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A novel machine learning-based immune prognostic signature for improving clinical outcomes and guiding therapy in colorectal cancer: an integrated bioinformatics and experimental study. 一种新的基于机器学习的免疫预后特征,用于改善结直肠癌的临床结果和指导治疗:一项综合生物信息学和实验研究。
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-10 DOI: 10.1186/s12885-025-13437-0
Yuanchun Zhao, Dexu Xun, Jiajia Chen, Xin Qi

Immune cells are pivotal components in the tumor microenvironment (TME), which can interact with tumor cells and significantly influence cancer progression and therapeutic outcomes. Therefore, classifying cancer patients based on the status of immune cells within the TME is increasingly recognized as an effective approach to identify prognostic biomarkers, paving the way for more effective and personalized cancer treatments. Considering the high incidence and mortality of colorectal cancer (CRC), in this study, an integrated machine learning survival framework incorporating 93 different algorithmic combinations was utilized to determine the optimal strategy for developing an immune-related prognostic signature (IRPS) based on the average C-index across the four CRC cohorts. Notably, IRPS was demonstrated to be an independent risk factor for predicting the survival outcomes of CRC patients, showing superior performance compared to traditional clinical features and 63 published signatures in both training and validation cohorts. Furthermore, CRC patients classified in the low-risk group according to the IRPS showed higher sensitivity to immunotherapy than those in the high-risk group, suggesting that low-risk patients are more likely to benefit from immunotherapy. Through in silico screening of potential compounds, dasatinib, vinblastine, and YM-155 were identified as potential therapeutic agents for high-risk CRC patients. In vitro studies demonstrated that knockdown of APCDD1, a key component of the IRPS, inhibited the proliferation, migration and invasion of HT-29 cells and promoted their apoptosis. Thus, the IRPS serve as a powerful tool for predicting patient prognosis, immunotherapy response and candidate drugs, thereby enhancing clinical decision-making and treatment evaluation of CRC.

免疫细胞是肿瘤微环境(tumor microenvironment, TME)的关键组成部分,可以与肿瘤细胞相互作用,显著影响肿瘤的进展和治疗结果。因此,基于TME内免疫细胞的状态对癌症患者进行分类越来越被认为是识别预后生物标志物的有效方法,为更有效和个性化的癌症治疗铺平了道路。考虑到结直肠癌(CRC)的高发病率和死亡率,在本研究中,利用包含93种不同算法组合的集成机器学习生存框架来确定基于四个CRC队列的平均c -指数开发免疫相关预后特征(IRPS)的最佳策略。值得注意的是,IRPS被证明是预测结直肠癌患者生存结局的独立危险因素,与传统临床特征和63个已发表的训练和验证队列相比,表现出优越的性能。此外,根据IRPS划分为低危组的CRC患者对免疫治疗的敏感性高于高危组,提示低危患者更有可能从免疫治疗中获益。通过对潜在化合物的计算机筛选,达沙替尼、长春花碱和YM-155被确定为高危CRC患者的潜在治疗药物。体外研究表明,敲低IRPS的关键成分APCDD1可抑制HT-29细胞的增殖、迁移和侵袭,促进其凋亡。因此,IRPS可作为预测患者预后、免疫治疗反应和候选药物的有力工具,从而加强CRC的临床决策和治疗评估。
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引用次数: 0
Personal and behavioural factors that influence physical activity in women living with metastatic breast cancer: a qualitative interview study. 影响转移性乳腺癌患者身体活动的个人和行为因素:一项定性访谈研究
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-09 DOI: 10.1186/s12885-023-11475-0
Mark Liu, Sharon Kilbreath, Jasmine Yee, Jane Beith, Justin McNab, Elizabeth Dylke

Background: Women living with metastatic breast cancer can benefit from physical activity. Presently, there is an absence of research outside of quantitative investigations on the benefits of structured programs. To enable effective physical activity advice and services, it is important to understand factors that may facilitate or prevent engagement. We therefore explored with women with metastatic breast cancer: (i) personal and behavioural factors that influenced physical activity, and (ii) the role of healthcare services in influencing engagement in being physically active.

Methods: Recruitment took place at a metropolitan cancer centre from November 2019 to January 2020. Women living with metastatic breast cancer were asked to participate in semi-structured interviews about physical activity, covering health-specific factors, goals, barriers, enablers, and interests. Interviews were recorded, transcribed and thematically analysed.

Results: Twenty-three women completed the interview, with a median age of 60 years (IQR: 20) and median time since metastatic diagnosis of 3.3 years (IQR: 3.0). Physical activity ranged from regular participation in structured exercise to simple incidental activity. Seven themes organised into three categories were identified. The category 'personal context' incorporated themes on: (1) both cancer and non-cancer related health factors; (2) time, work and family factors; and (3) exercise history and preferences. The category 'strategies for physical activity' incorporated themes on: (4) self-efficacy, and (5) routine and incidental activity. The category 'role of health and physical activity services' incorporated themes on: (6) tailored education and services, and (7) specific metastatic cancer services and considerations.

Conclusions: Participants expressed diverse experiences with physical activity, with common notions on how physical activity is beneficial but difficult in which to adhere. Whilst some barriers to engagement in physical activity were unique to having cancer, many were not specific to metastatic breast cancer. For example, some participants emphasised specific considerations resulting from their disease, while others primarily reported on general factors such as being time-poor or having conflicting priorities. A patient-centred approach tailored to this group's health and behavioural context may be effective for women who are currently inactive to engage in physical activity.

