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Spontaneous bilayer wrapping of virus particles by a phospholipid Langmuir monolayer 磷脂朗缪尔单层对病毒颗粒的自发双层包裹。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-12-05 DOI: 10.1140/epje/s10189-023-00366-8
J. F. Torres-Salgado, M. V. Villagrana-Escareño, A. L. Duran-Meza, X. F. Segovia-Gonzalez, R. D. Cadena-Nava, W. M. Gelbart, C. M. Knobler, J. Ruiz-García

We report here the spontaneous formation of lipid-bilayer-wrapped virus particles, following the injection of “naked” virus particles into the subphase of a Langmuir trough with a liquid monolayer of lipids at its air–water interface. The virus particles are those of the well-studied cowpea chlorotic mottle virus, CCMV, which are negatively charged at the pH 6 of the subphase; the lipids are a 9:1 mix of neutral DMPC and cationic CTAB molecules. Before adding CCMV particles to the subphase we establish the mixed lipid monolayer in its liquid-expanded state at a fixed pressure (17.5 mN/m) and average area-per-molecule of (41Å2). Keeping the total area fixed, the surface pressure is observed to decrease at about 15 h after adding the virus particles in the subphase; by 37 h it has dropped to zero, corresponding to essentially all the lipid molecules having been removed from the air–water interface. By collecting particles from the subphase and measuring their sizes by atomic force microscopy, we show that the virus particles have been wrapped by lipid bilayers (or by two lipid bilayers). These results can be understood in terms of thermal fluctuations and electrostatic interactions driving the wrapping of the anionic virus particles by the cationic lipids.

Graphical Abstract

Spontaneous acquisition by a virus particle of, first, a hydrophobic lipid monolayer envelope and, then, a hydrophilic lipid bilayer envelope, as it interacts from the subphase with an oppositely charged Langmuir monolayer

我们在此报告了将 "裸体 "病毒颗粒注入空气-水界面上有液态单层脂质的朗缪尔槽底相后,自发形成的脂质双层包裹病毒颗粒。病毒颗粒是经过充分研究的豇豆萎黄斑驳病毒(CCMV)的颗粒,在亚相的 pH 值为 6 时带负电荷;脂质是由中性 DMPC 和阳离子 CTAB 分子按 9:1 的比例混合而成。在将 CCMV 颗粒加入亚相之前,我们在固定压力(17.5 mN/m)和平均每分子面积(41Å2)下建立了液态膨胀状态的混合脂质单层。在总面积固定的情况下,观察到表面压力在子相中加入病毒颗粒约 15 小时后开始下降;37 小时后降至零,这与空气-水界面上的所有脂质分子基本被清除相对应。通过从子相中收集颗粒并用原子力显微镜测量其大小,我们发现病毒颗粒已被脂质双分子层(或两层脂质双分子层)包裹。这些结果可以从热波动和静电作用的角度来理解,热波动和静电作用促使阴离子病毒粒子被阳离子脂质包裹。当病毒粒子从亚相与带相反电荷的朗缪尔单层相互作用时,首先自发获得疏水性脂质单层包膜,然后获得亲水性脂质双分子层包膜。
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引用次数: 0
Effective interactions and phase behavior of protein solutions in the presence of hexamine cobalt(III) chloride 蛋白质溶液在六胺氯化钴(III)存在下的有效相互作用和相行为。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-12-05 DOI: 10.1140/epje/s10189-023-00376-6
Maximilian D. Senft, Ralph Maier, Anusha Hiremath, Fajun Zhang, Frank Schreiber

