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Outcome of the entomological monitoring for Crimean-Congo haemorrhagic fever virus in the western and southern regions of Kazakhstan in 2021-2022. 2021-2022 年哈萨克斯坦西部和南部地区克里米亚-刚果出血热病毒昆虫学监测结果。
Pub Date : 2024-08-22 eCollection Date: 2024-01-01 DOI: 10.3389/fepid.2024.1310071
T Nurmakhanov, N Tukhanova, Z Sayakova, V Sadovskaya, A Shevtsov, G Tokmurziyeva, N Turebekov

The natural foci of Crimean-Congo haemorrhagic fever (CCHF) in Kazakhstan are geographically located in the southern regions of the country (Kyzylorda, Turkestan and Zhambyl regions), where the infection of ticks with the CCHF virus predominantly reside, tick species composition and the number of vectors are monitored annually. The objective of our research was to investigate the genetic variants of the CCHF virus in the southern endemic regions, as well as to monitor the spread of the CCHF virus in the western regions of the country (Aktobe, Atyrau and Mangystau regions). In total, 974 (216 pools) ticks from the western regions and 3527 (583 pools) ticks from the southern regions collected during 2021-2022 were investigated. The presence of CCHF virus was detected by real-time reverse transcription PCR (qRT- PCR) in 1 pool out of 799 pools (0.12%) with Hyalomma scupense ticks captured in the CCHF-endemic Kyzylorda region. In the western regions, CCHF virus was not detected in ticks. The sequencing of incomplete fragments of the S, M and L segments of the CCHF virus in the detected virus was identified as genotype Asia - I. Phylogenetic analysis showed that the isolate obtained in this study is grouped with the isolate from a patient with CCHF, which we reported in 2015 (KX129738 Genbank). Our findings highlight the importance of including sequencing in the annual monitoring system for better understanding the evolution of the CCHF virus in the study areas of our country.

克里米亚-刚果出血热(CCHF)在哈萨克斯坦的自然疫源地位于该国南部地区(克孜勒奥尔达州、突厥斯坦州和占比勒州),CCHF病毒的蜱虫感染主要集中在这些地区,每年都会对蜱虫的种类组成和载体数量进行监测。我们的研究目的是调查南部流行地区的 CCHF 病毒基因变异情况,并监测 CCHF 病毒在该国西部地区(阿克托别州、阿特劳州和曼吉斯托州)的传播情况。在 2021-2022 年期间,共调查了来自西部地区的 974 只(216 池)蜱虫和来自南部地区的 3527 只(583 池)蜱虫。通过实时反转录 PCR(qRT- PCR)技术,在 CCHF 流行的克孜勒奥尔达(Kyzylorda)地区捕获的 799 个蜱池中的 1 个(0.12%)蜱池中检测到了 CCHF 病毒。在西部地区,蜱虫体内未检测到 CCHF 病毒。系统发育分析表明,本研究中获得的分离株与我们在2015年报告的来自一名CCHF患者的分离株(KX129738 Genbank)归为一类。我们的研究结果突显了将测序纳入年度监测系统的重要性,以便更好地了解我国研究地区的 CCHF 病毒演变情况。
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引用次数: 0
A landscape analysis of clinical trials and infant clinical trials in Kenya, Ethiopia, and Nigeria. 肯尼亚、埃塞俄比亚和尼日利亚的临床试验和婴儿临床试验情况分析。
Pub Date : 2024-08-15 eCollection Date: 2024-01-01 DOI: 10.3389/fepid.2024.1417419
Patrick Amboka, Daniel Kurui, Marylene Wamukoya, Julius Kirimi Sindi, Marta Vicente-Crespo

Introduction: Global inequality in clinical research capacity and service delivery can be indicated simply by the proportion of clinical trials that a country or region has registered in clinical trial registry databases. The proportion of clinical trials registered in Africa is very low at 0.02%, even though the region accounts for approximately 15% of the world's population. Despite the economic challenges in most African countries, they have shown potential for growth and change in recent years.

Methods: We conducted desk reviews on the interventional clinical trials done in Kenya, Ethiopia, and Nigeria between 2015 to May 2023. The search was done in clinical trials repositories, and journal repositories. The search focused on intervention clinical trials. Data was extracted by screening through the publications and clinical trial platforms. The data extracted from the publications included the type of clinical trial, clinical trial phase, diseases, etc. The data extracted from the reports included: challenges in conducting clinical trials, capacity-building efforts, and the impact of the clinical trial.

Results: The number of clinical trial studies identified in Kenya was 113 (28 were on infant clinical trials). The study identified 97 clinical trials in Nigeria, of which 11 studies were on infant clinical trials. In Ethiopia, there were 28 clinical trials and only five were on infant clinical trials. The landscape review also expanded to capacity and gaps in clinical trials in the three countries. The largest proportion of clinical trials carried out in Kenya was on injury, occupational disease, and poisoning, 30.5% (n = 18) and the smallest proportion was on kidney disease, neonatal disease, obstetrics, and gynecology. Most Infant clinical trials were carried out in the area of infections and infestations 33.3% (n = 7). Most of the challenges faced by clinical trials in the three countries include a lack of infrastructure, a lack of human resources, and a lack of financial resources.

Implications: There is a need to map clinical trials done by African researchers based in Africa to exclude the trials done by non-African researchers based in Africa. Opportunities for clinical trials should be supported and challenges addressed.

