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Fiat Surfaces in the Basic Formal Ontology.
Michael Rabenberg, Werner Ceusters

The Basic Formal Ontology (BFO) class continuant fiat boundary and its subclasses, including fiat surface, are not heavily axiomatized; they have elucidations, not definitions; and the meanings of these elucidations are poorly captured by the relevant BFO axioms. This paper is an effort to make progress in these respects for fiat surface. We identify a range of desiderata for a BFO-conformant view of fiat surface, argue that the GitHub does not satisfy them, argue that the view of fiat surfaces in Arp et al. (2015) does a better job, and supplement that view in ways that do a still better job. Our discussion allows us to, inter alia, present a number of axioms relevant to our topic worthy of consideration for inclusion in BFO or dependent ontologies in specific domains and for specific purposes.

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引用次数: 0
Axiomatizing SNOMED CT Disorders: Should There Be Room for Interpretation? SNOMED CT 疾病的公理化:是否应留有余地?
Werner Ceusters, Anuwat Pengput

SNOMED CT is a large concept-based terminology designed according to epistemic, semantic and pragmatic principles relevant to clinicians. Its goal is structured clinical reporting in electronic healthcare records (EHRs). The Basic Formal Ontology (BFO) is an ontology designed on the basis of types claimed to exist in reality based on a domain-independent ontological theory. Its goal is faithful representation of reality within that theory. The Ontology for General Medical Science (OGMS) extends the BFO by providing definitions for types relevant within the clinical domain. Combining SNOMED CT with the ontological rigor of BFO and OGMS might improve clinical reporting by, f.i., preventing data entry mistakes and inconsistencies, and make EHRs more comparable. To that end, we are developing a logical framework capable of exploiting what SNOMED CT offers terminologically and realism-based ontologies such as the BFO and the OGMS ontologically by means of bridging axioms compatible with the BFO, and expressed in the same CLIF-dialect as used in its axiomatization in first order logic. In this paper, we report on our attempts to detect in the combinations of binary relations that are used in the definition of SNOMED CT's definitions of disorder concepts patterns which might at least partially automate the construction of such axioms. Our findings suggest that this partial automation is indeed possible, but to a smaller extent than we had hoped for. We compare our approach with a recent proposal that seeks to bring SNOMED CT and BFO closer together by reinterpreting SNOMED CT disorders as clinical occurrents. The proposal has its merit in providing a realist underpinning for that part of SNOMED CT's concept model in terms of the BFO, but is not discriminatory enough for an automatic translation into OGMS. Key problem is the lack of face validity of SNOMED CT disorder terms as compared to the formal definitions they are given and this in absence of textual definitions.

SNOMED CT 是根据与临床医生相关的认识论、语义学和实用性原则设计的基于概念的大型术语。其目标是在电子医疗记录(EHR)中进行结构化临床报告。基本形式本体论(BFO)是一种本体论,其设计基础是基于独立于领域的本体论理论而声称在现实中存在的类型。其目标是在该理论范围内忠实地再现现实。通用医学本体论(OGMS)扩展了 BFO,为临床领域的相关类型提供了定义。将 SNOMED CT 与 BFO 和 OGMS 的本体论严谨性结合起来,可以通过防止数据录入错误和不一致等方式改进临床报告,并使电子病历更具可比性。为此,我们正在开发一个逻辑框架,通过与 BFO 兼容的桥接公理,利用 SNOMED CT 在术语上提供的功能,以及 BFO 和 OGMS 在本体论上基于现实主义的本体,并以其在一阶逻辑公理化中使用的相同 CLIF 方言来表达。在本文中,我们报告了我们试图从 SNOMED CT 的失调概念定义中使用的二元关系组合中发现至少可以部分自动构建此类公理的模式。我们的研究结果表明,这种部分自动化确实是可能的,但程度比我们期望的要小。我们将我们的方法与最近提出的一项建议进行了比较,该建议试图通过将SNOMED CT疾病重新解释为临床发生物来拉近SNOMED CT与BFO之间的距离。该建议的优点是为 SNOMED CT 概念模型中有关 BFO 的部分提供了现实主义的基础,但在自动翻译成 OGMS 方面却缺乏足够的辨别力。问题的关键在于,SNOMED CT 紊乱术语与它们的正式定义相比,缺乏表面有效性,而且这还是在没有文本定义的情况下。
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引用次数: 0
An Infrastructure for Collaborative Ontology Development 协同本体开发的基础结构
D. Allemang, P. Garbacz, Przemysław Grądzki, E. Kendall, R. Trypuz
Collaborative development of a shared or standardized ontology presents unique issues in workflow, version control, testing, and quality control. These challenges are similar to challenges faced in large-scale collaborative software development. We have taken this idea as the basis of a collaborative ontology development platform based on familiar software tools, including Continuous Integration platforms, version control systems, testing platforms, and review workflows. We have implemented these using open-source versions of each of these tools, and packaged them into a full-service collaborative platform for collaborative ontology development. This platform has been used in the development of FIBO, the Financial Industry Business Ontology, an ongoing collaborative effort that has been developing and maintaining a set of ontologies for over a decade. The platform is open-source and is being used in other projects beyond FIBO. We hope to continue this trend and improve the state of practice of collaborative ontology design in many more industries.
