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FTIR spectroscopy in biomedical research: how to get the most out of its potential FTIR光谱学在生物医学研究中的应用:如何最大限度地发挥其潜力
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-07-13 DOI: 10.1080/05704928.2021.1946822
S. Magalhães, B. Goodfellow, A. Nunes
Abstract Fourier Transform Infrared (FTIR) Spectroscopy, in particular ATR-FTIR, is a widely used technique that allows, in a very short time, to screen biological samples and to identify its specific spectral signature, being an important tool for clinical diagnosis and biomarker discovery. FTIR spectroscopy is used to screen cells, tissues and biofluids and is already implemented in biomedicine, mainly in pre-clinical setting. Although the experimental procedure is easy to implement, sample preparation, definition of spectra acquisition parameters and spectral analysis are crucial steps to obtain reliable and reproducible results. However, the selection of experimental conditions for spectral analysis can be a difficult task for researchers because the information is dispersed and often the choice is made in an empirical and inaccurate way. This review gathers and summarizes studies using FTIR in pre-clinical and clinical setting and aims to systematize information and propose some guidelines for FTIR spectroscopy studies of biological samples. This will help new users to prepare samples for FTIR analysis and understand the critical steps to correctly perform spectra pretreatment, preprocessing and statistical analysis and to implement appropriate and evidence-based experimental designs.
傅里叶变换红外光谱(FTIR),特别是ATR-FTIR,是一种广泛使用的技术,可以在很短的时间内筛选生物样品并识别其特定的光谱特征,是临床诊断和生物标志物发现的重要工具。FTIR光谱用于筛选细胞、组织和生物液体,并已在生物医学中实施,主要是在临床前环境中。虽然实验过程容易实现,但样品制备、光谱采集参数的定义和光谱分析是获得可靠和可重复性结果的关键步骤。然而,光谱分析实验条件的选择对研究人员来说可能是一项困难的任务,因为信息是分散的,而且往往是以经验和不准确的方式做出选择。本文收集和总结了FTIR在临床前和临床环境中的研究,旨在整理生物样品FTIR光谱研究的信息,并提出一些指导方针。这将有助于新用户准备用于FTIR分析的样品,了解正确执行光谱预处理、预处理和统计分析的关键步骤,并实施适当的、基于证据的实验设计。
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引用次数: 15
Raman spectroscopy in the diagnosis of metabolic syndrome 拉曼光谱在代谢综合征诊断中的应用
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-06-30 DOI: 10.1080/05704928.2021.1944175
Guadalupe Donjuán-Loredo, R. Espinosa‐Tanguma, M. Ramírez-Elías
Abstract Metabolic syndrome (MetS) is defined as a set of metabolic disorders, including central obesity, dyslipidemia, arterial hypertension, and hyperglycemia. The prevalence of MetS is increasing in epidemic proportions in both developed and developing countries. MetS increment has been paralleled by the growing epidemic of type-2 diabetes, hypertension, cardiovascular disease, and obesity. Raman spectroscopy is a noninvasive optical technique that has been used in MetS and associated diseases as an alternative to more invasive routine laboratory studies. Raman Spectroscopy's medical diagnosis application is based on the fact that the molecular composition of healthy tissues or biofluids changes due to disease. Identifying biomarkers with this technique can be used for early diagnosis, monitoring disease evolution, and response to treatment. This article reviews recent applications which demonstrate the potential of Raman spectroscopy in the assessment of MetS diseases.
