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Rodent indent not self-evident: a case of mistaken identity of the 'Chicago Rat Hole'. 啮齿动物凹痕不自明:“芝加哥鼠洞”认错的案例。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 Epub Date: 2025-10-15 DOI: 10.1098/rsbl.2025.0343
Michael C Granatosky, Gabby Guilhon, Noah D Chernik, Stratos J Kantonis, Christine J Lee, Edwin Dickinson

The 'Chicago Rat Hole' is a remarkable full body impression ostensibly created by a brown rat (Rattus norvegicus) crossing fresh concrete in Chicago's Roscoe Village that became a viral sensation. While the public attributed the mark to a brown rat, no formal analysis had been conducted to confirm its identity. Using clear anatomical landmarks, we compared measurements from the 'Chicago Rat Hole' to eight sympatric rodent species using univariate and multivariate analyses. Univariate tests showed no significant differences in snout-to-tail length, head width, tail-base width or third digit length between the imprint and members of the genus Sciurus (i.e. tree squirrels). Discriminant function analysis indicated a 98.67% likelihood that the 'Chicago Rat Hole' was a squirrel, with classifications split between the eastern grey squirrel (50.67%) and the fox squirrel (48.00%). Given local population densities, an eastern grey squirrel likely represents the most parsimonious species-level match. This investigation underscores the challenges of attributing a trace to the tracemaker. While we acknowledge the playful spirit of this investigation, our broader aim is to highlight that scientific inquiry begins with curiosity and observation: qualities that are not exclusive to professional scientists, but accessible to anyone with an interest in understanding the natural world.

“芝加哥鼠洞”是一个引人注目的全身印象,表面上是由一只棕色老鼠(褐鼠)穿过芝加哥罗斯科村的新混凝土造成的,这引起了轰动。虽然公众认为这个标记是一只棕色的老鼠,但没有进行正式的分析来确认它的身份。利用清晰的解剖标志,我们使用单变量和多变量分析比较了“芝加哥鼠洞”和八种同域啮齿类动物的测量结果。单变量测试显示,在吻尾长度、头宽、尾基宽度或第三趾长度上,印痕和松鼠属成员(即松鼠)之间没有显著差异。判别函数分析表明,“芝加哥鼠洞”为松鼠的可能性为98.67%,分类在东部灰松鼠(50.67%)和狐松鼠(48.00%)之间。考虑到当地的人口密度,东部灰松鼠可能代表了最节俭的物种水平匹配。这项调查强调了将追踪归因于追踪者的挑战。虽然我们承认这项调查具有好玩的精神,但我们更广泛的目标是强调科学探究始于好奇心和观察:这些品质不是专业科学家所独有的,而是任何对了解自然世界感兴趣的人都可以获得的。
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引用次数: 0
Identification of a sex-determining region potentially involved in resolving genetic conflicts over sex ratio. 性别决定区域的鉴定可能涉及解决性别比例的遗传冲突。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 Epub Date: 2025-10-22 DOI: 10.1098/rsbl.2025.0287
Baptiste Lhéraud, Yann Dussert, Mohamed Amine Chebbi, Isabelle Giraud, Richard Cordaux, Jean Peccoud

Sex-determining genes remain largely uncharacterized outside classical models in vertebrates and insects, leaving a gap in our understanding of their evolutionary emergence. The terrestrial isopod Armadillidium vulgare provides an excellent model for investigating this question, as it presents multiple genetic sex determinants. Some lineages possess a masculinizing dominant allele at a locus called the 'M gene', which is analogous to an XY system. This allele is hypothesized to have been selected due to the deficit of males caused by a non-Mendelian feminizing factor previously described. The existence of the M gene was inferred from crosses carried out in the 1990s, but its molecular nature remains unresolved. Here, we conducted a genome-wide single-nucleotide polymorphisms analysis combining pooled sequencing of male and female progenies with sequencing of individual parents across two families. Bayesian estimation of haplotype frequencies in progenies pinpointed a candidate genomic region of approximately two megabases. Notably, this region contains the gene encoding the androgenic gland hormone, a protein involved in male sexual differentiation. Our findings lay the groundwork for functional investigations of the M gene, offering novel insights into the dynamics of sex determination in terrestrial isopods and into the turnover of sex chromosomes in response to sex-ratio distortion.

