Pub Date : 2009-10-24DOI: 10.1109/NSSMIC.2009.5401929
William C J Hunter, Robert L Harrison, Steven B Gillispie, Lawrence R Macdonald, Thomas K Lewellen
We are conducting a two-phase study, which aims to select design parameters of a long-axis positron emission tomography (PET) scanner that are a compromise between detection performance and cost. In this first phase, we examine the effects of axial length, detector thickness and collimator geometry on the noise equivalent count rate per axial length (λNEC) and noise equivalent count rate per slice (dNEC). We use these metrics as approximate, but quickly computed, indicators of a PET-scanner's performance at a detection task. From this first phase, we select a subset of scanner designs for which we can conduct a detailed study of tumor detectability and quantitation accuracy in whole-body PET imaging.
{"title":"Parametric Design Study of a Long Axial Field-of-View PET Scanner using a Block-Detector Tomograph Simulation of a Cylindrical Phantom.","authors":"William C J Hunter, Robert L Harrison, Steven B Gillispie, Lawrence R Macdonald, Thomas K Lewellen","doi":"10.1109/NSSMIC.2009.5401929","DOIUrl":"https://doi.org/10.1109/NSSMIC.2009.5401929","url":null,"abstract":"<p><p>We are conducting a two-phase study, which aims to select design parameters of a long-axis positron emission tomography (PET) scanner that are a compromise between detection performance and cost. In this first phase, we examine the effects of axial length, detector thickness and collimator geometry on the noise equivalent count rate per axial length (λNEC) and noise equivalent count rate per slice (dNEC). We use these metrics as approximate, but quickly computed, indicators of a PET-scanner's performance at a detection task. From this first phase, we select a subset of scanner designs for which we can conduct a detailed study of tumor detectability and quantitation accuracy in whole-body PET imaging.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":"2009 ","pages":"3900-3903"},"PeriodicalIF":0.0,"publicationDate":"2009-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/NSSMIC.2009.5401929","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"29203659","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2009-10-24DOI: 10.1109/nssmic.2009.5401574
Shan Tong, Adam M Alessio, Paul E Kinahan
The addition of accurate system modeling in PET image reconstruction results in images with distinct noise texture and characteristics. In particular, the incorporation of point spread functions (PSF) into the system model has been shown to visually reduce image noise, but the noise properties have not been thoroughly studied. This work offers a systematic evaluation of noise and signal properties in different combinations of reconstruction methods and parameters. We evaluate two fully-3D PET reconstruction algorithms: (1) OSEM with exact scanner line of response modeled (OSEM+LOR), (2) OSEM with line of response and a measured point spread function incorporated (OSEM+LOR+PSF), in combination with the effects of 4 post filtering parameters and 1-10 iterations. We used a modified NEMA IQ phantom, which was filled with 68Ge and consisted of 6 hot spheres of different sizes with a target/background ratio of 4:1. The phantom was scanned 50 times in 3D mode on a clinical system to provide independent noise realizations. Data were reconstructed with OSEM+LOR and OSEM+LOR+PSF using different reconstruction parameters. With access to multiple realizations, 4 metrics are adopted to quantify the noise characteristics in the reconstructed images. Image roughness and the standard deviation image are measures of the pixel-to-pixel variation, while NEMA and ensemble noises quantify the region-to-region variation. In addition to 4 noise metrics, we also evaluate signal to noise performance with accepted signal strength measures (recovery coefficient, SNR for quantitation), and study the relations between different metrics. From the analysis results, a linear correlation is observed between NEMA noise and ensemble noise for all different combinations of reconstruction methods and parameters, suggesting that NEMA style noise is a reasonable surrogate for ensemble noise when multiple realizations of scans are not available in practice. At the same number of iterations, the addition of PSF reduces image roughness for unfiltered images by roughly 35%, while the addition of PSF does not reduce NEMA style or ensemble noise. When noise is measured across realizations, the PSF based method offers slightly improved ( 7%) signal to noise performance across a range of reconstruction parameters.
