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Increased functional connectivity of amygdalar-frontal pathways in patients with alcohol use disorder and childhood trauma 酒精使用障碍和童年创伤患者杏仁核-额叶通路的功能连接性增强
Q4 Neuroscience Pub Date : 2024-10-02 DOI: 10.1016/j.ynirp.2024.100223
Elisabeth Jehli , Fabienne Burri , Niklaus Denier , Franz Moggi , Andrea Federspiel , Roland Wiest , Maria Stein , Tobias Bracht , Matthias Grieder , Leila M. Soravia
Childhood trauma (CT) often co-occurs with alcohol use disorder (AUD) and is associated with poor treatment outcome. We could demonstrated that patients with AUD and a history of childhood trauma showed reduced structural connectivity of the amygdala. Here, we additionally aimed to investigate fronto-limbic functional connectivity (FC) in patients with AUD with (AUD-CT) and without (AUD-noCT) CT. Based on findings in CT, we hypothesized reduced FC of the amygdala with the prefrontal cortex in AUD-CT and worse treatment outcome compared to AUD-noCT.
Resting state fMRI scans were acquired in abstinent inpatients with AUD and healthy controls (HCs). We compared bilateral amygdala FC between AUD-CT (n = 21), AUD-noCT (n = 22), and HC (n = 27) using seed-based connectivity (SBC) and region-of-interest to region-of-interest (ROI-ROI) analysis. Sociodemographic and alcohol-specific variables (percent days abstinent, PDA) were assessed at treatment admission and three-month follow-up. The Childhood Trauma Questionnaire (CTQ) assessed trauma severity. SBC analysis revealed that AUD-CT showed increased FC of the left and right amygdala with the medial prefrontal cortex and left paracingulate gyrus compared to HC. AUD-CT showed increased ROI-ROI FC of the left with the right amygdala and the right amygdala with the medial prefrontal cortex. Moreover, AUD-CT exhibited a greater reduction of PDA at three-month follow-up compared to AUD-noCT.
Increased FC of the amygdala, the medial prefrontal cortex, and paracingulate gyrus in AUD-CT might be a compensatory adaption to the reduced structural connectivity of the amygdala. Those specific alterations of FC in AUD-CT may represent a distinguishable neurobiological subtype of AUD, possibly underlying the complex clinical picture and worse treatment outcome.
童年创伤(CT)经常与酒精使用障碍(AUD)并发,并且与治疗效果不佳有关。我们已经证明,有童年创伤史的酒精使用障碍患者的杏仁核结构连接性降低。在此,我们还旨在研究患有 CT(AUD-CT)和未患有 CT(AUD-noCT)的 AUD 患者的前边缘功能连接(FC)。根据 CT 的研究结果,我们推测 AUD-CT 患者杏仁核与前额叶皮层的功能连通性降低,治疗效果也会比 AUD-noCT 患者更差。我们对戒断的 AUD 住院患者和健康对照组(HCs)进行了静息状态 fMRI 扫描。我们使用种子连接(SBC)和兴趣区对兴趣区(ROI-ROI)分析比较了AUD-CT(21人)、AUD-noCT(22人)和HC(27人)之间的双侧杏仁核FC。在入院治疗和三个月随访时对社会人口学变量和酒精特异性变量(戒酒天数百分比,PDA)进行了评估。儿童创伤问卷(CTQ)评估创伤的严重程度。SBC分析显示,与HC相比,AUD-CT显示左侧和右侧杏仁核与内侧前额叶皮层和左侧扣带回的FC增加。AUD-CT 显示左侧杏仁核与右侧杏仁核以及右侧杏仁核与内侧前额叶皮层的 ROI-ROI FC 增加。AUD-CT 中杏仁核、内侧前额叶皮层和扣带回的 FC 增加可能是对杏仁核结构连接性降低的一种补偿性适应。AUD-CT中FC的这些特定改变可能代表了AUD的一种可区分的神经生物学亚型,可能是其复杂的临床表现和较差的治疗效果的基础。
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引用次数: 0
Music literacy shapes the specialization of a right hemispheric word reading area 音乐素养塑造了右半球文字阅读区的特化能力
Q4 Neuroscience Pub Date : 2024-09-25 DOI: 10.1016/j.ynirp.2024.100219
Alice Mado Proverbio , Elham Sanoubari
This study aimed to examine differences in the brain activity of professional musicians and non-musicians, particularly in relation to neuroplastic changes that may be associated with musical training. Specifically, we investigated whether the ability to read complex musical notation might be linked to neurofunctional adaptations that could influence word reading mechanisms. The study involved 80 participants (half of which were musicians). High-density EEG recordings and swLORETA inverse solutions were employed to analyze brain activity related to word processing and orthographic analysis. The electromagnetic signals were analyzed in the temporal window corresponding to the latency of N170 component (150–190 ms). Musicians and musically naïve people (controls) were matched based on native language, sociocultural and educational status, age, and laterality preference. Behavioural data and reading proficiency tests demonstrated higher reading skills (for words, non-words and text), and faster RTs to target letters embedded in words, in musicians. Source reconstruction showed fundamental differences in word reading mechanisms between musicians and non-musicians, including a larger involvement of the right occipitotemporal cortex, in the former than the latter. In particular, musicians showed a bilateral activation of the middle occipital gyrus (BA19, Visual Word Form Area), which was strongly lateralized to the left hemisphere in controls, during word orthographic analysis. A relationship is proposed between music literacy, enhanced reading skills and the development of a right-sided reading area for notation recognition in musicians, which could serve as a potential protective factor for ‘surface’ dyslexia.