导言:一个国家或地区在临床试验登记数据库中登记的临床试验比例可以简单地反映出全球在临床研究能力和服务提供方面的不平等。尽管非洲人口约占世界总人口的 15%,但该地区登记的临床试验比例却非常低,仅为 0.02%。尽管大多数非洲国家面临着经济挑战,但近年来它们已显示出增长和变革的潜力:我们对 2015 年至 2023 年 5 月期间在肯尼亚、埃塞俄比亚和尼日利亚进行的介入性临床试验进行了案头回顾。我们在临床试验资料库和期刊资料库中进行了检索。搜索的重点是干预性临床试验。通过对出版物和临床试验平台进行筛选,提取数据。从出版物中提取的数据包括临床试验类型、临床试验阶段、疾病等。从报告中提取的数据包括:开展临床试验的挑战、能力建设工作以及临床试验的影响:结果:在肯尼亚确定的临床试验研究数量为 113 项(28 项为婴儿临床试验)。在尼日利亚,研究发现了 97 项临床试验,其中 11 项是婴儿临床试验。埃塞俄比亚有 28 项临床试验,其中只有 5 项是关于婴儿临床试验的。情况审查还扩展到了这三个国家的临床试验能力和差距。在肯尼亚开展的临床试验中,受伤、职业病和中毒的比例最大,占 30.5%(n = 18),肾病、新生儿疾病、产科和妇科的比例最小。大多数婴儿临床试验是在感染和侵袭领域进行的,占 33.3%(7 人)。这三个国家的临床试验面临的大多数挑战包括缺乏基础设施、人力资源和财政资源:有必要对非洲研究人员在非洲开展的临床试验进行摸底,以排除非洲以外的研究人员在非洲开展的试验。应支持临床试验的机遇并应对挑战。
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引用次数: 0
Health facility-based prevalence of typhoid fever, typhus and malaria among individuals suspected of acute febrile illnesses in Southwest Region, Ethiopia 埃塞俄比亚西南地区疑似急性发热疾病患者在医疗机构中的伤寒、斑疹伤寒和疟疾流行率
Pub Date : 2024-07-18 DOI: 10.3389/fepid.2024.1391890
Mengistu Abayneh, Mitiku Aberad, Yosef Habtemariam, Yared Alemu
Acute febrile illnesses such as typhoid fever, typhus, and malaria are still major causes of hospital admission in many parts of Ethiopia. However, there are substantial gaps in the monitoring systems, which result in a lack of knowledge about the geographic distribution and role of common pathogens, particularly in rural areas. Thus, this study was aimed at assessing the seroprevalence of typhoid fever, typhus, and malaria among suspected acute febrile patients at the MTU Teaching Hospital and Mizan-Aman Health Center, Southwest region of Ethiopia.A health facility-based cross-sectional study was carried out from July to October 2022. Blood samples were collected from a total of 384 individuals. Widal and Weilfelix direct card agglutination and tube agglutination test methods were used for the Salmonella enterica serotype Typhi (S. typhi) and Rickettsia infections. The diagnosis of malaria was made using thick and thin blood smears. Questionnaires given by interviewers were used to gather information on risk factors and other sociodemographic factors. The data was analyzed using STATA/SE 14.0.A total of 371 patients were tested for S. Typhi and Rickettsia infections using direct card agglutination and tube agglutination methods. Using the screening test, 20.5% (76/371) patients were reactive either for O or H antigens or both, of which 55.3% (42/76) were reactive by the titration test at the cutoff value ≥ 1:80. About 17.5% (65/371) were reactive to OX19 antigen by card agglutination test, and of which 58.5% (38/65) were reactive by the titration test at the cutoff value ≥ 1:80. The overall seroprevalence of S. Typhi and Rickettsia infections using combined direct card and tube agglutination techniques was 11.3% (42/371) and 10.2% (38/371), respectively. Out of 384 suspected malaria patients, 43 (11.2%) were found positive either for P. falciparum, 27 (7.03%), or P. vivax, 16 (4.2%).In this study, typhoid fever, typhus, and malaria were found among symptomatic acute febrile patients. To increase disease awareness, it is necessary to provide sustainable health education about risk factor behaviors, disease transmission, and prevention strategies. In addition, improving laboratory diagnosis services and early treatment may also lower the likelihood of potentially fatal consequences.
在埃塞俄比亚的许多地区,伤寒、斑疹伤寒和疟疾等急性发热疾病仍然是入院治疗的主要原因。然而,由于监测系统存在很大漏洞,导致人们对常见病原体的地理分布和作用缺乏了解,尤其是在农村地区。因此,本研究旨在评估埃塞俄比亚西南部地区 MTU 教学医院和 Mizan-Aman 卫生中心疑似急性发热病人中伤寒、斑疹伤寒和疟疾的血清流行率。共采集了 384 人的血样。对肠炎沙门氏菌血清型 Typhi(伤寒沙门氏菌)和立克次体感染采用了 Widal 和 Weilfelix 直接卡凝集法和试管凝集试验法。疟疾的诊断是通过血液厚涂片和薄涂片进行的。采访人员发放的调查问卷用于收集有关风险因素和其他社会人口因素的信息。采用直接卡片凝集法和试管凝集法对 371 名患者进行了伤寒杆菌和立克次体感染检测。通过筛查试验,20.5%(76/371)的患者对 O 抗原或 H 抗原或两者均有反应,其中 55.3%(42/76)的患者通过滴定试验在临界值≥1:80 时有反应。约 17.5%(65/371)的人通过卡片凝集试验对 OX19 抗原有反应,其中 58.5%(38/65)的人通过滴定试验对 OX19 抗原有反应,滴定值≥1:80。采用直接卡式凝集法和试管凝集法联合检测的伤寒杆菌和立克次体感染的总体血清阳性率分别为 11.3%(42/371)和 10.2%(38/371)。在 384 名疑似疟疾患者中,有 43 人(11.2%)对恶性疟原虫(27 人(7.03%))或间日疟原虫(16 人(4.2%))呈阳性。为了提高人们对疾病的认识,有必要就危险因素行为、疾病传播和预防策略提供可持续的健康教育。此外,改善实验室诊断服务和早期治疗也可降低潜在致命后果的可能性。
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引用次数: 0
Pitfalls in time-to-event analysis of registry data: a tutorial based on simulated and real cases. 登记数据时间到事件分析中的陷阱:基于模拟和真实案例的教程。
Pub Date : 2024-07-11 eCollection Date: 2024-01-01 DOI: 10.3389/fepid.2024.1386922
Mickaël Alligon, Nizar Mahlaoui, Olivier Bouaziz