代谢综合征(MetS)是一组代谢性疾病,包括中枢性肥胖、血脂异常、动脉高血压和高血糖。无论是在发达国家还是在发展中国家,met的流行程度都在上升。代谢当量的增加与2型糖尿病、高血压、心血管疾病和肥胖的日益流行是同步的。拉曼光谱是一种非侵入性光学技术,已用于MetS和相关疾病,作为更具侵入性的常规实验室研究的替代方法。拉曼光谱的医学诊断应用是基于健康组织或生物体液的分子组成因疾病而发生变化这一事实。用这种技术识别生物标志物可用于早期诊断、监测疾病演变和对治疗的反应。本文综述了近年来拉曼光谱在MetS疾病评估中的应用。
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引用次数: 6
Vibrational spectroscopy and its future applications in microbiology 振动光谱学及其在微生物学中的应用前景
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-06-28 DOI: 10.1080/05704928.2021.1942894
M. Jansson, Martin Kögler, S. Hörkkö, T. Ala-Kokko, L. Rieppo
Abstract Vibrational spectroscopic techniques, namely Fourier transform infrared (FTIR) and Raman spectroscopy, are based on the study of molecular vibrations, and they are complementary techniques to each other. This review provides an overview of the vibrational spectroscopic techniques applied in microbiology during the past decade. In addition, future applications of the elaborated spectroscopic techniques will be highlighted. The results of this review show that both FTIR and Raman spectroscopy are promising alternatives to conventional diagnostic approaches because they provide label-free and noninvasive bacterial detection, identification, and antibiotic susceptibility testing in a single step. Cost-effective, accurate, and rapid tests are needed in order to improve diagnostics and patient care, to decrease the use of unnecessary antimicrobial agents, to prevent resistant microbials, and to decrease the overall burden of outbreaks. Prior to that, however, the presented approaches need to be validated in a clinical workflow against the conventional diagnostic approaches.
振动光谱技术,即傅里叶变换红外(FTIR)和拉曼光谱技术,是基于分子振动的研究,它们是相互补充的技术。本文综述了近十年来振动光谱技术在微生物学研究中的应用。此外,还将重点介绍详细的光谱技术的未来应用。这篇综述的结果表明,FTIR和拉曼光谱都是传统诊断方法的有希望的替代方法,因为它们提供了无标签和无创的细菌检测、鉴定和抗生素敏感性测试。为了改进诊断和患者护理,减少不必要的抗微生物药物的使用,预防耐药微生物,并减轻疫情的总体负担,需要具有成本效益、准确和快速的检测。然而,在此之前,所提出的方法需要在临床工作流程中与传统诊断方法进行验证。
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引用次数: 4
Application of multiple spectral systems for the tree disease detection: A review 多光谱系统在树木病害检测中的应用综述
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-06-12 DOI: 10.1080/05704928.2021.1930552
Shiyan Fang, Ruiyan Cui, Yan Wang, Yanru Zhao, Keqiang Yu, Ao Jiang
Abstract Tree diseases endanger forestry and fruit tree plantations seriously worldwide in the past decades, leading to significant economic losses for the agricultural production sector. Rapid and accurate detection of tree diseases is crucial in tree protection. Despite molecular biological detection methods have prominent specificity, they are time-consuming and laborious, and are not suitable for large-scale detection of tree diseases. Spectroscopy with nondestructive, rapid, and high throughput characteristics has been applied to plant disease detection. Spectral detection systems are divided into three categories according to the spectrometer's carrying platform: portable hand-held spectrometer, airborne vehicle-mounted spectrometer, and large laboratory spectrometer. This review summarized three main spectral detection systems and their advantages and disadvantages in detecting various diseases of forestry and fruit trees: including detection of the single disease, multiple stress, and early disease using Visible/near-infrared, Raman, and hyperspectral imaging. Finally, spectroscopy detection technology applications of challenges were summarized, highlighting future trends.