本研究旨在探讨专业音乐家和非音乐家大脑活动的差异,特别是与音乐训练可能相关的神经可塑性变化。具体来说,我们研究了阅读复杂音乐符号的能力是否可能与影响文字阅读机制的神经功能适应有关。这项研究涉及 80 名参与者(其中一半是音乐家)。我们采用了高密度脑电图记录和 swLORETA 逆解法来分析与文字处理和正字法分析相关的大脑活动。电磁信号在与 N170 分量潜伏期(150-190 毫秒)相对应的时间窗口内进行分析。根据母语、社会文化和教育状况、年龄和侧向偏好,将音乐家和音乐天真的人(对照组)进行配对。行为数据和阅读能力测试表明,音乐家的阅读能力(单词、非单词和文本)更高,对单词中嵌入的目标字母的反应时间更快。源重建显示,音乐家和非音乐家在单词阅读机制上存在根本差异,包括前者比后者更多地涉及右枕颞皮层。特别是,在单词正字法分析过程中,音乐家表现出枕骨中回(BA19,视觉单词形式区)的双侧激活,而在对照组中,该区域则强烈偏向左半球。研究提出了音乐素养、阅读能力的提高与音乐家右侧阅读区的发展之间的关系,音乐家右侧阅读区可作为 "表面 "阅读障碍的潜在保护因素。
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引用次数: 0
Quantitative 3D reconstruction of viral vector distribution in rodent and ovine brain following local delivery 局部给药后病毒载体在啮齿动物和绵羊大脑中分布的定量三维重建
Q4 Neuroscience Pub Date : 2024-09-23 DOI: 10.1016/j.ynirp.2024.100218
Roberta Poceviciute, Kenneth Mitchell, Angeliki Maria Nikolakopoulou, Suehyun K. Cho, Xiaobo Ma, Phillip Chen, Samantha Figueroa, Ethan J. Sarmiento, Aryan Singh, Oren Hartstein, William G. Loudon, Florent Cros, Alexander S. Kiselyov
Viral vectors are an active area of research and development to treat diseases of the central nervous system (CNS). However, systemic delivery of large-molecular weight biologics is complicated by limited crossing of the blood-brain barrier, immunological clearance from the circulation, off-target effects, and systemic or organ toxicity. Local drug delivery can mitigate these obstacles, however, the drug must still be distributed over sufficiently large tissue volume to achieve the desired efficacy. In the field of drug delivery, quantitative, high resolution spatial analysis of drug distribution in the brain and other organs poses a challenge. To address this issue, we introduce a computational pipeline to reconstruct and quantify 3D distribution of locally delivered viral vectors from 2D microscopy images of subsampled brain sections. This pipeline, which combined existing and newly developed machine-learning and other computational tools, effectively removed false positive artifacts abundant in large-scale images of uncleared tissue sections, and subsampling adequately predicted the dispersion of model viral vectors from the point of local drug delivery. Furthermore, the pipeline successfully captured differences in the distribution of adeno virus (AdV) and adeno-associated virus (AAV) vectors exhibiting varying sizes and transport properties. Notably, the proposed method is directly applicable to the distribution studies of therapeutics in large animal models. Thus, our developed pipeline is an accessible tool that can aid the research and development of local drug delivery strategies for the treatment of CNS diseases with viral vectors and potentially other therapeutics.