背景:患有转移性乳腺癌的女性可以从体育锻炼中获益。目前,除了对结构化课程的效益进行定量调查外,还缺乏相关研究。为了提供有效的身体活动建议和服务,了解可能促进或阻止参与的因素是很重要的。因此,我们对患有转移性乳腺癌的女性进行了研究:(i)影响身体活动的个人和行为因素,以及(ii)医疗服务在影响参与身体活动方面的作用。方法:招募于2019年11月至2020年1月在大都会癌症中心进行。患有转移性乳腺癌的妇女被要求参加关于身体活动的半结构化访谈,包括健康特定因素、目标、障碍、促进因素和兴趣。采访被记录、转录并进行主题分析。结果:23名女性完成了访谈,中位年龄为60岁(IQR: 20),中位转移诊断时间为3.3年(IQR: 3.0)。身体活动的范围从定期参加有组织的锻炼到简单的偶然活动。确定了分为三类的七个主题。“个人情况”类别包括以下主题:(1)癌症和非癌症相关的健康因素;(2)时间、工作和家庭因素;(3)运动历史和偏好。“体育活动策略”这一类别包含以下主题:(4)自我效能感;(5)日常活动和偶然活动。“健康和体育活动服务的作用”类别纳入了以下主题:(6)量身定制的教育和服务,以及(7)特定的转移性癌症服务和考虑因素。结论:参与者对体育活动表达了不同的经历,对体育活动如何有益但难以坚持的看法是一致的。虽然参与体育活动的一些障碍是癌症患者所特有的,但许多不是转移性乳腺癌所特有的。例如,一些与会者强调了因其疾病而引起的具体考虑,而其他与会者则主要报告了诸如时间不够或优先事项相互冲突等一般因素。针对这一群体的健康和行为情况量身定制的以病人为中心的方法,可能对目前不参加体育活动的妇女有效。
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引用次数: 0
Editorial Expression of Concern: The Src inhibitor dasatinib accelerates the differentiation of human bone marrow-derived mesenchymal stromal cells into osteoblasts. 编辑关注:Src抑制剂达沙替尼加速人骨髓源间充质基质细胞向成骨细胞的分化。
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-09 DOI: 10.1186/s12885-025-13460-1
Hichame Id Boufker, Laurence Lagneaux, Mehdi Najar, Martine Piccart, Ghanem Ghanem, Jean-Jacques Body, Fabrice Journé
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引用次数: 0
Expression of cytokeratin 19 in prostatic adenocarcinoma: a systematic review. 细胞角蛋白19在前列腺癌中的表达:一项系统综述。
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-09 DOI: 10.1186/s12885-025-13456-x
Sina Shahshenas, Seyyed Mohammad Hosseini, Hossein Yarmohammadi, Masood Soltanipur, Mohammadreza Jalali Nadoushan

Background: Cytokeratins are intracellular proteins known as diagnostic biomarkers or prognostic factors for certain cancers. Cytokeratin 19 (CK-19) expression has been proven to have prognostic value for some cancers, but its relationship with others, such as prostate cancer (PCa), remains unclear. This systematic review article aimed to examine the relationship between CK-19 expression and prostate adenocarcinoma (PAC).

Methods: To include the eligible studies that detected CK-19 expression in PAC, published articles since June 2024 were found using PubMed, Scopus, and Web of Science databases. The "prostate cancer" and "cytokeratin 19" keywords and their Mesh term were used for search databases. Data from the included articles were extracted and tabulated. This study was performed using the PRISMA guidelines, and the JBI checklist was used for the quality assessment. The study protocol was registered in PROSPERO under the "CRD42023472637" code.

Results: Twenty-one studies were included. Eleven studies used reverse transcription polymerase chain reaction (RT-PCR) to investigate CK-19 expression, four used immunohistochemistry (IHC) staining, three used both one-step nucleic acid amplification (OSNA) and hematoxylin and eosin (H&E) methods, and three used the electrochemiluminescence (ECL) technique. CK-19 expression was detected in 301 patients among 619 patients. Additionally, only five out of 80 healthy donors were positive for CK-19 expression.

Conclusion: Available evidence indicates a correlation between CK-19 expression and PAC progression, with higher CK-19 levels associated with advanced stages and worse prognosis. The overall evidence suggests that CK-19 could serve as a diagnostic and prognostic marker in PAC.

背景:细胞角蛋白是一种细胞内蛋白,被认为是某些癌症的诊断性生物标志物或预后因素。细胞角蛋白19 (CK-19)的表达已被证明对某些癌症具有预后价值,但其与前列腺癌(PCa)等其他癌症的关系尚不清楚。本文旨在探讨CK-19表达与前列腺癌(PAC)的关系。方法:通过PubMed、Scopus和Web of Science数据库检索2024年6月以来发表的检测到PAC中CK-19表达的文章,纳入符合条件的研究。使用“前列腺癌”和“细胞角蛋白19”关键词及其Mesh词进行检索数据库。从纳入的文章中提取数据并制成表格。本研究采用PRISMA指南进行,并使用JBI检查表进行质量评估。该研究方案已在PROSPERO注册,代码为“CRD42023472637”。结果:纳入21项研究。11项研究采用逆转录聚合酶链反应(RT-PCR)检测CK-19的表达,4项研究采用免疫组化(IHC)染色,3项研究采用一步核酸扩增(OSNA)和苏木精伊红(H&E)方法,3项研究采用电化学发光(ECL)技术。619例患者中有301例检测到CK-19表达。此外,80名健康供体中只有5名CK-19表达阳性。结论:现有证据表明,CK-19表达与PAC进展相关,且CK-19水平越高,病程越晚期,预后越差。综上所述,CK-19可作为PAC的诊断和预后指标。
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引用次数: 0
The expression of exosomal and cellular miRNAs in predicting oxaliplatin resistance in colorectal cancer cells: an in silico and in vitro study. 外泌体和细胞mirna在预测结直肠癌细胞奥沙利铂耐药中的表达:一项计算机和体外研究。
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-09 DOI: 10.1186/s12885-024-13392-2
Hoda Deli, Zeynab Vakili-Ghartavol, Yazdan Asgari, Gholamreza Tavoosidana, Ebrahim Eftekhar, Mohammad Hossein Ghahremani

