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Ultrafast Imaging of Molecules with Electron Diffraction. 电子衍射分子的超快成像。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2021-11-11 DOI: 10.1146/annurev-physchem-082720-010539
Martin Centurion, Thomas J A Wolf, Jie Yang

Photoexcited molecules convert light into chemical and mechanical energy through changes in electronic and nuclear structure that take place on femtosecond timescales. Gas phase ultrafast electron diffraction (GUED) is an ideal tool to probe the nuclear geometry evolution of the molecules and complements spectroscopic methods that are mostly sensitive to the electronic state. GUED is a weak and passive probing tool that does not alter the molecular properties during the probing process and is sensitive to the spatial distribution of charge in the molecule, including both electrons and nuclei. Improvements in temporal resolution have enabled GUED to capture coherent nuclear motions in molecules in the excited and ground electronic states with femtosecond and subangstrom resolution. Here we present the basic theory of GUED and explain what information is encoded in the diffraction signal, review how GUED has been used to observe coherent structural dynamics in recent experiments, and discuss the advantages and limitations of the method.

光激发态分子通过在飞秒时间尺度上发生的电子和核结构变化,将光转化为化学能和机械能。气相超快电子衍射是探测分子核几何演化的理想工具,是对电子态敏感的光谱方法的补充。它是一种弱的被动探测工具,在探测过程中不改变分子的性质,对分子中电荷的空间分布很敏感,包括电子和原子核。时间分辨率的提高使量子计算机能够以飞秒和亚埃的分辨率捕捉激发态和基态分子中的相干核运动。本文介绍了该方法的基本理论,解释了衍射信号中编码的信息,回顾了近年来该方法在观察相干结构动力学中的应用,并讨论了该方法的优点和局限性。
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引用次数: 11
Molecular Polaritonics: Chemical Dynamics Under Strong Light-Matter Coupling. 分子极化电子学:强光-物质耦合下的化学动力学。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2021-12-06 DOI: 10.1146/annurev-physchem-090519-042621
Tao E Li, Bingyu Cui, Joseph E Subotnik, Abraham Nitzan

Chemical manifestations of strong light-matter coupling have recently been a subject of intense experimental and theoretical studies. Here we review the present status of this field. Section 1 is an introduction to molecular polaritonics and to collective response aspects of light-matter interactions. Section 2 provides an overview of the key experimental observations of these effects, while Section 3 describes our current theoretical understanding of the effect of strong light-matter coupling on chemical dynamics. A brief outline of applications to energy conversion processes is given in Section 4. Pending technical issues in the construction of theoretical approaches are briefly described in Section 5. Finally, the summary in Section 6 outlines the paths ahead in this exciting endeavor.

强光-物质耦合的化学表现是近年来实验和理论研究的热点。本文综述了该领域的研究现状。第1节介绍分子极化电子学和光物质相互作用的集体响应方面。第2节概述了这些效应的关键实验观察,而第3节描述了我们目前对强光-物质耦合对化学动力学影响的理论理解。第4节简要概述了在能量转换过程中的应用。在第5节中简要描述了理论方法构建中有待解决的技术问题。最后,第6节的总结概述了这一激动人心的努力的前进道路。
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引用次数: 68
Quantitative Surface-Enhanced Spectroscopy. 定量表面增强光谱学。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2021-12-22 DOI: 10.1146/annurev-physchem-082720-033751
Ryan D Norton, Hoa T Phan, Stephanie N Gibbons, Amanda J Haes

Surface-enhanced Raman scattering (SERS), a powerful technique for trace molecular detection, depends on chemical and electromagnetic enhancements. While recent advances in instrumentation and substrate design have expanded the utility, reproducibility, and quantitative capabilities of SERS, some challenges persist. In this review, advances in quantitative SERS detection are discussed as they relate to intermolecular interactions, surface selection rules, and target molecule solubility and accessibility. After a brief introduction to Raman scattering and SERS, impacts of surface selection rules and enhancement mechanisms are discussed as they relate to the observation of activation and deactivation of normal Raman modes in SERS. Next, experimental conditions that can be used to tune molecular affinity to and density near SERS substrates are summarized and considered while tuning these parameters is conveyed. Finally, successful examples of quantitative SERS detection are discussed, and future opportunities are outlined.

