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Antioxidant, anti-acetylcholinesterase, and anti-amyloid-β peptide aggregations of hispolon and its analogs in vitro and improved learning and memory functions in scopolamine-induced ICR mice. 组蛋白及其类似物体外抗氧化、抗乙酰胆碱酯酶和抗淀粉样β肽聚集,并改善东莨菪碱诱导的ICR小鼠的学习和记忆功能。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-12-18 DOI: 10.1186/s40529-024-00443-x
Chang-Hang Yang, Cai-Wei Li, Yi-Yan Sie, Liang-Chieh Chen, Yu-Hsiang Yuan, Wen-Chi Hou

Background: Hispolon, one of bioactive phenolic compounds from a medicinal mushroom of sang-huang (Phellinus linteus) has been reported to exhibit anticancer and anti-inflammatory activities. The Alzheimer's disease (AD) is ranked one of the top ten leading causes of death worldwide. Little is known about the effects of hispolon on delaying AD progression.

Results: The hispolon (No.1) and its six structural analogs (No.2 to No.7) were assayed by antioxidant, anti-acetylcholinesterase activities and anti-amyloid-β1-42-peptide aggregations. The No.1, No.6, and No.7 were selected for further molecular docking with acetylcholinesterase and core fragments of amyloid-β-peptide, and also showed capacities to recover cell viabilities in methylglyoxal-treated SH-SY5Y cells and also to enhance neurite outgrowths in PC12 cells. The daily pre-treatments of No.1, No.6, and No.7 for 10-days (40 mg/kg/day) showed to improve learning dysfunctions in scopolamine-induced ICR mice by passive avoidance tests.

Conclusion: The hispolon in the fungus sang-huang might be beneficial to develop functional foods or as lead compounds for treating degenerative disorders.

背景:从药用蘑菇黄(Phellinus linteus)中提取的一种生物活性酚类化合物Hispolon已被报道具有抗癌和抗炎活性。阿尔茨海默病(AD)是全球十大主要死亡原因之一。我们对hispolon延缓AD进展的作用知之甚少。结果:用抗氧化活性、抗乙酰胆碱酯酶活性和抗淀粉样蛋白-β1-42肽聚集活性测定了组蛋白蛋白1号及其6个结构类似物(2 ~ 7号)。选择1号、6号和7号与乙酰胆碱酯酶和淀粉样β肽核心片段进行进一步的分子对接,也显示出在甲基乙二醛处理的SH-SY5Y细胞中恢复细胞活力的能力,并增强PC12细胞的神经突生长。被动回避试验显示,1号、6号和7号每日预处理(40 mg/kg/天)10 d后,东莨菪碱诱导的ICR小鼠学习功能障碍得到改善。结论:桑黄菌中的组蛋白可开发功能食品或作为治疗退行性疾病的先导化合物。
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引用次数: 0
Unveiling the ecological dominance of button mangrove (Conocarpus erectus L.) through microstructural and functional traits modifications across heterogenic environmental conditions. 异种环境条件下纽扣红树(Conocarpus erectus L.)微观结构和功能性状的改变揭示其生态优势性。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-11-29 DOI: 10.1186/s40529-024-00440-0
Ummar Iqbal, Akkasha Azam, Khawaja Shafique Ahmad, Sahar Mumtaz, Ansar Mehmood, Nargis Naz, Zartasha Usman, Hina Abbas, Muhammad Akram
<p><strong>Background: </strong>The button mangrove (Conocarpus erectus L.) is regarded as a peripheral species within mangrove communities. This particular species has the ability to thrive in regions that are arid or semiarid, where there is limited availability of nutrients. This study provides evidence of the ecological dominance of Conocarpus erectus across various habitats, highlighting its adaptability and success throughout the country of Pakistan. We collected twelve populations from four distinct ecological regions, including artificial forest plantations, agricultural fields, roadsides, and wastelands, offering a comprehensive assessment of C. erectus adaptability across diverse environmental contexts.</p><p><strong>Results: </strong>Forest plantation populations exhibited impressive shoot growth and moderate root lengths, with plants generally tall and well-weighted. Physiologically, they had moderate chlorophyll content and low carotenoid levels, with a balanced chlorophyll a/b ratio, indicating stable photosynthetic activity. Anatomically, these populations had thicker epidermal and cortical root layers but smaller vascular bundles and phloem regions. Stem and leaf structures were generally moderate in size, with thicker midribs and cortical layers in the leaves. Agricultural field populations showed robust shoot and root systems with balanced fresh and dry biomass. They exhibited high chlorophyll and carotenoid levels, indicating strong photosynthetic capacity. Root and stem anatomy revealed larger root areas, thicker cortex, and wide vascular bundles, reflecting enhanced structural development. Leaves from these populations had moderate midrib and cortical thickness, with larger stomatal areas, promoting efficient gas exchange. Roadside populations displayed deeper roots and reduced biomass production. These populations adapted to environmental stress through leaf expansion, with high leaf numbers and areas. Physiologically, populations had high chlorophyll content, with a high chlorophyll a/b ratio. Root and stem anatomy showed compact structures with smaller vascular bundles, indicating adaptation to harsher conditions. Leaf anatomy was moderate, with smaller vascular bundles and reduced water transport capacity. Wasteland populations exhibited poor growth and high shoot biomass despite small leaves. Physiologically, these populations had the highest total soluble protein and proline contents, reflecting stress adaptation. Anatomically, root and stem structures were variable, with some populations showing reduced cortical cell areas and smaller vascular bundles, indicating limited resource transport. Leaf structures had thicker lamina, thinner epidermal layers, and lower stomatal densities, reflecting adaptation to nutrient-poor soils.</p><p><strong>Conclusion: </strong>This study reveals the adaptability and thriving potential of Conocarpus erectus across varied habitats, providing key insights into its resilience and survival
背景:钮扣红树(Conocarpus erectus L.)被认为是红树林群落中的边缘种。这个特殊的物种有能力在干旱或半干旱的地区茁壮成长,那里的营养物质有限。本研究为直立人Conocarpus erectus在不同栖息地的生态优势提供了证据,突出了其在巴基斯坦全国的适应性和成功。研究人员从人工林、农田、路边和荒地4个不同的生态区域收集了12个种群,对直立人在不同环境背景下的适应性进行了综合评估。结果:人工林种群表现出良好的枝长势和中等的根长,植株普遍高而重。生理上,它们的叶绿素含量适中,类胡萝卜素水平较低,叶绿素a/b比平衡,表明它们的光合活性稳定。解剖上,这些种群具有较厚的表皮和皮层根层,但维管束和韧皮部区域较小。茎叶结构一般大小适中,叶中脉和皮层较厚。田间种群表现出旺盛的茎、根系统,鲜、干生物量平衡。它们显示出高叶绿素和类胡萝卜素水平,表明有很强的光合能力。根和茎解剖显示根面积较大,皮层较厚,维管束较宽,反映了结构发育的增强。这些种群的叶片中脉和皮层厚度适中,气孔面积较大,有利于有效的气体交换。路边种群根系更深,生物量产量减少。这些种群通过叶片扩张来适应环境胁迫,具有较高的叶数和面积。生理上,种群叶绿素含量高,叶绿素a/b比高。根和茎解剖结构紧凑,维管束较小,表明对恶劣环境的适应。叶片解剖中等,维管束较小,水分输送能力降低。荒地种群表现出生长差和高梢生物量,尽管叶片小。生理上,这些群体的总可溶性蛋白和脯氨酸含量最高,反映了胁迫适应性。在解剖学上,根和茎的结构是可变的,一些种群显示皮层细胞面积减少,维管束较小,表明资源运输有限。叶片结构层厚、表皮薄、气孔密度低,反映了对养分贫乏土壤的适应。结论:本研究揭示了直立人Conocarpus erectus在不同栖息地的适应性和生长潜力,为其恢复力和生存策略提供了重要见解。了解这些适应特征有助于在不同环境条件下,特别是在应对气候变化和栖息地退化的情况下,支持栖息地恢复、保护规划和改善物种管理。
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引用次数: 0
Population genomics of a thermophilic cyanobacterium revealed divergence at subspecies level and possible adaptation genes. 嗜热蓝藻的群体基因组学揭示了亚种水平的分化和可能的适应基因。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-11-28 DOI: 10.1186/s40529-024-00442-y
Hsin-Ying Chang, Hsi-Ching Yen, Hsiu-An Chu, Chih-Horng Kuo

