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Measuring Pharmacogene Variant Function at Scale Using Multiplexed Assays. 使用多重测定法大规模测量药物基因变异功能。
IF 12.5 1区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics Pub Date : 2022-01-06 Epub Date: 2021-09-13 DOI: 10.1146/annurev-pharmtox-032221-085807
Renee C Geck, Gabriel Boyle, Clara J Amorosi, Douglas M Fowler, Maitreya J Dunham

As costs of next-generation sequencing decrease, identification of genetic variants has far outpaced our ability to understand their functional consequences. This lack of understanding is a central challenge to a key promise of pharmacogenomics: using genetic information to guide drug selection and dosing. Recently developed multiplexed assays of variant effect enable experimental measurement of the function of thousands of variants simultaneously. Here, we describe multiplexed assays that have been performed on nearly 25,000 variants in eight key pharmacogenes (ADRB2, CYP2C9, CYP2C19, NUDT15, SLCO1B1, TMPT, VKORC1, and the LDLR promoter), discuss advances in experimental design, and explore key challenges that must be overcome to maximize the utility of multiplexed functional data.

随着下一代测序成本的降低,基因变异的鉴定已经远远超过了我们理解其功能后果的能力。这种缺乏理解是对药物基因组学的一个关键承诺的核心挑战:利用遗传信息指导药物选择和剂量。最近开发的多路变异体效应分析方法可以同时对数千个变异体的功能进行实验测量。在这里,我们描述了对8个关键药物基因(ADRB2, CYP2C9, CYP2C19, NUDT15, SLCO1B1, TMPT, VKORC1和LDLR启动子)的近25,000个变体进行的多路分析,讨论了实验设计的进展,并探讨了必须克服的关键挑战,以最大限度地利用多路功能数据。
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引用次数: 6
Emerging Therapeutics, Technologies, and Drug Development Strategies to Address Patient Nonadherence and Improve Tuberculosis Treatment. 新兴疗法、技术和药物开发策略解决患者不依从和改善结核病治疗。
IF 12.5 1区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics Pub Date : 2022-01-06 Epub Date: 2021-09-30 DOI: 10.1146/annurev-pharmtox-041921-074800
Maria Garcia-Cremades, Belen P Solans, Natasha Strydom, Bernard Vrijens, Goonaseelan Colin Pillai, Craig Shaffer, Bruce Thomas, Rada M Savic

Imperfect medication adherence remains the biggest predictor of treatment failure for patients with tuberculosis. Missed doses during treatment lead to relapse, tuberculosis resistance, and further spread of disease. Understanding individual patient phenotypes, population pharmacokinetics, resistance development, drug distribution to tuberculosis lesions, and pharmacodynamics at the site of infection is necessary to fully measure the impact of adherence on patient outcomes. To decrease the impact of expected variabilityin drug intake on tuberculosis outcomes, an improvement in patient adherence and new forgiving regimens that protect against missed doses are needed. In this review, we summarize emerging technologies to improve medication adherence in clinical practice and provide suggestions on how digital adherence technologies can be incorporated in clinical trials and practice and the drug development pipeline that will lead to more forgiving regimens and benefit patients suffering from tuberculosis.

不完美的药物依从性仍然是结核病患者治疗失败的最大预测因素。治疗期间错过的剂量导致复发、结核病耐药性和疾病的进一步传播。了解个体患者表型、群体药代动力学、耐药性发展、结核病病灶的药物分布和感染部位的药效学对于充分衡量依从性对患者预后的影响是必要的。为了减少药物摄入的预期变异性对结核病预后的影响,需要改善患者的依从性和新的宽恕方案,以防止漏给剂量。在这篇综述中,我们总结了在临床实践中提高药物依从性的新兴技术,并就如何将数字依从性技术纳入临床试验和实践以及药物开发管道提供建议,这将导致更宽容的方案并使结核病患者受益。
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引用次数: 8
Chemogenetic Approaches to Probe Redox Pathways: Implications for Cardiovascular Pharmacology and Toxicology. 探讨氧化还原途径的化学遗传学方法:对心血管药理学和毒理学的启示。
IF 12.5 1区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics Pub Date : 2022-01-06 Epub Date: 2021-09-16 DOI: 10.1146/annurev-pharmtox-012221-082339
Benjamin Steinhorn, Emrah Eroglu, Thomas Michel