共享或标准化本体的协作开发在工作流、版本控制、测试和质量控制方面提出了独特的问题。这些挑战类似于在大规模协作软件开发中所面临的挑战。我们将这个想法作为基于我们熟悉的软件工具(包括持续集成平台、版本控制系统、测试平台和评审工作流)的协作本体开发平台的基础。我们已经使用这些工具的开源版本实现了这些功能,并将它们打包成一个用于协作本体开发的全方位服务协作平台。该平台已用于FIBO(金融行业业务本体)的开发,这是一项正在进行的协作工作,十多年来一直在开发和维护一组本体。该平台是开源的,正在FIBO以外的其他项目中使用。我们希望延续这一趋势,并在更多的行业中改进协作本体设计的实践状态。
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引用次数: 5
Standpoint Logic: Multi-Perspective Knowledge Representation 立场逻辑:多视角知识表示
Lucía Gómez Álvarez, S. Rudolph
Ontologies and knowledge bases encode, to a certain extent, the standpoints or perspectives of their creators. As differences and conflicts between standpoints should be expected in multi-agent scenarios, this will pose challenges for shared creation and usage of knowledge sources. Our work pursues the idea that, in some cases, a framework that can handle diverse and possibly conflicting standpoints is more useful and versatile than forcing their unification, and avoids common compromises required for their merge. Moreover, in analogy to the notion of family resemblance concepts, we propose that a collection of standpoints can provide a simpler yet more faithful and nuanced representation of some domains. To this end, we present standpoint logic, a multi-modal framework that is suitable for expressing information with semantically heterogeneous vocabularies, where a standpoint is a partial and acceptable interpretation of the domain. Standpoints can be organised hierarchically and combined, and complex correspondences can be established between them. We provide a formal syntax and semantics, outline the complexity for the propositional case, and explore the representational capacities of the framework in relation to standard techniques in ontology integration, with some examples in the Bio-Ontology domain.
本体和知识库在一定程度上编码了其创造者的立场或观点。由于在多智能体场景中,不同观点之间的差异和冲突在所难免,这将对共享创建和使用知识资源提出挑战。我们的工作遵循这样一种理念,即在某些情况下,一个能够处理不同且可能相互冲突的立场的框架比强迫它们统一更有用,更通用,并避免了它们合并所需的共同妥协。此外,与家族相似性概念的概念类似,我们提出一个观点的集合可以为某些领域提供更简单但更忠实和细致入微的表示。为此,我们提出了立场逻辑,这是一种多模态框架,适用于用语义异构词汇表表达信息,其中立场是对领域的部分和可接受的解释。立场可以分层组织和组合,并且可以在它们之间建立复杂的对应关系。我们提供了形式化的语法和语义,概述了命题案例的复杂性,并通过生物本体领域的一些示例,探索了与本体集成中的标准技术相关的框架的表示能力。
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引用次数: 10
Towards Formalisation of Concept Descriptions and Constraints 迈向概念描述和约束的形式化
Matt Selway, M. Stumptner, W. Mayer
The integrated management of industrial systems in future environments like Industry 4.0 requires the effective management of information throughout the engineering life cycle. As systems pass through phases of design, construction, operation, maintenance, renewal or replacement, they will be administered via different information ecosystems, requiring changing perspectives on their descriptive information. A central role in the interplay of software and hardware artefacts, functions, documentation and managing software is played by the descriptions of concepts (i.e. formalised definitions of concepts within the domain of quantification). In this paper we propose a unified formalisation of descriptions that permits consistent analysis of the relationships between the designs, types, products, and concrete artefacts that can be found in the industrial engineering life-cycle. The approach is consistent with our earlier framework that describes artefacts, requirements and functional roles in the context of the DOLCE foundational ontology.