Background: Cyanobacteria are diverse phototrophic microbes with ecological importance and potential for biotechnology applications. One species of thermophilic cyanobacteria, Thermosynechococcus taiwanensis, has been studied for biomass pyrolysis, estrogen degradation, and the production of bioethanol, monosaccharide, and phycocyanin. To better understand the diversity and evolution of this species, we sampled across different regions in Taiwan for strain isolation and genomic analysis.

Results: A total of 27 novel strains were isolated from nine of the 12 hot springs sampled and subjected to whole genome sequencing. Including strains studied previously, our genomic analyses encompassed 32 strains from 11 hot springs. Genome sizes among these strains ranged from 2.64 to 2.70 Mb, with an average of 2.66 Mb. Annotation revealed between 2465 and 2576 protein-coding genes per genome, averaging 2537 genes. Core-genome phylogeny, gene flow estimates, and overall gene content divergence consistently supported the within-species divergence into two major populations. While isolation by distance partially explained the within-population divergence, the factors driving divergence between populations remain unclear. Nevertheless, this species likely has a closed pan-genome comprising approximately 3030 genes, with our sampling providing sufficient coverage of its genomic diversity. To investigate the divergence and potential adaptations, we identified genomic regions with significantly lower nucleotide diversity, indicating loci that may have undergone selective sweeps within each population. We identified 149 and 289 genes within these regions in populations A and B, respectively. Only 16 genes were common to both populations, suggesting that selective sweeps primarily targeted different genes in the two populations. Key genes related to functions such as photosynthesis, motility, and ion transport were highlighted.

Conclusions: This work provides a population genomics perspective on a hot spring cyanobacterial species in Taiwan. Beyond advancing our understanding of microbial genomics and evolution, the strains collected and genome sequences generated in this work provide valuable materials for future development and utilization of biological resources.