表面增强拉曼散射(SERS)是一种强大的痕量分子检测技术,它依赖于化学和电磁增强。虽然仪器和衬底设计的最新进展扩大了SERS的实用性、再现性和定量能力,但仍然存在一些挑战。本文综述了定量SERS检测在分子间相互作用、表面选择规则、靶分子溶解度和可及性等方面的研究进展。在简要介绍了拉曼散射和SERS之后,讨论了表面选择规则和增强机制的影响,因为它们与SERS中正常拉曼模式激活和失活的观察有关。接下来,总结了可用于调整SERS底物附近分子亲和力和密度的实验条件,并在调整这些参数时进行了考虑。最后,讨论了定量SERS检测的成功案例,并概述了未来的机会。
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引用次数: 12
Classical and Nonclassical Nucleation and Growth Mechanisms for Nanoparticle Formation. 纳米颗粒形成的经典和非经典成核和生长机制。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2022-02-03 DOI: 10.1146/annurev-physchem-082720-100947
Young-Shin Jun, Yaguang Zhu, Ying Wang, Deoukchen Ghim, Xuanhao Wu, Doyoon Kim, Haesung Jung

All solid materials are created via nucleation. In this evolutionary process, nuclei form in solution or at interfaces, expand by monomeric growth and oriented attachment, and undergo phase transformation. Nucleation determines the location and size of nuclei, whereas growth controls the size, shape, and aggregation of newly formed nanoparticles. These physical properties of nanoparticles can affect their functionalities, reactivities, and porosities, as well as their fate and transport. Recent advances in nanoscale analytical technologies allow in situ real-time observations, enabling us to uncover the molecular nature of nuclei and the critical controlling factors for nucleation and growth. Although a single theory cannot yet fully explain such evolving processes, we have started to better understand how both classical andnonclassical theories can work together, and we have begun to recognize the importance of connecting these theories. This review discusses the recent convergence of knowledge about the nucleation and growth of nanoparticles.

所有固体物质都是通过成核形成的。在这一演化过程中,核在溶液中或界面处形成,通过单体生长和取向附着而膨胀,并发生相变。成核决定了核的位置和大小,而生长控制了新形成的纳米颗粒的大小、形状和聚集。纳米颗粒的这些物理性质会影响它们的功能、反应性和孔隙率,以及它们的命运和运输。纳米级分析技术的最新进展允许在现场实时观察,使我们能够揭示原子核的分子性质和成核和生长的关键控制因素。尽管一个单一的理论还不能完全解释这样的演变过程,我们已经开始更好地理解经典和非经典理论是如何一起工作的,我们已经开始认识到将这些理论联系起来的重要性。本文综述了纳米颗粒成核和生长的最新进展。
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引用次数: 26
Capturing Atom-Specific Electronic Structural Dynamics of Transition-Metal Complexes with Ultrafast Soft X-Ray Spectroscopy. 用超快软x射线光谱捕捉过渡金属配合物的原子特异性电子结构动力学。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2022-01-05 DOI: 10.1146/annurev-physchem-082820-020236
Raphael M Jay, Kristjan Kunnus, Philippe Wernet, Kelly J Gaffney

The atomic specificity of X-ray spectroscopies provides a distinct perspective on molecular electronic structure. For 3d metal coordination and organometallic complexes, the combination of metal- and ligand-specific X-ray spectroscopies directly interrogates metal-ligand covalency-the hybridization of metal and ligand electronic states. Resonant inelastic X-ray scattering (RIXS), the X-ray analog of resonance Raman scattering, provides access to all classes of valence excited states in transition-metal complexes, making it a particularly powerful means of characterizing the valence electronic structure of 3d metal complexes. Recent advances in X-ray free-electron laser sources have enabled RIXS to be extended to the ultrafast time domain. We review RIXS studies of two archetypical photochemical processes: charge-transfer excitation in ferricyanide and ligand photodissociation in iron pentacarbonyl. These studies demonstratefemtosecond-resolution RIXS can directly characterize the time-evolving electronic structure, including the evolution of the metal-ligand covalency.