在脊椎动物和昆虫的经典模型之外,性别决定基因在很大程度上仍未被表征,这给我们对它们的进化出现的理解留下了空白。陆生等足类犰狳(Armadillidium vulgare)为研究这个问题提供了一个极好的模型,因为它呈现出多种遗传性别决定因素。一些谱系在一个被称为“M基因”的位点上拥有一个男性化的显性等位基因,这类似于XY系统。这个等位基因被假设是由于先前描述的非孟德尔女性化因素导致的雄性缺陷而被选择的。从20世纪90年代进行的杂交中推断出M基因的存在,但其分子性质仍未得到解决。在这里,我们进行了一项全基因组单核苷酸多态性分析,结合了两个家庭中男性和女性后代的汇总测序以及个体父母的测序。对后代单倍型频率的贝叶斯估计确定了一个大约2兆碱基的候选基因组区域。值得注意的是,这个区域包含编码雄性激素的基因,这是一种与男性性别分化有关的蛋白质。我们的发现为M基因的功能研究奠定了基础,为陆地等足类动物的性别决定动力学和性染色体的转换响应性别比例扭曲提供了新的见解。
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引用次数: 0
Physiological synchrony among human fishers during collective hunting with wild dolphins. 人类渔民与野生海豚集体狩猎时的生理同步性。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 Epub Date: 2025-10-29 DOI: 10.1098/rsbl.2025.0421
Hanja B Brandl, João V S Valle-Pereira, Jens C Pruessner, Alexandre M S Machado, Fábio G Daura-Jorge, Mauricio Cantor, Damien R Farine

Predator physiology is often overlooked in predator-prey interactions, despite its potential to significantly influence hunting dynamics and social cooperation among predators. We address this gap by investigating how physiological alignment relates to group dynamics and hunting performance in a unique interspecies mutualism: artisanal net-casting fishers who target fish with assistance from wild dolphins. We monitored 24 fishers using high-resolution chest-belt sensors, recording continuous electrocardiograms (ECG) and GPS positions. We then calculated interpersonal heart rate variability (HRV) synchrony in low (LF) and high frequency (HF) bands while tracking changes in foraging and social contexts. In both LF and HF HRV domains, positive social factors increased HRV synchrony among fishers, especially those with established cooperative bonds, whereas distance between fishers decreased HRV synchrony. External factors-the presence and activity of dolphins-had no measurable impact on HRV synchrony. We also found a negative association between group-level hunting success and HRV synchrony in the LF domain, which is influenced by both sympathetic and parasympathetic activity. By demonstrating the role of physiological synchrony during collective hunting in humans-driven by social factors and with direct implications for hunting outcomes-our study advances the current understanding of the eco-physiological dynamics of social predators in predator-prey systems.

在捕食者-猎物的相互作用中,捕食者生理学经常被忽视,尽管它有可能显著影响捕食者之间的狩猎动态和社会合作。我们通过研究生理定位如何与群体动力学和独特的物种间互惠关系中的狩猎表现相关来解决这一差距:在野生海豚的帮助下,手工撒网渔民以鱼为目标。我们使用高分辨率胸带传感器监测了24名渔民,记录了连续心电图(ECG)和GPS位置。然后,我们计算了低(LF)和高频(HF)波段的人际心率变异性(HRV)同步性,同时跟踪了觅食和社会环境的变化。在低频和高频HRV域中,积极的社会因素增加了渔民之间的HRV同步性,特别是那些建立了合作关系的渔民,而渔民之间的距离降低了HRV同步性。外部因素——海豚的存在和活动——对HRV同步没有可测量的影响。我们还发现群体水平狩猎成功与左脑区域HRV同步之间存在负相关,这受到交感神经和副交感神经活动的影响。通过证明人类在集体狩猎过程中生理同步性的作用——由社会因素驱动,并直接影响狩猎结果——我们的研究推进了目前对捕食者-猎物系统中社会捕食者生态生理动力学的理解。
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引用次数: 0
Why did Bob stop losing weight? We need to talk about energy expenditure compensation. 鲍勃为什么不减肥了?我们需要谈谈能量消耗补偿。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 Epub Date: 2025-10-08 DOI: 10.1098/rsbl.2025.0275
Lewis G Halsey