Chemogenetics refers to experimental systems that dynamically regulate the activity of a recombinant protein by providing or withholding the protein's specific biochemical stimulus. Chemogenetic tools permit precise dynamic control of specific signaling molecules to delineate the roles of those molecules in physiology and disease. Yeast d-amino acid oxidase (DAAO) enables chemogenetic manipulation of intracellular redox balance by generating hydrogen peroxide only in the presence of d-amino acids. Advances in biosensors have allowed the precise quantitation of these signaling molecules. The combination of chemogenetic approaches with biosensor methodologies has opened up new lines of investigation, allowing the analysis of intracellular redox pathways that modulate physiological and pathological cell responses. We anticipate that newly developed transgenic chemogenetic models will permit dynamic modulation of cellularredox balance in diverse cells and tissues and will facilitate the identification and validation of novel therapeutic targets involved in both physiological redox pathways and pathological oxidative stress.

化学遗传学是指通过提供或抑制重组蛋白的特定生化刺激来动态调节重组蛋白活性的实验系统。化学遗传学工具允许对特定信号分子进行精确的动态控制,以描述这些分子在生理学和疾病中的作用。酵母d-氨基酸氧化酶(DAAO)仅在d-氨基酸存在的情况下产生过氧化氢,从而实现细胞内氧化还原平衡的化学遗传学操作。生物传感器的进步使得这些信号分子得以精确定量。化学遗传学方法与生物传感器方法的结合开辟了新的研究领域,允许分析调节生理和病理细胞反应的细胞内氧化还原途径。我们预计,新开发的转基因化学遗传学模型将允许动态调节不同细胞和组织中的细胞多氧平衡,并将有助于识别和验证涉及生理氧化还原途径和病理氧化应激的新治疗靶点。
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引用次数: 5
KCNQ Potassium Channels as Targets of Botanical Folk Medicines. 作为民间植物药靶点的 KCNQ 钾通道
IF 12.5 1区 医学 Q1 PHARMACOLOGY & PHARMACY Pub Date : 2022-01-06 Epub Date: 2021-09-13 DOI: 10.1146/annurev-pharmtox-052120-104249
Kaitlyn E Redford, Geoffrey W Abbott

Since prehistory, human species have depended on plants for both food and medicine. Even in countries with ready access to modern medicines, alternative treatments are still highly regarded and commonly used. Unlike modern pharmaceuticals, many botanical medicines are in widespread use despite a lack of safety and efficacy data derived from controlled clinical trials and often unclear mechanisms of action. Contributing to this are the complex and undefined composition and likely multifactorial mechanisms of action and multiple targets of many botanical medicines. Here, we review the newfound importance of the ubiquitous KCNQ subfamily of voltage-gated potassium channels as targets for botanical medicines, including basil, capers, cilantro, lavender, fennel, chamomile, ginger, and Camellia, Sophora, and Mallotus species. We discuss the implications for the traditional use of these plants for disorders such as seizures, hypertension, and diabetes and the molecular mechanisms of plant secondary metabolite effects on KCNQ channels.

自史前时代起,人类就依赖植物作为食物和药物。即使在现代医学发达的国家,替代疗法仍然备受推崇并被广泛使用。与现代药物不同,许多植物药尽管缺乏临床对照试验得出的安全性和有效性数据,而且通常作用机制不明确,但仍被广泛使用。造成这种情况的原因是许多植物药的成分复杂且未确定,可能具有多因素作用机制和多靶点。在此,我们回顾了新发现的无处不在的电压门控钾通道 KCNQ 亚家族作为植物药靶点的重要性,这些靶点包括罗勒、辣椒、香菜、薰衣草、茴香、甘菊、生姜以及山茶、槐树和野百合等物种。我们讨论了传统上使用这些植物治疗癫痫、高血压和糖尿病等疾病的意义,以及植物次生代谢物对 KCNQ 通道影响的分子机制。
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引用次数: 0
Targeting NRF2 and Its Downstream Processes: Opportunities and Challenges. 靶向NRF2及其下游过程:机遇与挑战。
IF 12.5 1区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics Pub Date : 2022-01-06 Epub Date: 2021-09-09 DOI: 10.1146/annurev-pharmtox-052220-104025
Laura Torrente, Gina M DeNicola