背景:蓝藻是多种多样的光养微生物,具有重要的生态意义和生物技术应用潜力。其中一种嗜热蓝藻--台湾嗜热蓝藻(Thermosynechococcus taiwanensis)已被研究用于生物质热解、雌激素降解以及生物乙醇、单糖和藻蓝蛋白的生产。为了更好地了解该物种的多样性和进化,我们在台湾不同地区采样,进行菌株分离和基因组分析:结果:我们从 12 个温泉样本中的 9 个中分离出了 27 株新菌株,并对其进行了全基因组测序。包括之前研究过的菌株在内,我们的基因组分析涵盖了来自 11 个温泉的 32 株菌株。这些菌株的基因组大小从 2.64 到 2.70 Mb 不等,平均为 2.66 Mb。注释显示每个基因组有 2465 到 2576 个蛋白质编码基因,平均为 2537 个。核心基因组系统发育、基因流估计和总体基因含量差异一致支持种内分化为两个主要种群。虽然距离隔离可以部分解释种群内的分化,但种群间分化的驱动因素仍不清楚。不过,该物种可能拥有一个封闭的泛基因组,由大约 3030 个基因组成,我们的取样足以覆盖其基因组多样性。为了研究其分化和潜在的适应性,我们确定了核苷酸多样性明显较低的基因组区域,这表明在每个种群中可能经历了选择性扫荡的基因位点。我们分别在 A 种群和 B 种群的这些区域内发现了 149 和 289 个基因。只有 16 个基因是两个种群所共有的,这表明选择性扫描主要针对两个种群中的不同基因。与光合作用、运动和离子转运等功能相关的关键基因得到了强调:这项研究从种群基因组学的角度对台湾的一种温泉蓝藻物种进行了研究。除了增进我们对微生物基因组学和进化的了解外,这项工作中收集的菌株和生成的基因组序列还为未来生物资源的开发和利用提供了宝贵的材料。
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引用次数: 0
The levels of pattern-triggered immunity in the root and stembase of tomato cultivars positively correlate with the resistance to Ralstonia solanacearum. 番茄栽培品种根部和茎基部的模式触发免疫水平与对茄雷氏菌(Ralstonia solanacearum)的抗性呈正相关。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-11-26 DOI: 10.1186/s40529-024-00441-z
Chiao-Yu Ku, Li-Ren Guo, Feng-Chi Cheng, Chun-You Kuo, Andre Fortunatus Karim, Muhammad Yusril Hardiansyah, Yu-Chuan Chang, Yi-Fan Chen, Ya-Yi Chung, Chiu-Ping Cheng

Background: Bacterial wilt (BW), caused by Ralstonia solanacearum (Rs), is one of the most destructive diseases impacting a wide range of crops globally. The infection process is complex involving intricate interactions between the plant and Rs. Managing BW is challenging, and crop breeding remains the most effective strategy for disease control. Resistance to BW in crops is primarily associated with quantitative trait loci (QTLs), which are believed to correlate with the simultaneous activation of multiple defense mechanisms against pathogens. This study aimed to clarify the nature of BW resistance and determine whether pattern-triggered immunity (PTI) plays a role in this resistance.

Results: PTI can be triggered in tomato roots and stembases by an Rs hrpG- mutant and by the cell wall extract (PiCWE) from the root-infected beneficial fungus Piriformospora indica (Pi). Among tomato plants with varying resistance levels to Rs, BW-resistant (BWR) and moderate-resistant (BWMR) cultivars exhibited higher levels of root and stembase PTI in response to Rs hrpG- inoculation and PiCWE treatment than in BW-susceptible (BWS) cultivars. Additionally, BWR and BWMR cultivars showed enhanced leaf PTI after inoculation with a Pseudomonas syringae pv. tomato (Pst) hrcC- mutant. The BWR cultivar Hawaii 7996 (H7996) also demonstrated high tolerance to several leaf pathogens.

Conclusions: Efficient systems for the analyses of PTI responses in tomato roots, stembases and leaves in response to patterns derived from root-infected pathogenic and beneficial microorganisms have been established. The levels of PTI in roots, stembases, and leaves are positively correlated with BW resistance in tomato plants. The BWR cultivar H7996 also shows tolerance to various leaf pathogens. This study reveals a significant correlation between tomato PTI and resistance to Rs, provides valuable insights into the nature of BW resistance, and offers critical information for tomato breeding.

