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Seroprevalence of anti-SARS-CoV-2 IgG antibodies in HIV-positive and HIV-negative patients in clinical settings in Douala, Cameroon. 喀麦隆杜阿拉临床环境中HIV阳性和HIV阴性患者抗严重急性呼吸系统综合征冠状病毒2型IgG抗体的血清流行率
Pub Date : 2023-08-14 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1212220
Sylvie Kwedi Nolna, Miriam Niba, Cedric Djadda, Palmer Masumbe Netongo

Background: The asymptomatic nature of COVID-19 coupled with differential testing are confounders in the assessment of SARS-CoV-2 incidence among people living with HIV (PLWH). As various comorbidities increase the risk of SARS-CoV-2 infection, it is crucial to assess the potential contribution of HIV to the risk of acquiring COVID-19. Our study aimed to compare the anti-SARS-CoV-2 IgG seroprevalence among people living with and without HIV.

Methods: PLWH were enrolled in the HIV units of two health facilities in Douala, Cameroon. Participants were consecutively enrolled, among which 47 were people living with HIV and 31 were HIV-negative patients. SARS-CoV-2 antibody tests were performed on all participants. Overall, medical consultation was conducted. For HIV-positive participants only, viral load, antiretroviral regimen, duration of HIV infection, and duration of antiretroviral treatment were retrieved from medical records.

Results: We found an overall SARS-CoV-2 IgG seroprevalence of 42.31% within the study population, with a SARS-CoV-2 IgG seroprevalence of 44.6% for PLWH and 38.7% among those without HIV infection; no significant statistical difference was observed. Adjusting for sex, HIV status, and BCG vaccination, the odds of previous SARS-CoV-2 infection were higher among married persons in the study population. Sex, BCG vaccination, and HIV status were not found to be associated with SARS-CoV-2 IgG seropositivity.

Conclusions: Our findings support the lack of association between HIV status and susceptibility to SARS-CoV-2 infection. The ARV regimen, suppressed viral load, and Tenofovir boasted ARV regimen might not affect the body's immune response after exposure to SARS-CoV-2 among PLWH. Thus, if HIV is well treated, the susceptibility to COVID-19 in PLWH would be like that of the general population.

新冠肺炎的无症状性质加上差异检测是评估艾滋病毒感染者(PLWH)中SARS-CoV-2发病率的混淆因素。由于各种合并症增加了感染SARS-CoV-2的风险,评估艾滋病毒对感染新冠肺炎风险的潜在贡献至关重要。我们的研究旨在比较HIV感染者和非HIV感染者的抗严重急性呼吸系统综合征冠状病毒2型IgG血清流行率。PLWH被纳入喀麦隆杜阿拉两个卫生机构的HIV单位。参与者连续入选,其中47人为艾滋病毒感染者,31人为艾滋病毒阴性患者。对所有参与者进行了严重急性呼吸系统综合征冠状病毒2型抗体测试。总体而言,进行了医疗咨询。仅对于HIV阳性参与者,从医疗记录中检索病毒载量、抗逆转录病毒疗法、HIV感染持续时间和抗逆转录病毒治疗持续时间。我们发现,在研究人群中,严重急性呼吸系统综合征冠状病毒2型IgG的总血清流行率为42.31%,PLWH的严重急性呼吸系综合征冠状病毒2-型IgG的血清流行率是44.6%,在未感染HIV的人群中是38.7%;没有观察到显著的统计学差异。经性别、HIV状况和BCG疫苗接种调整后,研究人群中已婚人群既往感染严重急性呼吸系统综合征冠状病毒2型的几率更高。性别、BCG疫苗接种和HIV状态与严重急性呼吸系统综合征冠状病毒2型IgG血清阳性无关。我们的研究结果支持HIV状态与严重急性呼吸系统综合征冠状病毒2型感染易感性之间缺乏关联。ARV方案抑制了病毒载量,而Tenofovir吹嘘ARV方案可能不会影响PLWH接触严重急性呼吸系统综合征冠状病毒2型后的身体免疫反应。因此,如果HIV得到很好的治疗,PLWH对新冠肺炎的易感性将与普通人群一样。
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引用次数: 0
Vision difficulty and dementia: economic hardships among older adults and their caregivers. 视力困难和痴呆:老年人及其照顾者的经济困难
Pub Date : 2023-08-03 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1210204
Priyanka Kumar, Grace Chung, Emmanuel Garcia-Morales, Nicholas S Reed, Orla C Sheehan, Joshua R Ehrlich, Bonnielin K Swenor, Varshini Varadaraj

Introduction: Limited research has examined the economic impact of vision difficulty (VD) and dementia on older adults and their caregivers. We aimed to determine whether older adults with VD and/or dementia, and their caregivers, face more economic hardships than their counterparts without VD or dementia.