It is well established that deoxyribonucleic acid (DNA) and ribonucleic acid (RNA) exhibit a reentrant condensation (RC) phase behavior in the presence of the trivalent hexamine cobalt(III) cations (Hac) which can be important for their packing and folding. A similar behavior can be observed for negatively charged globular proteins in the presence of trivalent metal cations, such as Y3+ or La3+. This phase behavior is mainly driven by charge inversion upon an increasing salt concentration for a fixed protein concentration (cp). However, as Hac exhibits structural differences compared to other multivalent metal cations, with six ammonia ligands (NH3) covalently bonded to the central cobalt atom, it is not clear that Hac can induce a similar phase behavior for proteins. In this work, we systematically investigate whether negatively charged globular proteins β-lactoglobulin (BLG), bovine serum albumin (BSA), human serum albumin (HSA) and ovalbumin (OVA) feature Hac-induced RC. Effective protein–protein interactions were investigated by small-angle X-ray scattering. The reduced second virial coefficient (B2/B2HS) was obtained as a function of salt concentration. The virial coefficient analysis performed confirms the reentrant interaction (RI) behavior for BLG without actually inducing RC, given the insufficient strengths of the interactions for the latter to occur. In contrast, the strength of attraction for BSA, HSA and OVA are too weak to show RC. Model free analysis of the inverse intensity (1/Ileft( {q to 0} right)) also supports this finding. Looking at different q-range by employing static (SLS) and dynamic light scattering experiments, the presence of RI behavior can be confirmed. The results are further discussed in view of metal cation binding sites in nucleic acids (DNA and RNA), where Hac induced RC phase behavior.

Graphical abstract

众所周知,脱氧核糖核酸(DNA)和核糖核酸(RNA)在三价六胺钴(III)阳离子(Hac)的作用下会出现重入凝结(RC)相,这对它们的堆积和折叠非常重要。带负电荷的球状蛋白质在三价金属阳离子(如 Y3+ 或 La3+)存在时也会出现类似的行为。在蛋白质浓度(cp)固定的情况下,这种相行为主要是由盐浓度增加时的电荷反转驱动的。然而,与其他多价金属阳离子相比,Hac 的结构有所不同,它有六个氨配体(NH3)与中心钴原子共价键合,因此目前还不清楚 Hac 是否能诱导蛋白质产生类似的相行为。在这项工作中,我们系统地研究了带负电荷的球蛋白β-乳球蛋白(BLG)、牛血清白蛋白(BSA)、人血清白蛋白(HSA)和卵清蛋白(OVA)是否具有 Hac 诱导的 RC 特征。通过小角 X 射线散射研究了蛋白质与蛋白质之间的有效相互作用。得出了盐浓度与还原第二病毒系数(B2/B2HS)的函数关系。所进行的病毒系数分析证实了 BLG 的重入相互作用(RI)行为,但实际上并没有诱发 RC,因为相互作用的强度不足以发生 RC。相比之下,BSA、HSA 和 OVA 的吸引力太弱,无法显示 RC。对反向强度的无模型分析[公式:见正文]也支持这一结论。通过静态(SLS)和动态光散射实验观察不同的 q 范围,可以证实 RI 行为的存在。我们还进一步讨论了核酸(DNA 和 RNA)中的金属阳离子结合位点,其中 Hac 诱导了 RC 相行为。
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引用次数: 0
Chilling alcohol on the computer: isothermal compressibility and the formation of hydrogen-bond clusters in liquid propan-1-ol 在计算机上冷却酒精:等温压缩性和液态丙烷-1-醇中氢键团簇的形成。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-11-29 DOI: 10.1140/epje/s10189-023-00380-w
Luis A. Baptista, Mauricio Sevilla, Manfred Wagner, Kurt Kremer, Robinson Cortes-Huerto

Molecular dynamics simulations have been performed to compute the isothermal compressibility (kappa _T) of liquid propan-1-ol in the temperature range (200 le Tle 300) K. A change in behaviour, from normal (high T) to anomalous (low T), has been identified for (kappa _T) at (210<T<230) K. The average number of hydrogen bonds (H–bond) per molecule turns to saturation in the same temperature interval, suggesting the formation of a relatively rigid network. Indeed, simulation results show a strong tendency to form H–bond clusters with distinct boundaries, with the average largest size and width of the size distribution growing upon decreasing temperature, in agreement with previous theoretical and experimental studies. These results also emphasise a connection between the behaviour of (kappa _T) and the formation of nanometric structures.

