首页 > 最新文献

Botanical Studies最新文献

英文 中文
Taxonomic resurrection of Saxifraga lancangensis (Saxifragaceae) 澜沧龙须菜(龙须菜科)的分类复活
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-04-29 DOI: 10.1186/s40529-024-00418-y
Xin-Jian Zhang, Kang-Zheng Jiang, Xin-Yuan Kuai, Jun-Tong Chen, Peng-Rui Luo, Hang Sun, Tao Deng
Accurate species delimitation is fundamental for testing evolutionary theory and provides essential implications for conservation management. The arctic-alpine genus Saxifraga L. (Saxifragaceae) is taxonomically complex and many species have not been critically assessed. The taxonomic and phylogenetic status of Saxifraga lancangensis Y.Y.Qian, considered as a synonym of Saxifraga mengtzeana Engl. & Irmsch. in previous studies, is re-evaluated in light of new evidence presented here. Evidence from morphological comparison and sequencing of plastid genome indicate that S. lancangensis belongs to Saxifraga sect. Irregulares Haw., and is closely related to Saxifraga geifolia Balf.f., and S. mengtzeana. However, S. lancangensis can be diagnosed by its petals with red and clawless base, leaf blade orbicular and leaf margin shallowly dentate. The morphological and molecular evidence support the resurrection of S. lancangensis as a distinct species. An updated morphological description based on protologue and fresh material, diagnostic characters, and original photographs of the resurrected species are presented.
准确的物种划分是检验进化理论的基础,对保护管理具有重要意义。北极高山植物属 Saxifraga L.(Saxifragaceae)在分类学上十分复杂,许多物种尚未得到严格评估。Saxifraga lancangensis Y.Y.Qian 在以前的研究中被认为是 Saxifraga mengtzeana Engl.形态学比较和质粒基因组测序的证据表明,澜沧茜属于 Saxifraga sect.Irregulares Haw.,与 Saxifraga geifolia Balf.f. 和 S. mengtzeana 关系密切。然而,澜沧茜的特征是花瓣红色,基部无爪,叶片圆形,叶缘有浅齿。形态学和分子证据支持将 S. lancangensis 作为一个独立的种复活。本文介绍了基于原生种和新鲜材料的最新形态描述、诊断特征以及复活种的原始照片。
{"title":"Taxonomic resurrection of Saxifraga lancangensis (Saxifragaceae)","authors":"Xin-Jian Zhang, Kang-Zheng Jiang, Xin-Yuan Kuai, Jun-Tong Chen, Peng-Rui Luo, Hang Sun, Tao Deng","doi":"10.1186/s40529-024-00418-y","DOIUrl":"https://doi.org/10.1186/s40529-024-00418-y","url":null,"abstract":"Accurate species delimitation is fundamental for testing evolutionary theory and provides essential implications for conservation management. The arctic-alpine genus Saxifraga L. (Saxifragaceae) is taxonomically complex and many species have not been critically assessed. The taxonomic and phylogenetic status of Saxifraga lancangensis Y.Y.Qian, considered as a synonym of Saxifraga mengtzeana Engl. & Irmsch. in previous studies, is re-evaluated in light of new evidence presented here. Evidence from morphological comparison and sequencing of plastid genome indicate that S. lancangensis belongs to Saxifraga sect. Irregulares Haw., and is closely related to Saxifraga geifolia Balf.f., and S. mengtzeana. However, S. lancangensis can be diagnosed by its petals with red and clawless base, leaf blade orbicular and leaf margin shallowly dentate. The morphological and molecular evidence support the resurrection of S. lancangensis as a distinct species. An updated morphological description based on protologue and fresh material, diagnostic characters, and original photographs of the resurrected species are presented.","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-04-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140810523","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gas exchange and chlorophyll fluorescence responses of Camellia sinensis grown under various cultivations in different seasons. 不同栽培条件下不同季节生长的山茶花的气体交换和叶绿素荧光反应。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-22 DOI: 10.1186/s40529-024-00416-0
Chung-I Chen, Kuan-Hung Lin, Meng-Yuan Huang, Chih-Kai Yang, Yu-Hsiu Lin, Mei-Li Hsueh, Li-Hua Lee, Shiou-Ruei Lin, Ching-Wen Wang