背景:由 Ralstonia solanacearum(Rs)引起的细菌性枯萎病(BW)是影响全球多种作物的最具破坏性的病害之一。感染过程非常复杂,涉及植物与 Rs 之间错综复杂的相互作用。管理 BW 具有挑战性,作物育种仍是控制病害的最有效策略。农作物对 BW 的抗性主要与数量性状基因座(QTLs)有关,据信 QTLs 与同时激活多种病原体防御机制有关。本研究旨在阐明BW抗性的本质,并确定模式触发免疫(PTI)是否在这种抗性中发挥作用:结果:Rs hrpG-突变体和根部感染的有益真菌 Piriformospora indica(Pi)的细胞壁提取物(PiCWE)可触发番茄根部和茎部的 PTI。在对 Rs 具有不同抗性水平的番茄植株中,抗 BW(BWR)和中度抗性(BWMR)栽培品种对 Rs hrpG- 接种和 PiCWE 处理的根和茎酶 PTI 水平高于对 BW 易感(BWS)栽培品种。此外,BWR 和 BWMR 栽培品种在接种 Pseudomonas syringae pv. tomato (Pst) hrcC- 突变体后,叶片 PTI 增强。BWR 栽培品种夏威夷 7996(H7996)也表现出对多种叶片病原体的高度耐受性:已经建立了高效的系统,用于分析番茄根、茎和叶中的 PTI 对根部感染的病原微生物和有益微生物所产生的模式的反应。根部、茎基部和叶片中的 PTI 水平与番茄植株的 BW 抗性呈正相关。BWR 栽培品种 H7996 也表现出对各种叶片病原体的耐受性。这项研究揭示了番茄 PTI 与 Rs 抗性之间的显著相关性,为了解 BW 抗性的本质提供了宝贵的见解,并为番茄育种提供了关键信息。
{"title":"The levels of pattern-triggered immunity in the root and stembase of tomato cultivars positively correlate with the resistance to Ralstonia solanacearum.","authors":"Chiao-Yu Ku, Li-Ren Guo, Feng-Chi Cheng, Chun-You Kuo, Andre Fortunatus Karim, Muhammad Yusril Hardiansyah, Yu-Chuan Chang, Yi-Fan Chen, Ya-Yi Chung, Chiu-Ping Cheng","doi":"10.1186/s40529-024-00441-z","DOIUrl":"10.1186/s40529-024-00441-z","url":null,"abstract":"<p><strong>Background: </strong>Bacterial wilt (BW), caused by Ralstonia solanacearum (Rs), is one of the most destructive diseases impacting a wide range of crops globally. The infection process is complex involving intricate interactions between the plant and Rs. Managing BW is challenging, and crop breeding remains the most effective strategy for disease control. Resistance to BW in crops is primarily associated with quantitative trait loci (QTLs), which are believed to correlate with the simultaneous activation of multiple defense mechanisms against pathogens. This study aimed to clarify the nature of BW resistance and determine whether pattern-triggered immunity (PTI) plays a role in this resistance.</p><p><strong>Results: </strong>PTI can be triggered in tomato roots and stembases by an Rs hrpG<sup>-</sup> mutant and by the cell wall extract (PiCWE) from the root-infected beneficial fungus Piriformospora indica (Pi). Among tomato plants with varying resistance levels to Rs, BW-resistant (BW<sup>R</sup>) and moderate-resistant (BW<sup>MR</sup>) cultivars exhibited higher levels of root and stembase PTI in response to Rs hrpG<sup>-</sup> inoculation and PiCWE treatment than in BW-susceptible (BW<sup>S</sup>) cultivars. Additionally, BW<sup>R</sup> and BW<sup>MR</sup> cultivars showed enhanced leaf PTI after inoculation with a Pseudomonas syringae pv. tomato (Pst) hrcC<sup>-</sup> mutant. The BW<sup>R</sup> cultivar Hawaii 7996 (H7996) also demonstrated high tolerance to several leaf pathogens.</p><p><strong>Conclusions: </strong>Efficient systems for the analyses of PTI responses in tomato roots, stembases and leaves in response to patterns derived from root-infected pathogenic and beneficial microorganisms have been established. The levels of PTI in roots, stembases, and leaves are positively correlated with BW resistance in tomato plants. The BW<sup>R</sup> cultivar H7996 also shows tolerance to various leaf pathogens. This study reveals a significant correlation between tomato PTI and resistance to Rs, provides valuable insights into the nature of BW resistance, and offers critical information for tomato breeding.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":"65 1","pages":"34"},"PeriodicalIF":3.4,"publicationDate":"2024-11-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11599649/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142715418","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Proximal aperture in Cephalanthera longifolia (L.) Fritsch (Orchidaceae) pollen: a rare germination site for angiosperms. Cephalanthera longifolia (L.) Fritsch(兰科)花粉的近端孔道:被子植物罕见的发芽部位。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-11-14 DOI: 10.1186/s40529-024-00439-7
Carola Purgina, Friðgeir Grímsson, Silvia Ulrich

The pollen dispersal unit of the epidendroid species, Cephalanthera longifolia, is a soft pollinium consisting of loosely connected tetrads that are agglutinated by elastoviscin. With scanning electron microscopy, the reticulate exine is visible on the outer pollen grains of outer tetrads of a pollinium. The pollen grains are mostly arranged in planar-tetragonal tetrads or decussate tetrads and easily disintegrate into monads. Contrary to the inaperturate pollen in members of subfamily Epidendroideae known so far, C. longifolia exhibits ulcerate pollen. When pollen grains are attached in tetrads within a pollinium the apertures are obscured, as they are located on the proximal side of the pollen grains. The ulcus can only be observed when tetrads disintegrate, freeing the monads and exposing the proximal side of pollen grains for investigation by light and scanning electron microscopy. Proximal aperture configurations are rare among angiosperms and currently known only from few other species of flowering plants. This is the first report of an ulcerate proximal aperture within Orchidaceae.