在 PET 图像重建中加入精确的系统建模,可使图像具有明显的噪声纹理和特征。特别是,在系统模型中加入点扩散函数(PSF)已被证明能直观地降低图像噪声,但对噪声特性的研究还不够深入。这项研究对不同重建方法和参数组合下的噪声和信号特性进行了系统评估。我们评估了两种全三维 PET 重建算法:(1) OSEM 与精确扫描仪响应线建模(OSEM+LOR),(2) OSEM 与响应线和测量点扩散函数结合(OSEM+LOR+PSF),结合 4 个后滤波参数和 1-10 次迭代的影响。我们使用了一个改进的 NEMA IQ 模体,该模体充满了 68Ge,由 6 个不同大小的热球组成,目标/背景比为 4:1。该模型在临床系统上以三维模式扫描了 50 次,以提供独立的噪声现实。使用 OSEM+LOR 和 OSEM+LOR+PSF 对数据进行重建,并使用不同的重建参数。由于可以获得多个真实值,因此采用了 4 个指标来量化重建图像中的噪声特征。图像粗糙度和标准偏差图像是像素间变化的度量,而 NEMA 和集合噪声则量化了区域间的变化。除了 4 个噪声指标外,我们还使用公认的信号强度指标(恢复系数、用于量化的 SNR)来评估信噪比性能,并研究不同指标之间的关系。从分析结果来看,在所有不同的重建方法和参数组合下,NEMA 噪声和集合噪声之间都存在线性相关,这表明在实际应用中无法获得多次真实扫描的情况下,NEMA 样式的噪声是集合噪声的合理替代物。在相同的迭代次数下,添加 PSF 可将未滤波图像的粗糙度降低约 35%,而添加 PSF 并不能降低 NEMA 风格或集合噪声。在测量不同实现的噪声时,基于 PSF 的方法在一系列重建参数中的信噪比性能略有提高(7%)。
{"title":"Evaluation of Noise Properties in PSF-Based PET Image Reconstruction.","authors":"Shan Tong, Adam M Alessio, Paul E Kinahan","doi":"10.1109/nssmic.2009.5401574","DOIUrl":"10.1109/nssmic.2009.5401574","url":null,"abstract":"<p><p>The addition of accurate system modeling in PET image reconstruction results in images with distinct noise texture and characteristics. In particular, the incorporation of point spread functions (PSF) into the system model has been shown to visually reduce image noise, but the noise properties have not been thoroughly studied. This work offers a systematic evaluation of noise and signal properties in different combinations of reconstruction methods and parameters. We evaluate two fully-3D PET reconstruction algorithms: (1) OSEM with exact scanner line of response modeled (OSEM+LOR), (2) OSEM with line of response and a measured point spread function incorporated (OSEM+LOR+PSF), in combination with the effects of 4 post filtering parameters and 1-10 iterations. We used a modified NEMA IQ phantom, which was filled with 68Ge and consisted of 6 hot spheres of different sizes with a target/background ratio of 4:1. The phantom was scanned 50 times in 3D mode on a clinical system to provide independent noise realizations. Data were reconstructed with OSEM+LOR and OSEM+LOR+PSF using different reconstruction parameters. With access to multiple realizations, 4 metrics are adopted to quantify the noise characteristics in the reconstructed images. Image roughness and the standard deviation image are measures of the pixel-to-pixel variation, while NEMA and ensemble noises quantify the region-to-region variation. In addition to 4 noise metrics, we also evaluate signal to noise performance with accepted signal strength measures (recovery coefficient, SNR for quantitation), and study the relations between different metrics. From the analysis results, a linear correlation is observed between NEMA noise and ensemble noise for all different combinations of reconstruction methods and parameters, suggesting that NEMA style noise is a reasonable surrogate for ensemble noise when multiple realizations of scans are not available in practice. At the same number of iterations, the addition of PSF reduces image roughness for unfiltered images by roughly 35%, while the addition of PSF does not reduce NEMA style or ensemble noise. When noise is measured across realizations, the PSF based method offers slightly improved ( 7%) signal to noise performance across a range of reconstruction parameters.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":"2009 2009","pages":"3042-3047"},"PeriodicalIF":0.0,"publicationDate":"2009-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2873861/pdf/nihms-163925.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9491143","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2009-10-24DOI: 10.1109/NSSMIC.2009.5401995
William C J Hunter, Robert S Miyaoka, L R Macdonald, Thomas K Lewellen
We are developing a prototype monolithic scintillation camera with optical sensors on the entrance surface (SES) for use with statistically-estimated depth-of-interaction in a continuous scintillator. We opt to use Geiger-Müller mode avalanche photodiodes (GM-APDs) for the SES camera since they possess many desirable properties; for the intended application (SES and PET/MR imaging), they offer a thin attenuation profile and an operational insensitivity to large magnetic fields. However, one issue that must be addressed in using GM-APDs in an RF environment (as in MR scanners) is the thermal dissipation that can occur in this semiconductor material.Signals of GM-APDs are strongly dependent on junction temperature. Consequently, we are developing a temperature-controlled GM-APD-based PET camera whose monitored temperature can be used to dynamically account for the temperature dependence of the output signals. Presently, we aim to characterize the output-signal dependence on temperature and bias for a GM-APD-based scintillation camera.We've examined two GM-APDs, a Zecotek prototype MAPD-3N, and a SensL commercial SPMArray2. The dominant effect of temperature on gain that we observe results from a linear dependence of breakdown voltage on temperature (0.071 V/°C and 0.024 V/°C, respectively); at 2.3 V excess bias (voltage above breakdown) the resulting change in gain with temperature (without adjusting bias voltage) is -8.5% per °C for the MAPD-3N and -1.5 % per °C for the SPMArray2. For fixed excess bias, change in dark current with temperature varied widely, decreasing by 25% to 40% as temperature was changed from 20 °C to 10 °C and again by 20% to 35% going from 10 °C to 0 °C. Finally, using two MAPD-3N to read out a pair of 3.5-by-3.5-by-20 mm(3) Zecotek LFS-3 scintillators in coincidence, we observe a decrease from 1.7 nsec to 1.5 nsec in coincidence-time resolution as we lowered temperature from 23 °C to 10 °C.
