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Quantification of coronary artery Stenosis by Area Stenosis from cardiac CT angiography. 冠状动脉狭窄的CT造影定量分析。
Jiayin Zhou, Weimin Huang, Yanling Chi, Yuping Duan, Liang Zhong, Xiaodan Zhao, Junmei Zhang, Wei Xiong, Ru San Tan, Kyaw Kyar Toe
Non-invasive cardiac computed tomography angiography (CTA) is widely used to assess coronary artery stenosis and give clinical decision-making support to clinicians. The severity of stenosis lesion is commonly graded by a range of percent Diameter Stenosis (DS), which can introduce false positive diagnoses or over-estimation, triggering unnecessary further procedures. In this paper, a system and the associate methods to quantify stenosis by the percent Area Stenosis (AS) from cardiac CTA is presented. In the process, coronary artery tree is segmented and the centerline is extracted by Hessian filtering and the minimal path method. After a serial of 2D cross-sectional artery images along the artery centerline are obtained, lumen areas are segmented by ellipse-fitting with deformable models, and consequently to compute the lesion's AS. Experimental results on 5 CTA data sets show that compared to DS, AS better correlates to the reference standard for stenosis quantification, suggesting the efficacy of the proposed system.
无创心脏计算机断层血管造影(CTA)广泛用于评估冠状动脉狭窄,为临床医生提供临床决策支持。狭窄病变的严重程度通常以狭窄直径百分比(DS)来分级,这可能会导致假阳性诊断或高估,引发不必要的进一步手术。本文介绍了一种通过心脏CTA测量面积狭窄百分比(AS)来量化狭窄的系统和相关方法。在此过程中,对冠状动脉树进行分割,并采用Hessian滤波和最小路径法提取中心线。在获得一系列沿动脉中心线的二维动脉横截面图像后,使用可变形模型对管腔区域进行椭圆拟合,从而计算病变的AS。在5组CTA数据集上的实验结果表明,与DS相比,AS与狭窄量化参考标准的相关性更好,表明了所提出系统的有效性。
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引用次数: 1
A novel pseudo resistor structure for biomedical front-end amplifiers. 一种用于生物医学前端放大器的伪电阻结构。
Yu-Chieh Huang, Tzu-Sen Yang, Shun-Hsi Hsu, Xin-Zhuang Chen, Jin-Chern Chiou
This study proposes a novel pseudo resistor structure with a tunable DC bias voltage for biomedical front-end amplifiers (FEAs). In the proposed FEA, the high-pass filter composed of differential difference amplifier and a pseudo resistor is implemented. The FEA is manufactured by using a standard TSMC 0.35 μm CMOS process. In this study, three types FEAs included three different pseudo resistor are simulated, fabricated and measured for comparison and electrocorticography (ECoG) measurement, and all the results show the proposed pseudo resistor is superior to other two types in bandwidth. In chip implementation, the lower and upper cutoff frequencies of the high-pass filter with the proposed pseudo resistor are 0.15 Hz and 4.98 KHz, respectively. It also demonstrates lower total harmonic distortion performance of -58 dB at 1 kHz and higher stability with wide supply range (1.8 V and 3.3 V) and control voltage range (0.9 V and 1.65 V) than others. Moreover, the FEA with the proposed pseudo successfully recorded spike-and-wave discharges of ECoG signal in in vivo experiment on rat with pentylenetetrazol-induced seizures.
本研究提出了一种具有可调直流偏置电压的新型生物医学前端放大器伪电阻结构。在所提出的有限元分析中,实现了由差分放大器和伪电阻组成的高通滤波器。FEA采用标准的台积电0.35 μm CMOS工艺制造。在本研究中,模拟、制作和测量了三种不同的伪电阻器的三种FEAs,进行了比较和皮质电图(ECoG)测量,结果表明所提出的伪电阻器在带宽上优于其他两种类型。在芯片实现中,采用该伪电阻的高通滤波器的下截止频率为0.15 Hz,上截止频率为4.98 KHz。在1 kHz时,它的总谐波失真性能较低,为-58 dB,并且具有较宽的供电范围(1.8 V和3.3 V)和控制电压范围(0.9 V和1.65 V)。此外,在戊四唑诱发大鼠癫痫发作的体内实验中,该方法成功地记录了脑电图信号的峰波放电。
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引用次数: 2
Low-energy defibrillation with multi-electrodes stimulation: A simulation study. 多电极刺激低能除颤的模拟研究。
Lian Jin, Jianfei Wang, Biao Song, Xiaomei Wu, Zuxiang Fang
The objective of this study is to explore the possible ways to reduce defibrillation energy and further reveal the mechanism of electric defibrillation. A bidomain simulation study was performed on a rabbit whole-ventricle electrophysiological model and the feasibility of the defibrillation strategy with multi-electrodes stimulation was verified. Simulation results indicate that the new approach is effective in low-energy defibrillation.