Background: Colorectal cancer (CRC) is a common gastrointestinal cancer, and even though oxaliplatin chemotherapy is effective, there is a high likelihood of relapse, indicating the presence of oxaliplatin-resistant CRC. Therefore, it is crucial to comprehend the molecular mechanisms of oxaliplatin resistance and develop effective strategies to counter drug resistance. Numerous studies have demonstrated the close association between microRNAs (miRNAs) and drug resistance in CRC. In this study, we aimed to identify the essential exosomal and cellular miRNA related to oxaliplatin resistance in the CRC cell line HCT-116.

Methods: The miRNA expression profile of CRC cells with resistance to oxaliplatin was analyzed. The effectiveness of diagnostics and biomarker potency of miRNAs were evaluated by receiver operating characteristic (ROC) analysis. Target miRNAs were identified, and the enrichment analysis was assessed based on Gene Ontology (GO), Reactome, and Human Disease Ontology (DO). In vitro experiments, oxaliplatin-resistant HCT-116 cells (HCT116-OXA) were developed, and the exosomes were isolated and characterized from HCT116-OXA and HCT116 cells. The expression of the selected miRNAs was evaluated in HCT116-OXA cells and their exosomes, and they were compared to HCT-116 cells using quantitative real-time PCR.

Results: This study revealed that a combination of miR-4326, miR-3615, miR-7974, miR-130b-3p, and miR-454-3p exhibited the highest area under the curve (AUC), sensitivity, specificity, and superior diagnostic and predictive performance. In vitro experiments, HCT116-OXA cells displayed reduced early and late apoptosis, a bypass of S phase arrest, prolonged doubling time, and higher IC50 compared to parental cells. The expression of miR-454-3p, miR-130b-3p, miR-7974, miR-3615, and miR-4326 was decreased in HCT116-OXA cells as compared to sensitive cells. However, a significantly higher expression of miR-130b-3p and miR-4326 was observed in the isolated exosomes of HCT116-OXA cells as compared to the sensitive cells.

Conclusions: The low expression of miR-454-3p, miR-7974, and miR-3615 in CRC cells or high expression of miR-130b-3p and miR-4326 in isolated exosomes could predict the response to oxaliplatin therapy. This indicates the potential of these specific miRNAs to serve as predictive markers for the response to oxaliplatin therapy.

背景:结直肠癌(Colorectal cancer, CRC)是一种常见的胃肠道肿瘤,尽管奥沙利铂化疗有效,但复发的可能性很高,提示存在奥沙利铂耐药结直肠癌。因此,了解奥沙利铂耐药的分子机制,制定有效的耐药策略至关重要。大量研究表明,microRNAs (miRNAs)与结直肠癌耐药密切相关。在这项研究中,我们旨在鉴定CRC细胞系HCT-116中与奥沙利铂耐药相关的重要外泌体和细胞miRNA。方法:分析奥沙利铂耐药结直肠癌细胞的miRNA表达谱。通过受试者工作特征(ROC)分析评估mirna的诊断有效性和生物标志物效力。鉴定目标mirna,并基于Gene Ontology (GO)、Reactome和Human Disease Ontology (DO)对富集分析进行评估。在体外实验中,培养了奥沙利铂耐药HCT-116细胞(HCT116- oxa),并从HCT116- oxa和HCT116细胞中分离并鉴定了外泌体。在HCT116-OXA细胞及其外泌体中评估所选mirna的表达,并使用实时荧光定量PCR将其与HCT-116细胞进行比较。结果:本研究显示,miR-4326、miR-3615、miR-7974、miR-130b-3p和miR-454-3p的组合具有最高的曲线下面积(AUC)、敏感性、特异性以及优越的诊断和预测性能。体外实验显示,与亲本细胞相比,HCT116-OXA细胞表现出早期和晚期凋亡减少,S期阻滞绕过,倍增时间延长,IC50更高。与敏感细胞相比,HCT116-OXA细胞中miR-454-3p、miR-130b-3p、miR-7974、miR-3615和miR-4326的表达降低。然而,在HCT116-OXA细胞的分离外泌体中,miR-130b-3p和miR-4326的表达明显高于敏感细胞。结论:CRC细胞中miR-454-3p、miR-7974和miR-3615的低表达或分离的外泌体中miR-130b-3p和miR-4326的高表达可以预测对奥沙利铂治疗的反应。这表明这些特异性mirna有潜力作为对奥沙利铂治疗反应的预测标志物。
{"title":"The expression of exosomal and cellular miRNAs in predicting oxaliplatin resistance in colorectal cancer cells: an in silico and in vitro study.","authors":"Hoda Deli, Zeynab Vakili-Ghartavol, Yazdan Asgari, Gholamreza Tavoosidana, Ebrahim Eftekhar, Mohammad Hossein Ghahremani","doi":"10.1186/s12885-024-13392-2","DOIUrl":"10.1186/s12885-024-13392-2","url":null,"abstract":"<p><strong>Background: </strong>Colorectal cancer (CRC) is a common gastrointestinal cancer, and even though oxaliplatin chemotherapy is effective, there is a high likelihood of relapse, indicating the presence of oxaliplatin-resistant CRC. Therefore, it is crucial to comprehend the molecular mechanisms of oxaliplatin resistance and develop effective strategies to counter drug resistance. Numerous studies have demonstrated the close association between microRNAs (miRNAs) and drug resistance in CRC. In this study, we aimed to identify the essential exosomal and cellular miRNA related to oxaliplatin resistance in the CRC cell line HCT-116.</p><p><strong>Methods: </strong>The miRNA expression profile of CRC cells with resistance to oxaliplatin was analyzed. The effectiveness of diagnostics and biomarker potency of miRNAs were evaluated by receiver operating characteristic (ROC) analysis. Target miRNAs were identified, and the enrichment analysis was assessed based on Gene Ontology (GO), Reactome, and Human Disease Ontology (DO). In vitro experiments, oxaliplatin-resistant HCT-116 cells (HCT116-OXA) were developed, and the exosomes were isolated and characterized from HCT116-OXA and HCT116 cells. The expression of the selected miRNAs was evaluated in HCT116-OXA cells and their exosomes, and they were compared to HCT-116 cells using quantitative real-time PCR.</p><p><strong>Results: </strong>This study revealed that a combination of miR-4326, miR-3615, miR-7974, miR-130b-3p, and miR-454-3p exhibited the highest area under the curve (AUC), sensitivity, specificity, and superior diagnostic and predictive performance. In vitro experiments, HCT116-OXA cells displayed reduced early and late apoptosis, a bypass of S phase arrest, prolonged doubling time, and higher IC<sub>50</sub> compared to parental cells. The expression of miR-454-3p, miR-130b-3p, miR-7974, miR-3615, and miR-4326 was decreased in HCT116-OXA cells as compared to sensitive cells. However, a significantly higher expression of miR-130b-3p and miR-4326 was observed in the isolated exosomes of HCT116-OXA cells as compared to the sensitive cells.</p><p><strong>Conclusions: </strong>The low expression of miR-454-3p, miR-7974, and miR-3615 in CRC cells or high expression of miR-130b-3p and miR-4326 in isolated exosomes could predict the response to oxaliplatin therapy. This indicates the potential of these specific miRNAs to serve as predictive markers for the response to oxaliplatin therapy.</p>","PeriodicalId":9131,"journal":{"name":"BMC Cancer","volume":"25 1","pages":"46"},"PeriodicalIF":3.4,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11715296/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142944624","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploring the potential of gemcitabine-metal-organic frameworks in combating pancreatic cancer under ketogenic conditions. 探索吉西他滨-金属-有机框架在生酮条件下对抗胰腺癌的潜力。
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-09 DOI: 10.1186/s12885-024-13397-x
Samira Nekoufar, Marjan Ghorbani, Sahar Safaei, Gholamreza Alinezhadi Khosroushahi, Farzad Izak Shirian, Behzad Baradaran, Masoumeh Tavakoli-Yaraki