{"title":"Measured Temperature Dependence of Scintillation Camera Signals Read Out by Geiger-Müller Mode Avalanche Photodiodes.","authors":"William C J Hunter, Robert S Miyaoka, L R Macdonald, Thomas K Lewellen","doi":"10.1109/NSSMIC.2009.5401995","DOIUrl":"https://doi.org/10.1109/NSSMIC.2009.5401995","url":null,"abstract":"<p><p>We are developing a prototype monolithic scintillation camera with optical sensors on the entrance surface (SES) for use with statistically-estimated depth-of-interaction in a continuous scintillator. We opt to use Geiger-Müller mode avalanche photodiodes (GM-APDs) for the SES camera since they possess many desirable properties; for the intended application (SES and PET/MR imaging), they offer a thin attenuation profile and an operational insensitivity to large magnetic fields. However, one issue that must be addressed in using GM-APDs in an RF environment (as in MR scanners) is the thermal dissipation that can occur in this semiconductor material.Signals of GM-APDs are strongly dependent on junction temperature. Consequently, we are developing a temperature-controlled GM-APD-based PET camera whose monitored temperature can be used to dynamically account for the temperature dependence of the output signals. Presently, we aim to characterize the output-signal dependence on temperature and bias for a GM-APD-based scintillation camera.We've examined two GM-APDs, a Zecotek prototype MAPD-3N, and a SensL commercial SPMArray2. The dominant effect of temperature on gain that we observe results from a linear dependence of breakdown voltage on temperature (0.071 V/°C and 0.024 V/°C, respectively); at 2.3 V excess bias (voltage above breakdown) the resulting change in gain with temperature (without adjusting bias voltage) is -8.5% per °C for the MAPD-3N and -1.5 % per °C for the SPMArray2. For fixed excess bias, change in dark current with temperature varied widely, decreasing by 25% to 40% as temperature was changed from 20 °C to 10 °C and again by 20% to 35% going from 10 °C to 0 °C. Finally, using two MAPD-3N to read out a pair of 3.5-by-3.5-by-20 mm(3) Zecotek LFS-3 scintillators in coincidence, we observe a decrease from 1.7 nsec to 1.5 nsec in coincidence-time resolution as we lowered temperature from 23 °C to 10 °C.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":"2009 ","pages":"2662-2665"},"PeriodicalIF":0.0,"publicationDate":"2009-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/NSSMIC.2009.5401995","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"29117031","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2009-10-24DOI: 10.1109/NSSMIC.2009.5401977
Edward K Fung, Beata Planeta-Wilson, Tim Mulnix, Richard E Carson
Many methods have been proposed for generating an image-derived input function (IDIF) exclusively from PET images. The purpose of this study was to assess the viability of a multimodality approach utilizing registered MR images. 3T-MR and HRRT-PET data were acquired from human subjects. Segmentation of both the left and right carotid arteries was performed in MR images using a 3D level sets method. Vessel centerlines were extracted by parameterization of the segmented voxel coordinates with either a single polynomial curve or a B-spline curve fitted to the segmented data. These centerlines were subsequently re-registered to static PET data to maximize the accurate classification of PET voxels in the ROI. The accuracy of this approach was assessed by comparison of the area under the curve (AUC) of the IDIF to that measured from conventional automated arterial blood sampling.Our method produces curves similar in shape to that of blood sampling. The mean AUC ratio of the centerline region was 0.40±0.19 before re-registration and 0.69±0.26 after re-registration. Increasing the diameter of the carotid ROI produced a smooth reduction in AUC. Thus, even with the high resolution of the HRRT, partial volume correction is still necessary. This study suggests that the combination of PET information with MR segmented regions will demonstrate an improvement over regions based solely on MR or PET alone.