在工业4.0等未来环境中,工业系统的集成管理需要在整个工程生命周期中有效地管理信息。当系统经过设计、建造、操作、维护、更新或更换阶段时,它们将通过不同的信息生态系统进行管理,这就需要改变对其描述性信息的看法。在软件和硬件工件、功能、文档和管理软件的相互作用中,一个核心角色是概念的描述(即量化领域内概念的形式化定义)。在本文中,我们提出了一种统一的形式化描述,允许对工业工程生命周期中可以找到的设计、类型、产品和具体工件之间的关系进行一致的分析。该方法与我们之前在DOLCE基础本体上下文中描述工件、需求和功能角色的框架是一致的。
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引用次数: 0
Debugging Classical Ontologies Using Defeasible Reasoning Tools 使用可失败推理工具调试经典本体
Simone Coetzer, K. Britz
A successful application of ontologies relies on representing as much accurate and relevant domain knowledge as possible, while maintaining logical consistency. As the successful implementation of a real-world ontology is likely to contain many concepts and intricate relationships between the concepts, it is necessary to follow a methodology for debugging and refining the ontology. Many ontology debugging approaches have been developed to help the knowledge engineer pinpoint the cause of logical inconsistencies and rectify them in a strategic way. We show that existing debugging approaches can lead to unintuitive results, which may lead the knowledge engineer to opt for deleting potentially crucial and nuanced knowledge. We provide a methodological and design foundation for weakening faulty axioms in a strategic way using defeasible reasoning tools. Our methodology draws from Rodler’s interactive ontology debugging approach and extends this approach by creating a methodology to systematically find conflict resolution recommendations. Importantly, our goal is not to convert a classical ontology to a defeasible ontology. Rather, we use the definition of exceptionality of a concept, which is central to the semantics of defeasible description logics, and the associated algorithm to determine the extent of a concept’s exceptionality (their ranking); then, starting with the statements containing the most general concepts (the least exceptional concepts) weakened versions of the original statements are constructed; this is done until all inconsistencies have been resolved.
本体的成功应用依赖于表示尽可能准确和相关的领域知识,同时保持逻辑一致性。由于现实世界本体的成功实现可能包含许多概念和概念之间复杂的关系,因此有必要遵循一种调试和改进本体的方法。已经开发了许多本体调试方法来帮助知识工程师查明逻辑不一致的原因,并以战略的方式纠正它们。我们表明,现有的调试方法可能导致不直观的结果,这可能导致知识工程师选择删除潜在的关键和微妙的知识。我们提供了一个方法和设计基础,以削弱错误的公理在一个战略的方式,使用可行的推理工具。我们的方法借鉴了Rodler的交互式本体调试方法,并通过创建一种方法来系统地找到解决冲突的建议,从而扩展了该方法。重要的是,我们的目标不是将经典本体转换为可推翻的本体。相反,我们使用概念的异常定义,这是可否定描述逻辑语义的核心,以及相关算法来确定概念的异常程度(它们的排名);然后,从包含最一般概念(最少例外概念)的语句开始,构建原始语句的弱化版本;直到所有不一致的问题都得到解决为止。
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引用次数: 1
Formal Ontology in Information Systems - Proceedings of the Twelfth International Conference, FOIS 2021, Bozen-Bolzano, Italy, September 11-18, 2021 信息系统中的形式本体——第十二届国际会议论文集,2021年FOIS,意大利bozenbolzano, 2021年9月11-18日
B. Bennett, C. Fellbaum
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引用次数: 5
Towards a Unified Dispositional Framework for Realizable Entities 面向可实现实体的统一配置框架
Fumiaki Toyoshima, A. Barton, Ludger Jansen, J. Éthier
Realizable entities are properties that can be realized in processes of specific correlated types in which the bearer participates. It will be valuable to create a systematic classification of realizable entities because they are useful for various modeling purposes in ontologies. In this paper we outline a unifying framework for realizable entities (including dispositions and roles) in the upper ontology Basic Formal Ontology (BFO) that is theoretically underpinned by J. McKitrick’s pragmatic approach to dispositions. In particular, we develop a formal ontological account of “extrinsic dispositions” and illustrate its potential applications with clarification of functions and roles in BFO.