Methods: We used cross-sectional data from the 2015 National Health and Aging Trends Study (NHATS), a population-based survey of Medicare beneficiaries, linked to their family/unpaid caregivers from the National Study of Caregiving (NSOC). Regression models characterized the association of VD (self-report), dementia (survey and cognitive assessments), and co-occurring VD and dementia with debt, receiving financial help from relatives, government-based Supplemental Nutrition Assistance Program (SNAP), other food assistance, utility assistance, and caregiver financial difficulty.

Results: The NHATS sample included 6,879 community-dwelling older adults (5670 no VD/dementia, 494 VD-alone, 512 dementia-alone, 203 co-occurring VD and dementia). Adults with VD and dementia had higher odds of receiving SNAP benefits (OR = 2.6, 95%CI = 1.4-4.8) and other food assistance (OR = 4.1, 95%CI = 1.8-9.1) than adults without VD/dementia, while no differences were noted for debt, financial help, and utility assistance. Adults with VD-alone had higher odds of debt (OR = 2.1, 95%CI = 1.3-3.2), receiving financial help (OR = 1.7, 95%CI = 1.1-2.5) and other food assistance (OR = 2.7, 95%CI = 1.7-4.3); while adults with dementia-alone had higher odds of debt (OR = 2.8, 95%CI = 1.4-5.5). The NSOC sample included 1,759 caregivers (995 caring for adults without VD/dementia, 223 for VD-alone, 368 for dementia-alone, and 173 for co-occurring VD and dementia). Compared to caregivers of older adults without VD/dementia, caregivers of adults with VD and dementia had higher odds of financial difficulty (OR = 3.0, 95%CI = 1.7-5.3) while caregivers of adults with VD-alone or dementia-alone did not.

Discussion: While older adults with VD- or dementia-alone experienced increased economic hardships, disparities in food assistance were amplified among older adults with co-occurring disease. Caregivers of adults with co-occurring disease experienced more financial difficulty than caregivers of adults with a single or no disease. This study highlights the need for interventions across clinical and social services to support the economic wellbeing of our aging population and their caregivers.

有限的研究调查了视力困难(VD)和痴呆症对老年人及其照顾者的经济影响。我们的目的是确定患有VD和/或痴呆的老年人及其照顾者是否比没有VD或痴呆的老年人面临更多的经济困难。我们使用了2015年国家健康和老龄化趋势研究(NHATS)的横断面数据,这是一项基于人口的医疗保险受益人调查,与他们的家庭/来自国家护理研究(NSOC)的无偿护理人员相关。回归模型表征了VD(自我报告)、痴呆(调查和认知评估)以及与债务、接受亲属经济援助、政府补充营养援助计划(SNAP)、其他食品援助、公用事业援助和照顾者经济困难共同发生的VD和痴呆的关联。NHATS样本包括6879名社区老年人(5670名无VD/痴呆,494名单独VD, 512名单独痴呆,203名同时发生VD和痴呆)。与没有VD/痴呆的成年人相比,患有VD和痴呆的成年人获得SNAP福利(OR = 2.6, 95%CI = 1.4-4.8)和其他食品援助(OR = 4.1, 95%CI = 1.8-9.1)的几率更高,而在债务、财务帮助和公用事业援助方面没有差异。单独使用dvd的成年人有较高的债务(OR = 2.1, 95%CI = 1.3-3.2)、接受经济援助(OR = 1.7, 95%CI = 1.1-2.5)和其他食品援助(OR = 2.7, 95%CI = 1.7 - 4.3)的几率;而单独患有痴呆症的成年人负债的几率更高(OR = 2.8, 95%CI = 1.4-5.5)。NSOC样本包括1,759名照顾者(995名照顾无VD/痴呆的成年人,223名照顾单独VD/痴呆的成年人,368名照顾单独VD/痴呆的成年人,173名照顾同时发生VD和痴呆的成年人)。与没有VD/痴呆的老年人的照顾者相比,有VD和痴呆的成年人的照顾者有更高的经济困难的几率(OR = 3.0, 95%CI = 1.7-5.3),而单独有VD或单独有痴呆的成年人的照顾者没有。虽然单独患有VD或痴呆的老年人经历了越来越多的经济困难,但在患有合并疾病的老年人中,食品援助的差异被放大了。与患有单一疾病或无疾病的成年人的照顾者相比,患有合并疾病的成年人的照顾者经历了更多的经济困难。这项研究强调了临床和社会服务干预的必要性,以支持我们老龄化人口及其护理人员的经济福祉。
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引用次数: 0
Population structure and genetic connectivity of Plasmodium falciparum in pre-elimination settings of Southern Africa. 南部非洲消灭前恶性疟原虫的种群结构和遗传连通性
Pub Date : 2023-08-01 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1227071
Hazel B Gwarinda, Sofonias K Tessema, Jaishree Raman, Bryan Greenhouse, Lyn-Marié Birkholtz

