Biologia futura最新文献

Biodiversity is being lost at an unprecedented rate on Earth. As a first step to more effectively combat this process we need efficient methods to monitor biodiversity changes. Recent technological advance can provide powerful tools (e.g. camera traps, digital acoustic recorders, satellite imagery, social media records) that can speed up the collection of biological data. Nevertheless, the processing steps of the raw data served by these tools are still painstakingly slow. A new computer technology, deep learning based artificial intelligence, might, however, help. In this short and subjective review I oversee recent technological advances used in conservation biology, highlight problems of processing their data, shortly describe deep learning technology and show case studies of its use in conservation biology. Some of the limitations of the technology are also highlighted.

Antiviral peptides (AVPs) open new possibilities as an effective antiviral therapeutic in the current scenario of evolving drug-resistant viruses. Knowledge about the sequence and structure activity relationship in AVPs is still largely unknown. AVPs and antimicrobial peptides (AMPs) share several common features but as they target different life forms (living organisms and viruses), exploring the differential sequence features may facilitate in designing specific AVPs. The current work developed accurate prediction models for discriminating (a) AVPs from AMPs, (b) Coronaviridae AVPs from other virus family specific AVPs and (c) highly active AVPs (HAA) from lowly active AVPs (LAA). Further explainable machine learning methods (using model agnostic global interpretable methods) are utilized for exploring and interpreting the physicochemical spaces of AVPs, Coronaviridae AVPs and highly active AVPs. To further understand the association of physicochemical space distribution with pIC₅₀ values, regression models were developed and analyzed using accumulated local effects and interaction strength analysis. An independent sample t-test is used to filter out the significant compositional differences between the smaller length HAA and longer length HAA groups. AVPs prefer lower charge/length ratio and basic residues in comparison with AMPs. Coronaviridae family-specific AVPs have lower propensities for basic amino acids, charge and preference for aspartic acid. Further there is prevalence for basic residues in lowly active AVPs as compared to highly active AVPs. Sequence order effects captured in terms of average amino acid pair distances proved to be more constructive in deciphering the sequences of AVPs.

The northeastern part of the Carpathian Lowland is one of the most species-rich parts of the region, despite the long-term and sometimes extreme changes in land use. The fragmented remains of formerly contiguous forests maintain a significant part of the wildlife living in different oak, mixed oak, and gallery forest, and even faunas of connected grassland habitats. To reveal how the parallel Carpathian and Pannonian effects form the local insect fauna, the Noctuoidea assemblages of eight forest patches were assessed and compared, based on the distribution data of 479 species. Three types of assemblages were designated, with similar diversity but different compositions. The most unique and valuable ones can be found in the colline area of Transcarpathia, where the high habitat diversity supported by the topography promotes the coexistence of the species of humid forest fauna and many steppic and southern elements. The protection and planned management of these remained forest patches and their network in international cooperation can maintain a significant part of the fauna of the affected regions.

The Natura 2000 network is one of the most important tools for nature conservation in the EU. Therefore, knowledge of the ecology of the species listed on the Habitats Directive annexes is of particular relevance. One of these species is the butterfly Euphydryas aurinia. Much is already known about the ecology of this species at the European level, but information on Romania is scarce. Therefore, in a study area northwest of Cluj, the species was intensively studied in a mark-release-recapture study over its entire flight period. The investigated population harboured many individuals and had a high density. The dispersal behaviour of the individuals was somewhat more pronounced than in Mediterranean and partly also high alpine populations, but roughly comparable to other populations of the nominotypic subspecies. Overall, the ecological differences to Central and Western European populations were not very pronounced, and many of the conservation-relevant statements on this species in Central Europe should also be largely valid in Romania.