本研究旨在探讨降低除颤能量的可能途径,进一步揭示电除颤的机制。在家兔全心室电生理模型上进行了双域模拟研究,验证了多电极刺激除颤策略的可行性。仿真结果表明,该方法在低能除颤中是有效的。
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引用次数: 0
A disposable emulsion droplet generation lab chips driven by vacuum module for manipulation of blood cells. 一种由真空模块驱动的一次性乳状液滴生成实验室芯片,用于操作血细胞。
Chia-Hung Lee, Chien-Chong Hong
This paper presents a novel disposable emulsion droplet generation lab chip driven by vacuum module for monodisperse emulsions generation and blood cell encapsulation. Emulsion droplet is a powerful tool in miniaturized analysis systems for high throughput processing. It shows great potential in chemical and biological reactions like speeding up the reaction and reducing the cost of reagents. Most research groups use syringe pumps providing positive pressure to drive the fluids. However, the long tubing connection and high cost make the microfluidic systems complicate and unsuitable for lab-on-a-chip (LOC) device. In this paper, our emulsion droplet generation lab chip with disposable vacuum module, made of shape memory polymer, provides a negative pressure to drive the fluids. This lab chip could achieve creating monodisperse emulsion droplets by manipulating two-phase microfluidic within 1 set of vacuum module and mini-heater. In the meantime, the waste is gathered into the cavity of vacuum module. This makes this lab chip safe while using biological samples. The vacuum module shows the advantages of compact, simple structure, and east-to-attach with the microfluidic device and great performance in the experiments.
本文介绍了一种由真空模块驱动的一次性乳滴生成实验室芯片,用于单分散乳滴生成和血细胞封装。乳化液液滴是小型化分析系统中实现高通量处理的有力工具。它在加快反应速度、降低试剂成本等化学和生物反应方面显示出巨大的潜力。大多数研究小组使用提供正压的注射器泵来驱动液体。然而,由于管道连接长,成本高,使得微流控系统复杂,不适合用于芯片实验室(lab-on-a-chip, LOC)设备。本文设计的乳液液滴生成实验室芯片采用一次性真空模块,由形状记忆聚合物制成,提供负压驱动流体。该实验室芯片通过控制两相微流体,在一套真空模块和微型加热器内形成单分散的乳化液液滴。同时,废料被收集到真空模块的空腔中。这使得这个实验室芯片在使用生物样本时是安全的。实验结果表明,该真空模块结构紧凑,结构简单,易于与微流控装置连接,具有良好的性能。
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引用次数: 0
Development of an excretion care support robot with human cooperative characteristics. 具有人类合作特性的排泄护理支持机器人的研制。
Yina Wang, Shuoyu Wang
To support care giving in an aging society with a shrinking population, various life support robots are being developed. In the authors' laboratory, an excretion care support robot (ECSR) with human cooperative characteristic has been developed to relieve the burden of caregivers and improve the quality of life for bedridden persons. This robot consists of a portable toilet with storage tank and a mobile robot which can run autonomously to conduct the cooperative work with others. Our research is focused on how to improve the motion accuracy and how the robot can cooperate with users. In this paper, to enable the ECSR could precisely move in the indoor environment, a proper controller is proposed considering the center of gravity shift and load changes. Then, to perform the cooperative task, two acceleration sensors are used to recognize the users' intended posture and position when moving from bed to toilet. The robot's target angle and position are determined by the user's posture. The effectiveness of the proposed method is verified by a pseudo excretion support experiment.