To accelerate malaria elimination in the Southern African region by 2030, it is essential to prevent cross-border malaria transmission. However, countries within the region are highly interconnected due to human migration that aids in the movement of the parasite across geographical borders. It is therefore important to better understand Plasmodium falciparum transmission dynamics in the region, and identify major parasite source and sink populations, as well as cross-border blocks of high parasite connectivity. We performed a meta-analysis using collated parasite allelic data generated by microsatellite genotyping of malaria parasites from Namibia, Eswatini, South Africa, and Mozambique (N = 5,314). The overall number of unique alleles was significantly higher (P ≤ 0.01) in Namibia (mean A = 17.3 ± 1.46) compared to South Africa (mean A = 12.2 ± 1.22) and Eswatini (mean A = 13.3 ± 1.27, P ≤ 0.05), whilst the level of heterozygosity was not significantly different between countries. The proportion of polyclonal infections was highest for Namibia (77%), and lowest for Mozambique (64%). A was significant population structure was detected between parasites from the four countries, and patterns of gene flow showed that Mozambique was the major source area and Eswatini the major sink area of parasites between the countries. This study showed strong signals of parasite population structure and genetic connectivity between malaria parasite populations across national borders. This calls for strengthening the harmonization of malaria control and elimination efforts between countries in the southern African region. This data also proves its potential utility as an additional surveillance tool for malaria surveillance on both a national and regional level for the identification of imported cases and/or outbreaks, as well as monitoring for the potential spread of anti-malarial drug resistance as countries work towards malaria elimination.

要在2030年之前加速在南部非洲区域消除疟疾,就必须防止跨界疟疾传播。然而,由于人类移徙有助于寄生虫跨越地理边界的移动,该区域内的国家高度相互关联。因此,必须更好地了解该地区恶性疟原虫的传播动态,确定主要寄生虫来源和汇种群,以及寄生虫高连通性的跨界区域。我们对来自纳米比亚、斯威士兰、南非和莫桑比克(N = 5314)的疟疾寄生虫进行了荟萃分析,收集了由微卫星基因分型产生的寄生虫等位基因数据。纳米比亚独特等位基因总数(平均A = 17.3±1.46)显著高于南非(平均A = 12.2±1.22)和斯威士兰(平均A = 13.3±1.27,P≤0.05),国家间杂合性差异不显著。纳米比亚的多克隆感染比例最高(77%),莫桑比克最低(64%)。结果表明,莫桑比克是4国间寄生虫的主要来源地,而斯威士兰是4国间寄生虫的主要汇区。该研究显示了寄生虫种群结构和跨国界疟疾寄生虫种群之间遗传连通性的强烈信号。这就要求在南部非洲区域各国之间加强协调疟疾控制和消除工作。这一数据还证明了它作为国家和区域一级疟疾监测的额外监测工具的潜在效用,以查明输入病例和/或疫情,并在各国努力消除疟疾的过程中监测抗疟疾药物耐药性的潜在传播。
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引用次数: 0
The socioeconomic context of stigma: examining the relationship between economic conditions and attitudes towards people with mental illness across European countries. 耻辱的社会经济背景:检查欧洲各国经济条件与对精神疾病患者的态度之间的关系
Pub Date : 2023-07-19 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1076188
Katie Pybus, Kate E Pickett, Charlie Lloyd, Richard Wilkinson

Introduction: Efforts to reduce the stigma associated with mental illness have intensified over the past 30 years with a particular focus on improving public attitudes. Difficult economic circumstances can be harmful to intergroup relations, but little is known about whether there is a relationship between socioeconomic conditions and attitudes towards people with mental illnesses.

Methods: Random effects logistic regression modelling was employed to explore the relationship between individual financial circumstances, contextual socioeconomic factors and difficulty speaking to a person with a significant mental illness across European countries.

Results: Lower GDP per capita and higher income inequality at the country level, alongside individual financial difficulties, were each associated with a greater likelihood of reporting difficulty speaking to a person with a significant mental illness.

Discussion: Micro and macro-economic factors are associated with public attitudes towards people with mental illness across Europe. With prolonged economic instability predicted over the coming years in Europe it is important that these findings are taken into consideration when designing mental health and social policies, in order to safeguard the progress that has been made in reducing mental health stigma to date.