x射线光谱的原子特异性为分子电子结构提供了一个独特的视角。对于三维金属配位和有机金属配合物,金属和配体特异性x射线光谱的组合直接询问金属-配体共价-金属和配体电子态的杂化。共振非弹性x射线散射(RIXS),共振拉曼散射的x射线模拟,提供了过渡金属配合物中所有类别的价电子激发态,使其成为表征三维金属配合物价电子结构的一种特别强大的手段。x射线自由电子激光源的最新进展使RIXS能够扩展到超快时域。本文综述了两种典型光化学过程的RIXS研究:铁氰化物中的电荷转移激发和五羰基铁中的配体光解离。这些研究表明,飞秒分辨率的RIXS可以直接表征随时间变化的电子结构,包括金属-配体共价的演变。
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引用次数: 4
eScience Infrastructures in Physical Chemistry. 物理化学基础设施。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2021-12-09 DOI: 10.1146/annurev-physchem-082120-041521
Samantha Kanza, Cerys Willoughby, Colin Leonard Bird, Jeremy Graham Frey

As the volume of data associated with scientific research has exploded over recent years, the use of digital infrastructures to support this research and the data underpinning it has increased significantly. Physical chemists have been making use of eScience infrastructures since their conception, but in the last five years their usage has increased even more. While these infrastructures have not greatly affected the chemistry itself, they have in some cases had a significant impact on how the research is undertaken. The combination of the human effort of collaboration to create open source software tools and semantic resources, the increased availability of hardware for the laboratories, and the range of data management tools available has made the life of a physical chemist significantly easier. This review considers the different aspects of eScience infrastructures and explores how they have improved the way in which we can conduct physical chemistry research.

近年来,随着与科学研究相关的数据量爆炸式增长,使用数字基础设施来支持这项研究和支撑它的数据的情况显著增加。物理化学家从他们的概念开始就一直在使用eScience基础设施,但在过去的五年中,他们的使用增加了更多。虽然这些基础设施对化学本身没有太大影响,但在某些情况下,它们对研究的进行方式产生了重大影响。创建开源软件工具和语义资源的人工协作、实验室硬件可用性的增加以及可用的数据管理工具的范围的结合,使物理化学家的生活变得更加轻松。这篇综述考虑了eScience基础设施的不同方面,并探讨了它们如何改进我们进行物理化学研究的方式。
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引用次数: 1
Path Integrals for Nonadiabatic Dynamics: Multistate Ring Polymer Molecular Dynamics. 非绝热动力学的路径积分:多态环状聚合物分子动力学。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2022-01-26 DOI: 10.1146/annurev-physchem-082620-021809
Nandini Ananth

This review focuses on a recent class of path-integral-based methods for the simulation of nonadiabatic dynamics in the condensed phase using only classical molecular dynamics trajectories in an extended phase space. Specifically, a semiclassical mapping protocol is used to derive an exact, continuous, Cartesian variable path-integral representation for the canonical partition function of a system in which multiple electronic states are coupled to nuclear degrees of freedom. Building on this exact statistical foundation, multistate ring polymer molecular dynamics methods are developed for the approximate calculation of real-time thermal correlation functions. The remarkable promise of these multistate ring polymer methods, their successful applications, and their limitations are discussed in detail.

本文综述了最近一类基于路径积分的方法,这些方法仅使用扩展相空间中的经典分子动力学轨迹来模拟凝聚态中的非绝热动力学。具体地说,一个半经典映射协议被用来导出一个精确的,连续的,笛卡尔变量路径积分表示的系统的正则配分函数,其中多个电子状态耦合到核自由度。在此基础上,建立了多态环聚合物分子动力学方法,用于实时热相关函数的近似计算。详细讨论了这些多态环聚合物方法的前景、成功应用以及它们的局限性。
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引用次数: 12
Imaging Dynamic Processes in Multiple Dimensions and Length Scales. 多维和长度尺度的动态过程成像。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2022-02-04 DOI: 10.1146/annurev-physchem-090519-034100
Seth L Filbrun, Fei Zhao, Kuangcai Chen, Teng-Xiang Huang, Meek Yang, Xiaodong Cheng, Bin Dong, Ning Fang

Optical microscopy has become an invaluable tool for investigating complex samples. Over the years, many advances to optical microscopes have been made that have allowed us to uncover new insights into the samples studied. Dynamic changes in biological and chemical systems are of utmost importance to study. To probe these samples, multidimensional approaches have been developed to acquire a fuller understanding of the system of interest. These dimensions include the spatial information, such as the three-dimensional coordinates and orientation of the optical probes, and additional chemical and physical properties through combining microscopy with various spectroscopic techniques. In this review, we survey the field of multidimensional microscopy and provide an outlook on the field and challenges that may arise.