病毒载体是治疗中枢神经系统疾病的一个活跃研发领域。然而,大分子量生物制剂的全身给药由于难以穿越血脑屏障、血液循环中的免疫清除、脱靶效应以及全身或器官毒性而变得复杂。局部给药可减轻这些障碍,但药物仍必须分布在足够大的组织体积内才能达到预期疗效。在给药领域,对药物在大脑和其他器官中的分布进行定量、高分辨率的空间分析是一项挑战。为了解决这个问题,我们引入了一个计算管道,从亚取样脑切片的二维显微图像中重建和量化局部给药病毒载体的三维分布。该管道结合了现有和新开发的机器学习及其他计算工具,有效消除了未清除组织切片的大规模图像中大量存在的假阳性伪影,子采样充分预测了模型病毒载体从局部给药点的分散情况。此外,该管道还成功捕捉到了腺病毒(AdV)和腺相关病毒(AAV)载体在大小和运输特性上的分布差异。值得注意的是,所提出的方法可直接用于治疗药物在大型动物模型中的分布研究。因此,我们开发的流水线是一种易于使用的工具,可以帮助研究和开发局部给药策略,利用病毒载体和潜在的其他疗法治疗中枢神经系统疾病。
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引用次数: 0
Changes in functional and structural brain connectivity following bilateral hand transplantation 双侧手移植后大脑功能和结构连接的变化
Q4 Neuroscience Pub Date : 2024-09-21 DOI: 10.1016/j.ynirp.2024.100222
David J. Madden , Jenna L. Merenstein , Todd B. Harshbarger , Linda C. Cendales

As a surgical treatment following amputation or loss of an upper limb, nearly 200 hand transplantations have been completed to date. We report here a magnetic resonance imaging (MRI) investigation of functional and structural brain connectivity for a bilateral hand transplant patient (female, 60 years of age), with a preoperative baseline and three postoperative testing sessions each separated by approximately six months. We used graph theoretical analyses to estimate connectivity within and between modules (networks of anatomical nodes), particularly a sensorimotor network (SMN), from resting-state functional MRI and structural diffusion-weighted imaging (DWI). For comparison, corresponding MRI measures of connectivity were obtained from 10 healthy, age-matched controls, at a single testing session. The patient's within-module functional connectivity (both SMN and non-SMN modules), and structural within-SMN connectivity, were higher preoperatively than that of the controls, indicating a response to amputation. Postoperatively, the patient's within-module functional connectivity decreased towards the control participants' values, across the 1.5 years postoperatively, particularly for hand-related nodes within the SMN module, suggesting a return to a more canonical functional organization. Whereas the patient's structural connectivity values remained relatively constant postoperatively, some evidence suggested that structural connectivity supported the postoperative changes in within-module functional connectivity.

作为截肢或失去上肢后的一种外科治疗方法,迄今已完成近 200 例手部移植手术。我们在此报告了一项磁共振成像(MRI)研究,该研究针对一名双侧手部移植患者(女性,60 岁)的大脑功能和结构连通性进行了研究,该研究包括术前基线和三次术后测试,每次测试间隔约六个月。我们采用图论分析法,通过静息态功能磁共振成像和结构弥散加权成像(DWI)估算模块(解剖节点网络)内部和模块之间的连通性,尤其是感觉运动网络(SMN)。为了进行比较,还从 10 名健康、年龄匹配的对照组患者身上获得了相应的 MRI 连接性测量结果。患者术前的模块内功能连通性(包括 SMN 模块和非 SMN 模块)以及结构性 SMN 模块内连通性均高于对照组,这表明患者对截肢有反应。术后 1.5 年内,患者的模块内功能连通性向对照组参与者的值下降,尤其是 SMN 模块内与手有关的节点,这表明患者恢复了更典型的功能组织。虽然患者的结构连通性值在术后保持相对稳定,但有证据表明,结构连通性支持术后模块内功能连通性的变化。
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引用次数: 0
Investigating the relationship between thalamic iron concentration and disease severity in secondary progressive multiple sclerosis using quantitative susceptibility mapping: Cross-sectional analysis from the MS-STAT2 randomised controlled trial 利用定量易感性图谱研究继发性进行性多发性硬化症丘脑铁浓度与疾病严重程度之间的关系:MS-STAT2随机对照试验的横断面分析
Q4 Neuroscience Pub Date : 2024-09-01 DOI: 10.1016/j.ynirp.2024.100216
Thomas Williams , Nevin John , Alberto Calvi , Alessia Bianchi , Floriana De Angelis , Anisha Doshi , Sarah Wright , Madiha Shatila , Marios C. Yiannakas , Fatima Chowdhury , Jon Stutters , Antonio Ricciardi , Ferran Prados , David MacManus , Francesco Grussu , Anita Karsa , Becky Samson , Marco Battiston , Claudia A.M. Gandini Wheeler-Kingshott , Karin Shmueli , Judy Beveridge