已经进行了分子动力学模拟,以计算液体丙烷-1-醇在温度范围内的等温压缩性[公式:见文]k。[公式:见文]k的行为变化,从正常(高T)到异常(低T),已经确定[公式:见文]k。在相同的温度区间内,每个分子的氢键(h键)的平均数量变为饱和,表明形成了一个相对刚性的网络。模拟结果表明,氢键团簇具有明显边界的形成趋势,平均最大尺寸和尺寸分布宽度随温度的降低而增大,这与前人的理论和实验研究结果一致。这些结果还强调了[公式:见文本]的行为与纳米结构形成之间的联系。
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引用次数: 0
Electrostatic interactions between charge regulated spherical macroions 电荷调节球形巨离子之间的静电相互作用。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-11-29 DOI: 10.1140/epje/s10189-023-00373-9
Hu Ruixuan, Arghya Majee, Jure Dobnikar, Rudolf Podgornik

We study the interaction between two charge regulating spherical macroions with dielectric interior and dissociable surface groups immersed in a monovalent electrolyte solution. The charge dissociation is modelled via the Frumkin-Fowler-Guggenheim isotherm, which allows for multiple adsorption equilibrium states. The interactions are derived from the solutions of the mean-field Poisson-Boltzmann type theory with charge regulation boundary conditions. For a range of conditions we find symmetry breaking transitions from symmetric to asymmetric charge distribution exhibiting annealed charge patchiness, which results in like-charge attraction even in a univalent electrolyte—thus fundamentally modifying the nature of electrostatic interactions in charge-stabilized colloidal suspensions.

研究了两个带介电内部和可解离表面基团的电荷调节球形巨离子在一价电解质溶液中的相互作用。电荷解离是通过Frumkin-Fowler-Guggenheim等温线模拟的,该等温线允许多种吸附平衡状态。这些相互作用由带电荷调节边界条件的平均场泊松-玻尔兹曼型理论的解导出。在一系列条件下,我们发现从对称电荷分布到不对称电荷分布的对称破缺转变表现出退火电荷斑块,即使在单价电解质中也会导致类似电荷吸引,从而从根本上改变电荷稳定胶体悬浮液中静电相互作用的性质。
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引用次数: 1
Surface tension between liquids containing antagonistic and regular salts 含有对抗性盐和常规盐的液体之间的表面张力。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-11-29 DOI: 10.1140/epje/s10189-023-00378-4
Roni Kroll, Moshe Gottlieb, Yoav Tsori

We investigate theoretically the surface tension between two immiscible liquids containing antagonistic and regular salts. The mean-field model includes the electrostatic energy and the Gibbs transfer energy of the ions. We find the Donnan potential difference between the liquids and solve the Poisson–Boltzmann equation to calculate the potential and ion density profiles. When the liquids contain only a regular salt, the surface tension increases when compared to the no-salt case; in contrast, the surface tension is reduced when they contain only an antagonistic salt. When both salts are present, the surface tension can either further decrease or increase depending on the preferential solvation of the ions, in agreement with published experimental observations.

我们从理论上研究了两种不混溶液体之间的表面张力。平均场模型包括离子的静电能和吉布斯转移能。我们找到了液体之间的Donnan电位差,并求解泊松-玻尔兹曼方程来计算电位和离子密度分布。当液体中只含有一种普通的盐时,表面张力比不含盐的情况下增加;相反,当它们只含有拮抗盐时,表面张力降低。当两种盐都存在时,表面张力可以进一步降低或增加,这取决于离子的优先溶剂化,与已发表的实验观察一致。
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引用次数: 0
MFG-E8: a model of multiple binding modes associated with ps-binding proteins MFG-E8:与ps结合蛋白相关的多种结合模式的模型。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-11-24 DOI: 10.1140/epje/s10189-023-00372-w
Tiffany Suwatthee, Daniel Kerr, Sofiya Maltseva, Charles L. Dulberger, Luke Hyeondo Hwang, Benjamin R. Slaw, Wei Bu, Binhua Lin, Erin J. Adams, Ka Yee C. Lee

Membrane-binding proteins often associate with lipid membranes through a singular binding interface which is generally modeled as a two-state system: bound or unbound. However, even a single interface can engage with more than one mode of binding since a variety of interactions can contribute to the binding event. Unfortunately, the ability to clearly delineate the different binding modes of a singular binding interface has been elusive with existing models. Here, we present a study on milk fat globule EGF factor 8 (MFG-E8), which belongs to a class of proteins that identifies and binds phosphatidylserine (PS). These proteins detect membrane dysregulation implicated in exposed PS in apoptosis and malignant cells. In order to elucidate the factors affecting the binding of MFG-E8, we used a model system consisting of a series of lipid vesicles with varying PS mole fraction to identify the sensitivity of MFG-E8’s binding affinity to changes in electrostatics using a tryptophan fluorescence spectral shift assay. Using a newly developed model, we experimentally identified three binding modes, each associated with a different number of PS lipids, with its cooperativity for binding being enhanced by the availability of negatively charged lipids. X-ray reflectivity experiments additionally suggest that MFG-E8’s binding modes are influenced by membrane packing. The protocols established for elucidating MFG-E8’s interaction with lipid membranes under different membrane conditions can be applied to the study of other membrane-binding proteins that target specific membrane attributes, such as fluidity and electrostatics, and help elucidate these membrane targeting mechanisms and their subsequent binding events.

