{"title":"Monitoring winter-seasonal acute gastroenteritis emergency department visits by age","authors":"D. Olson, I. Painter","doi":"10.3402/EHTJ.V4I0.11113","DOIUrl":"https://doi.org/10.3402/EHTJ.V4I0.11113","url":null,"abstract":"","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"5 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"75757064","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
H. Mamiya, K. Schwartzman, Aman Verma, Christian Jauvin, M. Behr, D. Buckeridge
Introduction A new TB case can be classified as: (1) a source case for transmission leading to other, secondary active TB cases; (2) a secondary case, resulting from recent transmission; or (3) an isolated case, uninvolved in recent transmission (i.e., neither source nor recipient). Source and secondary cases require more intense intervention due to their involvement in a chain of transmission; thus, accurate and rapid classification of new patients should help public health personnel to effectively prioritize control activities. However, the currently accepted method for classification, DNA fingerprint analysis, takes many weeks to produce the results (1); therefore, public health personnel often solely rely on their intuition to identify the case who is most likely to be involved in transmission. Various clinical and sociodemographic features are known to be associated with TB transmission (2). By using these readily available data at the time of diagnosis, it is possible to rapidly estimate the probabilities of the case being source, secondary and isolated.
{"title":"Aiding the practice of tuberculosis control: a decision support model to predict transmission","authors":"H. Mamiya, K. Schwartzman, Aman Verma, Christian Jauvin, M. Behr, D. Buckeridge","doi":"10.3402/EHTJ.V4I0.11066","DOIUrl":"https://doi.org/10.3402/EHTJ.V4I0.11066","url":null,"abstract":"Introduction A new TB case can be classified as: (1) a source case for transmission leading to other, secondary active TB cases; (2) a secondary case, resulting from recent transmission; or (3) an isolated case, uninvolved in recent transmission (i.e., neither source nor recipient). Source and secondary cases require more intense intervention due to their involvement in a chain of transmission; thus, accurate and rapid classification of new patients should help public health personnel to effectively prioritize control activities. However, the currently accepted method for classification, DNA fingerprint analysis, takes many weeks to produce the results (1); therefore, public health personnel often solely rely on their intuition to identify the case who is most likely to be involved in transmission. Various clinical and sociodemographic features are known to be associated with TB transmission (2). By using these readily available data at the time of diagnosis, it is possible to rapidly estimate the probabilities of the case being source, secondary and isolated.","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"13 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82525193","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
G. Johnson, Sarah L. Goff, D. Hanchett, H. Plavin, G. Birkhead
{"title":"Linking informatics and cross-programmatic public health strategic objectives","authors":"G. Johnson, Sarah L. Goff, D. Hanchett, H. Plavin, G. Birkhead","doi":"10.3402/ehtj.v4i0.11167","DOIUrl":"https://doi.org/10.3402/ehtj.v4i0.11167","url":null,"abstract":"","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"456 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82953534","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Wai-Ling Mui, B. White, Emily A Iarocci, Aimee R Reilly, Noele P. Nelson, David M. Hartley
Introduction Argus is an event-based surveillance system, which captures information from publicly available Internet media in multiple languages. The information is contextualized, and indications and warning (I&W) of disease are identified. Reports are generated by regional experts and are made available to the system’s users (1). In this study a small-scale disease event, plague emergence, was tracked in a rural setting, despite media suppression and a low availability of epidemiological information.
{"title":"Application of event-based biosurveillance to disease emergence in isolated regions","authors":"Wai-Ling Mui, B. White, Emily A Iarocci, Aimee R Reilly, Noele P. Nelson, David M. Hartley","doi":"10.3402/EHTJ.V4I0.11171","DOIUrl":"https://doi.org/10.3402/EHTJ.V4I0.11171","url":null,"abstract":"Introduction Argus is an event-based surveillance system, which captures information from publicly available Internet media in multiple languages. The information is contextualized, and indications and warning (I&W) of disease are identified. Reports are generated by regional experts and are made available to the system’s users (1). In this study a small-scale disease event, plague emergence, was tracked in a rural setting, despite media suppression and a low availability of epidemiological information.","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"13 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84799487","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Patient management system programmed alert to notify providers of suspected TB cases","authors":"R. Gamache, Shandy Dearth, S. Grannis, P. Dexter","doi":"10.3402/EHTJ.V4I0.11192","DOIUrl":"https://doi.org/10.3402/EHTJ.V4I0.11192","url":null,"abstract":"","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"34 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81036547","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
D. Travers, K. Lich, Steven J. Lippmann, A. Waller, M. Weinberger, K. Yeatts
{"title":"Defining emergency department asthma visits for public health surveillance","authors":"D. Travers, K. Lich, Steven J. Lippmann, A. Waller, M. Weinberger, K. Yeatts","doi":"10.3402/EHTJ.V4I0.11042","DOIUrl":"https://doi.org/10.3402/EHTJ.V4I0.11042","url":null,"abstract":"","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"3 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"78675825","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alessio Signorini, P. Polgreen, Alberto Maria Segre
Introduction The spread of infectious diseases is facilitated by human travel. Disease is often introduced by travelers and then spread among susceptible individuals. Likewise, uninfected susceptible travelers can move into populations sustaining the spread of an infectious disease. Several disease-modeling efforts have incorporated travel and census data in an effort to better understand the spread of disease. Unfortunately, most travel data are not fine grained enough to capture individual movements over long periods and large spaces. Alternative methods (e.g., tracking currency movements or cell phone signals) have been suggested to measure how people move with higher resolution but these are often sparse, expensive and not readily available to researchers. FourSquare is a social media application that permits users to ‘check-in’ (i.e., record their currentlocation at stores, restaurants, etc.) via their mobile telephones in exchange for incentives (e.g., location-specific coupons). FourSquare and similar applications (Gowalla, Yelp, etc.) generally broadcast each check-in via Twitter or Facebook; in addition, some GPS-enabled mobile Twitter clients add explicit geocodes to individual tweets. Here, we propose the use of geocoded social media data as a real-time fine-grained proxy for human travel.