<div><h3>Background</h3><p>Deep grey matter pathology is a key driver of disability worsening in people with multiple sclerosis. Quantitative susceptibility mapping (QSM) is an advanced magnetic resonance imaging (MRI) technique which quantifies local magnetic susceptibility from variations in phase produced by changes in the local magnetic field. In the deep grey matter, susceptibility has previously been validated against tissue iron concentration. However, it currently remains unknown whether susceptibility is abnormal in older progressive MS cohorts, and whether it correlates with disability.</p></div><div><h3>Objectives</h3><p>To investigate differences in mean regional susceptibility in deep grey matter between people with secondary progressive multiple sclerosis (SPMS) and healthy controls; to examine in patients the relationships between deep grey matter susceptibility and clinical and imaging measures of disease severity.</p></div><div><h3>Methods</h3><p>Baseline data from a subgroup of the MS-STAT2 trial (simvastatin vs. placebo in SPMS, NCT03387670) were included. The subgroup underwent clinical assessments and an advanced MRI protocol at 3T. A cohort of age-matched healthy controls underwent the same MRI protocol. Susceptibility maps were reconstructed using a robust QSM pipeline from multi-echo 3D gradient-echo sequence. Regions of interest (ROIs) in the thalamus, globus pallidus and putamen were segmented from 3D T1-weighted images, and lesions segmented from 3D fluid-attenuated inversion recovery images. Linear regression was used to compare susceptibility from ROIs between patients and controls, adjusting for age and sex. Where significant differences were found, we further examined the associations between ROI susceptibility and clinical and imaging measures of MS severity.</p></div><div><h3>Results</h3><p>149 SPMS (77% female; mean age: 53 yrs; median Expanded Disability Status Scale (EDSS): 6.0 [interquartile range 4.5–6.0]) and 33 controls (52% female, mean age: 57) were included.</p><p>Thalamic susceptibility was significantly lower in SPMS compared to controls: mean (SD) 28.6 (12.8) parts per billion (ppb) in SPMS vs. 39.2 (12.7) ppb in controls; regression coefficient: −12.0 [95% confidence interval: −17.0 to −7.1], p < 0.001. In contrast, globus pallidus and putamen susceptibility were similar between both groups.</p><p>In SPMS, a 10 ppb lower thalamic susceptibility was associated with a +0.13 [+0.01 to +0.24] point higher EDSS (p < 0.05), a −2.4 [−3.8 to −1.0] point lower symbol digit modality test (SDMT, p = 0.001), and a −2.4 [−3.7 to −1.1] point lower Sloan low contrast acuity, 2.5% (p < 0.01).</p><p>Lower thalamic susceptibility was also strongly associated with a higher T2 lesion volume (T2LV, p < 0.001) and lower normalised whole brain, deep grey matter and thalamic volumes (all p < 0.001).</p></div><div><h3>Conclusions</h3><p>The reduced thalamic susceptibility found in SPMS compared to controls sug
背景深部灰质病变是多发性硬化症患者残疾恶化的主要原因。定量磁感应强度图(QSM)是一种先进的磁共振成像(MRI)技术,它能通过局部磁场变化产生的相位变化来量化局部磁感应强度。在深部灰质中,先前已根据组织铁浓度验证了磁感应强度。目的 研究继发性进行性多发性硬化症(SPMS)患者与健康对照组之间深灰色物质平均区域磁感应强度的差异;研究患者深灰色物质磁感应强度与疾病严重程度的临床和影像测量之间的关系。该亚组接受了临床评估和先进的 3T 磁共振成像方案。年龄匹配的健康对照组也接受了相同的磁共振成像方案。利用多回波三维梯度回波序列的稳健 QSM 管道重建了易感性图。从三维T1加权图像中分割出丘脑、丘脑球和丘脑的感兴趣区(ROI),并从三维流体衰减反转恢复图像中分割出病灶。使用线性回归比较患者和对照组 ROI 的易感性,并对年龄和性别进行调整。在发现明显差异的地方,我们进一步研究了ROI易感性与多发性硬化症严重程度的临床和影像测量之间的关联。结果149名SPMS患者(77%为女性;平均年龄:53岁;中位数扩展残疾状态量表(EDSS):6.0[四分位数]:与对照组相比,SPMS 的丘脑敏感性显著降低:SPMS 的平均值(标清)为 28.6 (12.8) ppb,对照组为 39.2 (12.7) ppb;回归系数为-12.0 [95% 置信度]:回归系数:-12.0 [95% 置信区间:-17.0 至 -7.1],p < 0.001。相比之下,丘脑和丘脑易感性在两组之间相似。在SPMS中,丘脑易感性每降低10 ppb,EDSS就会增加+0.13 [+0.01 to +0.在 SPMS 中,丘脑易感性降低 10 ppb 与 EDSS 升高 +0.13 [+0.01 至 +0.24]点(p <;0.05)、符号数字模型测试(SDMT,p = 0.001)降低 -2.4 [-3.8 至 -1.0] 点和 Sloan 低对比度敏锐度降低 2.5% [-3.7 至 -1.1] 点(p <;0.01)有关。较低的丘脑易感性还与较高的 T2 病变体积(T2LV,p <0.001)和较低的正常化全脑、深灰质和丘脑体积(均为 p <0.001)密切相关。观察到的丘脑易感性降低与更严重的肢体、认知和视力残疾之间的关系表明,丘脑铁的降低可能与临床疾病进展的重要机制有关。这种机制似乎将丘脑铁的减少与较高的 T2LV 和丘脑萎缩的发展紧密联系在一起,从而鼓励了对 QSM 衍生的丘脑易感性作为 SPMS 疾病严重程度的生物标志物的进一步研究。