近几十年来,树木病害严重危害着世界范围内的林业和果树种植园,给农业生产部门造成了重大的经济损失。树木病害的快速、准确检测是保护树木的关键。分子生物学检测方法具有突出的特异性,但费时费力,不适合大规模检测树木病害。光谱学具有无损、快速、高通量等特点,已广泛应用于植物病害检测。光谱检测系统根据光谱仪的携带平台分为三类:便携式手持光谱仪、机载车载光谱仪和大型实验室光谱仪。本文综述了三种主要的光谱检测系统及其在林业和果树各种病害检测中的优缺点:包括利用可见光/近红外、拉曼和高光谱成像技术检测单一病害、多重胁迫和病害早期。最后,对光谱检测技术应用面临的挑战进行了总结,突出了未来发展趋势。
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引用次数: 14
Flow field-flow fractionation hyphenated with inductively coupled plasma mass spectrometry: a robust technique for characterization of engineered elemental metal nanoparticles in the environment 流场-流分馏结合电感耦合等离子体质谱法:一种用于环境中工程元素金属纳米颗粒表征的可靠技术
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-06-04 DOI: 10.1080/05704928.2021.1935272
Qingsheng Bai, Yongguang Yin, Yanwanjing Liu, Haowen Jiang, Mengxin Wu, Weidong Wang, Zhiqiang Tan, Jing-fu Liu, M. Moon, B. Xing
Abstract Due to the increased applications of engineered elemental metal nanoparticles (EMNPs) in recent years, increased attention has been devoted to their release into the environment. EMNPs pose potential risks to living organisms, including human beings. Hence, the characterization of EMNPs in the environment has gained significant importance. Among the various techniques reported for the characterization of EMNPs, on-line coupling of flow field-flow fractionation with inductively coupled plasma mass spectrometry (F4-ICPMS) has been well established for the simultaneous separation, identification, and quantification of EMNPs, especially in the complex matrices of environmental samples. Thus, this review focuses on the specific advantages of the F4 method, especially the asymmetrical F4 (AF4) and hollow fiber F4 (HF5) methods, in the separation of EMNPs, the general development of AF4-ICPMS and HF5-ICPMS techniques, and recent advances in the application of these hyphenated techniques in examining the occurrence and transformation of EMNPs in the environment. Finally, several perspectives on these techniques have been put forward.
近年来,由于工程元素金属纳米颗粒(EMNPs)的应用越来越广泛,其释放到环境中的研究受到越来越多的关注。EMNPs对包括人类在内的生物构成潜在风险。因此,环境中EMNPs的表征变得非常重要。在已报道的表征EMNPs的各种技术中,流场-流分馏与电感耦合等离子体质谱(F4-ICPMS)的在线耦合已被很好地建立起来,用于同时分离、鉴定和定量EMNPs,特别是在环境样品的复杂基质中。因此,本文将重点介绍F4方法,特别是不对称F4 (AF4)和中空纤维F4 (HF5)方法在分离EMNPs方面的具体优势,AF4- icpms和HF5- icpms技术的发展概况,以及这些连接技术在检测环境中EMNPs发生和转化方面的最新进展。最后,对这些技术提出了几点展望。
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引用次数: 7
Advanced spectrometric methods for characterizing bio-oils to enable refineries to reduce fuel carbon intensity during co-processing 用于表征生物油的先进光谱方法,使炼油厂能够在协同加工过程中降低燃料碳强度
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-05-17 DOI: 10.1080/05704928.2021.1920030
S. Dell’Orco, S. Rowland, A. Harman-Ware, D. Carpenter, T. Foust, E. Christensen, C. Mukarakate
Abstract A promising approach for supplementing petroleum-derived fuels to support reductions in green-house gas emissions is to convert abundant biomass feedstocks into renewable carbon-rich oils using pyrolysis. However, the resultant bio-oils contain various oxygenated compounds that can impart acidity, chemical and thermal instability, and immiscibility with petroleum derived fuels, necessitating further upgrading to derive fuel blendstocks. Co-processing bio-oils and petroleum-derived liquids in existing refineries is a potentially near-term, cost-effective approach for upgrading bio-oils while reducing refinery carbon intensities. However, one cause for hesitation in co-processing bio-oils is limited comprehensive characterization and speciation of the bio-oil components. Advanced analytical techniques are currently under investigation to enable identification of elusive species in bio-oils, enabling researchers to develop strategies to mitigate catalyst deactivation agents and contaminants. This review provides a brief overview of several analytical methods commonly used to analyze bio-oils and their limitations. In addition, advanced techniques currently under development are discussed to further elucidate bio-oil components that may limit its end use. This will help inform the technical and economic feasibility of co-processing bio-oils with petroleum-derived liquids, therefore, improving the overall downstream processes for biofuels blendstock production.
