:补充NaHS增强E3泛素连接酶ASB1介导的H2S抗氧化途径的活性。
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-02-25 eCollection Date: 2025-01-01 DOI: 10.62347/LZHL6737
Nianchao Zhou, Mingxi Liu, Xuejun Shang
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引用次数: 0
PYGO2 as a novel prognostic biomarker and its correlation with immune infiltrates in liver cancer. PYGO2作为一种新的预后生物标志物及其与肝癌免疫浸润的相关性
IF 1.4 Q4 IMMUNOLOGY Pub Date : 2025-02-25 eCollection Date: 2025-01-01 DOI: 10.62347/RSAT7482
Jieyu Jin, Yanqiu Zhang, Jun Cao, Junchao Feng, Yuting Liang, Longwei Qiao, Bin Feng, Qingqin Tang, Jun Qiu, Zhongping Qian

Objective: The PYGO2 gene plays a significant role in various cancers. However, its prognostic significance and involvement in immune infiltration in liver cancer remain unclear. This study aimed to comprehensively evaluate PYGO2 expression and its associations with prognosis and clinicopathological features in liver cancer.

Methods: Data from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) databases were analyzed. Functional enrichment analysis and immune cell infiltration assessments were performed to explore potential pathogenic mechanisms.

Results: PYGO2 was highly expressed in multiple cancer types, including bladder urothelial carcinoma, breast invasive carcinoma, cholangiocarcinoma, diffuse large B-cell lymphoma, and liver cancer. Analysis of 50 paired liver cancer tissues from TCGA revealed significant upregulation of PYGO2 expression. Moreover, high PYGO2 expression was significantly associated with pathological T stage, overall pathological stage, tumor status, and race. Kaplan-Meier survival analysis showed that low PYGO2 expression correlated with improved overall survival (OS), disease-specific survival (DSS), and progression-free interval (PFI) in liver cancer patients. Functional enrichment analysis identified several enriched pathways, including the reactive oxygen species signaling pathway, MYC targets, interferon-alpha response, immune response regulation signaling pathway, and leukocyte migration. Additionally, PYGO2 overexpression was associated with lower proportions of cytotoxic cells, dendritic cells, immature dendritic cells, mast cells, neutrophils, plasmacytoid dendritic cell-like cells, Th17 cells, and regulatory T cells, but a higher proportion of Th2 cells. Furthermore, the high PYGO2 expression group exhibited increased immune checkpoint gene expression, particularly PDCD1.

Conclusion: PYGO2 is a promising prognostic biomarker for liver cancer, given its strong associations with clinicopathological features, survival outcomes, and immune-related characteristics.

目的:PYGO2基因在多种癌症中起重要作用。然而,其预后意义及其与肝癌免疫浸润的关系尚不清楚。本研究旨在综合评价PYGO2在肝癌中的表达及其与预后和临床病理特征的关系。方法:对肿瘤基因组图谱(TCGA)和基因型-组织表达(GTEx)数据库数据进行分析。通过功能富集分析和免疫细胞浸润评估来探索潜在的致病机制。结果:PYGO2在膀胱尿路上皮癌、乳腺浸润性癌、胆管癌、弥漫性大b细胞淋巴瘤、肝癌等多种肿瘤中均有高表达。TCGA对50对肝癌组织的分析显示PYGO2表达显著上调。此外,PYGO2高表达与病理T分期、总体病理分期、肿瘤状态和种族有显著相关性。Kaplan-Meier生存分析显示,低PYGO2表达与肝癌患者总生存期(OS)、疾病特异性生存期(DSS)和无进展间期(PFI)的改善相关。功能富集分析确定了几种富集通路,包括活性氧信号通路、MYC靶点、干扰素- α反应、免疫反应调节信号通路和白细胞迁移。此外,PYGO2过表达与细胞毒性细胞、树突状细胞、未成熟树突状细胞、肥大细胞、中性粒细胞、浆细胞样树突状细胞样细胞、Th17细胞和调节性T细胞的比例较低有关,但与Th2细胞的比例较高有关。此外,PYGO2高表达组免疫检查点基因表达增加,尤其是PDCD1。结论:PYGO2与临床病理特征、生存结果和免疫相关特征密切相关,是一种很有前景的肝癌预后生物标志物。
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American journal of clinical and experimental immunology
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