长叶头状花序(Cephalanthera longifolia)的花粉传播单元是由松散连接的四分体组成的软花粉块,这些四分体由弹性粘蛋白凝集而成。用扫描电子显微镜观察,花粉块外围四分体的外花粉粒上可见网状外皮。花粉粒大多排列成平面四边形或交互四边形,很容易分解成单粒。与目前已知的表皮亚科(Epidendroideae)成员的无溃疡花粉不同,长叶木犀(C. longifolia)的花粉呈溃疡状。当花粉粒以四分体形式附着在花粉囊内时,花粉孔被遮住,因为它们位于花粉粒的近端。只有当四分体解体,释放出单体并暴露出花粉粒的近端时,才能通过光镜和扫描电子显微镜观察到溃孔。近端孔构造在被子植物中非常罕见,目前仅从少数其他开花植物中得知。这是首次报道兰科植物的溃疡近端孔。
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引用次数: 0
Plant-derived saponins and their prospective for cosmetic and personal care products. 植物皂甙及其在化妆品和个人护理产品中的应用前景。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-11-08 DOI: 10.1186/s40529-024-00438-8
Mayuree Kanlayavattanakul, Donia Mersni, Nattaya Lourith

Plants are industrially cultivated and processed serving for specified sectors for human consumptions including cosmetic and personal care products. Where, the consumers' awareness towards sustainability are increasing year by year. Among which, those of the materials derived from the plants produced with good agricultural and manufacturing practices abided with bio-circular-green economy theme, are of eminence. This perspective is in line with the researchers' bioprospective onto natural products. Special attention sheds on saponins, the biosurfactants that will not cause detrimental effects on the environment. Which, plants are regarded as the sustainable sources of these cosmetic substances. However, among tremendous plants that have been continuously explored upon their potential applications. Most of the studies focus on preparation of the saponins and biological activities. Surprisingly, those that are abided with the list published in the European Commission (CosIng) that are of crucially for cosmetic regulation are insufficiently demonstrated, which burden their applications in the sector. This context summarizes the industrial crops that are registered as plant saponin in the CosIng database. Those that are insufficiently exploited on the information required for cosmetic formulations are therefore encouraged to be examined. In addition, multidirectional cosmetic beneficials of the filled plants saponin would be encouraged to be explored. These plants will be properly knowledge managed for their sustainable utilizations as the bio-based materials promising for cosmetic and personal care industrial perspectives.

植物的工业化栽培和加工服务于人类消费的特定领域,包括化妆品和个人护理产品。消费者的可持续发展意识逐年提高。其中,以生物循环绿色经济为主题,采用良好的农业和生产方式生产的植物材料尤为突出。这一观点与研究人员对天然产品的生物展望不谋而合。皂素是一种不会对环境造成有害影响的生物表面活性剂,受到特别关注。其中,植物被认为是这些化妆品物质的可持续来源。然而,在众多植物中,人们一直在探索它们的潜在用途。大多数研究都集中在皂苷的制备和生物活性方面。令人惊讶的是,那些符合欧盟委员会(CosIng)公布的清单、对化妆品监管至关重要的植物却没有得到充分证明,这给它们在该领域的应用造成了负担。本文概述了在 CosIng 数据库中登记为植物皂苷的工业作物。因此,我们鼓励对化妆品配方所需信息利用不足的作物进行研究。此外,还将鼓励探索填充植物皂苷的多方向化妆品益处。将对这些植物进行适当的知识管理,使其可持续利用,成为有望用于化妆品和个人护理行业的生物基材料。
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引用次数: 0
Identification of powdery mildew resistance quantitative trait loci in melon and development of resistant near-isogenic lines through marker-assisted backcrossing. 鉴定甜瓜白粉病抗性数量性状位点,并通过标记辅助回交培育抗性近等基因系。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-11-04 DOI: 10.1186/s40529-024-00435-x
Chun-San Wang, Ssu-Yu Lin, Jin-Hsing Huang, Hsin-Yi Chang, Di-Kuan Lew, Yu-Hua Wang, Kae-Kang Hwu, Yung-Fen Huang

Background: Melon (Cucumis melo L.), an important cucurbit crop, faces production limitations due to powdery mildew (PM). Developing resistant varieties offers a sustainable, genetics-based alternative to chemical treatments. Therefore, identifying PM resistance quantitative trait loci (QTL) and creating trait-associated markers are essential for efficient melon PM resistance improvement through marker-assisted backcrossing (MABC).

Results: Three F2 populations, A6, B2, and C4, were generated for QTL mapping of PM resistance. Major QTL were identified on chromosome 2 in A6, chromosome 5 in B2, and chromosomes 5 and 12 in C4. A series of TaqMan® assays targeting regions on chromosomes 2, 5, and 12 were developed and validated for foreground and recombinant selection, complemented by the double digest restriction-site associated DNA genotyping system to evaluate the recurrent parent genome recovery. Three MABC programs using resistant donor parents from A6 and C4 crossed with elite susceptible recurrent parents with green and orange fruit flesh were implemented. After two to three cycles of MABC, individual QTL was successfully introgressed into elite genetic backgrounds, giving six PM resistance lines in each green- and orange-fleshed background. PM inoculation on the twelve near-isogenic lines confirmed their resistance to PM.

Conclusions: We have identified major PM resistance QTL for melon on chromosomes 2, 5, and 12 and have introgressed individual QTL to elite genetic backgrounds using MABC in three and a half years. This study demonstrates the power of combining high-throughput genotyping with breeding efforts and showcases the efficiency of molecular breeding.