{"title":"Investigating the relationship between thalamic iron concentration and disease severity in secondary progressive multiple sclerosis using quantitative susceptibility mapping: Cross-sectional analysis from the MS-STAT2 randomised controlled trial","authors":"Thomas Williams ,&nbsp;Nevin John ,&nbsp;Alberto Calvi ,&nbsp;Alessia Bianchi ,&nbsp;Floriana De Angelis ,&nbsp;Anisha Doshi ,&nbsp;Sarah Wright ,&nbsp;Madiha Shatila ,&nbsp;Marios C. Yiannakas ,&nbsp;Fatima Chowdhury ,&nbsp;Jon Stutters ,&nbsp;Antonio Ricciardi ,&nbsp;Ferran Prados ,&nbsp;David MacManus ,&nbsp;Francesco Grussu ,&nbsp;Anita Karsa ,&nbsp;Becky Samson ,&nbsp;Marco Battiston ,&nbsp;Claudia A.M. Gandini Wheeler-Kingshott ,&nbsp;Karin Shmueli ,&nbsp;Judy Beveridge","doi":"10.1016/j.ynirp.2024.100216","DOIUrl":"10.1016/j.ynirp.2024.100216","url":null,"abstract":"&lt;div&gt;&lt;h3&gt;Background&lt;/h3&gt;&lt;p&gt;Deep grey matter pathology is a key driver of disability worsening in people with multiple sclerosis. Quantitative susceptibility mapping (QSM) is an advanced magnetic resonance imaging (MRI) technique which quantifies local magnetic susceptibility from variations in phase produced by changes in the local magnetic field. In the deep grey matter, susceptibility has previously been validated against tissue iron concentration. However, it currently remains unknown whether susceptibility is abnormal in older progressive MS cohorts, and whether it correlates with disability.&lt;/p&gt;&lt;/div&gt;&lt;div&gt;&lt;h3&gt;Objectives&lt;/h3&gt;&lt;p&gt;To investigate differences in mean regional susceptibility in deep grey matter between people with secondary progressive multiple sclerosis (SPMS) and healthy controls; to examine in patients the relationships between deep grey matter susceptibility and clinical and imaging measures of disease severity.&lt;/p&gt;&lt;/div&gt;&lt;div&gt;&lt;h3&gt;Methods&lt;/h3&gt;&lt;p&gt;Baseline data from a subgroup of the MS-STAT2 trial (simvastatin vs. placebo in SPMS, NCT03387670) were included. The subgroup underwent clinical assessments and an advanced MRI protocol at 3T. A cohort of age-matched healthy controls underwent the same MRI protocol. Susceptibility maps were reconstructed using a robust QSM pipeline from multi-echo 3D gradient-echo sequence. Regions of interest (ROIs) in the thalamus, globus pallidus and putamen were segmented from 3D T1-weighted images, and lesions segmented from 3D fluid-attenuated inversion recovery images. Linear regression was used to compare susceptibility from ROIs between patients and controls, adjusting for age and sex. Where significant differences were found, we further examined the associations between ROI susceptibility and clinical and imaging measures of MS severity.&lt;/p&gt;&lt;/div&gt;&lt;div&gt;&lt;h3&gt;Results&lt;/h3&gt;&lt;p&gt;149 SPMS (77% female; mean age: 53 yrs; median Expanded Disability Status Scale (EDSS): 6.0 [interquartile range 4.5–6.0]) and 33 controls (52% female, mean age: 57) were included.&lt;/p&gt;&lt;p&gt;Thalamic susceptibility was significantly lower in SPMS compared to controls: mean (SD) 28.6 (12.8) parts per billion (ppb) in SPMS vs. 39.2 (12.7) ppb in controls; regression coefficient: −12.0 [95% confidence interval: −17.0 to −7.1], p &lt; 0.001. In contrast, globus pallidus and putamen susceptibility were similar between both groups.&lt;/p&gt;&lt;p&gt;In SPMS, a 10 ppb lower thalamic susceptibility was associated with a +0.13 [+0.01 to +0.24] point higher EDSS (p &lt; 0.05), a −2.4 [−3.8 to −1.0] point lower symbol digit modality test (SDMT, p = 0.001), and a −2.4 [−3.7 to −1.1] point lower Sloan low contrast acuity, 2.5% (p &lt; 0.01).&lt;/p&gt;&lt;p&gt;Lower thalamic susceptibility was also strongly associated with a higher T2 lesion volume (T2LV, p &lt; 0.001) and lower normalised whole brain, deep grey matter and thalamic volumes (all p &lt; 0.001).&lt;/p&gt;&lt;/div&gt;&lt;div&gt;&lt;h3&gt;Conclusions&lt;/h3&gt;&lt;p&gt;The reduced thalamic susceptibility found in SPMS compared to controls sug","PeriodicalId":74277,"journal":{"name":"Neuroimage. Reports","volume":"4 3","pages":"Article 100216"},"PeriodicalIF":0.0,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2666956024000229/pdfft?md5=5997b8a4e7540c4e26ae502b8ece2d80&pid=1-s2.0-S2666956024000229-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142151021","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Early alterations of thalami- and hippocampi-cortical functional connectivity as biomarkers of seizures after traumatic brain injury 丘脑和海马-皮层功能连接的早期改变是脑外伤后癫痫发作的生物标志物