{"title":"A Multimodal Approach to Image-Derived Input Functions for Brain PET.","authors":"Edward K Fung, Beata Planeta-Wilson, Tim Mulnix, Richard E Carson","doi":"10.1109/NSSMIC.2009.5401977","DOIUrl":"https://doi.org/10.1109/NSSMIC.2009.5401977","url":null,"abstract":"<p><p>Many methods have been proposed for generating an image-derived input function (IDIF) exclusively from PET images. The purpose of this study was to assess the viability of a multimodality approach utilizing registered MR images. 3T-MR and HRRT-PET data were acquired from human subjects. Segmentation of both the left and right carotid arteries was performed in MR images using a 3D level sets method. Vessel centerlines were extracted by parameterization of the segmented voxel coordinates with either a single polynomial curve or a B-spline curve fitted to the segmented data. These centerlines were subsequently re-registered to static PET data to maximize the accurate classification of PET voxels in the ROI. The accuracy of this approach was assessed by comparison of the area under the curve (AUC) of the IDIF to that measured from conventional automated arterial blood sampling.Our method produces curves similar in shape to that of blood sampling. The mean AUC ratio of the centerline region was 0.40±0.19 before re-registration and 0.69±0.26 after re-registration. Increasing the diameter of the carotid ROI produced a smooth reduction in AUC. Thus, even with the high resolution of the HRRT, partial volume correction is still necessary. This study suggests that the combination of PET information with MR segmented regions will demonstrate an improvement over regions based solely on MR or PET alone.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":"2009 ","pages":"2710-2714"},"PeriodicalIF":0.0,"publicationDate":"2009-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/NSSMIC.2009.5401977","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"29105300","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2009-02-06DOI: 10.1109/NSSMIC.2008.4774305
Kyle M Champley, Thomas K Lewellen, Lawrence R Macdonald, Robert S Miyaoka, Paul E Kinahan
Our laboratory is developing a high-resolution PET detector capable of providing depth-of-interaction information (dMiCE) by tailoring the light sharing between two adjacent detector elements. Each detector element in the prototype system has a 2×2 mm(2) cross section and is directly coupled to a micro-pixel avalanche photodiode (MAPD). In this setup the distribution of the ratio of light shared between two adjacent detector elements can be expressed as a function of the depth of interaction. The three-dimensional points of interaction of a coincidence pair of photons within the detector module is estimated by numerical calculation of an expectation of the points of interaction conditioned on the signals measured by the MAPDs (Bayesian estimate). This conditional expectation is computed from estimates of the probability density function of the light collection process and a model of the kinetics of photon interactions in the detector module. Our algorithm is capable of handling coincidences where each photon interacts any number of times within the detector module before being completely absorbed or escaping. In the case of multiple interactions our algorithm estimates the position of the first interaction for each of the coincidence photons.