为了在人口减少的老龄化社会中支持护理,各种生命维持机器人正在开发中。为了减轻护理人员的负担,提高卧床病人的生活质量,本实验室开发了一种具有人类合作特征的排泄护理支持机器人(ECSR)。该机器人由一个带储罐的移动厕所和一个可以自主运行的移动机器人组成,可以与其他机器人进行协作工作。我们的研究重点是如何提高机器人的运动精度和如何与用户进行协作。为了使ECSR能够在室内环境中精确移动,本文提出了一种考虑重心移位和负载变化的控制器。然后,为了执行协同任务,使用两个加速度传感器来识别用户从床上移动到厕所时的预期姿势和位置。机器人的目标角度和位置由使用者的姿势决定。伪排泄支撑实验验证了该方法的有效性。
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引用次数: 0
X-ray microtomography of collagen and polylactide scaffolds in liquids. 液体中胶原蛋白和聚乳酸支架的x射线显微断层扫描。
M. Hannula, A. Haaparanta, Ilmari Tamminen, A. Aula, M. Kellomaki, J. Hyttinen
Methods to image and assess the microstructure of polymer based biomaterials in liquid phase, for example cell culture medium, are well warranted. X-ray microtomography could provide a mean to visualize and analyze such structures. However, the density of such polymers is close to that of water and hence the X-ray contrast is poor. Moreover, if the biomaterials contain cells and are dried, the cell morphology may be distorted. In this paper we test phosphotungstic acid (PTA) staining to improve the contrast. We imaged collagen and PLA samples with μCT in air, water and alcohol. The methods were compared visually and with contrast to noise ratio calculated from the images. Our results demonstrate that with alcohol the PLA can be imaged also in liquid phase. PTA staining seems to be a good method to increase the contrast for collagen in μCT imaging.
在液相中成像和评估聚合物基生物材料微观结构的方法,例如细胞培养基,是很有必要的。x射线显微断层扫描可以提供一种可视化和分析这些结构的方法。然而,这种聚合物的密度接近于水的密度,因此x射线对比很差。此外,如果生物材料含有细胞并将其干燥,则细胞形态可能会扭曲。本文对磷钨酸(PTA)染色进行了试验,以提高对比度。我们用μCT在空气、水和酒精中对胶原蛋白和聚乳酸进行成像。并与图像计算的噪声比进行了对比。我们的结果表明,在酒精的作用下,PLA也可以在液相中成像。在μCT成像中,PTA染色似乎是一种很好的增加胶原对比的方法。
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引用次数: 1
A multi-criteria evaluation method for assessing the defibrillation outcome of different electrode placements in swine. 一种评估猪不同电极位置除颤效果的多标准评价方法。
Dakun Lai, Pengye Li, Qi Xu
Compared with clinical and experimental approaches, numerical modeling of defibrillation offers a great opportunity to optimize the defibrillation strategy in a more individualized way. Through numerical simulation of the shock-induce electric field distribution, the outcome of a certain defibrillation shock could be predicted according to several different metrics. In this paper, we propose a novel evaluation method, in which four defibrillation criteria are assigned with separate weighting factors to quantitatively assess the efficiency of a certain defibrillation shock. Three anatomically realistic finite element models of swine were constructed for the evaluation study of 8 electrode pairs in different placements. In addition, corresponding animal experiments were performed to determine the defibrillation threshold of 8 electrode placements. Both computational and experimental results suggest that the clinical recommended anterior-lateral position is the most efficient electrode displacement for transthoracic defibrillation in swine. In conclusion, the good agreement between stimulations and experiments indicates that the present multi-criteria evaluation method would be potentially useful for optimizations of cardiac defibrillation outcome.
与临床和实验方法相比,除颤的数值模拟为以更个性化的方式优化除颤策略提供了很大的机会。通过对激电场分布的数值模拟,可以根据几种不同的指标来预测某次除颤休克的结果。在本文中,我们提出了一种新的评估方法,其中四个除颤标准被赋予单独的加权因子,定量评估某一除颤休克的效率。建立了3个解剖逼真的猪有限元模型,对8对不同放置位置的电极进行评价研究。并进行相应的动物实验,确定8个电极放置的除颤阈值。计算和实验结果均表明,临床推荐的前外侧位是猪经胸除颤最有效的电极移位。综上所述,刺激和实验之间的良好一致性表明,本多标准评估方法可能有助于心脏除颤结果的优化。
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引用次数: 0
Investigation of the performance of variable-density Z-spectrum acquisition scheme in MR chemical exchange saturation transfer effect quantification. 变密度z谱采集方案在MR化学交换饱和转移效应量化中的性能研究。
Shasha Yang, Yin Wu
Chemical exchange saturation transfer (CEST) MRI emerges as a powerful imaging method to probe chemical exchange between bulk water and labile protons. Conventional CEST imaging needs detailed Z-spectrum acquisition, even at frequencies with limited information for CEST parameter quantification, which harms imaging efficiency and is not favorable in practical applications. In this study, a variable-density Z-spectrum acquisition scheme was proposed. Data with saturation frequencies close to water, labile protons and their negative frequency offset was densely sampled, while the remaining part was sparsely acquired. The accuracy of the proposed method in CEST ratio measurement was investigated with numerical simulation. Compared to the conventionally evenly distributed Z-spectrum acquisition method, the proposed scheme showed significant improvement of CEST ratio characterization with existence of noise and static magnetic field inhomogeneity. With the additional advantage of easy implementation, the developed Z-spectrum acquisition scheme provides a useful framework for accurate CEST parameter quantification without compromising the imaging time.