可变现实体是指可以在持票人参与的特定相关类型的过程中实现的属性。创建可实现实体的系统分类将是有价值的,因为它们对本体中的各种建模目的很有用。在本文中,我们概述了上层本体基本形式本体(BFO)中可实现实体(包括配置和角色)的统一框架,该框架在理论上以J. McKitrick的配置语用方法为基础。特别是,我们发展了“外在倾向”的正式本体论解释,并通过澄清BFO中的功能和角色来说明其潜在的应用。
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引用次数: 6
Capturing the Basics of the GDPR in a Well-Founded Legal Domain Modular Ontology 在一个建立良好的法律领域模块化本体中获取GDPR的基础知识
M. E. Ghosh, H. Abdulrab
The primary goal of the General Data Protection Regulation (GDPR) is to regulate the rights and duties of citizens and organizations over personal data protection. Implementing the GDPR is recently gaining much importance for legal reasoning and compliance checking purposes. In this work, we aim to capture the basics of GDPR in a well-founded legal domain modular ontology named OPPD (Ontology for the Protection of Personal Data). Ontology-Driven Conceptual Modeling (ODCM), ontology layering, modularization, and reuse processes are applied. These processes aim to support the ontology engineer in overcoming the complexity of the legal knowledge and developing an ontology model faithful to reality. ODCM is used for grounding OPPD in the Unified Foundational Ontology (UFO). Ontology modularization and layering aim to simplify the ontology building process. Ontology reuse focuses on selecting and reusing Conceptual Ontology Patterns (COPs) from UFO and the legal core ontology UFO-L. OPPD intends to overcome the lack of a representation of legal procedures that most ontologies encountered. The potential use of OPPD is proposed to formalize the GDPR rules by combining ontological reasoning and Logic Programming.
《通用数据保护条例》(GDPR)的主要目标是规范公民和组织在个人数据保护方面的权利和义务。实施GDPR最近在法律推理和合规性检查方面变得越来越重要。在这项工作中,我们的目标是在一个名为OPPD(个人数据保护本体)的有充分基础的法律领域模块化本体中捕获GDPR的基础知识。应用了本体驱动概念建模(ODCM)、本体分层、模块化和重用过程。这些过程旨在支持本体工程师克服法律知识的复杂性,建立一个忠实于现实的本体模型。ODCM用于在UFO (Unified Foundational Ontology)中接地OPPD。本体的模块化和分层旨在简化本体的构建过程。本体重用的重点是从UFO和法律核心本体UFO- l中选择和重用概念本体模式(cop)。OPPD打算克服大多数本体遇到的缺乏法律程序表示的问题。通过本体推理和逻辑编程的结合,提出了OPPD在GDPR规则形式化中的潜在应用。
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引用次数: 0
Semantic Analysis of Winograd Schema No. 1 Winograd图式1的语义分析
B. Bennett
The Winograd Schema Challenge is a general test for Artificial Intelligence, based on problems of pronoun reference resolution. I investigate the semantics and interpretation of Winograd Schemas, concentrating on the original and most famous example. This study suggests that a rich ontology, detailed commonsense knowledge as well as special purpose inference mechanisms are all required to resolve just this one example. The analysis supports the view that a key factor in the interpretation and disambiguation of natural language is the preference for coherence. This preference guides the resolution of co-reference in relation to both explicitly mentioned entities and also implicit entities that are required to form an interpretation of what is being described. I suggest that assumed identity of implicit entities arises from the expectation of coherence and provides a key mechanism that underpins natural language understanding. I also argue that conceptual ontologies can play a decisive role not only in directly determining pronoun references but also in identifying implicit entities and implied relationships that bind together components of a sentence.
Winograd模式挑战是人工智能的通用测试,基于代词指代解决问题。我研究了Winograd schema的语义和解释,主要集中在最原始和最著名的例子上。该研究表明,解决这一个例子需要丰富的本体、详细的常识性知识以及专用的推理机制。分析支持了自然语言的解释和消歧的一个关键因素是对连贯的偏好。这种偏好指导了与明确提到的实体和隐式实体相关的共同引用的解决,隐式实体需要形成对所描述内容的解释。我认为,隐性实体的假定同一性源于对连贯性的期望,并提供了支持自然语言理解的关键机制。我还认为,概念本体论不仅在直接确定代词指称方面发挥决定性作用,而且在识别将句子成分结合在一起的隐含实体和隐含关系方面也发挥决定性作用。
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引用次数: 1
期刊
Formal ontology in information systems : proceedings of the ... International Conference. FOIS (Conference)
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