摘要:通过热解将丰富的生物质原料转化为可再生的富碳油,是一种有希望的补充石油衍生燃料以支持减少温室气体排放的方法。然而,合成的生物油含有各种含氧化合物,这些化合物会产生酸性、化学和热不稳定性,并且与石油衍生燃料不混溶,因此需要进一步升级以获得燃料混合物。在现有炼油厂中共同加工生物油和石油衍生液体是一种潜在的短期、具有成本效益的方法,可以提高生物油的质量,同时降低炼油厂的碳强度。然而,生物油协同加工的一个原因是生物油成分的综合表征和形态有限。目前正在研究先进的分析技术,以识别生物油中难以捉摸的物种,使研究人员能够制定减轻催化剂失活剂和污染物的策略。本文简要介绍了几种常用的生物油分析方法及其局限性。此外,还讨论了目前正在开发的先进技术,以进一步阐明可能限制其最终用途的生物油成分。这将有助于了解生物油与石油衍生液体共同加工的技术和经济可行性,从而改善生物燃料混合原料生产的整体下游工艺。
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引用次数: 2
Recent developments in the application of cloud point extraction as procedure for speciation of trace elements 云点萃取法测定微量元素形态的研究进展
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-05-12 DOI: 10.1080/05704928.2021.1916516
M. Bezerra, Uillian Mozart Ferreira da Mata Cerqueira, S. Ferreira, C. Novaes, F. C. Novais, G. S. Valasques, Bruno Novaes da Silva
Abstract This review addresses the use of cloud point extraction as a separation and pre-concentration method aiming at the speciation of metals and metalloids by spectroanalytical techniques. The principles, advantages and limitations of this technique are presented for a better understanding of its potential. The main strategies for using cloud point extraction in carrying out speciation analysis are discussed. To illustrate its applicability in the development of analytical methodologies aimed at speciation, some works found in the specialized literature are commented, highlighting their contribution to the theme. Finally, future trends for the development in this field (such as speciation of anionic species, cloud point micro extraction, speciation of nanoparticles, among others) is presented and discussed.
摘要:本文综述了利用光谱分析技术对金属和类金属进行分离和预富集的云点提取方法。介绍了该技术的原理、优点和局限性,以便更好地了解其潜力。讨论了利用云点提取进行物种形态分析的主要策略。为了说明其在以物种形成为目标的分析方法发展中的适用性,在专业文献中发现的一些作品被评论,突出他们对主题的贡献。最后,对该领域的未来发展趋势(如阴离子形态、云点微萃取、纳米粒子形态等)进行了展望和讨论。
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引用次数: 7
ICPMS based multiplexed bioassay: Principles, approaches and progresses 基于ICPMS的多重生物测定:原理、方法与进展
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-05-12 DOI: 10.1080/05704928.2021.1918703
Ziyan Li, Rui Liu, Yi Lv
Abstract Recent developments in multiplex bioassay around the theme of precision diagnostics have gained great focus. Inductively coupled plasma mass spectrometry (ICPMS) is emerging as a powerful platform for multiplex bioassay due to its high sensitivity, wide dynamic range, particularly its reliable multiplex sensing ability. This review discusses the progress being made in the multiplex bioassay applicating ICPMS, mainly emphasizes on varieties of biomarkers and methodological innovations. Also, we summarized limitations and proposed prospects to shed new light on the emergence of more powerful and application-oriented analytical methods.
摘要近年来,围绕精确诊断主题的多重生物测定技术的发展受到了广泛关注。电感耦合等离子体质谱(ICPMS)以其高灵敏度、宽动态范围,特别是可靠的多路传感能力,正在成为多路生物测定的有力平台。本文综述了应用ICPMS进行多种生物检测的研究进展,重点介绍了生物标志物的多样性和方法的创新。此外,我们总结了局限性,并提出了展望,为更强大和面向应用的分析方法的出现提供了新的思路。
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引用次数: 6
Innovations and developments in graphite furnace atomic absorption spectrometry (GFAAS) 石墨炉原子吸收光谱法(GFAAS)的创新与发展
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-05-06 DOI: 10.1080/05704928.2021.1919896
D. Butcher
Abstract Graphite furnace atomic absorption spectrometry (GFAAS) is a highly sensitive method for the determination of elements in samples while requiring a low sample volume. The analytes are converted to atoms at high temperatures in an electrothermally heated atomizer. Although line-source GFAAS continues to widely employed, high-resolution continuum source (HR-CS) GFAAS offers more accurate correction for matrix-induced spectral backgrounds. This article reviews recent innovations and developments in GFAAS, including instrumentation; the characterization of fundamental properties; progress in HR-CS GFAAS; sample preparation procedures including vapor generation, solid, and slurry sampling; elemental speciation; preconcentration/separation protocols; and direct analysis. The conclusion summarizes major developments and future directions in GFAAS.