光学显微镜已成为研究复杂样品的宝贵工具。多年来,光学显微镜取得了许多进步,使我们能够发现对所研究样本的新见解。生物和化学系统的动态变化是最重要的研究。为了探测这些样本,已经开发了多维方法来获得对感兴趣的系统的更全面的理解。这些维度包括空间信息,如光学探针的三维坐标和方向,以及通过结合显微镜和各种光谱技术获得的额外的化学和物理性质。本文综述了多维显微技术的研究现状,并对其发展前景和可能面临的挑战进行了展望。
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引用次数: 2
Neural Network Potentials: A Concise Overview of Methods. 神经网络电位:方法的简明概述。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2022-01-04 DOI: 10.1146/annurev-physchem-082720-034254
Emir Kocer, Tsz Wai Ko, Jörg Behler

In the past two decades, machine learning potentials (MLPs) have reached a level of maturity that now enables applications to large-scale atomistic simulations of a wide range of systems in chemistry, physics, and materials science. Different machine learning algorithms have been used with great success in the construction of these MLPs. In this review, we discuss an important group of MLPs relying on artificial neural networks to establish a mapping from the atomic structure to the potential energy. In spite of this common feature, there are important conceptual differences among MLPs, which concern the dimensionality of the systems, the inclusion of long-range electrostatic interactions, global phenomena like nonlocal charge transfer, and the type of descriptor used to represent the atomic structure, which can be either predefined or learnable. A concise overview is given along with a discussion of the open challenges in the field.

在过去的二十年中,机器学习潜力(mlp)已经达到了一个成熟的水平,现在可以应用于化学,物理和材料科学中广泛系统的大规模原子模拟。不同的机器学习算法已经在这些mlp的构建中获得了巨大的成功。在这篇综述中,我们讨论了一组重要的mlp依赖于人工神经网络建立从原子结构到势能的映射。尽管有这些共同的特征,但mlp之间存在重要的概念差异,这些差异涉及系统的维数、远程静电相互作用的包含、非局部电荷转移等全局现象,以及用于表示原子结构的描述符类型,这些描述符可以是预定义的,也可以是可学习的。简要概述并讨论了该领域的开放挑战。
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引用次数: 59
Calculating Multidimensional Optical Spectra from Classical Trajectories. 从经典轨迹计算多维光谱。
IF 14.7 1区 化学 Q1 Chemistry Pub Date : 2022-04-20 Epub Date: 2022-01-21 DOI: 10.1146/annurev-physchem-082620-021302
Roger F Loring

Multidimensional optical spectra are measured from the response of a material system to a sequence of laser pulses and have the capacity to elucidate specific molecular interactions and dynamics whose influences are absent or obscured in a conventional linear absorption spectrum. Interpretation of complex spectra is supported by theoretical modeling of the spectroscopic observable, requiring implementation of quantum dynamics for coupled electrons and nuclei. Performing numerically correct quantum dynamics in this context may pose computational challenges, particularly in the condensed phase. Semiclassical methods based on calculating classical trajectories offer a practical alternative. Here I review the recent application of some semiclassical, trajectory-based methods to nonlinear molecular vibrational and electronic spectra.

多维光谱是从材料系统对一系列激光脉冲的响应中测量的,并且具有阐明特定分子相互作用和动力学的能力,其影响在传统的线性吸收光谱中不存在或模糊。复杂光谱的解释是由光谱观测的理论建模支持的,需要实现耦合电子和原子核的量子动力学。在这种情况下执行数值正确的量子动力学可能会带来计算挑战,特别是在凝聚态。基于计算经典轨迹的半经典方法提供了一种实用的替代方法。本文综述了近年来基于轨迹的半经典方法在非线性分子振动谱和电子谱研究中的应用。
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引用次数: 5
期刊
Annual review of physical chemistry
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