Q4 Neuroscience Pub Date : 2024-09-01 DOI: 10.1016/j.ynirp.2024.100217
Marina Weiler , Evan S. Lutkenhoff , Brunno M. de Campos , Raphael F. Casseb , Paul M. Vespa , Martin M. Monti , for the EpiBioS4Rx Study Group

The Epilepsy Bioinformatics Study for Antiepileptogenic Therapy (EpiBioS4Rx, project 3) is a prospective multicenter clinical observational study to identify early biomarkers of epileptogenesis after moderate-to-severe traumatic brain injury (TBI). We used a seed-based approach applied to acute (i.e., ≤14 days) fMRI imaging data, directly testing the hypothesis that the presence of seizures up to two years following brain trauma is associated with functional changes within hippocampi and thalami-cortical networks. Additionally, we hypothesized that the network connectivity involving thalami and hippocampi circuits underlying early and late-onset seizures would differ. Approximately 30% of the initial dataset was deemed unusable due to MRI issues. Approximately 50% of the enrolled sample was lost to a 2-year follow-up. After preprocessing the fMRI data, approximately 40% of the follow-up sample had to be excluded from the analysis due to excessive in-scanner movements, as assessed by state-of-the-art quality control protocols. Only 37 patients provided data that was suitable for the seed-based analysis. Despite these challenges, the remaining, high-quality data returned noteworthy findings. We identified specific hippocampi and thalami biomarkers associated with both early and late seizures following TBI (p < .05, FWE-corrected at the cluster level). The predictive capability for the development of late seizures after TBI, when adding fMRI data to demographic and clinical data, provided 88% accuracy — an additional 8% improvement compared to using demographic and clinical data alone. Our findings highlight the potential of fMRI for uncovering, in hippocampal and thalamic cortical networks, biomarkers of early and late seizures following TBI. However, they also highlight the important challenges that need to be overcome in order for fMRI to become an effective biomarker and prognostic tool in the intensive care context.

抗癫痫治疗的癫痫生物信息学研究(EpiBioS4Rx,项目3)是一项前瞻性多中心临床观察研究,旨在确定中重度脑外伤(TBI)后癫痫发生的早期生物标志物。我们对急性期(即≤14天)的fMRI成像数据采用了基于种子的方法,直接测试了脑外伤后两年内癫痫发作与海马和丘脑-皮层网络功能变化相关的假设。此外,我们还假设涉及丘脑和海马回路的网络连接在早期和晚期癫痫发作时会有所不同。由于核磁共振成像问题,大约 30% 的初始数据集被认为无法使用。约50%的登记样本在2年的随访中丢失。在对 fMRI 数据进行预处理后,根据最先进的质量控制协议评估,约有 40% 的随访样本因扫描仪内移动过多而不得不排除在分析之外。只有 37 名患者提供的数据适合进行基于种子的分析。尽管存在这些挑战,但剩余的高质量数据仍提供了值得注意的发现。我们确定了与创伤性脑损伤后早期和晚期癫痫发作相关的特定海马和丘脑生物标志物(p < .05,在群集水平上进行了 FWE 校正)。当将 fMRI 数据添加到人口统计学和临床数据中时,对创伤后癫痫晚期发作的预测能力达到了 88% 的准确率,比单独使用人口统计学和临床数据提高了 8%。我们的研究结果凸显了 fMRI 在海马和丘脑皮层网络中发现创伤后癫痫早期和晚期发作生物标志物的潜力。不过,这些研究结果也强调了要使 fMRI 成为重症监护中有效的生物标记和预后工具所需要克服的重要挑战。
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引用次数: 0
Continuum topological derivative - A novel application tool for segmentation of CT and MRI images 连续拓扑导数--用于 CT 和 MRI 图像分割的新型应用工具
Q4 Neuroscience Pub Date : 2024-08-01 DOI: 10.1016/j.ynirp.2024.100215
Viswanath Muthukrishnan , Sandeep Jaipurkar , Nedumaran Damodaran