Graphical abstract

膜结合蛋白通常通过单一的结合界面与脂质膜结合,这种结合界面通常被建模为两种状态系统:结合或未结合。然而,即使是单个接口也可以使用多种绑定模式,因为各种交互都可能导致绑定事件。不幸的是,现有的模型无法清晰地描述单一绑定接口的不同绑定模式。在这里,我们提出了一项关于乳脂球EGF因子8 (MFG-E8)的研究,它属于一类识别和结合磷脂酰丝氨酸(PS)的蛋白质。这些蛋白检测与暴露于凋亡和恶性细胞的PS有关的膜失调。为了阐明影响MFG-E8结合的因素,我们使用了一个由一系列具有不同PS摩尔分数的脂质囊泡组成的模型系统,使用色氨酸荧光光谱位移法确定MFG-E8的结合亲和力对静电变化的敏感性。使用一个新开发的模型,我们通过实验确定了三种结合模式,每种模式都与不同数量的PS脂质相关,其结合的协同性被带负电荷的脂质的可用性增强。x射线反射率实验还表明MFG-E8的结合模式受膜填料的影响。为阐明MFG-E8在不同膜条件下与脂质膜的相互作用而建立的协议可以应用于研究其他针对特定膜属性(如流动性和静电)的膜结合蛋白,并有助于阐明这些膜靶向机制及其随后的结合事件。
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引用次数: 0
Drying behaviour of nanofluid sessile droplets on self-affine vis-à-vis corrugated nanorough surfaces 纳米流体固结液滴在自仿射可见-à-vis波纹纳米表面上的干燥行为。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-11-24 DOI: 10.1140/epje/s10189-023-00374-8
Deeksha Rani, Subhendu Sarkar

In recent years, evaporative self-assembly of sessile droplets has gained considerable attention owing to its wide applicability in many areas. While the phenomenon is well studied for smooth and isotropically rough (self-affine) surfaces, investigations comparing the outcomes on self-affine vis-à-vis corrugated surfaces remains to be done. In this experimental work, we compare the wetting and evaporation dynamics of nano-colloidal microlitre droplets on self-affine and corrugated nanorough surfaces having identical roughnesses and interface properties. The coupled influence of particle size, concentration, and surface structuring has been explored. Differences in wettability and evaporation dynamics are observed, which are explained via the interaction between wetting fluid and anisotropic surface roughness. Our findings exhibit different temporal behaviour of contact radius and angle in the evaporation process of the droplets. Further, the corrugated surface exhibits anisotropic wettability with a monotonic change in droplet shape as evaporation proceeds, finally giving rise to irregular dried patterns. The scaled rim width and crack spacing of the particulate deposits are examined. Our results can inspire fabrication of surfaces that can facilitate direction-dependent droplet motion for specific applications.

近年来,无固定液滴的蒸发自组装由于其在许多领域的广泛应用而受到了广泛的关注。虽然对光滑和各向同性粗糙(自仿射)表面的这种现象进行了很好的研究,但对自仿射与-à-vis波纹表面的结果进行比较的研究仍有待完成。在这项实验工作中,我们比较了纳米胶体微升液滴在具有相同粗糙度和界面特性的自仿射和波纹纳米表面上的润湿和蒸发动力学。研究了粒径、浓度和表面结构的耦合影响。观察到润湿性和蒸发动力学的差异,这可以通过润湿性流体和各向异性表面粗糙度之间的相互作用来解释。我们的研究结果显示了液滴蒸发过程中接触半径和角度的不同时间行为。此外,波纹表面表现出各向异性润湿性,随着蒸发的进行,液滴形状单调变化,最终产生不规则的干燥图案。研究了颗粒沉积的尺度边缘宽度和裂纹间距。我们的结果可以激发表面的制造,可以促进特定应用的方向依赖液滴运动。
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引用次数: 0
Foam drainage equation in fractal dimensions: breaking and instabilities 分形维数的泡沫排水方程:破碎与不稳定。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-11-13 DOI: 10.1140/epje/s10189-023-00368-6
Rami Ahmad El-Nabulsi, Waranont Anukool