Background: Inadequate treatment responses, chemotherapy resistance, significant heterogeneity, and lengthy treatment durations create an urgent need for new pancreatic cancer therapies. This study aims to investigate the effectiveness of gemcitabine-loaded nanoparticles enclosed in an organo-metallic framework under ketogenic conditions in inhibiting the growth of MIA-PaCa-2 cells.

Methods: Gemcitabine was encapsulated in Metal-organic frameworks (MOFs) and its morphology and size distribution were examined using transmission electron microscopy (TEM) and Dynamic light scattering (DLS) with further characterization including FTIR analysis. Various drug groups were established to evaluate their influences on cell cytotoxicity, apoptosis rate, cell cycle distribution, levels of superoxide dismutase (SOD), glutathione peroxidase (GPx), malondialdehyde (MDA), and cell migration.

Results: The gemcitabine-MOF was thoroughly analyzed to determine its size, morphology, and chemical composition, confirming its successful preparation. The treatment results showed an increase in the number of apoptotic cells following gemcitabine-MOF treatment, which was found to be associated with cell cycle arrest in the sub-G1 phase. Moreover, these treatments also resulted in reduced cell migration, decreased activity of antioxidant enzymes (SOD, GPx), and increased accumulation of MDA. Additionally, when exposed to ketogenic conditions (where beta-hydroxybutyrate is present in a glucose-limited medium), there was a further increase in cell cycle arrest, accompanied by a more pronounced decrease in SOD and GPx activity, as well as decreased migration.

Conclusion: The use of metal-organic framework to encapsulate gemcitabine yielded notable pro-apoptotic effects in MIA-PaCa-2 cells with which ketogenic conditions had a synergistic effect that can hold promise for improving therapeutic options.

背景:治疗反应不足、化疗耐药、显著异质性和治疗持续时间长,迫切需要新的胰腺癌治疗方法。本研究旨在探讨在生酮条件下,包裹在有机金属框架内的吉西他滨负载纳米颗粒抑制MIA-PaCa-2细胞生长的有效性。方法:将吉西他滨包封在金属有机骨架(MOFs)中,利用透射电子显微镜(TEM)和动态光散射(DLS)观察其形貌和尺寸分布,并进行FTIR分析等表征。建立不同药物组,评估其对细胞毒性、凋亡率、细胞周期分布、超氧化物歧化酶(SOD)、谷胱甘肽过氧化物酶(GPx)、丙二醛(MDA)水平和细胞迁移的影响。结果:对吉西他滨- mof进行了彻底的分析,确定了其大小、形态和化学成分,证实了其制备成功。治疗结果显示,吉西他滨- mof治疗后凋亡细胞数量增加,这与细胞周期阻滞在亚g1期有关。此外,这些处理还导致细胞迁移减少,抗氧化酶(SOD, GPx)活性降低,MDA积累增加。此外,当暴露于生酮条件下(β -羟基丁酸盐存在于葡萄糖限制的培养基中),细胞周期停滞进一步增加,伴随着SOD和GPx活性更明显的下降,以及迁移减少。结论:使用金属有机框架包被吉西他滨在MIA-PaCa-2细胞中产生显著的促凋亡作用,生酮条件与MIA-PaCa-2细胞具有协同作用,有望改善治疗方案。
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引用次数: 0
Diagnostic role of circulating long non-coding RNA LINC00312 in patients with non-small cell lung cancer: a retrospective study. 循环长链非编码RNA LINC00312在非小细胞肺癌患者中的诊断作用:一项回顾性研究
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-09 DOI: 10.1186/s12885-024-13393-1
Ruoqian Zhang, Yan Jiang, Jing Gu, Xilin Zhang, Yanping Xie

Background: LINC00312 has shown to play a suppressive role in the development and progression of non-small cell lung cancer (NSCLC). However, the expression pattern and diagnostic role of circulating LINC00312 in NSCLC remain to be confused.