The transcription factor NRF2 coordinates the expression of a vast array of cytoprotective and metabolic genes in response to various stress inputs to restore cellular homeostasis. Transient activation of NRF2 in healthy tissues has been long recognized as a cellular defense mechanism and is critical to prevent cancer initiation by carcinogens. However, cancer cells frequently hijack the protective capability of NRF2 to sustain the redox balance and meet their metabolic requirements for proliferation. Further, aberrant activation of NRF2 in cancer cells confers resistance to commonly used chemotherapeutic agents and radiotherapy. During the last decade, many research groups have attempted to block NRF2 activity in tumors to counteract the survival and proliferative advantage of cancer cells and reverse resistance to treatment. In this review, we highlight the role of NRF2 in cancer progression and discuss the past and current approaches to disable NRF2 signaling in tumors.

转录因子NRF2协调大量细胞保护和代谢基因的表达,以响应各种应激输入,恢复细胞稳态。长期以来,NRF2在健康组织中的瞬时激活一直被认为是一种细胞防御机制,对于防止致癌物引发癌症至关重要。然而,癌细胞经常劫持NRF2的保护能力来维持氧化还原平衡并满足其增殖的代谢需求。此外,癌细胞中NRF2的异常激活使其对常用的化疗药物和放疗产生耐药性。在过去的十年中,许多研究小组试图阻断NRF2在肿瘤中的活性,以抵消癌细胞的生存和增殖优势,并逆转对治疗的耐药性。在这篇综述中,我们强调了NRF2在癌症进展中的作用,并讨论了过去和现在在肿瘤中禁用NRF2信号的方法。
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引用次数: 49
Pharmacology of TRPC Channels and Its Potential in Cardiovascular and Metabolic Medicine. TRPC通道的药理作用及其在心血管和代谢医学中的潜力。
IF 12.5 1区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics Pub Date : 2022-01-06 DOI: 10.1146/annurev-pharmtox-030121-122314
Robin S Bon, David J Wright, David J Beech, Piruthivi Sukumar

Transient receptor potential canonical (TRPC) proteins assemble to form homo- or heterotetrameric, nonselective cation channels permeable to K+, Na+, and Ca2+. TRPC channels are thought to act as complex integrators of physical and chemical environmental stimuli. Although the understanding of essential physiological roles of TRPC channels is incomplete, their implication in various pathological mechanisms and conditions of the nervous system, kidneys, and cardiovascular system in combination with the lack of major adverse effects of TRPC knockout or TRPC channel inhibition is driving the search of TRPC channel modulators as potential therapeutics. Here, we review the most promising small-molecule TRPC channel modulators, the understanding of their mode of action, and their potential in the study and treatment of cardiovascular and metabolic disease.

瞬时受体电位规范(TRPC)蛋白组装形成同源或异四聚体,可渗透到K+, Na+和Ca2+的非选择性阳离子通道。TRPC通道被认为是物理和化学环境刺激的复杂集成商。尽管对TRPC通道的基本生理作用的了解尚不完整,但它们在神经系统、肾脏和心血管系统的各种病理机制和状况中的意义,加上TRPC敲除或TRPC通道抑制缺乏主要不良反应,正在推动TRPC通道调节剂作为潜在治疗药物的研究。在这里,我们回顾了最有前途的小分子TRPC通道调节剂,对它们的作用方式的理解,以及它们在心血管和代谢疾病的研究和治疗中的潜力。
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引用次数: 10
Aryl Hydrocarbon Receptor and Its Diverse Ligands and Functions: An Exposome Receptor. 芳基烃受体及其多种配体和功能:一种暴露体受体。
IF 12.5 1区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics Pub Date : 2022-01-06 Epub Date: 2021-09-09 DOI: 10.1146/annurev-pharmtox-052220-115707
Lucie Larigot, Louise Benoit, Meriem Koual, Céline Tomkiewicz, Robert Barouki, Xavier Coumoul