Survival analysis (also referred to as time-to-event analysis) is the study of the time elapsed from a starting date to some event of interest. In practice, these analyses can be challenging and, if methodological errors are to be avoided, require the application of appropriate techniques. By using simulations and real-life data based on the French national registry of patients with primary immunodeficiencies (CEREDIH), we sought to highlight the basic elements that need to be handled correctly when performing the initial steps in a survival analysis. We focused on non-parametric methods to deal with right censoring, left truncation, competing risks, and recurrent events. Our simulations show that ignoring these aspects induces a bias in the results; we then explain how to analyze the data correctly in these situations using non-parametric methods. Rare disease registries are extremely valuable in medical research. We discuss the application of appropriate methods for the analysis of time-to-event from the CEREDIH registry. The objective of this tutorial article is to provide clinicians and healthcare professionals with better knowledge of the issues facing them when analyzing time-to-event data.

生存分析(也称时间到事件分析)是对从某一起始日期到某些相关事件所经过的时间进行研究。在实践中,这些分析可能具有挑战性,如果要避免方法上的错误,就需要应用适当的技术。通过使用基于法国国家原发性免疫缺陷患者登记处(CEREDIH)的模拟和真实数据,我们试图强调在进行生存分析的初始步骤时需要正确处理的基本要素。我们重点研究了处理右删减、左截断、竞争风险和复发事件的非参数方法。我们的模拟结果表明,忽略这些方面会导致结果出现偏差;然后我们解释了如何在这些情况下使用非参数方法正确分析数据。罕见病登记在医学研究中极具价值。我们将讨论如何应用适当的方法来分析 CEREDIH 登记的事件时间。这篇教程文章的目的是让临床医生和医疗保健专业人员更好地了解他们在分析时间到事件数据时所面临的问题。
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引用次数: 0
Evaluation of field epidemiology training programs: a scoping review. 实地流行病学培训项目评估:范围界定审查。
Pub Date : 2024-06-27 eCollection Date: 2024-01-01 DOI: 10.3389/fepid.2024.1376071
Mohannad Al Nsour, Ghena Khasawneh, Yousef Khader, Haitham Bashier

Objectives: Field Epidemiology Training Programs (FETPs) are competency-based training programs that play a critical role in strengthening global health security and enhancing the epidemiological capabilities of public health professionals. This scoping review examined available published literature on the evaluations of FETPs globally.

Methods: A literature review was conducted to evaluate FETPs globally. Keywords specific to the evaluation of FETPs were utilized to search the PubMed, Scopus, and Web Science databases. After applying the inclusion and exclusion criteria, 12 relevant studies from an initial pool of 60 were included in this study. Data extraction included key details, and a qualitative synthesis organized diverse findings using a narrative approach to draw appropriate conclusions and generate recommendations.

Results: The review covered findings from 12 studies covering all three FETP modalities and spanning countries in various regions. Evaluations explored gained skills, engagement in FETP activities, and improvements in field epidemiological functions. Gained skills and knowledge, engagement in FETP activities, and improvements in field epidemiological functions were evident, with specific expectations for each FETP tier. Positive outcomes were consistent across studies, revealing improvements in surveillance activities, outbreak response, data management, and other system functions.

Conclusion: This review confirmed the positive impact of FETPs on trainees and graduates, which emphasized competency enhancements across different modalities. Various strategies are recommended to improve the evaluation of FETPs. For effective evaluation, it is necessary to develop robust evaluation tools and establish standardized metrics to compare FETPs across regions or countries.