Methods: A total of 319 patients diagnosed with NSCLC and 180 healthy volunteers were enrolled from the First Affiliated Hospital of Huzhou University between January, 2022 and December, 2023. The participates were randomly assigned into the training and validation groups with a ratio of 6:4, while the remaining was named as the exosomal group. Reverse transcription-quantitative PCR (RT-qPCR) was employed to investigate the expression pattern of LINC00312 in NSCLC tissues, serum samples and cell lines. Receiver operating characteristic (ROC) curve analysis was carried out for distinguishing NSCLC from healthy volunteers.

Results: Here, we revealed that LINC00312 was lowly expressed in NSCLC and low LINC00312 expression manifested a poor prognosis. Additionally, compared with the healthy volunteer group, a reduction of circulating LINC00312 in patients with NSCLC was observed in both the training and validation groups. Further correlation analysis indicated that circulating LINC00312 expression was tightly associated with lymph node metastasis, cancer thrombus, spread through air space (STAS) status and pathological type. Moreover, circulating LINC00312 showed a good performance to distinguish NSCLC from healthy volunteers with a higher sensitivity and specificity values. Lastly, exosomal LINC00312 level was also decreased in NSCLC compared with in healthy volunteers.

Conclusions: Taken together, these data unveil that circulating LINC00312 was notably downregulated in NSCLC, offering a novel non-invasive marker for diagnosis of NSCLC.

背景:LINC00312已被证明在非小细胞肺癌(NSCLC)的发生和进展中发挥抑制作用。然而,循环LINC00312在非小细胞肺癌中的表达模式和诊断作用尚不清楚。方法:选取湖州学院第一附属医院于2022年1月至2023年12月诊断为NSCLC的319例患者和180名健康志愿者。参与者按6:4的比例随机分为训练组和验证组,其余为外泌体组。采用逆转录定量PCR (RT-qPCR)方法研究LINC00312在非小细胞肺癌组织、血清样本和细胞系中的表达规律。进行受试者工作特征(ROC)曲线分析,以区分非小细胞肺癌与健康志愿者。结果:我们发现LINC00312在NSCLC中低表达,低表达预后较差。此外,与健康志愿者组相比,训练组和验证组均观察到NSCLC患者中循环LINC00312的减少。进一步的相关分析表明,循环中LINC00312的表达与淋巴结转移、癌栓形成、STAS状态及病理分型密切相关。此外,循环LINC00312在区分非小细胞肺癌和健康志愿者方面表现良好,具有较高的敏感性和特异性值。最后,与健康志愿者相比,NSCLC的外泌体LINC00312水平也有所降低。结论:综上所述,这些数据揭示了循环LINC00312在非小细胞肺癌中显著下调,为非小细胞肺癌的诊断提供了一种新的无创标志物。
{"title":"Diagnostic role of circulating long non-coding RNA LINC00312 in patients with non-small cell lung cancer: a retrospective study.","authors":"Ruoqian Zhang, Yan Jiang, Jing Gu, Xilin Zhang, Yanping Xie","doi":"10.1186/s12885-024-13393-1","DOIUrl":"10.1186/s12885-024-13393-1","url":null,"abstract":"<p><strong>Background: </strong>LINC00312 has shown to play a suppressive role in the development and progression of non-small cell lung cancer (NSCLC). However, the expression pattern and diagnostic role of circulating LINC00312 in NSCLC remain to be confused.</p><p><strong>Methods: </strong>A total of 319 patients diagnosed with NSCLC and 180 healthy volunteers were enrolled from the First Affiliated Hospital of Huzhou University between January, 2022 and December, 2023. The participates were randomly assigned into the training and validation groups with a ratio of 6:4, while the remaining was named as the exosomal group. Reverse transcription-quantitative PCR (RT-qPCR) was employed to investigate the expression pattern of LINC00312 in NSCLC tissues, serum samples and cell lines. Receiver operating characteristic (ROC) curve analysis was carried out for distinguishing NSCLC from healthy volunteers.</p><p><strong>Results: </strong>Here, we revealed that LINC00312 was lowly expressed in NSCLC and low LINC00312 expression manifested a poor prognosis. Additionally, compared with the healthy volunteer group, a reduction of circulating LINC00312 in patients with NSCLC was observed in both the training and validation groups. Further correlation analysis indicated that circulating LINC00312 expression was tightly associated with lymph node metastasis, cancer thrombus, spread through air space (STAS) status and pathological type. Moreover, circulating LINC00312 showed a good performance to distinguish NSCLC from healthy volunteers with a higher sensitivity and specificity values. Lastly, exosomal LINC00312 level was also decreased in NSCLC compared with in healthy volunteers.</p><p><strong>Conclusions: </strong>Taken together, these data unveil that circulating LINC00312 was notably downregulated in NSCLC, offering a novel non-invasive marker for diagnosis of NSCLC.</p>","PeriodicalId":9131,"journal":{"name":"BMC Cancer","volume":"25 1","pages":"47"},"PeriodicalIF":3.4,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11721336/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142944562","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Astaxanthin-loaded PLGA nanoparticles inhibit survival of MKN-45 gastric cancer cell line by modulating JAK2/STAT3/mTOR/PI3K pathway. 载虾青素的PLGA纳米颗粒通过调控JAK2/STAT3/mTOR/PI3K通路抑制MKN-45胃癌细胞株的存活。
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-09 DOI: 10.1186/s12885-024-13401-4
Mohammad Hossein YektaKooshali, Mahdieh SobhZahedi, Seyed Mohammad Taghi Razavi Tousi, Masoud Hamidi, Leila Modiri