Sod culture (SC) and conventional agriculture (CA) represent two distinct field management approaches utilized in the cultivation of tea plants in Taiwan. In this study, we employed gas exchange and chlorophyll fluorescence techniques to assess the impact of SC and CA methods on the photosynthetic machinery of Camellia sinensis cv. TTES No.12 (Jhinhsuan) in response to variable light intensities across different seasons. In spring, at photosynthetic photon flux densities (PPFD) ranging from 800 to 2,000 μmol photon m-2 s-1, the net photosynthesis rate (Pn, 10.43 μmol CO2 m-2 s-1), stomatal conductance (Gs, 126.11 mmol H2O m-2 s-1), electron transport rate (ETR, 137.94), and ΔF/Fm' and Fv/Fm (50.37) values for plants grown using SC were comparatively higher than those cultivated under CA. Conversely, the non-photochemical quenching (NPQ) values for SC-grown plants were relatively lower (3.11) compared to those grown under CA at 800 to 2,000 PPFD in spring. Additionally, when tea plants were exposed to PPFD levels below 1,500 μmol photon m- 2 s- 1, there was a concurrent increase in Pn, Gs, ETR, and NPQ. These photosynthetic parameters are crucial for devising models that optimize cultivation practices across varying seasons and specific tillage requirements, and for predicting photosynthetic and respiratory responses of tea plants to seasonally or artificially altered light irradiances. The observed positive impacts of SC on maximum photosynthetic rate (Amax), Fv/Fm, Gs, water-use efficiency (WUE), and ETR suggest that SC is advantageous for enhancing the productivity of tea plants, thereby offering a more adaptable management model for tea gardens.

草皮栽培(SC)和传统农业(CA)是台湾茶树栽培中两种不同的田间管理方法。本研究采用气体交换和叶绿素荧光技术,评估了草皮栽培和常规农业栽培在不同季节不同光照强度下对茶树光合作用机制的影响。春季,在光合光通量密度(PPFD)为 800 至 2,000 μmol photon m-2 s-1 的条件下,净光合速率(Pn,10.43 μmol CO2 m-2 s-1)、气孔导度(Gs,126.11 mmol H2O m-2 s-1)、电子传递速率(ETR,137.94)、ΔF/Fm'和 Fv/Fm (50.37) 值都比在 CA 条件下栽培的植株高。相反,在春季 800 至 2,000 PPFD 的条件下,与在 CA 条件下种植的茶树相比,在 SC 条件下种植的茶树的非光化学淬灭(NPQ)值相对较低(3.11)。此外,当茶树暴露于低于 1,500 μmol photon m- 2 s- 1 的 PPFD 水平时,Pn、Gs、ETR 和 NPQ 也同时增加。这些光合作用参数对于设计模型以优化不同季节和特定耕作要求下的栽培实践,以及预测茶树对季节性或人为改变的光辐照度的光合作用和呼吸反应至关重要。观察到的SC对最大光合速率(Amax)、Fv/Fm、Gs、水分利用效率(WUE)和ETR的积极影响表明,SC有利于提高茶树的生产力,从而为茶园提供了一种适应性更强的管理模式。
{"title":"Gas exchange and chlorophyll fluorescence responses of Camellia sinensis grown under various cultivations in different seasons.","authors":"Chung-I Chen, Kuan-Hung Lin, Meng-Yuan Huang, Chih-Kai Yang, Yu-Hsiu Lin, Mei-Li Hsueh, Li-Hua Lee, Shiou-Ruei Lin, Ching-Wen Wang","doi":"10.1186/s40529-024-00416-0","DOIUrl":"10.1186/s40529-024-00416-0","url":null,"abstract":"<p><p>Sod culture (SC) and conventional agriculture (CA) represent two distinct field management approaches utilized in the cultivation of tea plants in Taiwan. In this study, we employed gas exchange and chlorophyll fluorescence techniques to assess the impact of SC and CA methods on the photosynthetic machinery of Camellia sinensis cv. TTES No.12 (Jhinhsuan) in response to variable light intensities across different seasons. In spring, at photosynthetic photon flux densities (PPFD) ranging from 800 to 2,000 μmol photon m<sup>-2</sup> s<sup>-1</sup>, the net photosynthesis rate (Pn, 10.43 μmol CO<sub>2</sub> m<sup>-2</sup> s<sup>-1</sup>), stomatal conductance (Gs, 126.11 mmol H<sub>2</sub>O m<sup>-2</sup> s<sup>-1</sup>), electron transport rate (ETR, 137.94), and ΔF/Fm' and Fv/Fm (50.37) values for plants grown using SC were comparatively higher than those cultivated under CA. Conversely, the non-photochemical quenching (NPQ) values for SC-grown plants were relatively lower (3.11) compared to those grown under CA at 800 to 2,000 PPFD in spring. Additionally, when tea plants were exposed to PPFD levels below 1,500 μmol photon m<sup>- 2</sup> s<sup>- 1</sup>, there was a concurrent increase in Pn, Gs, ETR, and NPQ. These photosynthetic parameters are crucial for devising models that optimize cultivation practices across varying seasons and specific tillage requirements, and for predicting photosynthetic and respiratory responses of tea plants to seasonally or artificially altered light irradiances. The observed positive impacts of SC on maximum photosynthetic rate (Amax), Fv/Fm, Gs, water-use efficiency (WUE), and ETR suggest that SC is advantageous for enhancing the productivity of tea plants, thereby offering a more adaptable management model for tea gardens.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-03-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10957798/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140183788","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dynamic of land use and vegetation change in the eastern bank of Bénoué (North Cameroon). 贝努埃河东岸(喀麦隆北部)土地利用和植被变化的动态。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-13 DOI: 10.1186/s40529-024-00413-3
Djosebe Azaria, Froumsia Moksia, Tchobsala, Kamblaba Pierre, Prudence Tezore Bakary