化学交换饱和转移核磁共振成像(CEST)是一种探测散装水与不稳定质子之间化学交换的强大成像方法。传统的CEST成像需要详细的z谱采集,即使是在信息有限的频率下进行CEST参数量化,也会影响成像效率,不利于实际应用。本文提出了一种变密度z谱采集方案。饱和频率接近水、不稳定质子及其负频率偏移的数据被密集采样,而其余部分则被稀疏获取。通过数值模拟研究了该方法在CEST比测量中的精度。与传统的均匀分布的z谱采集方法相比,该方案在存在噪声和静磁场不均匀性的情况下显著改善了CEST比表征。由于易于实现的额外优势,开发的z谱采集方案为准确的CEST参数量化提供了有用的框架,而不会影响成像时间。
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引用次数: 0
Measuring cervical vertebra movements using kinect sensor. 使用kinect传感器测量颈椎运动。
Xiaolong Ma, Guanghua Xu, Min Li, Jun Xie, Longting Chen, Wei Pei
The incidence of cervical vertebra spondylosis is increasing with the pace of life while there is no high-efficient measurement method. This study proposed a non-contact, high-efficient, and high-precisionmethod measuring the cervical vertebra activities which obtains the cervical vertebra activities by combining the function of skeletal tracking and face tracking. A comparison study between the proposed and traditional methods has been conducted here. Statistics shows that the efficiency of the proposed measurement method at least is 6 times faster than modified square shaped goniometers that is the represent of traditional measurement, and it's angular error in average is 0.35°. Moreover, the proposed measuring method has been tested in hospital clinical environment and the results show that the proposed method can be used easily and have little interference.
随着生活节奏的加快,颈椎病的发病率越来越高,但目前尚无高效的测量方法。本研究提出了一种非接触、高效、高精度的颈椎活动测量方法,将骨骼跟踪和面部跟踪功能相结合,获得颈椎活动数据。本文对所提出的方法与传统方法进行了比较研究。统计表明,该测量方法的测量效率比传统测量方法的代表——改进的方形测角仪至少快6倍,平均角度误差为0.35°。此外,所提出的测量方法已在医院临床环境中进行了测试,结果表明该方法易于使用,干扰小。
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引用次数: 0
L0-regularized time-varying sparse inverse covariance estimation for tracking dynamic fMRI brain networks. 用于跟踪动态fMRI脑网络的l0正则化时变稀疏逆协方差估计。
Zening Fu, Sheng Han, Ao Tan, Yiheng Tu, Zhiguo Zhang
Exploration of time-varying functional brain connectivity based on functional Magnetic Resonance Imaging (fMRI) data is important for understanding dynamic brain mechanisms. l1-penalized inverse covariance is a common measure for the inference of sparse structure of functional brain networks, and it has been recently extended to estimate time-varying sparse brain networks by using a sliding window and incorporating a smoothing constraint on temporal variation. However, l1 penalty cannot induce maximum sparsity, as compared with l0 penalty, so l0 penalty is supposed to have superior quality on inverse covariance estimation. This paper introduces a novel time-varying sparse inverse covariance estimation method based on dual l0-penalties (DLP). The new DLP method estimates the sparse inverse covariance by minimizing an l0-penalized log-likelihood function and an extra l0 penalty on temporal homogeneity. A cyclic descent optimization algorithm is further developed to localize the minimum of the objective function. Experiment results on simulated signals show that the proposed DLP method can achieve better performance than conventional l1-penalized methods in estimating time-varying sparse network structures under different scenarios.
基于功能磁共振成像(fMRI)数据的时变脑功能连接探索对于理解动态脑机制具有重要意义。l1惩罚逆协方差是一种用于推断功能性脑网络稀疏结构的常用度量,最近已通过使用滑动窗口并结合时间变化的平滑约束将其扩展到估计时变稀疏脑网络。然而,与10惩罚相比,l1惩罚不能诱导出最大的稀疏度,因此10惩罚被认为在逆协方差估计上具有更好的质量。提出了一种基于对偶10 -惩罚(DLP)的时变稀疏反协方差估计方法。新的DLP方法通过最小化一个10惩罚的对数似然函数和一个额外的10惩罚的时间同质性来估计稀疏逆协方差。进一步提出了一种循环下降优化算法,用于定位目标函数的最小值。在模拟信号上的实验结果表明,在不同场景下,DLP方法在估计时变稀疏网络结构方面比传统的11惩罚方法取得了更好的性能。
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引用次数: 3
期刊
Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference
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