目标:野外流行病学培训计划 (FETP) 是以能力为基础的培训计划,在加强全球卫生安全和提高公共卫生专业人员的流行病学能力方面发挥着至关重要的作用。本范围界定综述研究了全球范围内已发表的有关野外流行病学培训项目评估的文献:方法:对全球范围内的 FETPs 评估进行了文献综述。利用与 FETP 评估相关的关键词在 PubMed、Scopus 和 Web Science 数据库中进行搜索。在应用纳入和排除标准后,本研究从最初的 60 项研究中筛选出 12 项相关研究。数据提取包括关键细节,定性综合采用叙事方法整理了不同的研究结果,以得出适当的结论并提出建议:审查涵盖了 12 项研究的结果,涵盖了所有三种 FETP 模式,跨越了不同地区的国家。评估探讨了获得的技能、参与 FETP 活动的情况以及实地流行病学职能的改善情况。获得的技能和知识、对 FETP 活动的参与以及实地流行病学职能的改善是显而易见的,对每一级 FETP 都有具体的期望。各项研究的积极成果是一致的,显示了监测活动、疫情应对、数据管理和其他系统功能的改善:本综述证实了 FETP 对学员和毕业生的积极影响,强调了不同模式下能力的提高。建议采取各种策略来改进对 FETPs 的评估。为了进行有效的评估,有必要开发强有力的评估工具,并建立标准化的衡量标准,以便在不同地区或国家之间对继续教育与培训项目进行比较。
{"title":"Evaluation of field epidemiology training programs: a scoping review.","authors":"Mohannad Al Nsour, Ghena Khasawneh, Yousef Khader, Haitham Bashier","doi":"10.3389/fepid.2024.1376071","DOIUrl":"10.3389/fepid.2024.1376071","url":null,"abstract":"<p><strong>Objectives: </strong>Field Epidemiology Training Programs (FETPs) are competency-based training programs that play a critical role in strengthening global health security and enhancing the epidemiological capabilities of public health professionals. This scoping review examined available published literature on the evaluations of FETPs globally.</p><p><strong>Methods: </strong>A literature review was conducted to evaluate FETPs globally. Keywords specific to the evaluation of FETPs were utilized to search the PubMed, Scopus, and Web Science databases. After applying the inclusion and exclusion criteria, 12 relevant studies from an initial pool of 60 were included in this study. Data extraction included key details, and a qualitative synthesis organized diverse findings using a narrative approach to draw appropriate conclusions and generate recommendations.</p><p><strong>Results: </strong>The review covered findings from 12 studies covering all three FETP modalities and spanning countries in various regions. Evaluations explored gained skills, engagement in FETP activities, and improvements in field epidemiological functions. Gained skills and knowledge, engagement in FETP activities, and improvements in field epidemiological functions were evident, with specific expectations for each FETP tier. Positive outcomes were consistent across studies, revealing improvements in surveillance activities, outbreak response, data management, and other system functions.</p><p><strong>Conclusion: </strong>This review confirmed the positive impact of FETPs on trainees and graduates, which emphasized competency enhancements across different modalities. Various strategies are recommended to improve the evaluation of FETPs. For effective evaluation, it is necessary to develop robust evaluation tools and establish standardized metrics to compare FETPs across regions or countries.</p>","PeriodicalId":73083,"journal":{"name":"Frontiers in epidemiology","volume":"4 ","pages":"1376071"},"PeriodicalIF":0.0,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11236720/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141592274","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prevalence and associated factors of needlestick and sharp object injuries among healthcare workers in Ethiopia: a systematic review and meta-analysis. 埃塞俄比亚医护人员针刺和锐器伤害的发生率和相关因素:系统回顾和荟萃分析。
Pub Date : 2024-06-25 eCollection Date: 2024-01-01 DOI: 10.3389/fepid.2024.1385417
Gudeta Kaweti, Tihun Feleke

Background: Needlestick and sharp object injuries affect healthcare workers. However, there are limitations in the evidence available for informed decision-making by stakeholders, as individual research shows inconsistent results. Therefore, this study aims to assess the pooled prevalence of needlestick and sharp object injuries and their associated factors.

Methods: MEDLINE/PubMed, EMBASE, Web of Science, Google Scholar, and other databases were searched from 5 September 2023 to 10 October 2023 using the following search terms: "Prevalence" OR "Burden" OR "Magnitude" AND "Associated factors" OR "related factors" OR "Risk factors" OR "determinants" OR "Predictors" AND "Needle stick Injury" OR "Sharp Injury" OR "Health care Workers" OR " Health Care Personnel" OR "Nurses" OR "Professional" AND "Ethiopia".

Results: The pooled prevalence of needle sticks and sharp objects injury was 40.5 (95% CI: 35.0, 45.9). Needle-stick (AOR, 2.3; 95% CI: 1.6, 3.3, P < 0.001], absence of routine precaution [AOR, 2.3; 95% CI: 1.1, 4.5, P < 0.01] and lack of training (AOR = 2.4; 95% CI: 1.4, 4.1, p < 0.001) had increased odds of needle-sticks and sharp objects injury.

Conclusion: Forty percent of healthcare workers in Ethiopia have experienced needlestick and sharp object injuries. The identified factors included recapping, absence of routine precautions, and lack of training.

Systematic review registration: PROSPERO, identifier (CRD42023462311).