<div><h3>Introduction</h3><p>Computed Tomography (CT) and Magnetic Resonance Imaging (MRI) are essential tools for unraveling anatomical and tissue properties, particularly in the head and brain. CT provides high-contrast images, particularly valuable in cases such as cerebral bleeds, and also aids in estimating cranial deformities and organ shape deviations. MRI, on the other hand, offers excellent imaging of cerebral artery regions, allowing analysis of various cerebral pathologies through different sequences. Beyond detecting common head and brain disorders, these modalities play a crucial role in identifying abnormalities in orbits, middle cerebral artery territories, brain ventricles, soft tissues, and bones. A unique aspect of brain MRI is its ability to produce multiplanar brain assessments. Both head/brain CT and MRI are invaluable for studying haemorrhage cases, with segmentation of affected areas providing detailed images for further analysis. This study explores the application of a novel mathematical technique, continuum topological derivative (CTD), for CT and MR image segmentation.</p></div><div><h3>Methods</h3><p>The initial stage of Continuum Topological Derivative (CTD) segmentation involves preprocessing CT and MR images due to their susceptibility to inherent noises, such as quantum mottle, and Gaussian and Rayleigh noises, respectively. In this study, we have implemented the CTD denoising algorithm to produce denoised CT/MR images, serving as ground truth for subsequent segmentation steps. Validation of the denoised CTD CT/MR images was conducted through minimal residual value computation across all case studies. Following this, segmentation of the region of interest was performed using the CTD technique, with comparisons made against Discrete Topological Derivatives (DTD), k-mean clustering and Adaptive Threshold methods. Evaluation of the proposed CTD algorithm's effectiveness in segmentation involved calculating performance metrics such as Jaccard and dice indices to assess spatial overlap of segmented images.</p></div><div><h3>Results</h3><p>The CTD technique yields excellent segmentation results, not only for the delineated region of interest but also for volume-based cerebral blood areas and anomalies in the middle cerebral artery (MCA) and its territorial areas, which are substantiated through performance metrics and visual inspection by trained radiologist. This aids in determining the severity of stroke in affected patients. Additionally, a unique attempt is made to apply CTD to Electrical Impedance Tomography (EIT) images of the lungs for precise estimation of the breathing cycle. CTD successfully generates standardized images, demonstrating attenuation and density characteristics for cerebral cisterns, arteries, and ventricles.</p></div><div><h3>Discussion</h3><p>The denoised images obtained through CTD facilitate thorough analysis of both normal and pathological conditions, providing radiologists with enhanced capa
导言计算机断层扫描(CT)和磁共振成像(MRI)是揭示解剖和组织特性的重要工具,尤其是在头部和脑部。CT 可提供高对比度图像,在脑出血等情况下尤为重要,还有助于估计颅骨畸形和器官形状偏差。另一方面,核磁共振成像可提供出色的脑动脉区域成像,通过不同的序列分析各种脑部病变。除了检测常见的头部和脑部疾病外,这些模式还在识别眼眶、大脑中动脉区域、脑室、软组织和骨骼的异常方面发挥着重要作用。脑部核磁共振成像的独特之处在于它能够进行多平面脑部评估。头部/脑部 CT 和核磁共振成像对研究出血病例非常有价值,对受影响区域的分割可提供详细的图像供进一步分析。方法由于 CT 和 MR 图像容易受到量子斑纹、高斯和瑞利噪声等固有噪声的影响,因此 CT 和 MR 图像分割的初始阶段需要对 CT 和 MR 图像进行预处理。在这项研究中,我们采用 CTD 去噪算法生成去噪 CT/MR 图像,作为后续分割步骤的基本真相。通过计算所有案例研究的最小残值,对去噪 CTD CT/MR 图像进行了验证。之后,使用 CTD 技术对感兴趣区进行分割,并与离散拓扑衍生物 (DTD)、k-均值聚类和自适应阈值方法进行比较。结果 CTD 技术不仅对划定的感兴趣区,而且对基于容积的脑血区域和大脑中动脉 (MCA) 及其区域的异常都产生了出色的分割结果,这些结果通过性能指标和训练有素的放射科医生的目视检查得到了证实。这有助于确定受影响患者的中风严重程度。此外,还进行了一次独特的尝试,将 CTD 应用于肺部电阻抗断层扫描(EIT)图像,以精确估计呼吸周期。讨论通过 CTD 获得的去噪图像有助于全面分析正常和病理情况,为放射科医生提供了更强的能力来识别微妙的细节,尤其是在异常脑动脉区域、出血病例、脑室、脑室和动脉等区域。研究结果清楚地表明,CTD 去噪和分割相结合的方法在划定病变或受影响区域的效率和准确性方面均优于其他三种已确立的方法,本研究中进行的各种案例研究也证明了这一点。总之,所提出的 CTD 方法旨在划定感兴趣区域的边界和轮廓,便于精确估计大小和形状,从而准确检测病变或受影响区域的范围。
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引用次数: 0
FreeSurfer version-shuffling can enhance brain age predictions FreeSurfer 版本洗牌可提高脑龄预测能力
Q4 Neuroscience Pub Date : 2024-07-16 DOI: 10.1016/j.ynirp.2024.100214