{"title":"Statistical Three-Dimensional Positioning Algorithm for High-Resolution dMiCE PET Detector.","authors":"Kyle M Champley, Thomas K Lewellen, Lawrence R Macdonald, Robert S Miyaoka, Paul E Kinahan","doi":"10.1109/NSSMIC.2008.4774305","DOIUrl":"https://doi.org/10.1109/NSSMIC.2008.4774305","url":null,"abstract":"<p><p>Our laboratory is developing a high-resolution PET detector capable of providing depth-of-interaction information (dMiCE) by tailoring the light sharing between two adjacent detector elements. Each detector element in the prototype system has a 2×2 mm(2) cross section and is directly coupled to a micro-pixel avalanche photodiode (MAPD). In this setup the distribution of the ratio of light shared between two adjacent detector elements can be expressed as a function of the depth of interaction. The three-dimensional points of interaction of a coincidence pair of photons within the detector module is estimated by numerical calculation of an expectation of the points of interaction conditioned on the signals measured by the MAPDs (Bayesian estimate). This conditional expectation is computed from estimates of the probability density function of the light collection process and a model of the kinetics of photon interactions in the detector module. Our algorithm is capable of handling coincidences where each photon interacts any number of times within the detector module before being completely absorbed or escaping. In the case of multiple interactions our algorithm estimates the position of the first interaction for each of the coincidence photons.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":"2009 ","pages":"4751-4754"},"PeriodicalIF":0.0,"publicationDate":"2009-02-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/NSSMIC.2008.4774305","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"29634916","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2009-01-01DOI: 10.1109/NSSMIC.2009.5401787
D Xia, J Bian, X Han, E Y Sidky, X Pan
Flying-focal-spot (FFS) technique has been used for improving the sampling condition in advanced clinical CT by collecting multiple cone-beam data sets with the focal-spot at different locations at each "projection view". It has been demonstrated that the increased sampling rate in FFS scans can substantially reduce aliasing artifacts in reconstructed images. However, the increase of the sampling density through multiple illuminations at each view can result in the increase of radiation dose to the imaged subject. In this work, we have applied a compressive-sensing (CS)-based algorithm to image reconstruction from data acquired in FFS scans. The results of the study demonstrate that aliasing artifacts observed images reconstructed by use of analytic algorithms can be suppressed effectively in images reconstructed with this CS-based algorithm from only data acquired at one FFS scan.
{"title":"An Investigation of Compressive-sensing Image Reconstruction from Flying-focal-spot CT Data.","authors":"D Xia, J Bian, X Han, E Y Sidky, X Pan","doi":"10.1109/NSSMIC.2009.5401787","DOIUrl":"https://doi.org/10.1109/NSSMIC.2009.5401787","url":null,"abstract":"<p><p>Flying-focal-spot (FFS) technique has been used for improving the sampling condition in advanced clinical CT by collecting multiple cone-beam data sets with the focal-spot at different locations at each \"projection view\". It has been demonstrated that the increased sampling rate in FFS scans can substantially reduce aliasing artifacts in reconstructed images. However, the increase of the sampling density through multiple illuminations at each view can result in the increase of radiation dose to the imaged subject. In this work, we have applied a compressive-sensing (CS)-based algorithm to image reconstruction from data acquired in FFS scans. The results of the study demonstrate that aliasing artifacts observed images reconstructed by use of analytic algorithms can be suppressed effectively in images reconstructed with this CS-based algorithm from only data acquired at one FFS scan.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":"2009 ","pages":"3458-3462"},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/NSSMIC.2009.5401787","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"29669292","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2009-01-01DOI: 10.1109/NSSMIC.2009.5402313
Jared W Moore, Harrison H Barrett, Lars R Furenlid
We have developed a flexible x-ray micro-CT system, named FaCT, capable of changing its geometric configuration and acquisition protocol in order to best suit an object being imaged for a particular diagnostic task. High-performance computing technologies have been a major enabling factor for this adaptive CT system in terms of system control, fast reconstruction, and data analysis. In this work, we demonstrate an adaptive procedure in which a quick, sparse-projection pre-scan is performed, the data are reconstructed, and a region of interest is identified. Next, a diagnostic-quality scan is performed where, given the region of interest, the control computer calculates an illumination window for on-line control of an x-ray source masking aperture to transmit radiation only through the region of interest throughout the scan trajectory. Finally, the diagnostic scan data are reconstructed, with the region of interest being clearly resolved. We use a combination of a multi-core CPU and a pair of NVIDIA Tesla GPUs to perform these tasks.