{"title":"Inferring travel from social media","authors":"Alessio Signorini, P. Polgreen, Alberto Maria Segre","doi":"10.3402/EHTJ.V4I0.11126","DOIUrl":"https://doi.org/10.3402/EHTJ.V4I0.11126","url":null,"abstract":"Introduction The spread of infectious diseases is facilitated by human travel. Disease is often introduced by travelers and then spread among susceptible individuals. Likewise, uninfected susceptible travelers can move into populations sustaining the spread of an infectious disease. Several disease-modeling efforts have incorporated travel and census data in an effort to better understand the spread of disease. Unfortunately, most travel data are not fine grained enough to capture individual movements over long periods and large spaces. Alternative methods (e.g., tracking currency movements or cell phone signals) have been suggested to measure how people move with higher resolution but these are often sparse, expensive and not readily available to researchers. FourSquare is a social media application that permits users to ‘check-in’ (i.e., record their currentlocation at stores, restaurants, etc.) via their mobile telephones in exchange for incentives (e.g., location-specific coupons). FourSquare and similar applications (Gowalla, Yelp, etc.) generally broadcast each check-in via Twitter or Facebook; in addition, some GPS-enabled mobile Twitter clients add explicit geocodes to individual tweets. Here, we propose the use of geocoded social media data as a real-time fine-grained proxy for human travel.","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"80 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79608999","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Deborah Lee, R. Chang, K. Liske, S. Shetty, H. Burke, R. Philen, J. Painter
{"title":"U.S. destinations of newly arrived immigrants and refugees with suspect TB, 2009–2010","authors":"Deborah Lee, R. Chang, K. Liske, S. Shetty, H. Burke, R. Philen, J. Painter","doi":"10.3402/EHTJ.V4I0.11072","DOIUrl":"https://doi.org/10.3402/EHTJ.V4I0.11072","url":null,"abstract":"","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"93 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88172153","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
S. Speakman, E. McFowland, S. Somanchi, Daniel B. Neill
Introduction The spatial scan statistic (1) detects significant spatial clusters of disease by maximizing a likelihood ratio statistic F(S) over a large set of spatial regions, typically constrained by shape. The fast localized scan (2) enables scalable detection of irregular clusters by searching over proximity-constrained subsets of locations, using the linear-time subset scanning (LTSS) property to efficiently search over all subsets of each location and its k 1 nearest neighbors. However, for a fixed neighborhood size k, each of the 2 subsets are considered equally likely, and thus the fast localized scan does not take into account the spatial attributes of a subset. Hence, we wish to extend the fast localized scan by incorporating soft constraints, which give preference to spatially compact clusters while still considering all subsets within a given neighborhood.
{"title":"Scalable detection of irregular disease clusters using soft compactness constraints","authors":"S. Speakman, E. McFowland, S. Somanchi, Daniel B. Neill","doi":"10.3402/EHTJ.V4I0.11121","DOIUrl":"https://doi.org/10.3402/EHTJ.V4I0.11121","url":null,"abstract":"Introduction The spatial scan statistic (1) detects significant spatial clusters of disease by maximizing a likelihood ratio statistic F(S) over a large set of spatial regions, typically constrained by shape. The fast localized scan (2) enables scalable detection of irregular clusters by searching over proximity-constrained subsets of locations, using the linear-time subset scanning (LTSS) property to efficiently search over all subsets of each location and its k 1 nearest neighbors. However, for a fixed neighborhood size k, each of the 2 subsets are considered equally likely, and thus the fast localized scan does not take into account the spatial attributes of a subset. Hence, we wish to extend the fast localized scan by incorporating soft constraints, which give preference to spatially compact clusters while still considering all subsets within a given neighborhood.","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"69 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88528962","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A zero-inflated Poisson-based spatial scan statistic","authors":"A. Cançado, C. da-Silva, M. F. Silva","doi":"10.3402/EHTJ.V4I0.11116","DOIUrl":"https://doi.org/10.3402/EHTJ.V4I0.11116","url":null,"abstract":"","PeriodicalId":72898,"journal":{"name":"Emerging health threats journal","volume":"127 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2011-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84446179","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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