在过去的30年里,减少与精神疾病相关的耻辱感的努力得到了加强,特别注重改善公众的态度。困难的经济环境可能会损害群体间的关系,但人们对社会经济条件和对精神疾病患者的态度之间是否存在关系知之甚少。随机效应逻辑回归模型被用于探索欧洲国家的个人财务状况、背景社会经济因素和与患有严重精神疾病的人交谈困难之间的关系。国家一级较低的人均国内生产总值和较高的收入不平等,加上个人的经济困难,都与报告与患有严重精神疾病的人交谈困难的可能性更大有关。微观和宏观经济因素与欧洲公众对精神病患者的态度有关。预计未来几年欧洲经济将长期不稳定,因此,在设计心理健康和社会政策时,必须考虑到这些发现,以保障迄今为止在减少心理健康污名方面取得的进展。
{"title":"The socioeconomic context of stigma: examining the relationship between economic conditions and attitudes towards people with mental illness across European countries.","authors":"Katie Pybus, Kate E Pickett, Charlie Lloyd, Richard Wilkinson","doi":"10.3389/fepid.2023.1076188","DOIUrl":"10.3389/fepid.2023.1076188","url":null,"abstract":"<p><strong>Introduction: </strong>Efforts to reduce the stigma associated with mental illness have intensified over the past 30 years with a particular focus on improving public attitudes. Difficult economic circumstances can be harmful to intergroup relations, but little is known about whether there is a relationship between socioeconomic conditions and attitudes towards people with mental illnesses.</p><p><strong>Methods: </strong>Random effects logistic regression modelling was employed to explore the relationship between individual financial circumstances, contextual socioeconomic factors and difficulty speaking to a person with a significant mental illness across European countries.</p><p><strong>Results: </strong>Lower GDP per capita and higher income inequality at the country level, alongside individual financial difficulties, were each associated with a greater likelihood of reporting difficulty speaking to a person with a significant mental illness.</p><p><strong>Discussion: </strong>Micro and macro-economic factors are associated with public attitudes towards people with mental illness across Europe. With prolonged economic instability predicted over the coming years in Europe it is important that these findings are taken into consideration when designing mental health and social policies, in order to safeguard the progress that has been made in reducing mental health stigma to date.</p>","PeriodicalId":73083,"journal":{"name":"Frontiers in epidemiology","volume":" ","pages":"1076188"},"PeriodicalIF":0.0,"publicationDate":"2023-07-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10910911/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47856913","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prevalence of chronic kidney disease and associated factors among patients with underlying chronic disease at Dessie Referral Hospital, East Amhara Region, Ethiopia. 埃塞俄比亚东阿姆哈拉地区Dessie转诊医院慢性肾病患者的患病率及相关因素
Pub Date : 2023-07-18 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1154522
Ahmed Ali, Kebadnew Mulatu, Sefineh Fenta Feleke, Gizachew Tadesse Wassie

Background: Chronic kidney disease is defined as a reduction in glomerular filtration rate below 60 ml/min per 1.73 m2 and presence of albuminuria over a period of time. Globally, 10%-15% of populations are affected by chronic kidney disease. Studies conducted in Jimma, Addis Ababa, and the Tigray region were conducted on a single chronic disease and did not include human immune viruses. In addition, there has been no such study conducted in the Amhara region. Therefore, the aim of this study was to determine the magnitude and associated factors of chronic kidney disease among chronic patients who are followed up at an outpatient department.

Methods: An institutional-based cross-sectional study of 480 chronic patients was conducted at Dessie Referral Hospital, Dessie, Ethiopia between 15 March and 16 April 2020. Data were entered into Epidata and exported to SPSS version 25 for analysis. Binary logistic regression models were performed to identify factors associated with chronic kidney disease. The variables with a p-value ≤0.25 were considered to be a candidate for multivariable logistic regression. A p-value ≤0.05 was considered a statistically significant association.

Results: The magnitude of chronic kidney disease among the study participants was 21.3%. Variables such as hypertension [adjusted odds ratio (AOR): 2.6, 95% CI: 1.58-4.27], use of non-steroidal anti-inflammatory drugs (AOR: 2.4, 95% CI: 1.41-3.97), smoking (AOR: 4.4, 95% CI: 2.65-7.34), routine physical activity (AOR: 0.6, 95% CI: 0.35-0.94), and obesity (AOR: 3.0, 95% CI: 1.76-5.05) were significantly associated with the chronic kidney disease.

Conclusion: This study found that the magnitude of chronic kidney disease in the study area was high. Hypertension, use of non-steroidal anti-inflammatory drugs, smoking, routine physical activity, and obesity were found to be significant factors for chronic kidney disease.