The eastern part of the Benoue River bank is undergoing degradation marked by a significant decrease in vegetation cover and woody resources due to anthropogenic activities and climatic. The main objective of this study is to analyze the farmers' knowledge of vegetation evolution and the dynamics of land use using satellite images in the east of the bank of the Benoue. The methodological approach used is an integrated one combining field surveys, remote sensing, mapping, and modeling. The results obtained show that 88% of the population surveyed believe that the area covered by vegetation has decreased. The reasons for this decrease are numerous, but the main one remains the strong anthropic activity that would be at the origin of the progressive degradation of the land. The evolutionary trend of plant formations is essentially regressive for natural formations from 1991 to 2021. The analysis of the evolution of land use showed that in the Rey-Bouba district during 1991, 58.24% of the area formerly made up of dense woody formations regressed considerably to 25.77% in 2021. The same is true for the Bibemi district where the area of wooded zone has decreased from 65.47% in 1991 to 28.45% of the total area in 2021. This regression of the surface area of wooded formations was done to the benefit of anthropized occupation classes whose area has increased. They suggest an effective awareness in the monitoring of the dynamics of the vegetation cover subjected to anthropic pressures and climatic variations for a better-integrated management of the vegetation of this area.

由于人类活动和气候原因,贝努埃河岸东部地区的植被和林木资源正在退化。本研究的主要目的是利用卫星图像分析农民对贝努埃河岸东部植被演变和土地利用动态的认识。所采用的方法是一种结合实地调查、遥感、绘图和建模的综合方法。调查结果显示,88% 的受访者认为植被覆盖面积有所减少。造成植被减少的原因很多,但最主要的原因仍然是强烈的人类活动,这也是土地逐渐退化的根源。从 1991 年到 2021 年,自然形成的植物演变趋势基本上是倒退的。对土地利用演变的分析表明,在雷伊-布巴区,1991 年,58.24%的地区以前由茂密的林木构成,到 2021 年,这一比例大幅下降到 25.77%。比贝米区的情况也是如此,林区面积从 1991 年占总面积的 65.47%下降到 2021 年的 28.45%。林地面积的减少有利于人类居住区,因为人类居住区的面积增加了。他们建议,在监测植被受人类压力和气候变异影响的动态时,应提高有效意识,以便更好地综合管理该地区的植被。
{"title":"Dynamic of land use and vegetation change in the eastern bank of Bénoué (North Cameroon).","authors":"Djosebe Azaria, Froumsia Moksia, Tchobsala, Kamblaba Pierre, Prudence Tezore Bakary","doi":"10.1186/s40529-024-00413-3","DOIUrl":"10.1186/s40529-024-00413-3","url":null,"abstract":"<p><p>The eastern part of the Benoue River bank is undergoing degradation marked by a significant decrease in vegetation cover and woody resources due to anthropogenic activities and climatic. The main objective of this study is to analyze the farmers' knowledge of vegetation evolution and the dynamics of land use using satellite images in the east of the bank of the Benoue. The methodological approach used is an integrated one combining field surveys, remote sensing, mapping, and modeling. The results obtained show that 88% of the population surveyed believe that the area covered by vegetation has decreased. The reasons for this decrease are numerous, but the main one remains the strong anthropic activity that would be at the origin of the progressive degradation of the land. The evolutionary trend of plant formations is essentially regressive for natural formations from 1991 to 2021. The analysis of the evolution of land use showed that in the Rey-Bouba district during 1991, 58.24% of the area formerly made up of dense woody formations regressed considerably to 25.77% in 2021. The same is true for the Bibemi district where the area of wooded zone has decreased from 65.47% in 1991 to 28.45% of the total area in 2021. This regression of the surface area of wooded formations was done to the benefit of anthropized occupation classes whose area has increased. They suggest an effective awareness in the monitoring of the dynamics of the vegetation cover subjected to anthropic pressures and climatic variations for a better-integrated management of the vegetation of this area.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-03-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10937873/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140118795","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Hypoglycemic effects of dracorhodin and dragon blood crude extract from Daemonorops draco. 龙血素和龙血粗提取物的降血糖作用