This paper is concerned with the construction of a phenomenological model for drainage of a liquid in foam in fractal dimensions. Our model is based on the concepts of “product-like fractal measure” introduced to model dynamics in porous media and “complex fractional transform” which converts a fractal space on a small scale to a smooth space with a large scale. The solution of the fractal foam drainage equation has been approximated using the He’s homotopy perturbation method. Qualitative analysis shows that the behavior of the solitonic wave in fractal dimensions differ from the behavior in integer dimensions. This deformation generates instabilities in the foam dynamics, dispersion and spontaneous breaking of the solitonic wave.

Graphical abstract

本文讨论了分形维数泡沫中液体排水的现象学模型的建立。我们的模型是基于引入多孔介质动力学模型的“类积分形测度”和将小尺度分形空间转化为大尺度光滑空间的“复分数变换”的概念。用贺氏同伦摄动法对分形泡沫排水方程的解进行了近似。定性分析表明,孤子波在分形维数中的行为不同于在整数维数中的行为。这种变形在泡沫动力学、色散和孤子波的自发破断中产生不稳定性。
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引用次数: 2
Lift at low Reynolds number 低雷诺数时的升力。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-11-13 DOI: 10.1140/epje/s10189-023-00369-5
Lionel Bureau, Gwennou Coupier, Thomas Salez

Lift forces are widespread in hydrodynamics. These are typically observed for big and fast objects and are often associated with a combination of fluid inertia (i.e. large Reynolds numbers) and specific symmetry-breaking mechanisms. In contrast, the properties of viscosity-dominated (i.e. low Reynolds numbers) flows make it more difficult for such lift forces to emerge. However, the inclusion of boundary effects qualitatively changes this picture. Indeed, in the context of soft and biological matter, recent studies have revealed the emergence of novel lift forces generated by boundary softness, flow gradients and/or surface charges. The aim of the present review is to gather and analyse this corpus of literature, in order to identify and unify the questioning within the associated communities, and pave the way towards future research.

升力在流体力学中广泛存在。这些通常是在大而快的物体上观察到的,并且通常与流体惯性(即大雷诺数)和特定对称性破缺机制的组合有关。相反,粘度主导(即低雷诺数)流动的特性使得这种升力更难以出现。然而,边界效应的加入从本质上改变了这一图景。事实上,在软质和生物物质的背景下,最近的研究揭示了由边界柔软性、流动梯度和/或表面电荷产生的新型升力的出现。本综述的目的是收集和分析这些文献语料库,以便识别和统一相关社区中的问题,并为未来的研究铺平道路。
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引用次数: 1
D11 and small angle neutron scattering: a paradigm of ILL D11和小角中子散射:一种惯性散射模式。
IF 1.8 4区 物理与天体物理 Q3 Chemistry Pub Date : 2023-11-13 DOI: 10.1140/epje/s10189-023-00362-y
John White

This paper describes some of the early events in the 50 year success of D11. That, and the Institut Laue Langevin are linked by an attitude that embraces both instrument renewal and new areas of science. The neutron sources proved to be reliable and serviceable, the neutron guides and guide hall have been a great benefit, and the user concept has led to a strengthening international community of diverse and good science and to new instruments clamouring for funding in a growing facility. Designs were perfected and the second wind (Deuxième Souffle) funded the outflow from which a second strong phase has evolved.

Graphical Abstract

本文描述了D11 50年成功中的一些早期事件。这一点和朗格万研究所是由一种态度联系在一起的,这种态度既拥抱仪器更新,也拥抱新的科学领域。中子源被证明是可靠的和可使用的,中子导管和导管大厅带来了巨大的好处,用户概念导致了多样化和良好科学的国际社会的加强,以及在不断增长的设施中迫切需要资金的新仪器。设计得到完善,第二次风(deuxi舒芙勒me Souffle)为第二个强劲阶段的发展提供了资金。
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引用次数: 0
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The European Physical Journal E
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