我们开发了一种灵活的x射线微型ct系统,名为FaCT,能够改变其几何结构和采集协议,以便最适合特定诊断任务的成像对象。高性能计算技术是自适应CT系统在系统控制、快速重建和数据分析方面的主要支持因素。在这项工作中,我们展示了一种自适应过程,其中执行快速,稀疏投影预扫描,重建数据,并确定感兴趣的区域。接下来,执行诊断质量的扫描,给定感兴趣的区域,控制计算机计算用于在线控制x射线源屏蔽孔径的照明窗口,以便在整个扫描轨迹中仅通过感兴趣的区域传输辐射。最后,对诊断扫描数据进行重构,清晰地分辨出感兴趣的区域。我们使用多核CPU和一对NVIDIA Tesla gpu的组合来执行这些任务。
{"title":"Adaptive CT for High-Resolution, Controlled-Dose, Region-of-Interest Imaging.","authors":"Jared W Moore, Harrison H Barrett, Lars R Furenlid","doi":"10.1109/NSSMIC.2009.5402313","DOIUrl":"https://doi.org/10.1109/NSSMIC.2009.5402313","url":null,"abstract":"<p><p>We have developed a flexible x-ray micro-CT system, named FaCT, capable of changing its geometric configuration and acquisition protocol in order to best suit an object being imaged for a particular diagnostic task. High-performance computing technologies have been a major enabling factor for this adaptive CT system in terms of system control, fast reconstruction, and data analysis. In this work, we demonstrate an adaptive procedure in which a quick, sparse-projection pre-scan is performed, the data are reconstructed, and a region of interest is identified. Next, a diagnostic-quality scan is performed where, given the region of interest, the control computer calculates an illumination window for on-line control of an x-ray source masking aperture to transmit radiation only through the region of interest throughout the scan trajectory. Finally, the diagnostic scan data are reconstructed, with the region of interest being clearly resolved. We use a combination of a multi-core CPU and a pair of NVIDIA Tesla GPUs to perform these tasks.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":"2009 5402313,","pages":"4154-4157"},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/NSSMIC.2009.5402313","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"29353671","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2008-10-19DOI: 10.1109/nssmic.2008.4774369
T K Lewellen, R S Miyaoka, L R Macdonald, M Haselman, D Dewitt, William Hunter, S Hauck
The University of Washington developed a Firewire based data acquisition system for the MiCES small animal PET scanner. Development work has continued on new imaging scanners that require more data channels and need to be able to operate within a MRI imaging system. To support these scanners, we have designed a new version of our data acquisition system that leverages the capabilities of modern field programmable gate arrays (FPGA). The new design preserves the basic approach of the original system, but puts almost all functions into the FPGA, including the Firewire elements, the embedded processor, and pulse timing and pulse integration. The design has been extended to support implementation of the position estimation and DOl algorithms developed for the cMiCE detector module. The design is centered around an acquisition node board (ANB) that includes 65 ADC channels, Firewire 1394b support, the FPGA, a serial command bus and signal lines to support a rough coincidence window implementation to reject singles events from being sent on the Firewire bus. Adapter boards convert detector signals into differential paired signals to connect to the ANB.
{"title":"Design of a Second Generation Firewire Based Data Acquisition System for Small Animal PET Scanners.","authors":"T K Lewellen, R S Miyaoka, L R Macdonald, M Haselman, D Dewitt, William Hunter, S Hauck","doi":"10.1109/nssmic.2008.4774369","DOIUrl":"https://doi.org/10.1109/nssmic.2008.4774369","url":null,"abstract":"<p><p>The University of Washington developed a Firewire based data acquisition system for the MiCES small animal PET scanner. Development work has continued on new imaging scanners that require more data channels and need to be able to operate within a MRI imaging system. To support these scanners, we have designed a new version of our data acquisition system that leverages the capabilities of modern field programmable gate arrays (FPGA). The new design preserves the basic approach of the original system, but puts almost all functions into the FPGA, including the Firewire elements, the embedded processor, and pulse timing and pulse integration. The design has been extended to support implementation of the position estimation and DOl algorithms developed for the cMiCE detector module. The design is centered around an acquisition node board (ANB) that includes 65 ADC channels, Firewire 1394b support, the FPGA, a serial command bus and signal lines to support a rough coincidence window implementation to reject singles events from being sent on the Firewire bus. Adapter boards convert detector signals into differential paired signals to connect to the ANB.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":" ","pages":"5023-5028"},"PeriodicalIF":0.0,"publicationDate":"2008-10-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/nssmic.2008.4774369","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"28775485","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2008-10-01DOI: 10.1109/NSSMIC.2008.4774291
Lawrence Macdonald, John Edwards, Thomas Lewellen, James Rogers, Paul Kinahan
Positron emission mammography (PEM) uses two opposing gamma-ray imagers and limited-angle tomography techniques to image radiotracer distributions within the breast. Due to their smaller size and closer proximity to the source, dedicated PEM cameras can provide better spatial resolution and count sensitivity than whole-body positron emission tomographs. We performed several clinical imaging tests on a commercially available PEM camera, the PEM Flex Solo II. This system is comprised of two opposing 6 cm × 16.4 cm detectors that scan in unison to cover up to a 24 cm × 16.4 cm field of view (FOV). We measured spatial resolution, uniformity, recovery coefficients (RC), and quantification using the system clinical software. Image linearity and coefficient of variation (CV) at the edge of the FOV were also characterized. Anecdotal examples of clinical patient data are presented. Spatial resolution is 2.4 mm FWHM for image planes parallel to the detector faces; background variability is 6%; quantification and RC varied within the FOV; positioning linearity began at ~ 13 mm from the edge of the detector housing; CV increased rapidly at the edge of the FOV due to limited sampling in these image planes.