慢性肾脏疾病的定义是肾小球滤过率在一段时间内低于60ml /min / 1.73 m2,并且存在蛋白尿。在全球范围内,10%-15%的人口受到慢性肾脏疾病的影响。在吉马、亚的斯亚贝巴和提格雷地区进行的研究是针对一种慢性病进行的,不包括人类免疫病毒。此外,在阿姆哈拉地区也没有进行这种研究。因此,本研究的目的是确定在门诊随访的慢性患者中慢性肾脏疾病的程度和相关因素。2020年3月15日至4月16日,在埃塞俄比亚德西转诊医院对480名慢性患者进行了一项基于机构的横断面研究。数据输入Epidata,导出到SPSS 25进行分析。采用二元logistic回归模型来确定与慢性肾脏疾病相关的因素。p值≤0.25的变量被认为是多变量逻辑回归的候选变量。p值≤0.05被认为具有统计学意义。研究参与者中慢性肾脏疾病的发生率为21.3%。高血压[调整优势比(AOR): 2.6, 95% CI: 1.58-4.27]、使用非甾体抗炎药(AOR: 2.4, 95% CI: 1.41-3.97)、吸烟(AOR: 4.4, 95% CI: 2.65-7.34)、常规体育活动(AOR: 0.6, 95% CI: 0.35-0.94)和肥胖(AOR: 3.0, 95% CI: 1.76-5.05)等变量与慢性肾脏疾病显著相关。本研究发现,研究地区慢性肾脏疾病的严重程度较高。高血压、使用非甾体抗炎药、吸烟、常规体育活动和肥胖被发现是慢性肾脏疾病的重要因素。
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引用次数: 0
Undiagnosed cardiovascular risk factors including elevated lipoprotein(a) in patients with ischaemic heart disease. 缺血性心脏病患者未确诊的心血管危险因素包括脂蛋白(a)升高
Pub Date : 2023-07-17 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1207752
Fionn Chua, Audrey Lam, Ying Hui Mak, Zhong Hui Lee, Lily Mae Dacay, Jie Lin Yew, Troy Puar, Joan Khoo, Weien Chow, Vern Hsen Tan, Khim Leng Tong, Boon Wah Liew, Colin Yeo, Wann Jia Loh

Objectives: This study aims to investigate the prevalence of undiagnosed cardiovascular risk factors in patients with ischaemic heart disease (IHD).

Methods: We assessed the prevalence of previously undiagnosed cardiovascular risk factors, including elevated lipoprotein(a) [Lp(a)], among consenting patients with IHD who were admitted to hospital. Clinical information, including dietary history, from patients with newly diagnosed IHD and known IHD were compared.

Results: Of the 555 patients, 82.3% were males and 48.5% of Chinese ethnicity. Overall, 13.3% were newly diagnosed with hypertension, 14.8% with hypercholesterolemia, and 5% with type 2 diabetes (T2DM). Patients with newly diagnosed IHD, compared to those with known IHD, had a higher prevalence of new diagnoses of hypercholesterolemia (29.1% vs. 2.0%, p < 0.001), hypertension (24.5% vs. 3.4%, p < 0.001) and T2DM (7.3% vs. 3.1%, p = 0.023). Active smoking was prevalent in 28.3% of patients, and higher in newly diagnosed IHD (34.1% vs. 23.2%, p = 0.005). Elevated Lp(a) of ≥120 nmol/L was detected in 15.6% of all patients, none of whom were previously diagnosed. Dietary habits of >50% of patients in both groups did not meet national recommendations for fruits, vegetables, wholegrain and oily fish intake. However, patients with known IHD had a more regular omega-3 supplement intake (23.4% vs. 10.3%, p = 0.024).

Conclusion: Increased detection efforts is necessary to diagnose chronic metabolic diseases (hypertension, hypercholesterolemia, T2DM) especially among patients at high risk for IHD. Cardiovascular risk factors, in particular elevated Lp(a), smoking, and suboptimal dietary intake in patients with IHD deserve further attention.

本研究旨在探讨缺血性心脏病(IHD)患者未确诊的心血管危险因素的患病率。我们评估了先前未确诊的心血管危险因素的患病率,包括脂蛋白升高(a) [Lp(a)],在同意入院的IHD患者中。比较新诊断的IHD和已知IHD患者的临床信息,包括饮食史。555例患者中,男性占82.3%,华裔占48.5%。总体而言,13.3%新诊断为高血压,14.8%为高胆固醇血症,5%为2型糖尿病(T2DM)。新诊断的IHD患者与已知IHD患者相比,新诊断的高胆固醇血症患病率更高(29.1%对2.0%,两组患者中50%的患者不符合国家推荐的水果、蔬菜、全谷物和油性鱼类摄入量。然而,已知的IHD患者有更规律的omega-3补充剂摄入(23.4%比10.3%,p = 0.024)。对于慢性代谢性疾病(高血压、高胆固醇血症、2型糖尿病)的诊断,尤其是IHD高危患者,需要加大检测力度。IHD患者的心血管危险因素,特别是Lp(a)升高、吸烟和次优饮食摄入值得进一步关注。
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引用次数: 0
Mobility data shows effectiveness of control strategies for COVID-19 in remote, sparse and diffuse populations. 流动性数据显示新冠肺炎控制策略在偏远、稀疏和分散人群中的有效性
Pub Date : 2023-07-10 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1201810
Yuval Berman, Shannon D Algar, David M Walker, Michael Small