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-06 DOI: 10.1186/s40529-024-00415-1
Yung-Hao Ching, Fang-Mei Lin, Hong-Chi Chen, Ching-Yun Hsu, Sze Yen P'ng, Tai-No Lin, Yu-Chia Wang, Cheng-Jun Lin, Yi-Chi Chen, Tsung-Jung Ho, Hao-Ping Chen

Background: Dragon blood is a red fruit resin from the palm tree Daemonorops draco and is a herbal ingredient used in the traditional Chinese medicine, "Jinchuang Ointment," which is used to treat non-healing diabetic wounds. According to the Taiwan Herbal Pharmacopeia, the dracorhodin content in dragon blood should exceed 1.0%.

Results: Our findings indicate that dracorhodin and dragon blood crude extracts can stimulate glucose uptake in mouse muscle cells (C2C12) and primary rat aortic smooth muscle cells (RSMC). Dracorhodin is not the only active compound in dragon blood crude extracts from D. draco. Next, we orally administered crude dragon blood extracts to male B6 mice. The experimental group displayed a decreasing trend in fasting blood glucose levels from the second to tenth week. In summary, crude extracts of dragon blood from D. draco demonstrated in vivo hypoglycemic effects in B6 male mice.

Conclusions: We provide a scientific basis "Jinchuang ointment" in treating non-healing wounds in patients with diabetes.

背景:龙血是棕榈科植物龙血树的红色果实树脂,是传统中药 "金创膏 "中的一种中药成分,用于治疗糖尿病伤口不愈合。根据台湾《中药药典》的规定,龙血素的含量应超过 1.0%:我们的研究结果表明,龙血素和龙血粗提物可刺激小鼠肌肉细胞(C2C12)和原代大鼠主动脉平滑肌细胞(RSMC)的葡萄糖摄取。龙血树甙并不是龙血树粗提取物中唯一的活性化合物。接下来,我们给雄性 B6 小鼠口服龙血粗提物。从第二周到第十周,实验组的空腹血糖水平呈下降趋势。综上所述,龙血树龙血粗提物对雄性 B6 小鼠具有体内降血糖作用:我们为 "金创膏 "治疗糖尿病患者伤口不愈合提供了科学依据。
{"title":"Hypoglycemic effects of dracorhodin and dragon blood crude extract from Daemonorops draco.","authors":"Yung-Hao Ching, Fang-Mei Lin, Hong-Chi Chen, Ching-Yun Hsu, Sze Yen P'ng, Tai-No Lin, Yu-Chia Wang, Cheng-Jun Lin, Yi-Chi Chen, Tsung-Jung Ho, Hao-Ping Chen","doi":"10.1186/s40529-024-00415-1","DOIUrl":"10.1186/s40529-024-00415-1","url":null,"abstract":"<p><strong>Background: </strong>Dragon blood is a red fruit resin from the palm tree Daemonorops draco and is a herbal ingredient used in the traditional Chinese medicine, \"Jinchuang Ointment,\" which is used to treat non-healing diabetic wounds. According to the Taiwan Herbal Pharmacopeia, the dracorhodin content in dragon blood should exceed 1.0%.</p><p><strong>Results: </strong>Our findings indicate that dracorhodin and dragon blood crude extracts can stimulate glucose uptake in mouse muscle cells (C2C12) and primary rat aortic smooth muscle cells (RSMC). Dracorhodin is not the only active compound in dragon blood crude extracts from D. draco. Next, we orally administered crude dragon blood extracts to male B6 mice. The experimental group displayed a decreasing trend in fasting blood glucose levels from the second to tenth week. In summary, crude extracts of dragon blood from D. draco demonstrated in vivo hypoglycemic effects in B6 male mice.</p><p><strong>Conclusions: </strong>We provide a scientific basis \"Jinchuang ointment\" in treating non-healing wounds in patients with diabetes.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10917723/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140038717","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An uncut copy of Scleromyceti Sueciae: lost and then found. 一本未删节的《Scleromyceti Sueciae》:失而复得。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-01 DOI: 10.1186/s40529-024-00414-2
Roy Watling