正电子发射乳房x线照相术(PEM)使用两个相对的伽马射线成像仪和有限角度断层扫描技术来成像乳房内的放射性示踪剂分布。由于其体积更小,距离源更近,专用PEM相机可以提供比全身正电子发射层析成像更好的空间分辨率和计数灵敏度。我们在市售的PEM Flex Solo II相机上进行了几次临床成像测试。该系统由两个相对的6厘米× 16.4厘米的探测器组成,它们同步扫描以覆盖24厘米× 16.4厘米的视场(FOV)。我们使用系统临床软件测量了空间分辨率、均匀性、恢复系数(RC)和定量。对视场边缘的图像线性度和变异系数(CV)进行了表征。临床病人数据的轶事例子提出。平行于探测器面像面的空间分辨率为2.4 mm FWHM;背景变异性为6%;量化和RC在视场范围内变化;定位线性度从探测器外壳边缘~ 13mm处开始;由于在这些图像平面上采样有限,CV在视场边缘迅速增加。
{"title":"Clinical Imaging Characteristics of the Positron Emission Mammography PEM Flex Solo II.","authors":"Lawrence Macdonald, John Edwards, Thomas Lewellen, James Rogers, Paul Kinahan","doi":"10.1109/NSSMIC.2008.4774291","DOIUrl":"https://doi.org/10.1109/NSSMIC.2008.4774291","url":null,"abstract":"<p><p>Positron emission mammography (PEM) uses two opposing gamma-ray imagers and limited-angle tomography techniques to image radiotracer distributions within the breast. Due to their smaller size and closer proximity to the source, dedicated PEM cameras can provide better spatial resolution and count sensitivity than whole-body positron emission tomographs. We performed several clinical imaging tests on a commercially available PEM camera, the PEM Flex Solo II. This system is comprised of two opposing 6 cm × 16.4 cm detectors that scan in unison to cover up to a 24 cm × 16.4 cm field of view (FOV). We measured spatial resolution, uniformity, recovery coefficients (RC), and quantification using the system clinical software. Image linearity and coefficient of variation (CV) at the edge of the FOV were also characterized. Anecdotal examples of clinical patient data are presented. Spatial resolution is 2.4 mm FWHM for image planes parallel to the detector faces; background variability is 6%; quantification and RC varied within the FOV; positioning linearity began at ~ 13 mm from the edge of the detector housing; CV increased rapidly at the edge of the FOV due to limited sampling in these image planes.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":"11 2008","pages":"4494-4501"},"PeriodicalIF":0.0,"publicationDate":"2008-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/NSSMIC.2008.4774291","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"29014403","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2008-10-01DOI: 10.1109/NSSMIC.2008.4774469
Robert S Miyaoka, Xiaoli Li, Cate Lockhart, Tom K Lewellen
We report on a high resolution, monolithic crystal PET detector design concept that provides depth of interaction (DOI) positioning within the crystal and is compatible for operation in a MRI scanner to support multimodal anatomic and functional imaging. Our design utilizes a novel sensor on the entrance surface (SES) approach combined with a maximum likelihood positioning algorithm. The sensor will be a two-dimensional array of micro-pixel avalanche photodiodes (MAPD). MAPDs are a new type of solid-state photodetector with Geiger mode operation that can provide signal gain similar to a photomltipiler tube (PMT). In addition, they can be operated in high magnetic fields to support PET/MR imaging. Utilizing a multi-step simulation process, we determined the intrinsic spatial resolution characteristics for a variety of detector configurations. The crystal was always modeled as a 48.8 mm by 48.8 mm by 15 mm monolithic slab of a lutetium-based scintillator. The SES design was evaluated via simulation for three different two-dimensional MAPD array sizes: 8×8 with 5.8×5.8 mm(2) pads; 12×12 with 3.8×3.8 mm(2) pads; and 16×16 with 2.8×2.8 mm(2) pads. To reduce the number of signal channels row-column summing readout was explored for the 12×12 and 16×16 channel array devices. The intrinsic spatial resolution for the 8×8 MAPD array is 0.88 mm FWHM in X and Y, and 1.83 mm FWHM in Z (i.e., DOI). Comparing the results versus using a conventional design with the photosensors on the backside of the crystal, an average improvement of ~24% in X and Y and 20% in Z is achieved. The X, Y intrinsic spatial resolution improved to 0.66 mm and 0.65 mm FWHM for the 12×12 and 16×16 MAPDs using row-column readout. Using the 12×12 and 16×16 arrays also led to a slight improvement in the DOI positioning accuracy.