The aryl hydrocarbon receptor (AhR) is a transcriptional factor that regulates multiple functions following its activation by a variety of ligands, including xenobiotics, natural products, microbiome metabolites, and endogenous molecules. Because of this diversity, the AhR constitutes an exposome receptor. One of its main functions is to regulate several lines of defense against chemical insults and bacterial infections. Indeed, in addition to its well-established detoxication function, it has several functions at physiological barriers, and it plays a critical role in immunomodulation. The AhR is also involved in the development of several organs and their homeostatic maintenance. Its activity depends on the type of ligand and on the time frame of the receptor activation, which can be either sustained or transient, leading in some cases to opposite modes of regulations as illustrated in the regulation of different cancer pathways. The development of selective modulators and their pharmacological characterization are important areas of research.

芳烃受体(AhR)是一种转录因子,在被多种配体激活后调节多种功能,包括外源生物、天然产物、微生物代谢产物和内源性分子。由于这种多样性,AhR构成了一个暴露体受体。它的主要功能之一是调节几种防御化学物质和细菌感染的防线。事实上,它除了具有良好的解毒功能外,还具有多种生理屏障功能,并在免疫调节中起着关键作用。AhR还参与了几个器官的发育及其体内平衡的维持。它的活性取决于配体的类型和受体激活的时间框架,这可以是持续的或短暂的,在某些情况下导致相反的调节模式,如不同癌症途径的调节所示。选择性调节剂的开发及其药理特性是研究的重要领域。
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引用次数: 27
Thirty Years of Neuroscientific Investigation of Placebo and Nocebo: The Interesting, the Good, and the Bad. 安慰剂和反安慰剂的神经科学研究三十年:有趣的、好的和坏的。
IF 12.5 1区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics Pub Date : 2022-01-06 Epub Date: 2021-08-30 DOI: 10.1146/annurev-pharmtox-052120-104536
Fabrizio Benedetti, Elisa Frisaldi, Aziz Shaibani

Over the past 30 years there has been a surge of research on the placebo effect using a neuroscientific approach. The interesting aspects of this effort are related to the identification of several biological mechanisms of both the placebo and nocebo effects, the latter of which is defined as a negative placebo effect. Some important translational implications have emerged both in the setting of clinical trials and in routine medical practice. One of the principal contributions of neuroscience has been to draw the attention of the scientific and medical communities to the important role of psychobiological factors in therapeutic outcomes, be they drug related or not. Indeed, many biological mechanisms triggered by placebos and nocebos resemble those modulated by drugs, suggesting a possible interaction between psychological factors and drug action. Unfortunately, this new knowledge regarding placebos has the potential of being dangerously exploited by pseudoscience.

在过去的30年里,利用神经科学方法对安慰剂效应进行了大量研究。这项研究的有趣之处与确定安慰剂效应和反安慰剂效应的几种生物学机制有关,后者被定义为负安慰剂效应。在临床试验和常规医疗实践中出现了一些重要的转化意义。神经科学的主要贡献之一是引起了科学界和医学界对心理生物学因素在治疗结果中的重要作用的注意,无论这些因素是否与药物有关。事实上,安慰剂和反安慰剂引发的许多生物机制类似于药物调节的机制,这表明心理因素和药物作用之间可能存在相互作用。不幸的是,这些关于安慰剂的新知识有可能被伪科学危险地利用。
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引用次数: 19
The Gut Microbiome, Metformin, and Aging. 肠道微生物群、二甲双胍和衰老。
IF 12.5 1区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics Pub Date : 2022-01-06 Epub Date: 2021-08-24 DOI: 10.1146/annurev-pharmtox-051920-093829
Sri Nitya Reddy Induri, Payalben Kansara, Scott C Thomas, Fangxi Xu, Deepak Saxena, Xin Li