Background: A copy of Scleromyceti Sueciae, a work on which the nomenclature of many fungi is based was known to occur in Scotland's Glasgow University Botany Department but the buildings were devastated by fire in 2001 and the whereabouts of this important work, if it existed, was lost. Its re-finding is reported herein.

Results: The Glasgow copy of Scleromyceti Sueciae, an uncut first edition of Fries' work, was located in the Glasgow Museums in its original cabinet being transferred there years before the fire and its specimens being now databased. It is one of the few existing uncut copies of this important scientific work and one of the best-preserved copies of the first edition.

Conclusion: The discovery of this first edition of Scleromyceti Sueciae emphasizes the significance to reserve special conservation for important collections by early mycologists. It also allows interested mycologists world-wide to know of the existence in Glasgow of an uncut, first edition copy.

背景:据了解,苏格兰格拉斯哥大学植物学系曾藏有一本《Scleromyceti Sueciae》,该书是许多真菌命名法的基础,但 2001 年的一场大火烧毁了该系的建筑,这本重要著作也因此不知所踪。现将重新找到它的情况报告如下:结果:《Scleromyceti Sueciae》的格拉斯哥版本是弗里斯著作的未删节初版,位于格拉斯哥博物馆的原始柜子中,在火灾发生前几年被转移到那里,其标本现在已经建立了数据库。它是这本重要科学著作现存的为数不多的未裁切副本之一,也是保存最完好的第一版副本之一:结论:《Scleromyceti Sueciae》第一版的发现强调了为早期真菌学家的重要藏品保留特殊保护的重要性。它还让全世界感兴趣的真菌学家了解到格拉斯哥有一本未剪裁的初版副本。
{"title":"An uncut copy of Scleromyceti Sueciae: lost and then found.","authors":"Roy Watling","doi":"10.1186/s40529-024-00414-2","DOIUrl":"10.1186/s40529-024-00414-2","url":null,"abstract":"<p><strong>Background: </strong>A copy of Scleromyceti Sueciae, a work on which the nomenclature of many fungi is based was known to occur in Scotland's Glasgow University Botany Department but the buildings were devastated by fire in 2001 and the whereabouts of this important work, if it existed, was lost. Its re-finding is reported herein.</p><p><strong>Results: </strong>The Glasgow copy of Scleromyceti Sueciae, an uncut first edition of Fries' work, was located in the Glasgow Museums in its original cabinet being transferred there years before the fire and its specimens being now databased. It is one of the few existing uncut copies of this important scientific work and one of the best-preserved copies of the first edition.</p><p><strong>Conclusion: </strong>The discovery of this first edition of Scleromyceti Sueciae emphasizes the significance to reserve special conservation for important collections by early mycologists. It also allows interested mycologists world-wide to know of the existence in Glasgow of an uncut, first edition copy.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10907328/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139995600","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A comprehensive review on ecology, life cycle and use of Tecoma stans (bignoneaceae). 关于 Tecoma stans(木犀科)生态学、生命周期和用途的全面综述。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-13 DOI: 10.1186/s40529-024-00412-4
Simrat Singh, Chad Thomas Miller, Parminder Singh, Rishu Sharma, Nepu Rana, Ashok Kumar Dhakad, Rajesh Kumar Dubey