Repeatedly, intervention studies report that participants undertaking a new exercise regimen lose weight initially, but then their weight loss quickly plateaus. A careful look at the literature shows that plateauing happens even when participants' food intake does not increase and their exercise intensity is maintained. So how can we explain this, given that if the body is consistently in energy debt, surely weight loss must result. I argue that energy expenditure compensation-reductions in energy expended on some biological processes to counteract increases in energy expended on activity levels-is an under-recognized compensatory response to heightened exercise. We observe energy expenditure compensation 'in the field', for example, people in pre-industrialized nations expend a lot of energy each day on physical activity but nonetheless have a daily energy expenditure commensurate with that of relatively sedentary Westerners. But most researchers and practitioners have not connected the aforementioned laboratory and field observations-that is, if our activity levels are consistently heightened for long enough, our bodies adaptively compensate in terms of overall energy expenditure, such that if we undertake an exercise regimen, in the long run we only lose a fraction of the weight we aspire to. We need to raise awareness about energy expenditure compensation, how it can limit weight loss and how in light of this knowledge we might better prescribe 'weight loss regimens' to encourage additional weight reduction in those who aspire to it.

多次的干预研究报告说,参加一项新的运动方案的参与者最初体重减轻,但随后他们的体重下降很快就停滞不前了。仔细研究文献就会发现,即使参与者的食物摄入量没有增加,运动强度保持不变,也会出现停滞。那么我们该如何解释这一点呢?如果身体一直处于能量债务状态,体重肯定会下降。我认为,能量消耗补偿——在某些生物过程中消耗的能量减少,以抵消在活动水平上消耗的能量增加——是对加强锻炼的一种未得到充分认识的补偿反应。我们观察到“在野外”的能量消耗补偿,例如,前工业化国家的人们每天在体育活动上消耗大量能量,但他们的每日能量消耗与相对久坐的西方人相当。但大多数研究人员和实践者并没有把前面提到的实验室和实地观察联系起来——也就是说,如果我们的活动水平持续提高足够长的时间,我们的身体就会根据整体能量消耗进行适应性补偿,因此,如果我们进行锻炼,从长远来看,我们只减掉了我们所期望的一小部分体重。我们需要提高对能量消耗补偿的认识,它如何限制减肥,以及根据这些知识,我们如何更好地规定“减肥方案”,以鼓励那些渴望减肥的人进一步减肥。
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引用次数: 0
Optic tectum size correlates positively with eye size across, but not within, populations of Asiatic toads along altitudinal gradients. 沿海拔梯度,亚洲蟾蜍种群间视顶盖大小与眼睛大小呈正相关,但在种群内不呈正相关。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 Epub Date: 2025-10-29 DOI: 10.1098/rsbl.2025.0487
Zhongyi Yao, Jinzhong Fu

Co-variation with functionally integrated sensory structures contributes to the size evolution of brain regions. In this study, we investigated co-variation between sizes of the optic tectum and eye of Asiatic toads (Bufo gargarizans) along altitudinal gradients. The relative sizes of both the optic tectum and eye decrease significantly along with increases in altitude. Furthermore, optic tectum size is positively correlated with eye size among populations (p < 0.05, R2 = 0.290), but not among individuals within each population, where natural selection occurs. The eye and optic tectum are likely subjected to parallel and independent local adaptation along altitudinal gradients that produce the correlative pattern; however, the pattern does not support functional integration and selection on their correlation. Eye size change may not have a significant impact on optic tectum evolution. Our study highlights the importance of cross-scale comparative analysis for inferring evolutionary processes.