我们报告了一种高分辨率的单片晶体PET检测器设计概念,该设计概念在晶体内提供相互作用深度(DOI)定位,并与MRI扫描仪中的操作兼容,以支持多模态解剖和功能成像。我们的设计采用了一种新型的入口表面传感器(SES)方法,结合了最大似然定位算法。传感器将是一个微像素雪崩光电二极管(MAPD)的二维阵列。mapd是一种具有盖革模式操作的新型固态光电探测器,可以提供类似于光电倍增管(PMT)的信号增益。此外,它们可以在高磁场下操作,以支持PET/MR成像。利用多步模拟过程,我们确定了各种探测器配置的固有空间分辨率特征。该晶体一直被建模为一个基于镥的闪烁体的48.8 mm × 48.8 mm × 15 mm的单片板。SES设计通过模拟评估了三种不同的二维MAPD阵列尺寸:8×8与5.8×5.8 mm(2)的衬垫;12×12带3.8×3.8 mm(2)垫片;和16×16与2.8×2.8毫米(2)垫片。为了减少信号通道的数量,探索了12×12和16×16通道阵列器件的行列求和读出。8×8 MAPD阵列在X和Y方向的固有空间分辨率为0.88 mm FWHM,在Z方向(即DOI)的固有空间分辨率为1.83 mm FWHM。与在晶体背面安装光传感器的传统设计相比,在X和Y上平均提高了24%,在Z上平均提高了20%。使用行-列读出方式,12×12和16×16 mapd的X, Y固有空间分辨率分别提高到0.66 mm和0.65 mm FWHM。使用12×12和16×16阵列也导致DOI定位精度略有提高。
{"title":"Design of a High Resolution, Monolithic Crystal, PET/MRI Detector with DOI Positioning Capability.","authors":"Robert S Miyaoka, Xiaoli Li, Cate Lockhart, Tom K Lewellen","doi":"10.1109/NSSMIC.2008.4774469","DOIUrl":"https://doi.org/10.1109/NSSMIC.2008.4774469","url":null,"abstract":"<p><p>We report on a high resolution, monolithic crystal PET detector design concept that provides depth of interaction (DOI) positioning within the crystal and is compatible for operation in a MRI scanner to support multimodal anatomic and functional imaging. Our design utilizes a novel sensor on the entrance surface (SES) approach combined with a maximum likelihood positioning algorithm. The sensor will be a two-dimensional array of micro-pixel avalanche photodiodes (MAPD). MAPDs are a new type of solid-state photodetector with Geiger mode operation that can provide signal gain similar to a photomltipiler tube (PMT). In addition, they can be operated in high magnetic fields to support PET/MR imaging. Utilizing a multi-step simulation process, we determined the intrinsic spatial resolution characteristics for a variety of detector configurations. The crystal was always modeled as a 48.8 mm by 48.8 mm by 15 mm monolithic slab of a lutetium-based scintillator. The SES design was evaluated via simulation for three different two-dimensional MAPD array sizes: 8×8 with 5.8×5.8 mm(2) pads; 12×12 with 3.8×3.8 mm(2) pads; and 16×16 with 2.8×2.8 mm(2) pads. To reduce the number of signal channels row-column summing readout was explored for the 12×12 and 16×16 channel array devices. The intrinsic spatial resolution for the 8×8 MAPD array is 0.88 mm FWHM in X and Y, and 1.83 mm FWHM in Z (i.e., DOI). Comparing the results versus using a conventional design with the photosensors on the backside of the crystal, an average improvement of ~24% in X and Y and 20% in Z is achieved. The X, Y intrinsic spatial resolution improved to 0.66 mm and 0.65 mm FWHM for the 12×12 and 16×16 MAPDs using row-column readout. Using the 12×12 and 16×16 arrays also led to a slight improvement in the DOI positioning accuracy.</p>","PeriodicalId":73298,"journal":{"name":"IEEE Nuclear Science Symposium conference record. Nuclear Science Symposium","volume":" ","pages":"4688-4692"},"PeriodicalIF":0.0,"publicationDate":"2008-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/NSSMIC.2008.4774469","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"29107390","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}