背景:针刺伤和锐器伤影响着医护人员。然而,由于个别研究结果不一致,利益相关者在做出知情决策时可用的证据存在局限性。因此,本研究旨在评估针刺伤和锐器伤的总体发生率及其相关因素:从 2023 年 9 月 5 日至 2023 年 10 月 10 日,使用以下检索词对 MEDLINE/PubMed、EMBASE、Web of Science、Google Scholar 和其他数据库进行了检索:"流行率 "或 "负担 "或 "程度 "和 "相关因素 "或 "相关因素 "或 "风险因素 "或 "决定因素 "或 "预测因素 "和 "针刺伤 "或 "锐器伤 "或 "医护人员 "或 "医护人员 "或 "护士 "或 "专业人员 "和 "埃塞俄比亚":针刺和锐器伤的总发生率为 40.5(95% CI:35.0,45.9)。针刺(AOR,2.3;95% CI:1.6,3.3,P P P P 结论:埃塞俄比亚 40%的医护人员被针刺或锐器刺伤:埃塞俄比亚 40% 的医护人员曾遭受针刺和锐器伤害。确定的因素包括重新盖上盖子、缺乏常规预防措施和缺乏培训:系统综述注册:PROSPERO,标识符(CRD42023462311)。
{"title":"Prevalence and associated factors of needlestick and sharp object injuries among healthcare workers in Ethiopia: a systematic review and meta-analysis.","authors":"Gudeta Kaweti, Tihun Feleke","doi":"10.3389/fepid.2024.1385417","DOIUrl":"10.3389/fepid.2024.1385417","url":null,"abstract":"<p><strong>Background: </strong>Needlestick and sharp object injuries affect healthcare workers. However, there are limitations in the evidence available for informed decision-making by stakeholders, as individual research shows inconsistent results. Therefore, this study aims to assess the pooled prevalence of needlestick and sharp object injuries and their associated factors.</p><p><strong>Methods: </strong>MEDLINE/PubMed, EMBASE, Web of Science, Google Scholar, and other databases were searched from 5 September 2023 to 10 October 2023 using the following search terms: \"Prevalence\" OR \"Burden\" OR \"Magnitude\" AND \"Associated factors\" OR \"related factors\" OR \"Risk factors\" OR \"determinants\" OR \"Predictors\" AND \"Needle stick Injury\" OR \"Sharp Injury\" OR \"Health care Workers\" OR \" Health Care Personnel\" OR \"Nurses\" OR \"Professional\" AND \"Ethiopia\".</p><p><strong>Results: </strong>The pooled prevalence of needle sticks and sharp objects injury was 40.5 (95% CI: 35.0, 45.9). Needle-stick (AOR, 2.3; 95% CI: 1.6, 3.3, <i>P</i> < 0.001], absence of routine precaution [AOR, 2.3; 95% CI: 1.1, 4.5, <i>P</i> < 0.01] and lack of training (AOR = 2.4; 95% CI: 1.4, 4.1, <i>p</i> < 0.001) had increased odds of needle-sticks and sharp objects injury.</p><p><strong>Conclusion: </strong>Forty percent of healthcare workers in Ethiopia have experienced needlestick and sharp object injuries. The identified factors included recapping, absence of routine precautions, and lack of training.</p><p><strong>Systematic review registration: </strong>PROSPERO, identifier (CRD42023462311).</p>","PeriodicalId":73083,"journal":{"name":"Frontiers in epidemiology","volume":"4 ","pages":"1385417"},"PeriodicalIF":0.0,"publicationDate":"2024-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11232479/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141565313","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The disutility of compartmental model forecasts during the COVID-19 pandemic. COVID-19 大流行期间分区模型预测的不实用性。
Pub Date : 2024-06-20 eCollection Date: 2024-01-01 DOI: 10.3389/fepid.2024.1389617
Tarini Sudhakar, Ashna Bhansali, John Walkington, David Puelz

During the COVID-19 pandemic, several forecasting models were released to predict the spread of the virus along variables vital for public health policymaking. Of these, the susceptible-infected-recovered (SIR) compartmental model was the most common. In this paper, we investigated the forecasting performance of The University of Texas COVID-19 Modeling Consortium SIR model. We considered the following daily outcomes: hospitalizations, ICU patients, and deaths. We evaluated the overall forecasting performance, highlighted some stark forecast biases, and considered forecast errors conditional on different pandemic regimes. We found that this model tends to overforecast over the longer horizons and when there is a surge in viral spread. We bolstered these findings by linking them to faults with the SIR framework itself.

在 COVID-19 大流行期间,发布了多个预测模型,根据对公共卫生决策至关重要的变量来预测病毒的传播。其中,最常见的是易感-感染-康复(SIR)分区模型。在本文中,我们研究了得克萨斯大学 COVID-19 建模联盟 SIR 模型的预测性能。我们考虑了以下日常结果:住院、重症监护室患者和死亡。我们评估了整体预测性能,强调了一些明显的预测偏差,并考虑了不同大流行机制下的预测误差。我们发现,在较长的时间跨度内以及病毒传播量激增时,该模型往往会预测过度。我们将这些发现与 SIR 框架本身的缺陷联系起来,从而加强了这些发现。
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引用次数: 0
Oil and gas development exposure and atrial fibrillation exacerbation: a retrospective study of atrial fibrillation exacerbation using Colorado's all payer claims dataset. 石油和天然气开发暴露与心房颤动加重:利用科罗拉多州所有支付方索赔数据集对心房颤动加重进行的回顾性研究。
Pub Date : 2024-06-19 eCollection Date: 2024-01-01 DOI: 10.3389/fepid.2024.1379271
Lisa M McKenzie, William B Allshouse, Barbara Abrahams, Christine Tompkins

Introduction: Emerging risk factors for atrial fibrillation (AF) incidence and episodes (exacerbation), the most common and clinically significant cardiac arrhythmia, include air and noise pollution, both of which are emitted during oil and natural gas (O&G) well site development.