Data that is collected at the individual-level from mobile phones is typically aggregated to the population-level for privacy reasons. If we are interested in answering questions regarding the mean, or working with groups appropriately modeled by a continuum, then this data is immediately informative. However, coupling such data regarding a population to a model that requires information at the individual-level raises a number of complexities. This is the case if we aim to characterize human mobility and simulate the spatial and geographical spread of a disease by dealing in discrete, absolute numbers. In this work, we highlight the hurdles faced and outline how they can be overcome to effectively leverage the specific dataset: Google COVID-19 Aggregated Mobility Research Dataset (GAMRD). Using a case study of Western Australia, which has many sparsely populated regions with incomplete data, we firstly demonstrate how to overcome these challenges to approximate absolute flow of people around a transport network from the aggregated data. Overlaying this evolving mobility network with a compartmental model for disease that incorporated vaccination status we run simulations and draw meaningful conclusions about the spread of COVID-19 throughout the state without de-anonymizing the data. We can see that towns in the Pilbara region are highly vulnerable to an outbreak originating in Perth. Further, we show that regional restrictions on travel are not enough to stop the spread of the virus from reaching regional Western Australia. The methods explained in this paper can be therefore used to analyze disease outbreaks in similarly sparse populations. We demonstrate that using this data appropriately can be used to inform public health policies and have an impact in pandemic responses.

出于隐私原因,在个人层面从手机收集的数据通常会汇总到人群层面。如果我们有兴趣回答关于均值的问题,或者与由连续体适当建模的小组合作,那么这些数据会立即提供信息。然而,将这种关于群体的数据与需要个人层面信息的模型相结合会增加许多复杂性。如果我们的目标是描述人类的流动性,并通过处理离散的绝对数字来模拟疾病的空间和地理传播,就会出现这种情况。在这项工作中,我们强调了所面临的障碍,并概述了如何克服这些障碍,以有效利用特定的数据集:Google新冠肺炎聚合移动研究数据集(GAMRD)。通过对西澳大利亚州的案例研究,我们首先展示了如何克服这些挑战,从汇总数据中近似交通网络周围的绝对人口流量。西澳大利亚州有许多人口稀少、数据不完整的地区。在这个不断发展的流动网络上覆盖一个包含疫苗接种状态的疾病划分模型,我们进行了模拟,并在不分析数据的情况下得出了关于新冠肺炎在全州传播的有意义的结论。我们可以看到,皮尔巴拉地区的城镇极易受到源自珀斯的疫情的影响。此外,我们表明,对旅行的地区限制不足以阻止病毒传播到西澳大利亚地区。因此,本文中解释的方法可以用于分析类似稀疏人群中的疾病暴发。我们证明,适当使用这些数据可以用来为公共卫生政策提供信息,并对应对疫情产生影响。
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引用次数: 0
Feature selection and association rule learning identify risk factors of malnutrition among Ethiopian schoolchildren. 特征选择和关联规则学习确定埃塞俄比亚学童营养不良的风险因素
Pub Date : 2023-07-06 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1150619
William A Russel, Jim Perry, Claire Bonzani, Amanda Dontino, Zeleke Mekonnen, Ahmet Ay, Bineyam Taye

Introduction: Previous studies have sought to identify risk factors for malnutrition in populations of schoolchildren, depending on traditional logistic regression methods. However, holistic machine learning (ML) approaches are emerging that may provide a more comprehensive analysis of risk factors.

Methods: This study employed feature selection and association rule learning ML methods in conjunction with logistic regression on epidemiological survey data from 1,036 Ethiopian school children. Our first analysis used the entire dataset and then we reran this analysis on age, residence, and sex population subsets.

Results: Both logistic regression and ML methods identified older childhood age as a significant risk factor, while females and vaccinated individuals showed reduced odds of stunting. Our machine learning analyses provided additional insights into the data, as feature selection identified that age, school latrine cleanliness, large family size, and nail trimming habits were significant risk factors for stunting, underweight, and thinness. Association rule learning revealed an association between co-occurring hygiene and socio-economical variables with malnutrition that was otherwise missed using traditional statistical methods.