背景:甜瓜(Cucumis melo L.)是一种重要的葫芦科作物,由于白粉病(PM),其产量受到限制。开发抗病品种提供了一种可持续的、基于遗传学的化学处理替代方法。因此,通过标记辅助回交(MABC)鉴定瓜类抗白粉病数量性状位点(QTL)和创建性状相关标记对于高效改良瓜类抗白粉病性状至关重要:结果:产生了三个 F2 群体 A6、B2 和 C4,用于绘制 PM 抗性 QTL 图谱。在 A6 的 2 号染色体、B2 的 5 号染色体以及 C4 的 5 号和 12 号染色体上发现了主要 QTL。针对 2 号、5 号和 12 号染色体上的区域开发并验证了一系列 TaqMan® 检测方法,用于前景选择和重组选择,并辅以双消化限制性位点相关 DNA 基因分型系统来评估重复亲本基因组恢复情况。利用来自 A6 和 C4 的抗性供体亲本与具有绿色和橙色果肉的精英易感重复亲本杂交,实施了三个 MABC 计划。经过两到三个周期的 MABC 后,单个 QTL 成功导入到精英遗传背景中,从而在绿色和橙色果肉背景中分别产生了六个 PM 抗性品系。对这十二个近交系的 PM 接种证实了它们对 PM 的抗性:我们在 2 号、5 号和 12 号染色体上发现了甜瓜主要的 PM 抗性 QTL,并利用 MABC 在三年半的时间内将单个 QTL 引种到精英遗传背景中。这项研究证明了高通量基因分型与育种工作相结合的威力,并展示了分子育种的效率。
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引用次数: 0
An efficient and easy-to-use protocol for induction of haploids in cucumber through parthenogenic embryo development. 通过孤雌胚发育诱导黄瓜单倍体的高效易用方案。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-10-08 DOI: 10.1186/s40529-024-00436-w
Pradeepkumara N, Chander Parkash, Reeta Bhatia, Anilabha Das Munshi, Mahesh Rao, Subhashree Subhasmita, Tusar Kanti Behera, Shyam Sundar Dey

Background: Cucumber (Cucumis sativus L.) is a model crop to study cell biology, including the development of haploids and doubled haploids in vegetable crops. In plant breeding, haploid and doubled haploids are valuable tools for developing pure homozygous inbred lines and accelerating genetic progress by reducing the time required for breeding cycles. Besides, the haploids are also valuable in genomic studies. We are reporting the induction of haploids in cucumber involving gynoecious and parthenocarpic genotypes for the first time. This study aimed to assess the efficient induction of haploids through pollination with gamma-irradiated pollen in cucumber. The effect of gamma irradiation dose on pollen viability and germination, fruit setting percentage, seed development, and haploid embryo development in cucumber hybrid genotypes were studied in detail. The goal was to utilize this information to produce haploid plants for genomics and transformation works in this model vegetable crop.

Results: Pollination was done on six cucumber genotypes using varying doses of gamma rays (100, 200, 300, 400, and 500 Gy). Genotypes, doses of irradiation, and embryo developmental stage influenced the successful generation of in-vitro haploid plants. The optimal timeframe for embryo rescue was found to be 25 to 30 days after pollination. Haploid embryos were effectively induced using irradiated pollen at 400 to 500 Gy doses. Parthenogenetic plantlets were analyzed, and their ploidy level was confirmed through stomatal physiology, cytology (mitosis), and flow cytometry methods.

Conclusion: Through parthenogenic embryo development, it is possible to induce a large number of haploids in cucumber. This technique's power lies in its ability to streamline the breeding process, enhance genetic gain, and produce superior cultivars that contribute to sustainable agriculture and food security.