Max Korbmacher , Lars T. Westlye , Ivan I. Maximov
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引用次数: 0
Cortical thickness differences between hearing and perinatally deaf cats using ultra-high field MRI 利用超高磁场核磁共振成像分析听力猫和围产期耳聋猫的皮质厚度差异
Q4 Neuroscience Pub Date : 2024-07-03 DOI: 10.1016/j.ynirp.2024.100213
Stephen G. Gordon , Alessandra Sacco , Stephen G. Lomber

In the absence of hearing, the plastic nature of the cerebral cortex allows select regions to be repurposed to serve the processing of remaining sensory modalities. This plasticity can be observed in many ways, including measuring the thickness differences of cortical gray matter between hearing and deaf populations to detect regional adaptations. In this study, T1-weighted images were acquired for hearing (n = 38) and perinatally-deafened (n = 31) cats using an ultra-high field 7T MRI scanner to identify normative feline cortical thickness, as well as areas of differing thickness between groups. Most significant changes to sensory-related regions demonstrated thicker cortices in the deaf compared to the hearing group, while specific non-sensory regions were found to be thinner. Furthermore, there was a modest lateralized component, finding that the gray matter of the left hemisphere was more susceptible to thickness changes following auditory deprivation. These results suggest distinct factors driving the adaptations in sensory versus non-sensory cortices in the brain following deafness, and reinforces the task-retainment model of crossmodal plasticity.

在听力缺失的情况下,大脑皮层的可塑性使选定的区域能够重新用于处理其余的感觉模式。这种可塑性可以通过多种方式观察到,包括测量听力人群和耳聋人群大脑皮层灰质的厚度差异,以检测区域适应性。在这项研究中,我们使用超高磁场 7T 磁共振成像扫描仪采集了听力猫(38 只)和围产期耳聋猫(31 只)的 T1 加权图像,以确定猫皮层厚度的标准值以及组间厚度不同的区域。与听力组相比,聋猫感觉相关区域的皮层厚度变化最为明显,而特定的非感觉区域则较薄。此外,听觉剥夺后,左半球的灰质更容易受到厚度变化的影响。这些结果表明,耳聋后大脑感觉皮层和非感觉皮层的适应性有不同的驱动因素,并加强了跨模态可塑性的任务保持模型。
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引用次数: 0
Get ready! High urgency reduces beta band cortico-muscular coherence during motor preparation 做好准备高度紧迫性会降低运动准备过程中β带皮质-肌肉的一致性
Q4 Neuroscience Pub Date : 2024-06-30 DOI: 10.1016/j.ynirp.2024.100212
Welber Marinovic , Reon Boyd , An Nguyen

Motor preparation is a dynamic process that is tuned to task demands such as urgency. This study examined the effect of urgency to move on cortico-muscular coherence (CMC) in the beta frequency band during motor preparation. Participants (n = 25) prepared for a rapid wrist flexion movement under two distinct scenarios: high (350 ms to prepare) and low (1400 ms to prepare) urgency. Before participants performed the ballistic actions, they were required to hold a light contraction of the flexor carpi radialis muscle for 3 s. During this holding time, we simultaneously obtained EEG and EMG signals to estimate their coherence —a measure of how much brain and muscle activity is synchronized at specific rhythms— over the last 1 s of the contraction interval.

Contrary to our hypothesis, we found greater CMC in conditions of low urgency rather than high urgency. This finding suggests that participants prioritized attending to the visual stimuli, dividing their attention to capture the preparation go-signal, rather than preparing the motor system, leading to a reduction in CMC. This interpretation suggests a cognitive-motor trade-off, wherein attentional resources are allocated more to sensory processing that to motor preparedness in urgent situations.

运动准备是一个动态过程,会根据任务要求(如紧迫性)进行调整。本研究考察了在运动准备过程中,移动的紧迫性对β频段皮质-肌肉一致性(CMC)的影响。参与者(n = 25)在两种不同的情况下准备快速屈腕运动:高紧迫性(350 毫秒准备时间)和低紧迫性(1400 毫秒准备时间)。在这段时间内,我们同时获得了脑电图和肌电图信号,以估计它们在收缩间歇的最后 1 秒钟内的一致性--这是衡量大脑和肌肉活动在特定节奏下同步程度的一种方法。与我们的假设相反,我们发现在低紧迫性条件下,CMC 比高紧迫性条件下更大。这一发现表明,参与者优先注意视觉刺激,将注意力分散到捕捉准备开始信号上,而不是准备运动系统,从而导致 CMC 下降。这种解释说明了认知与运动之间的权衡,即在紧急情况下,注意力资源更多地被分配到感官处理上,而不是运动准备上。
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引用次数: 0
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