Discussion: Our analysis supports the benefit of integrating feature selection methods, association rules learning techniques, and logistic regression to identify comprehensive risk factors associated with malnutrition in young children.

以往的研究都是依靠传统的逻辑回归方法,试图确定学龄儿童营养不良的危险因素。然而,整体机器学习(ML)方法正在出现,可以提供更全面的风险因素分析。本研究采用特征选择和关联规则学习ML方法,并结合逻辑回归对来自1,036名埃塞俄比亚学龄儿童的流行病学调查数据进行分析。我们的第一次分析使用了整个数据集,然后我们对年龄、居住地和性别人口子集进行了重新分析。逻辑回归和ML方法都确定儿童年龄较大是重要的危险因素,而女性和接种疫苗的个体发育迟缓的几率降低。我们的机器学习分析为数据提供了额外的见解,因为特征选择确定了年龄、学校厕所清洁度、大家庭规模和修剪指甲的习惯是发育迟缓、体重不足和消瘦的重要风险因素。关联规则学习揭示了共同发生的卫生和社会经济变量与营养不良之间的关联,否则使用传统的统计方法会错过。我们的分析支持整合特征选择方法、关联规则学习技术和逻辑回归的好处,以确定与幼儿营养不良相关的综合危险因素。
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引用次数: 0
Sero-prevalence and factors associated with anti-Brucella antibodies in slaughter livestock in Uganda. 乌干达屠宰牲畜血清流行率及与抗布鲁氏菌抗体相关的因素
Pub Date : 2023-06-29 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1213592
James Bugeza, Kristina Roesel, Ignacio Moriyon, Denis Mugizi, Lordrick Alinaitwe, Velma Kivali, Clovice Kankya, Elizabeth Anne Jessie Cook

Introduction: Brucellosis is endemic in Uganda and is a major cause of production losses in livestock. Early detection and quantification of the disease is vital for its control and eradication. The aim of this study was to assess the sero-prevalence and factors associated with anti-Brucella antibodies in slaughtered livestock.

Materials and methods: Sera from 886 cattle, 925 small ruminants, and 900 pigs were collected from regional abattoirs in Northern, Eastern and Central Uganda. To estimate sero-prevalence, sera were serially tested using a combination of the Rose Bengal Test (RBT) and Native Hapten (NH) immunoprecipitation test. True sero-prevalence was estimated using the Rogan-Gladden estimator considering the sensitivity and specificity of the NH immunoprecipitation test. Multivariable logistic regression was used to assess factors associated with seropositivity for anti-Brucella antibodies.

Results and discussion: Small ruminants showed the highest seroprevalence (6.7%, 95% CI = 4.2-7.1) followed by cattle (3.8%, 95% CI = 2.4-4.9) and pigs (2.8%, 95% CI = 1.1-2.9). Seropositivity for anti-Brucella antibodies was associated with region of origin (OR = 4.6,95%CI=1.49-17.75, p = 0.013) for cattle; sex (OR = 2.90, 95% C = 1.5-6.34, p = 0.004), age (OR=4.04, 95% CI = 1.07-8.52, p = 0.006) and species (OR = 2.53, 95% CI = 1.08-6.98, p = 0.048) for small ruminants; and finally sex for pigs (OR = 2.88, 95% CI = 1.07-8.52, p = 0.041). Progressive control interventions must include both cattle and small ruminants since they play a bigger role in the maintenance and dissemination of Brucella. The interventions should adopt a risk-based approach with regions at higher risk being given top priority. Bacteriological and molecular studies should be undertaken to clarify the role of pigs and the goat-cattle cross infections in the epidemiological cycle of brucellosis in Uganda.