与功能整合的感觉结构的共变有助于脑区域的大小进化。本研究研究了亚洲蟾蜍(Bufo gargarizans)视顶盖和眼睛大小沿海拔梯度的共变异。视顶盖和眼睛的相对大小都随着海拔的升高而明显减小。此外,视顶盖大小在种群间与眼睛大小呈正相关(p < 0.05, R2 = 0.290),但在种群内个体间不呈正相关,这是自然选择的结果。眼睛和视神经顶盖可能会沿着海拔梯度平行而独立地进行局部适应,从而产生相关的模式;然而,该模式不支持功能集成和对其相关性的选择。眼睛大小的变化可能对视神经顶盖的进化没有显著的影响。我们的研究强调了跨尺度比较分析对推断进化过程的重要性。
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引用次数: 0
Visual lateralization as an indicator of animal welfare. 作为动物福利指标的视觉侧化。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 Epub Date: 2025-10-29 DOI: 10.1098/rsbl.2025.0445
Agnese Crisante, Oliver H P Burman, Thomas W Pike, Anna Wilkinson

Functional specialization of the brain hemispheres has been observed across the animal kingdom, with the left hemisphere being associated with positive emotions while the right hemisphere is associated with negative emotions. In vertebrates, contralateral eye use is indicative of which brain hemisphere is being used for processing and so may therefore reveal affective state. Using a within-subjects design, we investigated whether lateralized eye use could be used as a non-invasive welfare indicator in captive-bred lizards (Pogona vitticeps) housed in standard or enriched enclosures for four weeks. Eye use was recorded during basking, a key maintenance behaviour. We found that when lizards were housed in standard enclosures (an environment associated with reduced welfare) they exhibited significantly greater use of their left eye (right brain hemisphere) compared to when they were housed in enriched enclosures (an environment associated with improved welfare). These findings suggest that the negative affective state induced by housing conditions is reflected in lateralized eye use, making this a promising, non-invasive tool for assessing animal welfare that is likely to be of value across vertebrate species.

在整个动物王国中都观察到大脑半球的功能专门化,左半球与积极情绪有关,而右半球与消极情绪有关。在脊椎动物中,对侧眼睛的使用表明哪一个大脑半球正在进行处理,因此可能揭示情感状态。采用受试者内部设计,我们调查了在标准或强化围栏中饲养四周的圈养繁殖蜥蜴(Pogona vitticeps)的侧眼使用是否可以作为非侵入性福利指标。在晒日光浴时,眼睛的使用情况被记录下来,这是一种关键的保养行为。我们发现,当蜥蜴被安置在标准的围栏中(与福利减少有关的环境)时,与被安置在丰富的围栏中(与福利改善有关的环境)相比,它们表现出明显更多地使用左眼(右脑半球)。这些发现表明,由住房条件引起的消极情感状态反映在侧眼使用中,使其成为一种有前途的、非侵入性的评估动物福利的工具,可能在脊椎动物物种中具有价值。
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引用次数: 0
Giant icons and lesser kin: Chinese public perception of panda welfare at Chengdu Research Base of Giant Panda Breeding. 巨象与小亲缘:中国公众对成都大熊猫繁育研究基地大熊猫福利的看法。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 Epub Date: 2025-10-29 DOI: 10.1098/rsbl.2025.0216
Yulei Guo, David A Fennell

In this article, we consider the extent to which wildlife tourism in China has become a nodal point where human-animal interactions have been consistently shaped and reshaped by the multiple layers of naturecultural complexity. We do this by investigating Chinese visitors' evaluation of animal welfare as they apply to red and giant pandas at the Chengdu Research Base of Giant Panda Breeding (Panda Base). A survey of Chinese visitors indicated generally positive perceptions of the welfare conditions of pandas at Panda Base. Visitors largely viewed the institution as providing excellent care to pandas, reflecting a high degree of public trust in the organization. While red pandas were perceived to experience slightly better welfare conditions, visitor concern and attention focussed more heavily on giant pandas-possibly due to their iconic status. This study investigates how species status and environmental visibility influence Chinese visitors' perceptions of animal welfare at a major wildlife tourism site. It highlights how iconic animals such as the giant panda are often assumed to receive excellent care, while lesser-known species like the red panda invite more diverse interpretations-thus revealing a potential symbolic bias in public welfare judgements. These findings suggest a symbolic bias in welfare judgements, shaped not only by observable enclosure features but also by the animals' cultural significance in the native culture.