Metformin has been extensively used for the treatment of type 2 diabetes, and it may also promote healthy aging. Despite its widespread use and versatility, metformin's mechanisms of action remain elusive. The gut typically harbors thousands of bacterial species, and as the concentration of metformin is much higher in the gut as compared to plasma, it is plausible that microbiome-drug-host interactions may influence the functions of metformin. Detrimental perturbations in the aging gut microbiome lead to the activation of the innate immune response concomitant with chronic low-grade inflammation. With the effectiveness of metformin in diabetes and antiaging varying among individuals, there is reason to believe that the gut microbiome plays a role in the efficacy of metformin. Metformin has been implicated in the promotion and maintenance of a healthy gut microbiome and reduces many age-related degenerative pathologies. Mechanistic understanding of metformin in the promotion of a healthy gut microbiome and aging will require a systems-level approach.

二甲双胍已被广泛用于治疗2型糖尿病,它也可能促进健康老龄化。尽管二甲双胍的广泛使用和多功能性,其作用机制仍然难以捉摸。肠道通常是数千种细菌的栖息地,由于肠道中二甲双胍的浓度比血浆中要高得多,因此微生物组-药物-宿主相互作用可能会影响二甲双胍的功能。衰老的肠道微生物群中的有害扰动导致先天免疫反应的激活,同时伴有慢性低度炎症。由于二甲双胍治疗糖尿病和抗衰老的效果因人而异,因此有理由相信肠道微生物群在二甲双胍的疗效中发挥了作用。二甲双胍与促进和维持健康的肠道微生物群以及减少许多与年龄相关的退行性病理有关。二甲双胍在促进健康肠道微生物群和衰老中的机制理解将需要一个系统级的方法。
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引用次数: 23
Endocannabinoid-Based Therapies. Endocannabinoid-Based疗法。
IF 12.5 1区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics Pub Date : 2022-01-06 Epub Date: 2021-09-13 DOI: 10.1146/annurev-pharmtox-052220-021800
Daniele Piomelli, Alex Mabou Tagne

The endocannabinoids are lipid-derived messengers that play a diversity of regulatory roles in mammalian physiology. Dysfunctions in their activity have been implicated in various disease conditions, attracting attention to the endocannabinoid system as a possible source of therapeutic drugs. This signaling complex has three components: the endogenous ligands, anandamide and 2-arachidonoyl-sn-glycerol (2-AG); a set of enzymes and transporters that generate, eliminate, or modify such ligands; and selective cell surface receptors that mediate their biological actions. We provide an overview of endocannabinoid formation, deactivation, and biotransformation and outline the properties and therapeutic potential of pharmacological agents that interfere with those processes. We describe small-molecule inhibitors that target endocannabinoid-producing enzymes, carrier proteins that transport the endocannabinoids into cells, and intracellular endocannabinoid-metabolizing enzymes. We briefly discuss selected agents that simultaneous-ly interfere with components of the endocannabinoid system and with other functionally related signaling pathways.

内源性大麻素是脂质衍生的信使,在哺乳动物生理中发挥多种调节作用。其活性的功能障碍与各种疾病有关,引起了人们对内源性大麻素系统作为治疗药物可能来源的关注。该信号复合物有三个组成部分:内源性配体,anandamide和2-花生四烯酰基-sn-甘油(2-AG);一组产生、消除或修饰这种配体的酶和转运体;以及选择性的细胞表面受体介导它们的生物行为。我们概述了内源性大麻素的形成、失活和生物转化,并概述了干扰这些过程的药理学制剂的特性和治疗潜力。我们描述了靶向内源性大麻素产生酶的小分子抑制剂,运输内源性大麻素进入细胞的载体蛋白,以及细胞内内源性大麻素代谢酶。我们简要地讨论了同时干扰内源性大麻素系统成分和其他功能相关信号通路的选定药物。
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引用次数: 22
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Annual review of pharmacology and toxicology
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