As an alternative to harmful chemical fertilizers and toward fulfilling Sustainable Development Goals (SDGs) of the United Nations, growth promoting rhizobacterial bioinoculants, emerged as potential players. These act in multifunctional ways, including seed colonization, seed germination, stress tolerance and many more, leading to proper growth and development of plants. Biopriming seeds with these beneficial multi-trait microbes is an effective way to introduce them in the soil, and this is an example of bottom-up approach of rhizosphere engineering. Using such sustainable approach is promising and, to investigate and analyze, their research trends are of prime importance. Thus, data were retrieved using Lens and Scopus databases and used for patent landscaping and citation network analysis, respectively. For patent landscaping, documents obtained using customized keyword search were broadly from the past 35 years (1987-2022) and yielded 114 patents which were manually curated in title, abstract and claims (TAC). From the year 2000, interest in this area was observed which further gained momentum from the year 2008, and a maximum peak was observed in the year 2021. Patent profile (filed, granted and published) showed an upward trend during this tenure (1987-2022). In this research article, we aim to provide an overview of current research in this field, identify research hotspots, project future development prospects and make recommendations for further research. Patent landscaping and citation network analysis were used to analyze the recent trends in biopriming approaches using microbial bioinoculants for the first time to identify progress and hotspots in the field of seed priming with PGPRs.

The importance of pollination and pollinators is easy to underestimate and impossible to overstate, since its importance goes far beyond the crop production and even the maintenance of plant populations. Most terrestrial ecosystems ultimately depend on the plant-pollinator interactions formed by million years coevolution. This is essential for both the daily functioning of the ecosystems and the long-term development of biodiversity. At the same time, the loss of biodiversity caused by climate change and human activities will soon lead to an ecological crisis, a catastrophe, which could endanger our life: For example, through the decline and loss of various ecosystem services. Such may be the pollination crisis, resulted from a significant loss of pollinating insects' diversity and abundance. The discovery of a pollinator Orthoptera species has encouraged researchers in the densely populated region of Indo-Malaysia to explore the potential role of orthopterans as pollinators. Although the flower visitation of some species has been already known, the role of orthopterans in pollination is scarcely revealed. Here, we collected and reviewed the available data in order to point out some factors of their importance and set priorities that may serve as a basis for further investigations regarding ecological, evolutionary and practical points of view.

The chaperonin TRiC/CCT is cytosolic cylindrical complex of 16 subunits encoded by eight essential genes CCT1-8. It contributes to folding 10% of cellular polypeptides in yeast. The strain carrying substitution point mutation G412E in the equatorial domain of Cct7p resulted in the improper folding of substrates. In this study, the Cct7p mutant exhibited sensitivity to non-optimal growth temperatures and cell wall stressors. Heat shock is known to disrupt cell wall and protein stability in budding yeast. Mitogen-activated protein kinase-mediated cell wall integrity pathway gets activated to compensate the perturbed cell wall. Overexpression of the PKC1 and SLT2 genes of MAPK signaling pathway in mutant rescued the growth and cell division defects. Additionally, the genes of the CWI pathway such as SED1, GFA1, PIR1, and RIM21 are down-regulated. The Cct7p mutant strain (G412E) is unable to withstand the heat stress due to the underlying defects in protein folding and cell wall maintenance. Taken together, our results strongly indicate the interaction between CCT and cell wall integrity pathway.

The supraspecific taxa of the Thalpophila generic complex are revised, a new genus Dandirania gen. n. and two new subgenera, Confectania subgen. n. and Wallaceania subgen n. are described. The genus Chlorothalpa Beck,1996) and its subgenus Subthalpa Beck, 1996 are reinstated from synonymy with Olivenebula Kishida and Yoshimoto, 1977. The western Palaearctic (European) species associated with Olivenebula are transferred to Chlorothalpa (comb. rev.). A new Chlorothalpa (Subthalpa) species, C. vargazoli sp. n.; a new Olivenebula species, O. (O.) stanegomboci sp. n. and a new subspecies O. (O.) oberthueri thomasbaroni ssp. n.; and two species and a new subspecies of Dandirania, D. (W.) sramkogabori sp. n., D. (W.) alfredrussellwallacei sp. n. and D. (D.) opulenta schreieri ssp. n. are described. Chlorothalpa (C.) graslini (Culot, 1913), Dandirania (D.) opulenta (Butler, 1889) and D. (W.) largeteaui (Oberthür, 1881) are upgraded to species level (stat. rev.).

Abundance is a fundamental characteristic of every biological population and is the focus of many research programs in ecology and conservation. In this paper I give an overview of the challenges of estimating abundance. I argue that truly understanding, validating, and refining the field techniques and quantitative methods used to estimate abundance can largely benefit from agent-based simulations. I illustrate this through the example of bird point counts and introduce the software bSims to test statistical and biological assumptions for estimating abundance and to aid survey design.