背景:黄瓜(Cucumis sativus L.)是研究细胞生物学的模式作物,包括蔬菜作物单倍体和双倍单倍体的发展。在植物育种中,单倍体和双倍单倍体是培育纯合近交系的重要工具,可缩短育种周期所需的时间,加快遗传进展。此外,单倍体在基因组研究中也很有价值。我们首次报道了雌雄同株和孤雌生殖基因型黄瓜单倍体的诱导。本研究旨在评估通过伽马射线照射花粉授粉诱导黄瓜单倍体的效率。详细研究了伽马辐照剂量对黄瓜杂交基因型的花粉活力和萌发、坐果率、种子发育和单倍体胚胎发育的影响。目的是利用这些信息培育单倍体植株,用于这种模式蔬菜作物的基因组学和转化工作:使用不同剂量的伽马射线(100、200、300、400 和 500 Gy)对六种黄瓜基因型进行了授粉。基因型、辐照剂量和胚胎发育阶段都会影响体外单倍体植株的成功生成。胚胎挽救的最佳时间范围是授粉后 25 至 30 天。使用 400 至 500 Gy 剂量的辐照花粉可有效诱导单倍体胚。通过气孔生理学、细胞学(有丝分裂)和流式细胞仪方法,对孤雌生殖的小植株进行了分析,并确认了其倍性水平:结论:通过孤雌生殖胚胎发育,可以在黄瓜中诱导出大量单倍体。这项技术的优势在于能够简化育种过程,提高遗传增益,并培育出有助于可持续农业和粮食安全的优良品种。
{"title":"An efficient and easy-to-use protocol for induction of haploids in cucumber through parthenogenic embryo development.","authors":"Pradeepkumara N, Chander Parkash, Reeta Bhatia, Anilabha Das Munshi, Mahesh Rao, Subhashree Subhasmita, Tusar Kanti Behera, Shyam Sundar Dey","doi":"10.1186/s40529-024-00436-w","DOIUrl":"10.1186/s40529-024-00436-w","url":null,"abstract":"<p><strong>Background: </strong>Cucumber (Cucumis sativus L.) is a model crop to study cell biology, including the development of haploids and doubled haploids in vegetable crops. In plant breeding, haploid and doubled haploids are valuable tools for developing pure homozygous inbred lines and accelerating genetic progress by reducing the time required for breeding cycles. Besides, the haploids are also valuable in genomic studies. We are reporting the induction of haploids in cucumber involving gynoecious and parthenocarpic genotypes for the first time. This study aimed to assess the efficient induction of haploids through pollination with gamma-irradiated pollen in cucumber. The effect of gamma irradiation dose on pollen viability and germination, fruit setting percentage, seed development, and haploid embryo development in cucumber hybrid genotypes were studied in detail. The goal was to utilize this information to produce haploid plants for genomics and transformation works in this model vegetable crop.</p><p><strong>Results: </strong>Pollination was done on six cucumber genotypes using varying doses of gamma rays (100, 200, 300, 400, and 500 Gy). Genotypes, doses of irradiation, and embryo developmental stage influenced the successful generation of in-vitro haploid plants. The optimal timeframe for embryo rescue was found to be 25 to 30 days after pollination. Haploid embryos were effectively induced using irradiated pollen at 400 to 500 Gy doses. Parthenogenetic plantlets were analyzed, and their ploidy level was confirmed through stomatal physiology, cytology (mitosis), and flow cytometry methods.</p><p><strong>Conclusion: </strong>Through parthenogenic embryo development, it is possible to induce a large number of haploids in cucumber. This technique's power lies in its ability to streamline the breeding process, enhance genetic gain, and produce superior cultivars that contribute to sustainable agriculture and food security.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":"65 1","pages":"30"},"PeriodicalIF":3.4,"publicationDate":"2024-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11461365/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142388043","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pollinator behaviour and prevalence of the anther smut Antherospora vindobonensis in its host, the Hungarian two-leaf squill (Scilla vindobonensis). 传粉昆虫的行为及其寄主匈牙利二叶地瓜(Scilla vindobonensis)中花药褐斑病 Antherospora vindobonensis 的流行情况。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-09-29 DOI: 10.1186/s40529-024-00437-9
Pavol Prokop, Kristián Tučník, Zuzana Provazník, Zuzana Čiamporová-Zaťovičová, Fedor Čiampor

Anther smuts are fungal diseases that have detrimental effects on the biology of their host plants. We investigated the transmission of Anther smut Antherospora vindobonensis to its host, Scilla vindobonensis under natural and laboratory conditions. Plants flowering early in spring were less vulnerable to disease (∼ 20-30% of plants which appeared early in the season were diseased) than flowers that bloom at the end of the season (∼ 60% of plants which appeared late in the season were diseased) which contradicts the patterns observed for other anther smuts species. Diseased plants showed thicker stems, lower nectar production and smaller flower radius than healthy plants. The disease prevalence in S. vindobonensis was not influenced by plant density. The production of spores in diseased flowers was 125 times higher than the production of pollen in healthy flowers. The number of pollen grains attached to pollinator bodies from healthy plants under controlled conditions was similar to the number of spores attached from diseased plants. Experienced honeybees in the field showed almost identical preferences for healthy plants (65%) over diseased ones, as did naïve bumblebees under controlled laboratory conditions (69%). eDNA metabarcoding revealed that healthy flowers attracted a significantly higher number of arthropod species (M = 6.23, SE = 1.48) than diseased flowers (M = 2.32, SE = 0.31). Strong seasonal differences in the risk of infection suggest that S. vindobonensis solves the trade-off between low pollinator availability and low risk of infection at the beginning of the season and high risk of infection and high pollinator availability at the end of season. By reproducing early in the season, plants can reduce the risk of disease.