在这篇文章中,我们考虑了中国野生动物旅游在多大程度上已经成为一个节点,在这个节点上,人与动物的互动一直被多层次的自然文化复杂性所塑造和重塑。我们通过调查中国游客对成都大熊猫繁育研究基地(熊猫基地)的大熊猫和小熊猫的动物福利评价来做到这一点。一项针对中国游客的调查显示,人们对熊猫基地大熊猫的福利状况普遍持积极态度。游客大多认为该机构为熊猫提供了极好的照顾,这反映了公众对该组织的高度信任。虽然人们认为小熊猫的福利条件略好一些,但游客的关注和注意力更多地集中在大熊猫身上——可能是由于它们的标志性地位。本研究调查了在一个大型野生动物旅游点,物种状况和环境能见度如何影响中国游客对动物福利的看法。它强调了像大熊猫这样的标志性动物通常被认为得到了非常好的照顾,而像小熊猫这样不太为人所知的物种却有更多不同的解释——从而揭示了在公益判断中潜在的象征性偏见。这些发现表明,在福利判断中存在一种象征性的偏见,这种偏见不仅受到可观察到的圈地特征的影响,还受到动物在本土文化中的文化意义的影响。
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引用次数: 0
Evidence of cellular adaptations in a fungal cultivar promoting resource exchange with leafcutter ant farmers. 真菌品种的细胞适应性促进与切叶蚁农民资源交换的证据。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 DOI: 10.1098/rsbl.2025.0259
Ayoub Stelate, Jonathan Zvi Shik

Leafcutter farming systems are ant-fungus mutualisms whose ecological success hinges on differentiation of fungal hyphae into swollen cells called gongylidia that ants consume. While gongylidium cells are unique signatures of coevolved crop domestication, their cell biology is poorly understood. Each gongylidium cell contains a large vacuole that is thought to protectively store plant degradation enzymes that ants ingest and vector unharmed in faecal droplets back to the fungus. We hypothesized that enzyme storage requires gongylidium vacuoles to have distinct levels of pH and reactive oxygen species (ROS) compared to the vacuoles of undifferentiated hyphae that likely degrade cellular waste. We used live-cell fluorescence microscopy of fungal isolates with targeted probes to first show that both cell types had vacuoles with lower pH than the surrounding cytosol. In contrast, while hyphal vacuoles stored ROS, gongylidium vacuoles excluded these potentially harmful molecules. These findings suggest derived cellular adaptations in a mutualistic fungus where gongylidia protect ant-vectored enzymes through specialized subcellular ROS compartmentalization.

切叶农业系统是一种抗真菌的共生系统,其生态上的成功取决于真菌菌丝分化成蚂蚁消耗的被称为巩膜的肿胀细胞。虽然柱体细胞是共同进化作物驯化的独特特征,但对其细胞生物学的了解甚少。每个柱体细胞都含有一个大液泡,被认为可以保护储存蚂蚁摄入的植物降解酶,并以粪便液滴的形式毫发无损地传播回真菌。我们假设,与可能降解细胞废物的未分化菌丝液泡相比,酶储存需要卵泡液泡具有不同水平的pH和活性氧(ROS)。我们用靶向探针对真菌分离物进行活细胞荧光显微镜观察,首先发现两种细胞类型的液泡pH值都低于周围的细胞质。相反,当菌丝液泡储存活性氧时,巩膜液泡排除了这些潜在的有害分子。这些发现表明,在互惠真菌中,柱体通过专门的亚细胞ROS区隔来保护抗载体酶的衍生细胞适应性。
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引用次数: 0
A long-term perspective to the effects of the 2023 marine heat wave on stony corals in the Caribbean. 2023年海洋热浪对加勒比海石珊瑚影响的长期展望。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 Epub Date: 2025-10-15 DOI: 10.1098/rsbl.2025.0388
Peter J Edmunds, Howard R Lasker