Background/aims: Gastric cancer (GC) is a significant global health issue with high incidence rates and poor prognoses, ranking among the top prevalent cancers worldwide. Due to undesirable side effects and drug resistance, there is a pressing need for the development of novel therapeutic strategies. Understanding the interconnectedness of the JAK2/STAT3/mTOR/PI3K pathway in tumorigenesis and the role of Astaxanthin (ASX), a red ketocarotenoid member of xanthophylls and potent antioxidant and anti-tumor activity, can be effective for cancer treatments. This study aimed to investigate the effect of ASX-loaded nanoparticles on the survival of MKN-45 GC cells and the expression of JAK2/STAT3/mTOR/PI3K, offering insights into potential targeted therapies for GC.

Methods: The growth status and survival rate of MKN-45 GC cell lines were determined using the 3-[4,5-dimethylthiazol-2-yl]-2,5 diphenyl tetrazolium bromide(MTT) assay, and the optimal IC50 concentration of ASX, PLGA, and ASX + PLGA was estimated. Also, the clonogenic assay was performed to determine the reproductive power and colony formation of under-treatment cells. Apoptosis and necroptosis of cells were evaluated using acridine orange (AO) staining. The western blot assessed the protein's level of expression and intensity (JAK2/STAT3/mTOR/PI3K). SPSS version 16 software was used for statistical analysis, P-value was considered lower than 0.05.

Results: Based on the results, increasing concentrations of ASX and ASX + PLGA led to a decrease in the viability of MKN-45 cells compared to the control group (P < 0.001). This value was lower for cells treated with ASX + PLGA (P = 0.003). The IC50 values for each of the studied groups (ASX, ASX + PLGA, and PLGA) were 81.45 µg/ml, 51.45 µg/ml, and 3.383 mg/ml, respectively. The levels of expression and intensity of JAK2, STAT3, and mTOR proteins in the Western blotting analysis under ASX + PLGA treatment increased compared to the control group. Conversely, the levels of expression and intensity of P-JAK2, P-STAT3, and P-mTOR proteins in the ASX + PLGA treatment group decreased by 41%, 34%, 37%, and 43%, respectively, compared to the control group. Protein expression levels and intensities of JAK2, STAT3, and mTOR significantly increased when treated with PLGA, ASX, and ASX + PLGA compared to the control group (P < 0.001).

Conclusions: The encapsulation of ASX in PLGA nanoparticles enhances drug stability, enables targeted delivery, and allows for sustained release. This study highlights the therapeutic potential of ASX-loaded nanoparticles in targeting JAK2/STAT3/mTOR/PI3K pathways in GC treatment. Further research is needed to understand the mechanisms and clinical applications of this novel immunotherapy strategy.