Methods: We evaluated AF exacerbation risk and proximity to O&G well site development by employing a novel data source and interrupted time-series design. We retrospectively followed 1,197 AF patients living within 1-mile of an O&G well site (at-risk of exposure) and 9,764 patients living >2 miles from any O&G well site (unexposed) for AF claims in Colorado's All Payer Claims Dataset before, during, and after O&G well site development. We calculated AF exacerbation risk with multi-failure survival analysis.

Results: The analysis of the total study population does not provide strong evidence of an association between AF exacerbation and proximity to O&G wells sites during (HR = 1.07, 95% CI: 0.94, 1.22) or after (HR = 1.01, 95% CI: 0.88, 1.16) development. However, AF exacerbation risk differed by patient age and sex. In patients >80 years living within 0.39 miles (2,059 feet) of O&G well site development, AF exacerbation risk increased by 83% (HR = 1.83, 95% CI: 1.25, 2.66) and emergency room visits for an AF event doubled (HR = 2.55, 95% CI: 1.50, 4.36) during development, with risk increasing with proximity. In female patients living within 0.39 miles of O&G well site development, AF exacerbation risk increased by 56% percent (95% CI: 1.13, 2.15) during development. AF exacerbation risk did not persist past the well development period. We did not observe increased AF exacerbation risk in younger or male patients.

Discussion: The prospect that proximity to O&G well site development, a significant noise and air pollution source, may increase AF exacerbation risk in older and female AF patients requires attention. These findings support appropriate patient education to help mitigate risk and development of mitigation strategies and regulations to protect the health of populations in O&G development regions.

导言:心房颤动是临床上最常见、最严重的心律失常,其发病和发作(加重)的新风险因素包括空气和噪声污染,而这两种污染都是在石油和天然气(O&G)井场开发过程中排放的:我们采用新颖的数据源和间断时间序列设计,评估了房颤恶化风险和邻近石油与天然气(O&G)井场开发的情况。我们对科罗拉多州所有支付者索赔数据集中的 1,197 名心房颤动患者和 9,764 名心房颤动患者进行了回顾性随访,前者居住在距离石油和天然气井场 1 英里范围内(有暴露风险),后者居住在距离任何石油和天然气井场 >2 英里范围内(未暴露),并在石油和天然气井场开发之前、期间和之后进行了心房颤动索赔。我们通过多失败生存分析计算了房颤恶化风险:对全部研究人群的分析并未提供有力证据证明房颤恶化与开发期间(HR = 1.07,95% CI:0.94, 1.22)或开发之后(HR = 1.01,95% CI:0.88, 1.16)邻近油气井地点之间存在关联。然而,房颤恶化的风险因患者的年龄和性别而异。对于年龄大于 80 岁、居住在距离油气井开发项目 0.39 英里(2,059 英尺)范围内的患者,心房颤动恶化风险在开发期间增加了 83%(HR = 1.83,95% CI:1.25, 2.66),因心房颤动事件前往急诊室就诊的人数增加了一倍(HR = 2.55,95% CI:1.50, 4.36),风险随距离的远近而增加。对于居住在距离油气井开发地 0.39 英里范围内的女性患者,开发期间房颤恶化风险增加了 56% (95% CI: 1.13, 2.15)。心房颤动恶化风险在油井开发期间并未持续。我们没有发现年轻或男性患者的房颤恶化风险增加:讨论:邻近油气井开发(一个重要的噪音和空气污染源)可能会增加老年和女性房颤患者房颤恶化的风险,这一前景需要引起重视。这些发现支持对患者进行适当的教育,以帮助降低风险,并制定缓解策略和法规,以保护石油和天然气开发地区居民的健康。
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引用次数: 0
Multiple sclerosis in Central America and Caribbean countries: frequency and clinical characterization of an emergent disease. 中美洲和加勒比国家的多发性硬化症:一种新兴疾病的发病率和临床特征。
Pub Date : 2024-06-17 eCollection Date: 2024-01-01 DOI: 10.3389/fepid.2024.1368675
Fernando Gracia, Deyanira A Ramírez Navarro, Nicia E Ramírez Sánchez, Roberto Weiser, Alexander Parajeles-Vindas, Ligia I Portillo Rivera, Ericka López Torres, Luis A García Valle, Alfredo Sanabria-Castro, César Abdón López, Pahola Araujo, Maria J Ayerdis Zamora, Andrea Balmaceda-Meza, Aron Benzadon Cohen, Awilda Candelario Cueto, Diego Castillo, Romy Castro-Escobar, Karla Z Corea Urbina, Anyeri de Peña Rivas, Octavio Duarte Sotelo, Temís Enamorado Claros, José L Giroud Benítez, Karla Gracia, Mario Larreategui, Jorge A Martínez Cerrato, Josmarlin P Medina Báez, Carlos E Menjivar Samayoa, Gustavo Miranda-Loria, Priscilla Monterrey-Alvarez, Lilliam A Morales Arguello, Michelle Ortiz, Carlos D Pérez Baldioceda, Lizeth Pinilla Aguilar, Luis C Rodríguez Salinas, Virginia Rodríguez-Moreno, Sebastián Rojas-Chaves, Norbel Román-Garita, Biany Santos Pujols, Carlos Valderrama, Ivonne Van Sijtveld, Indhira Zabala Angeles, Victor M Rivera, Blas Armien

Background: Multiple Sclerosis (MS) is a common neurological disease among white populations of European origin. Frequencies among Latin Americans continue to be studied, however, epidemiologic, and clinical characterization studies lack from Central American and Caribbean countries. Ethnicity in these countries is uniformly similar with a prevalent Mestizo population.