花药疫霉病是一种真菌病害,会对寄主植物的生物学特性产生不利影响。我们研究了花药疫霉菌 Antherospora vindobonensis 在自然和实验室条件下向寄主 Scilla vindobonensis 传播的情况。早春开花的植株(20%-30%的早花植株染病)比晚春开花的植株(60%-60%的晚花植株染病)更不容易染病,这与在其他花药烟粉虱物种中观察到的模式相矛盾。与健康植株相比,患病植株的茎更粗,花蜜产量更低,花朵半径更小。S. vindobonensis 的发病率不受植株密度的影响。病花的孢子产量比健康花的花粉产量高 125 倍。在受控条件下,健康植株授粉体上附着的花粉粒数量与病株上附着的孢子数量相似。eDNA 代谢编码显示,健康花朵吸引的节肢动物物种数量(M = 6.23,SE = 1.48)明显高于病害花朵(M = 2.32,SE = 0.31)。感染风险的强烈季节性差异表明,文多波尼囊矢车菊解决了季节初期传粉昆虫数量少、感染风险低,而季节末期传粉昆虫数量多、感染风险高的权衡问题。通过在季节早期繁殖,植物可以降低疾病风险。
{"title":"Pollinator behaviour and prevalence of the anther smut Antherospora vindobonensis in its host, the Hungarian two-leaf squill (Scilla vindobonensis).","authors":"Pavol Prokop, Kristián Tučník, Zuzana Provazník, Zuzana Čiamporová-Zaťovičová, Fedor Čiampor","doi":"10.1186/s40529-024-00437-9","DOIUrl":"10.1186/s40529-024-00437-9","url":null,"abstract":"<p><p>Anther smuts are fungal diseases that have detrimental effects on the biology of their host plants. We investigated the transmission of Anther smut Antherospora vindobonensis to its host, Scilla vindobonensis under natural and laboratory conditions. Plants flowering early in spring were less vulnerable to disease (∼ 20-30% of plants which appeared early in the season were diseased) than flowers that bloom at the end of the season (∼ 60% of plants which appeared late in the season were diseased) which contradicts the patterns observed for other anther smuts species. Diseased plants showed thicker stems, lower nectar production and smaller flower radius than healthy plants. The disease prevalence in S. vindobonensis was not influenced by plant density. The production of spores in diseased flowers was 125 times higher than the production of pollen in healthy flowers. The number of pollen grains attached to pollinator bodies from healthy plants under controlled conditions was similar to the number of spores attached from diseased plants. Experienced honeybees in the field showed almost identical preferences for healthy plants (65%) over diseased ones, as did naïve bumblebees under controlled laboratory conditions (69%). eDNA metabarcoding revealed that healthy flowers attracted a significantly higher number of arthropod species (M = 6.23, SE = 1.48) than diseased flowers (M = 2.32, SE = 0.31). Strong seasonal differences in the risk of infection suggest that S. vindobonensis solves the trade-off between low pollinator availability and low risk of infection at the beginning of the season and high risk of infection and high pollinator availability at the end of season. By reproducing early in the season, plants can reduce the risk of disease.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":"65 1","pages":"29"},"PeriodicalIF":3.4,"publicationDate":"2024-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11439859/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142341810","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Recent biotechnological applications of value-added bioactive compounds from microalgae and seaweeds. 从微藻和海藻中提取增值生物活性化合物的最新生物技术应用。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-09-23 DOI: 10.1186/s40529-024-00434-y
Salma N Eladl, Aya M Elnabawy, Eladl G Eltanahy

Microalgae and seaweed have been consumed as food for several decades to combat starvation and food shortages worldwide. The most famous edible microalgae species are Nostoc, Spirulina, and Aphanizomenon, in addition to seaweeds, which are used in traditional medicine and food, such as Nori, which is one of the most popular foods containing Pyropia alga as a major ingredient. Recently, many applications use algae-derived polysaccharides such as agar, alginate, carrageenan, cellulose, fucoidan, mannan, laminarin, ulvan, and xylan as gelling agents in food, pharmaceuticals, and cosmetics industries. Moreover, pigments (carotenoids particularly astaxanthins, chlorophylls, and phycobilins), minerals, vitamins, polyunsaturated fatty acids, peptides, proteins, polyphenols, and diterpenes compounds are accumulated under specific cultivation and stress conditions in the algal cells to be harvested and their biomass used as a feedstock for the relevant industries and applications. No less critical is the use of algae in bioremediation, thus contributing significantly to environmental sustainability.This review will explore and discuss the various applications of microalgae and seaweeds, emphasising their role in bioremediation, recent products with algal added-value compounds that are now on the market, and novel under-developing applications such as bioplastics and nanoparticle production. Nonetheless, special attention is also drawn towards the limitations of these applications and the technologies applied, and how they may be overcome.

几十年来,人们一直将微藻和海藻作为食物食用,以应对全球饥饿和粮食短缺问题。最有名的可食用微藻品种是 Nostoc、Spirulina 和 Aphanizomenon,此外还有用于传统医药和食品的海藻,如紫菜,它是以 Pyropia 藻为主要成分的最受欢迎的食品之一。最近,琼脂、海藻酸、卡拉胶、纤维素、褐藻糖胶、甘露聚糖、层粘聚糖、乌尔凡聚糖和木聚糖等海藻衍生多糖被广泛应用于食品、药品和化妆品行业的胶凝剂。此外,在特定的栽培和胁迫条件下,藻细胞中还会积累色素(类胡萝卜素,特别是虾青素、叶绿素和藻蓝素)、矿物质、维生素、多不饱和脂肪酸、肽、蛋白质、多酚和二萜化合物,这些藻细胞将被收获,其生物质将被用作相关行业和应用的原料。本综述将探讨和讨论微藻和海藻的各种应用,重点是它们在生物修复中的作用、近期上市的含有藻类高附加值化合物的产品,以及正在开发中的新应用,如生物塑料和纳米粒子生产。不过,还特别关注这些应用和应用技术的局限性,以及如何克服这些局限性。
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引用次数: 0
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