背景/目的:胃癌(Gastric cancer, GC)是全球发病率高、预后差的重大健康问题,是世界范围内发病率最高的癌症之一。由于其不良的副作用和耐药性,迫切需要开发新的治疗策略。了解JAK2/STAT3/mTOR/PI3K通路在肿瘤发生中的相互联系以及虾青素(ASX)的作用,可以有效地治疗癌症。虾青素是叶黄素中的一种红色类酮胡萝卜素,具有强大的抗氧化和抗肿瘤活性。本研究旨在探讨asx负载纳米颗粒对MKN-45胃癌细胞存活和JAK2/STAT3/mTOR/PI3K表达的影响,为胃癌的潜在靶向治疗提供见解。方法:采用3-[4,5-二甲基噻唑-2-基]-2,5二苯基溴化四氮唑(MTT)法测定MKN-45 GC细胞株的生长状况和存活率,并估计ASX、PLGA和ASX + PLGA的最佳IC50浓度。此外,克隆实验进行了确定生殖能力和集落形成的处理不足的细胞。用吖啶橙(AO)染色观察细胞凋亡和坏死。western blot检测蛋白表达水平和强度(JAK2/STAT3/mTOR/PI3K)。采用SPSS 16版软件进行统计分析,认为p值< 0.05。结果:与对照组相比,ASX和ASX + PLGA浓度的增加导致MKN-45细胞活力下降(P结论:PLGA纳米颗粒包封ASX增强了药物稳定性,实现了靶向给药,并允许持续释放。这项研究强调了asx负载纳米颗粒靶向JAK2/STAT3/mTOR/PI3K通路在GC治疗中的治疗潜力。需要进一步的研究来了解这种新的免疫治疗策略的机制和临床应用。
{"title":"Astaxanthin-loaded PLGA nanoparticles inhibit survival of MKN-45 gastric cancer cell line by modulating JAK2/STAT3/mTOR/PI3K pathway.","authors":"Mohammad Hossein YektaKooshali, Mahdieh SobhZahedi, Seyed Mohammad Taghi Razavi Tousi, Masoud Hamidi, Leila Modiri","doi":"10.1186/s12885-024-13401-4","DOIUrl":"10.1186/s12885-024-13401-4","url":null,"abstract":"<p><strong>Background/aims: </strong>Gastric cancer (GC) is a significant global health issue with high incidence rates and poor prognoses, ranking among the top prevalent cancers worldwide. Due to undesirable side effects and drug resistance, there is a pressing need for the development of novel therapeutic strategies. Understanding the interconnectedness of the JAK2/STAT3/mTOR/PI3K pathway in tumorigenesis and the role of Astaxanthin (ASX), a red ketocarotenoid member of xanthophylls and potent antioxidant and anti-tumor activity, can be effective for cancer treatments. This study aimed to investigate the effect of ASX-loaded nanoparticles on the survival of MKN-45 GC cells and the expression of JAK2/STAT3/mTOR/PI3K, offering insights into potential targeted therapies for GC.</p><p><strong>Methods: </strong>The growth status and survival rate of MKN-45 GC cell lines were determined using the 3-[4,5-dimethylthiazol-2-yl]-2,5 diphenyl tetrazolium bromide(MTT) assay, and the optimal IC50 concentration of ASX, PLGA, and ASX + PLGA was estimated. Also, the clonogenic assay was performed to determine the reproductive power and colony formation of under-treatment cells. Apoptosis and necroptosis of cells were evaluated using acridine orange (AO) staining. The western blot assessed the protein's level of expression and intensity (JAK2/STAT3/mTOR/PI3K). SPSS version 16 software was used for statistical analysis, P-value was considered lower than 0.05.</p><p><strong>Results: </strong>Based on the results, increasing concentrations of ASX and ASX + PLGA led to a decrease in the viability of MKN-45 cells compared to the control group (P < 0.001). This value was lower for cells treated with ASX + PLGA (P = 0.003). The IC50 values for each of the studied groups (ASX, ASX + PLGA, and PLGA) were 81.45 µg/ml, 51.45 µg/ml, and 3.383 mg/ml, respectively. The levels of expression and intensity of JAK2, STAT3, and mTOR proteins in the Western blotting analysis under ASX + PLGA treatment increased compared to the control group. Conversely, the levels of expression and intensity of P-JAK2, P-STAT3, and P-mTOR proteins in the ASX + PLGA treatment group decreased by 41%, 34%, 37%, and 43%, respectively, compared to the control group. Protein expression levels and intensities of JAK2, STAT3, and mTOR significantly increased when treated with PLGA, ASX, and ASX + PLGA compared to the control group (P < 0.001).</p><p><strong>Conclusions: </strong>The encapsulation of ASX in PLGA nanoparticles enhances drug stability, enables targeted delivery, and allows for sustained release. This study highlights the therapeutic potential of ASX-loaded nanoparticles in targeting JAK2/STAT3/mTOR/PI3K pathways in GC treatment. Further research is needed to understand the mechanisms and clinical applications of this novel immunotherapy strategy.</p>","PeriodicalId":9131,"journal":{"name":"BMC Cancer","volume":"25 1","pages":"44"},"PeriodicalIF":3.4,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11715247/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142944594","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Quantifying intratumoral heterogeneity within sub-regions to predict high-grade patterns in clinical stage I solid lung adenocarcinoma. 量化子区域内肿瘤内异质性以预测临床I期实体肺腺癌的高级别模式。
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-09 DOI: 10.1186/s12885-025-13445-0
Zhichao Zuo, Jinqiu Deng, Wu Ge, Yinjun Zhou, Haibo Liu, Wei Zhang, Ying Zeng

Background: This study aims to quantify intratumoral heterogeneity (ITH) using preoperative CT image and evaluate its ability to predict pathological high-grade patterns, specifically micropapillary and/or solid components (MP/S), in patients diagnosed with clinical stage I solid lung adenocarcinoma (LADC).

Methods: In this retrospective study, we enrolled 457 patients who were postoperatively diagnosed with clinical stage I solid LADC from two medical centers, assigning them to either a training set (n = 304) or a test set (n = 153). Sub-regions within the tumor were identified using the K-means method. Both intratumoral ecological diversity features (hereafter referred to as ITH) and conventional radiomics (hereafter referred to as C-radiomics) were extracted to generate ITH scores and C-radiomics scores. Next, univariate and multivariate logistic regression analyses were employed to identify clinical-radiological (Clin-Rad) features associated with the MP/S (+) group for constructing the Clin-Rad classification. Subsequently, a hybrid model which presented as a nomogram was developed, integrating the Clin-Rad classification and ITH score. The performance of models was assessed using the receiver operating characteristic (ROC) curves, and the area under the curve (AUC), accuracy, sensitivity, and specificity were determined.

Results: The ITH score outperformed both C-radiomics scores and Clin-Rad classification, as evidenced by higher AUC values in the training set (0.820 versus 0.810 and 0.700, p = 0.049 and p = 0.031, respectively) and in the test set (0.805 versus 0.771 and 0.732, p = 0.041 and p = 0.025, respectively). Finally, the hybrid model consistently demonstrated robust predictive capabilities in identifying presence of MP/S components, achieving AUC of 0.830 in the training set and 0.849 in the test set (all p < 0.05).

Conclusion: The ITH derived from sub-region within the tumor has been shown to be a reliable predictor for MP/S (+) in clinical stage I solid LADC.