Methods and results: Data from January 2014 to December 2019 from Guatemala, El Salvador, Honduras, Nicaragua, Costa Rica, Panama, Dominican Republic, and Aruba on demographic, clinical, MRI and phenotypic traits were determined in coordinated studies: ENHANCE, a population-based, retrospective, observational study on incidence and clinical characteristics, and from the subgroup with MS national registries (Aruba, Dominican Republic, Honduras, and Panama), data on prevalence, phenotypes and demographics. Expanded Disability Status Scale (EDSS), and therapeutic schemes were included. ENHANCE data from 758 patients disclosed 79.8% of Mestizo ethnicity; 72.4% female; median age at onset 31.0 years and 33.2 at diagnosis. The highest incidence rate was from Aruba, 2.3-3.5 × 100,000 inhabitants, and the lowest, 0.07-0.15 × 100,000, from Honduras. Crude prevalence rates per 100,000 inhabitants fluctuated from 27.3 (Aruba) to 1.0 (Honduras). Relapsing MS accounted for 87.4% of cases; EDSS <3.0 determined in 66.6% (mean disease duration: 9.1 years, SD ± 5.0); CSF oligoclonal bands 85.7%, and 87% of subjects hydroxyvitamin D deficient. Common initial therapies were interferon and fingolimod. Switching from interferon to fingolimod was the most common escalation step. The COVID-19 pandemic affected follow-up aspects of these studies.

Conclusion: This is the first study providing data on frequencies and clinical characteristics from 8 countries from the Central American and Caribbean region, addressing MS as an emergent epidemiologic disorder. More studies from these areas are encouraged.