石墨炉原子吸收光谱法(GFAAS)是一种灵敏度高、样品体积小的测定样品中元素的方法。在电热加热的雾化器中,分析物在高温下转化为原子。尽管线源GFAAS仍在广泛应用,但高分辨率连续源(HR-CS) GFAAS对基体诱导的光谱背景提供了更精确的校正。本文回顾了GFAAS的最新创新和发展,包括仪器;基本性质的表征;HR-CS GFAAS研究进展;样品制备程序,包括蒸汽产生,固体和泥浆取样;基本形成;预选/分离协议;直接分析。结论部分总结了GFAAS的主要研究进展和未来发展方向。
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引用次数: 10
Raman spectroscopy and multivariate regression analysis in biomedical research, medical diagnosis, and clinical analysis 拉曼光谱和多元回归分析在生物医学研究、医学诊断和临床分析中的应用
IF 6.1 2区 化学 Q1 INSTRUMENTS & INSTRUMENTATION Pub Date : 2021-05-03 DOI: 10.1080/05704928.2021.1913744
Noureen Siraj, David K. Bwambok, Pamela Brady, Megan E. Taylor, G. Baker, Mujeebat Bashiru, Samantha Macchi, Amanda Jalihal, Iris Denmark, Thuy Le, Brianda Elzey, David Pollard, S. O. Fakayode
Abstract High operational costs of modern medical devices and the required specialized, skilled personnel with certifications to operate most medical instrumentation remains a challenge and an impediment to rapid medical diagnosis and clinical analysis. The simplicity, portability, and ease of operation makes Raman spectrometers appealing for rapid medical diagnosis and clinical analysis at an affordable cost. Besides, the combined use of Raman spectroscopy and multivariate analyses has further facilitated effective pattern recognition providing accurate classification, and/or differentiation of biological and clinical samples. This review article highlights recent advances in Raman spectroscopy in medical diagnosis and clinical analysis between January 2018 and December 2020. Recent innovations in the use of Raman spectroscopy for chemical analysis in human specimens are discussed. Applications of Raman spectroscopy in cancer immunotherapy, cancer imaging, and detecting disease biomarkers in clinical samples are further highlighted. The review article highlights recent innovations in the use of Raman spectroscopy for the detection of various pathogens in human specimens. Moreover, recent innovations of combined uses of Raman spectroscopy and multivariate regression analyses for pattern recognition, and/or classification of clinical samples are discussed. Furthermore, insights into the projection in the use of Raman spectroscopy in medical diagnosis and clinical sample analysis are discussed.
现代医疗设备的高运营成本和需要专业的、熟练的人员通过认证来操作大多数医疗仪器仍然是一个挑战,也是快速医疗诊断和临床分析的障碍。简单,便携性和易于操作使拉曼光谱仪以可承受的成本吸引快速医疗诊断和临床分析。此外,拉曼光谱和多变量分析的结合使用进一步促进了有效的模式识别,提供了准确的分类和/或区分生物和临床样本。本文综述了2018年1月至2020年12月拉曼光谱在医学诊断和临床分析中的最新进展。讨论了拉曼光谱用于人体化学分析的最新创新。进一步强调了拉曼光谱在癌症免疫治疗、癌症成像和临床样品中疾病生物标志物检测方面的应用。这篇综述文章强调了利用拉曼光谱检测人体标本中各种病原体的最新创新。此外,最近的创新结合使用拉曼光谱和多元回归分析模式识别,和/或临床样本的分类进行了讨论。此外,深入了解投影在使用拉曼光谱在医学诊断和临床样品分析进行了讨论。
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引用次数: 7
期刊
Applied Spectroscopy Reviews
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