布鲁氏菌病在乌干达流行,是造成牲畜生产损失的主要原因。早期发现和量化这种疾病对于控制和根除它至关重要。本研究的目的是评估屠宰牲畜的血清流行率和与抗布鲁氏菌抗体相关的因素。材料和方法从乌干达北部、东部和中部的区域屠宰场采集886头牛、925只小反刍动物和900头猪的血清。为了估计血清流行率,使用玫瑰孟加拉测试(RBT)和天然Hapten(NH)免疫沉淀测试的组合对血清进行了连续测试。考虑到NH免疫沉淀试验的敏感性和特异性,使用Rogan-Gradden估计器估计真实血清流行率。多变量逻辑回归用于评估与抗布鲁氏菌抗体血清阳性相关的因素。结果和讨论小型反刍动物的血清流行率最高(6.7%,95%CI = 4.2-7.1),其次是牛(3.8%,95%置信区间 = 2.4-4.9)和猪(2.8%,95%置信区间 = 1.1-2.9)。抗布鲁氏菌抗体的血清阳性与来源区有关(OR = 4.6,95%CI=1.49-17.75,p = 0.013);性别(或 = 2.90,95%C = 1.5-6.34,p = 0.004),年龄(OR=4.04,95%CI = 1.07-8.52,p = 0.006)和物种(OR = 2.53,95%CI = 1.08-6.98,p = 0.048);最后是猪的性行为(OR = 2.88,95%CI = 1.07-8.52,p = 0.041)。渐进控制干预措施必须包括牛和小型反刍动物,因为它们在布鲁氏菌的维持和传播中发挥着更大的作用。干预措施应采取基于风险的方法,将风险较高的地区列为首要任务。应进行细菌学和分子研究,以阐明猪和山羊-牛交叉感染在乌干达布鲁氏菌病流行病学周期中的作用。
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引用次数: 0
Does tourism affect the long term course of COVID-19 pandemic in a country of destination? Evidence from a popular Greek island in 2020 where control measures were implemented. 旅游业是否影响目的地国新冠肺炎大流行的长期过程?2020年希腊一个受欢迎的岛屿实施控制措施的证据
Pub Date : 2023-06-28 eCollection Date: 2023-01-01 DOI: 10.3389/fepid.2023.1149706
Zacharoula Bogogiannidou, Michalis Koureas, Varvara A Mouchtouri, Katerina Dadouli, Maria A Kyritsi, Alexandros Vontas, Lemonia Anagnostopoulos, Paraskevi Mina, Alexia Matziri, Evangelia Vachtsioli, Alexandra Papagiannakis, Zacharias Archontakis, Michael Leotsinidis, Kalliopi Theodoridou, George Manios, Achilleas Gikas, Matthaios Speletas, Christos Hadjichristodoulou

Greece opened its points of entry on July 1, 2020, with specific guidelines for travellers arriving by sea, air or land. The aim of this article is to examine the effect of tourism on the long term course of the Coronavirus Disease 2019 (COVID-19) pandemic during the pre-vaccination era (June to December 2020) on the popular Greek island of Crete. To achieve this, a cross-sectional serosurvey, repeated at monthly intervals, was conducted to compare the seroprevalence in Crete with seroprevalence in the mainland of Greece. Crete welcomed nearly 2,000,000 travellers during the 2020 summer season. Left-over serum samples were collected and obtained from public and private laboratories located in Greece, including the island of Crete. These samples were tested for the presence of anti-SARS-CoV-2 IgG antibodies. A total of 55,938 samples were collected, 3,785 of which originated from Crete. In Crete, the seroprevalence ranged between 0% (June 2020) and 2.58% (December 2020), while the corresponding seroprevalence in Greece was 0.19% and 10.75%, respectively. We identified 4.16 times lower seropositivity in Crete (2.58%) in comparison with the mainland of Greece (10.75%) during December 2020. Moreover, the monthly infection fatality rate (IFR) in Crete was calculated at 0.09%, compared with 0.21% in mainland Greece for December 2020. The island of Crete presented more than four times lower seroprevalence than the mainland of Greece, despite being a highly attractive tourist destination. This evidence supports the idea that tourism may not have affected the long term course of the COVID-19 pandemic in Greece. However, due to contradicting results from previous studies, further investigation is needed.

希腊于2020年7月1日开放了入境口岸,为通过海上、空中或陆地抵达的旅客提供了具体指导方针。本文的目的是研究在受欢迎的希腊克里特岛接种疫苗前时代(2020年6月至12月),旅游业对2019冠状病毒病(COVID-19)大流行的长期进程的影响。为了实现这一目标,进行了一次横断面血清调查,每月重复一次,以比较克里特岛的血清阳性率与希腊大陆的血清阳性率。克里特岛在2020年夏季迎来了近200万游客。从希腊(包括克里特岛)的公共和私人实验室收集和获得了剩余的血清样本。检测这些样本是否存在抗sars - cov -2 IgG抗体。总共收集了55,938个样本,其中3,785个来自克里特岛。在克里特岛,血清阳性率介于0%(2020年6月)和2.58%(2020年12月)之间,而希腊相应的血清阳性率分别为0.19%和10.75%。在2020年12月,我们发现克里特岛的血清阳性率(2.58%)比希腊大陆(10.75%)低4.16倍。此外,克里特岛2020年12月的月感染病死率(IFR)为0.09%,而希腊大陆为0.21%。尽管克里特岛是一个非常有吸引力的旅游目的地,但它的血清患病率比希腊大陆低四倍多。这一证据支持了这样一种观点,即旅游业可能没有影响到希腊COVID-19大流行的长期进程。然而,由于以往的研究结果相互矛盾,需要进一步的调查。
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引用次数: 0
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Frontiers in epidemiology
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