背景:多发性硬化症(MS多发性硬化症(MS)是欧洲裔白人中常见的神经系统疾病。然而,中美洲和加勒比海国家缺乏流行病学和临床特征研究。这些国家的人种与梅斯蒂索人(Mestizo)十分相似:通过协调研究确定了危地马拉、萨尔瓦多、洪都拉斯、尼加拉瓜、哥斯达黎加、巴拿马、多米尼加共和国和阿鲁巴在 2014 年 1 月至 2019 年 12 月期间的人口统计学、临床、核磁共振成像和表型特征数据:ENHANCE是一项关于发病率和临床特征的基于人群的回顾性观察研究,来自多发性硬化症国家登记处的亚组(阿鲁巴、多米尼加共和国、洪都拉斯和巴拿马)则提供了关于发病率、表型和人口统计学的数据。研究还包括扩展残疾状况量表(EDSS)和治疗方案。来自 758 名患者的 ENHANCE 数据显示,79.8% 的患者为混血儿;72.4% 为女性;发病时的中位年龄为 31.0 岁,确诊时的中位年龄为 33.2 岁。阿鲁巴岛的发病率最高,为 2.3-3.5 × 100,000 人,洪都拉斯的发病率最低,为 0.07-0.15 × 100,000 人。每 10 万居民的粗发病率从 27.3(阿鲁巴)到 1.0(洪都拉斯)不等。复发性多发性硬化症占病例总数的 87.4%;EDSS 结论:这是第一项提供中美洲和加勒比海地区 8 个国家多发性硬化症发病率和临床特征数据的研究,将多发性硬化症视为一种新出现的流行病。我们鼓励在这些地区开展更多研究。
{"title":"Multiple sclerosis in Central America and Caribbean countries: frequency and clinical characterization of an emergent disease.","authors":"Fernando Gracia, Deyanira A Ramírez Navarro, Nicia E Ramírez Sánchez, Roberto Weiser, Alexander Parajeles-Vindas, Ligia I Portillo Rivera, Ericka López Torres, Luis A García Valle, Alfredo Sanabria-Castro, César Abdón López, Pahola Araujo, Maria J Ayerdis Zamora, Andrea Balmaceda-Meza, Aron Benzadon Cohen, Awilda Candelario Cueto, Diego Castillo, Romy Castro-Escobar, Karla Z Corea Urbina, Anyeri de Peña Rivas, Octavio Duarte Sotelo, Temís Enamorado Claros, José L Giroud Benítez, Karla Gracia, Mario Larreategui, Jorge A Martínez Cerrato, Josmarlin P Medina Báez, Carlos E Menjivar Samayoa, Gustavo Miranda-Loria, Priscilla Monterrey-Alvarez, Lilliam A Morales Arguello, Michelle Ortiz, Carlos D Pérez Baldioceda, Lizeth Pinilla Aguilar, Luis C Rodríguez Salinas, Virginia Rodríguez-Moreno, Sebastián Rojas-Chaves, Norbel Román-Garita, Biany Santos Pujols, Carlos Valderrama, Ivonne Van Sijtveld, Indhira Zabala Angeles, Victor M Rivera, Blas Armien","doi":"10.3389/fepid.2024.1368675","DOIUrl":"10.3389/fepid.2024.1368675","url":null,"abstract":"<p><strong>Background: </strong>Multiple Sclerosis (MS) is a common neurological disease among white populations of European origin. Frequencies among Latin Americans continue to be studied, however, epidemiologic, and clinical characterization studies lack from Central American and Caribbean countries. Ethnicity in these countries is uniformly similar with a prevalent Mestizo population.</p><p><strong>Methods and results: </strong>Data from January 2014 to December 2019 from Guatemala, El Salvador, Honduras, Nicaragua, Costa Rica, Panama, Dominican Republic, and Aruba on demographic, clinical, MRI and phenotypic traits were determined in coordinated studies: ENHANCE, a population-based, retrospective, observational study on incidence and clinical characteristics, and from the subgroup with MS national registries (Aruba, Dominican Republic, Honduras, and Panama), data on prevalence, phenotypes and demographics. Expanded Disability Status Scale (EDSS), and therapeutic schemes were included. ENHANCE data from 758 patients disclosed 79.8% of Mestizo ethnicity; 72.4% female; median age at onset 31.0 years and 33.2 at diagnosis. The highest incidence rate was from Aruba, 2.3-3.5 × 100,000 inhabitants, and the lowest, 0.07-0.15 × 100,000, from Honduras. Crude prevalence rates per 100,000 inhabitants fluctuated from 27.3 (Aruba) to 1.0 (Honduras). Relapsing MS accounted for 87.4% of cases; EDSS <3.0 determined in 66.6% (mean disease duration: 9.1 years, SD ± 5.0); CSF oligoclonal bands 85.7%, and 87% of subjects hydroxyvitamin D deficient. Common initial therapies were interferon and fingolimod. Switching from interferon to fingolimod was the most common escalation step. The COVID-19 pandemic affected follow-up aspects of these studies.</p><p><strong>Conclusion: </strong>This is the first study providing data on frequencies and clinical characteristics from 8 countries from the Central American and Caribbean region, addressing MS as an emergent epidemiologic disorder. More studies from these areas are encouraged.</p>","PeriodicalId":73083,"journal":{"name":"Frontiers in epidemiology","volume":"4 ","pages":"1368675"},"PeriodicalIF":0.0,"publicationDate":"2024-06-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11216161/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141478092","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of cholera surveillance systems in Africa: a systematic review 非洲霍乱监测系统评估:系统性审查
Pub Date : 2024-06-12 DOI: 10.3389/fepid.2024.1353826
Kyeng Mercy, Ganesh Pokhariyal, Noah Takah Fongwen, Lucy Kivuti-Bitok
Despite several interventions on the control of cholera, it still remains a significant public health problem in Africa. According to the World Health Organization, 251,549 cases and 4,180 deaths (CFR: 2.9%) were reported from 19 African countries in 2023. Tools exist to enhance the surveillance of cholera but there is limited evidence on their deployment and application. There is limited evidence on the harmonization of the deployment of tools for the evaluation of cholera surveillance. We systematically reviewed available literature on the deployment of these tools in the evaluation of surveillance systems in Africa.Three electronic databases (PubMed, Medline and Embase) were used to search articles published in English between January 2012 to May 2023. Grey literature was also searched using Google and Google Scholar. Only articles that addressed a framework used in cholera surveillance in Africa were included. The quality of articles was assessed using the appropriate tools. Data on the use of surveillance tools and frameworks were extracted from articles for a coherent synthesis on their deployment.A total of 13 records (5 frameworks and 8 studies) were fit for use for this study. As per the time of the study, there were no surveillance frameworks specific for the evaluation of surveillance systems of cholera in Africa, however, five frameworks for communicable diseases and public health events could be adapted for cholera surveillance evaluation. None (0%) of the studies evaluated capacities on cross border surveillance, multisectoral one health approach and linkage of laboratory networks to surveillance systems. All (100%) studies assessed surveillance attributes even though there was no synergy in the attributes considered even among studies with similar objectives. There is therefore the need for stakeholders to harmoniously identify a spectrum of critical parameters and attributes to guide the assessment of cholera surveillance system performance.
尽管在控制霍乱方面采取了多项干预措施,但霍乱仍然是非洲的一个重大公共卫生问题。根据世界卫生组织的数据,2023 年,19 个非洲国家报告了 251549 例霍乱病例和 4180 例死亡病例(病死率:2.9%)。目前已有加强霍乱监测的工具,但有关其部署和应用的证据有限。关于统一部署霍乱监测评估工具的证据也很有限。我们系统地回顾了有关在非洲监测系统评估中部署这些工具的现有文献。我们使用三个电子数据库(PubMed、Medline 和 Embase)检索了 2012 年 1 月至 2023 年 5 月间发表的英文文章。此外,还使用谷歌和谷歌学术搜索灰色文献。只有涉及非洲霍乱监测框架的文章才被收录。文章的质量使用适当的工具进行评估。从文章中提取了有关使用监测工具和框架的数据,以便对这些工具和框架的部署情况进行连贯的综合分析。共有 13 条记录(5 个框架和 8 项研究)适合用于本研究。在研究期间,还没有专门用于评估非洲霍乱监测系统的监测框架,但有 5 个用于传染病和公共卫生事件的框架可用于霍乱监测评估。没有一项研究(0%)评估了跨境监测能力、多部门统一卫生方法以及实验室网络与监测系统的联系。所有研究(100%)都对监测属性进行了评估,但即使在目标相似的研究中,所考虑的属性也没有协同作用。因此,利益相关者需要协调确定一系列关键参数和属性,以指导霍乱监测系统性能的评估。
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引用次数: 0
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Frontiers in epidemiology
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