Marine heat waves (MHW) are a leading cause of death for stony corals, and it is reasonable to expect that a record-breaking MHW would negatively impact coral communities; 2023-2024 provided a test of this assertion in St John, US Virgin Islands, where an intense MHW brought temperatures of 30.6°C and degree-heating weeks of 23.23°C-weeks. On reefs where coral cover has been low for decades, the 2023/2024 MHW did not have discernable effects on coral cover. Nonetheless, there was a trend between 2023 and 2024 for mean coral cover to decline by small absolute (≤ 3%), but large relative (13-27%) amounts, with these changes affecting multiple genera and perturbing coral assemblages. These trends are eclipsed by the massive changes that have affected these coral communities since 1987; the 2023/2024 MHW was the latest in a series of disturbances transitioning these reefs to low coral cover. This MHW did not statistically depress coral cover, but it changed coral assemblages, intensifying the ecological perils of rarity, extirpation and perhaps local extinction.

海洋热浪(MHW)是石珊瑚死亡的主要原因,我们有理由预计,创纪录的海洋热浪将对珊瑚群落产生负面影响;2023年至2024年,美属维尔京群岛圣约翰对这一说法进行了测试,在那里,强烈的MHW带来了30.6°C的温度,周加热度为23.23°C。在珊瑚覆盖率几十年来一直很低的珊瑚礁上,2023/2024年的MHW对珊瑚覆盖率没有明显的影响。尽管如此,在2023年至2024年期间,平均珊瑚覆盖的绝对下降幅度较小(≤3%),但相对下降幅度较大(13-27%),这些变化影响了多个属,并扰乱了珊瑚组合。自1987年以来影响这些珊瑚群落的巨大变化使这些趋势黯然失色;2023/2024年的MHW是一系列干扰中最新的一次,这些干扰将这些珊瑚礁转变为低珊瑚覆盖率。从统计数据来看,MHW并没有减少珊瑚的覆盖面积,但它改变了珊瑚的组合,加剧了珊瑚稀少、灭绝甚至局部灭绝的生态危险。
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引用次数: 0
Resource limitation during larval growth leads to higher flight propensity in adult beetles. 幼虫生长过程中的资源限制导致成虫有较高的飞行倾向。
IF 3 2区 生物学 Q2 BIOLOGY Pub Date : 2025-10-01 Epub Date: 2025-10-29 DOI: 10.1098/rsbl.2025.0510
Ori Stearns, Tomer Urca, Eran Gefen, Roi Gurka, Gal Ribak

The mango stem borer Batocera rufomaculata is a large beetle (Cerambycidae) exhibiting a high intra-specific variation in adult body size because of differing environmental conditions during larval growth. Previous studies revealed that smaller individuals can fly longer distances than larger ones before reaching exhaustion, a surprising fact considering that the cost of transport is expected to increase with decreased body size. We tested the flight propensity and metabolic rhythms of these beetles as a function of sex and body size. The intrinsic flight-initiating behaviour and the daily fluctuations in metabolic rate (MR) were measured over 48 h in closed arenas and in metabolic chambers, respectively. Beetles displayed a strong circadian pattern of nocturnal activity in both locomotion and MR. Smaller conspecifics were significantly more active both metabolically and behaviourally than larger ones with sex having no effect on the size-related difference. The results suggest a stronger innate drive to disperse by flight in smaller conspecifics, providing a behavioural-physiological link between environmental conditions during the larval growth period and the dispersal potential of the adults.

芒果茎螟虫是一种大型甲虫(天牛科),由于幼虫生长过程中不同的环境条件,其成虫体型在种内变化很大。先前的研究表明,体型较小的个体在精疲力竭之前可以比体型较大的个体飞得更远,考虑到运输成本预计会随着体型的减小而增加,这是一个令人惊讶的事实。我们测试了这些甲虫的飞行倾向和代谢节律,作为性别和体型的函数。在封闭场地和代谢室中分别测量了48小时内的内在飞行启动行为和代谢率(MR)的每日波动。甲虫在运动和运动中都表现出强烈的夜间活动的昼夜节律模式,体型较小的同种甲虫在代谢和行为上都明显比体型较大的同种甲虫活跃,而性别对体型相关的差异没有影响。研究结果表明,在较小的同种幼虫中,通过飞行分散的先天驱动更强,这为幼虫生长期间的环境条件和成虫的分散潜力之间提供了行为-生理联系。
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引用次数: 0
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