背景:本研究旨在通过术前CT图像量化瘤内异质性(ITH),并评估其预测临床I期实性肺腺癌(LADC)患者病理高级别模式,特别是微乳头状和/或实体成分(MP/S)的能力。方法:在这项回顾性研究中,我们从两个医疗中心招募了457例术后诊断为临床I期固体LADC的患者,将他们分配到训练集(n = 304)或测试集(n = 153)。使用K-means方法确定肿瘤内的子区域。提取肿瘤内生态多样性特征(以下简称ITH)和常规放射组学(以下简称C-radiomics),生成ITH评分和C-radiomics评分。接下来,采用单变量和多变量逻辑回归分析来确定与MP/S(+)组相关的临床放射学(clinr -rad)特征,以构建clinr -rad分类。随后,结合clind - rad分类和ITH评分,开发了一个以nomogram形式呈现的混合模型。采用受试者工作特征(ROC)曲线评估模型的性能,并确定曲线下面积(AUC)、准确性、灵敏度和特异性。结果:ITH评分优于C-radiomics评分和clind -rad分类,训练集(0.820比0.810和0.700,p = 0.049和p = 0.031)和测试集(0.805比0.771和0.732,p = 0.041和p = 0.025)的AUC值更高。最后,混合模型在识别MP/S成分的存在方面始终表现出强大的预测能力,在训练集中达到0.830的AUC,在测试集中达到0.849(均为p)结论:来自肿瘤内子区域的ITH已被证明是临床I期固体LADC MP/S(+)的可靠预测因子。
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引用次数: 0
Cancer-related health behaviors during the COVID 19 pandemic in geographically diverse samples across the US. 美国各地不同地理样本中COVID - 19大流行期间与癌症相关的健康行为
IF 3.4 2区 医学 Q2 ONCOLOGY Pub Date : 2025-01-09 DOI: 10.1186/s12885-024-13373-5
Breanna B Greteman, Allison Cole, Mary E Charlton, Jackilen Shannon, Deanna Kepka, Electra D Paskett, Evelinn A Borrayo, Jamie L Studts, Hayley S Thompson, Isabel Scarinci, Lynn Chollet Hinton, Elizabeth A Chrischilles, Crystal J Garcia-Auguste, Kaila Christini, Heather Aker, Jesse J Plascak, Felicity W K Harper, Monica L Baskin, Sejong Bae, Vishruti Pandya, Young-Il Kim, Babalola Faseru, Christie Befort, Hanluen Kuo, Mark Dignan, Juan Canedo, Victoria Champion, Bettina F Drake, Kia L Davis, Debra L Friedman, Mohamed I Elsaid, Scherezade K Mama, Wendy F Cohn

Background: The COVID-19 pandemic involved business closures (e.g., gyms), social distancing policies, and prolonged stressful situations that may have impacted engagement in health behaviors. Our study assessed changes in cancer-related health behaviors during the pandemic, specifically physical activity, fruit/vegetable intake, smoking/tobacco use, and alcohol consumption.

Methods: Eight cancer centers administered mailed/web-based/telephone surveys between June 2020 and March 2021. Surveys assessed demographics, perceptions on social distancing, and self-reported changes of behaviors (less/same/more) associated with cancer prevention or risk, e.g., physical activity, fruit/vegetable intake, tobacco/smoking use, and alcohol consumption. Descriptive analyses and logistic regression models assessed association of variables with behavior change.

Results: Most of the 21,911 respondents reported adhering to at least 4(of 5) social distancing measures (72%) and indicated social distancing was very/somewhat important to prevent the spread of COVID-19 (91%). 35% of respondents reported less physical activity, 11% reported less fruit/vegetable intake, 27% reported more smoking/tobacco use (among those who used tobacco/smoking products in past 30 days), and 23% reported more alcohol consumption (among those who reported at least 1 drink in past 30 days) than before the pandemic. Urban residence, younger age, female gender, and worse general health were associated with less physical activity, less fruit/vegetable intake, more smoking/tobacco use, and more alcohol intake. Higher educational attainment was associated with less physical activity and fruit/vegetable intake and more alcohol consumption. Reporting social distancing as important and adhering to more COVID-19 safety practices were associated with less physical activity and more alcohol consumption.

Conclusion: Our findings suggest that certain demographics and those who adhered to social distancing measures were more likely to self-report unfavorable changes in health behaviors during the pandemic. Future studies should examine if the behaviors returned to baseline following relief from pandemic restrictions, and if these behavior changes are associated with increased cancer incidence and mortality.

背景:2019冠状病毒病大流行涉及企业关闭(如健身房)、社会距离政策以及可能影响健康行为参与的长期压力情况。我们的研究评估了大流行期间癌症相关健康行为的变化,特别是身体活动、水果/蔬菜摄入量、吸烟/烟草使用和饮酒。方法:8个癌症中心在2020年6月至2021年3月期间进行了邮寄/网络/电话调查。调查评估了人口统计、对社交距离的看法,以及自我报告的与癌症预防或风险相关的行为变化(减少/相同/更多),例如身体活动、水果/蔬菜摄入量、烟草/吸烟使用和饮酒。描述性分析和逻辑回归模型评估变量与行为改变的关联。结果:在21911名受访者中,大多数人(72%)报告遵守了至少4项(5项)社交距离措施,并表示社交距离对防止COVID-19的传播非常/有些重要(91%)。35%的答复者报告身体活动减少,11%报告水果/蔬菜摄入量减少,27%报告吸烟/烟草使用(在过去30天内使用烟草/吸烟制品的人中)增加,23%报告饮酒量(在过去30天内报告至少喝一次酒的人中)比大流行前增加。居住在城市、年龄较小、女性和总体健康状况较差与体力活动较少、水果/蔬菜摄入较少、吸烟/烟草使用较多和饮酒较多有关。受教育程度越高,体力活动和水果/蔬菜摄入量越少,饮酒越多。报告社交距离很重要,并坚持更多的COVID-19安全措施,与体育活动减少和饮酒增加有关。结论:我们的研究结果表明,某些人口统计数据和坚持社会距离措施的人更有可能在大流行期间自我报告健康行为的不利变化。未来的研究应检查大流行限制解除后行为是否恢复到基线水平,以及这些行为变化是否与癌症发病率和死亡率增加有关。
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引用次数: 0
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