Tecoma stans is a widely distributed tall ornamental shrub in the plains of Indian subcontinent and is considered an invasive species across Argentina, Australia, South Africa, Pacific Islands and tropical regions of Asia. Besides having an ornamental significance, T. stans has been extensively investigated for its pharmaceutical applications as a source of bioactive compounds. In addition, the shrub is cultivated commercially as a potted flowering plant. We believe that T. stans, being a hardy, invasive and aggressively growing species, holds a considerable potential and a promising solution for re-greening waste and degraded lands outside its invasive range, due to its wider adaptability and drought tolerant characteristics. The shrub is an excellent source of pollen and nectar, that attracts diverse insect-pollinators and several species of birds. The prudent plantation of this shrub has the potential to restore the ecology of barren landscapes, that can change its perspective of 'being invasive' to 'being ecologically healthy' across the tropical, semi-arid and subtropical regions worldwide. This paper reviews the current updates on ecology, life cycle including morphology, plant growth characteristics, flowering phenology, reproductive biology, breeding system and fruiting of T. stans. In addition, details on insect-pollinator diversity and natural regeneration potential have also been discussed, besides highlighting its therapeutic and landscape use.

Tecoma stans 是一种广泛分布于印度次大陆平原的高大观赏灌木,被认为是阿根廷、澳大利亚、南非、太平洋岛屿和亚洲热带地区的入侵物种。除了具有观赏价值外,T. stans 还作为生物活性化合物的来源被广泛用于制药研究。此外,这种灌木还作为盆花植物进行商业栽培。我们相信,作为一种耐寒、入侵性强、生长旺盛的物种,T. stans 具有广泛的适应性和耐旱性,因此在其入侵范围以外的废弃地和退化地绿化方面具有相当大的潜力和前景。这种灌木是花粉和花蜜的极佳来源,能吸引多种昆虫授粉者和几种鸟类。在全球热带、半干旱和亚热带地区,谨慎种植这种灌木有可能恢复贫瘠地貌的生态,将其从 "入侵 "的角度转变为 "生态健康 "的角度。本文回顾了斯坦氏蜱生态学、生命周期(包括形态学)、植物生长特征、开花物候学、生殖生物学、繁殖系统和结实方面的最新进展。此外,还讨论了昆虫-授粉者多样性和自然再生潜力的细节,并强调了其治疗和景观用途。
{"title":"A comprehensive review on ecology, life cycle and use of Tecoma stans (bignoneaceae).","authors":"Simrat Singh, Chad Thomas Miller, Parminder Singh, Rishu Sharma, Nepu Rana, Ashok Kumar Dhakad, Rajesh Kumar Dubey","doi":"10.1186/s40529-024-00412-4","DOIUrl":"10.1186/s40529-024-00412-4","url":null,"abstract":"<p><p>Tecoma stans is a widely distributed tall ornamental shrub in the plains of Indian subcontinent and is considered an invasive species across Argentina, Australia, South Africa, Pacific Islands and tropical regions of Asia. Besides having an ornamental significance, T. stans has been extensively investigated for its pharmaceutical applications as a source of bioactive compounds. In addition, the shrub is cultivated commercially as a potted flowering plant. We believe that T. stans, being a hardy, invasive and aggressively growing species, holds a considerable potential and a promising solution for re-greening waste and degraded lands outside its invasive range, due to its wider adaptability and drought tolerant characteristics. The shrub is an excellent source of pollen and nectar, that attracts diverse insect-pollinators and several species of birds. The prudent plantation of this shrub has the potential to restore the ecology of barren landscapes, that can change its perspective of 'being invasive' to 'being ecologically healthy' across the tropical, semi-arid and subtropical regions worldwide. This paper reviews the current updates on ecology, life cycle including morphology, plant growth characteristics, flowering phenology, reproductive biology, breeding system and fruiting of T. stans. In addition, details on insect-pollinator diversity and natural regeneration potential have also been discussed, besides highlighting its therapeutic and landscape use.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10861415/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139721661","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dynamic organelle changes and autophagic processes in lily pollen germination. 百合花粉萌发过程中细胞器的动态变化和自噬过程
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-01-26 DOI: 10.1186/s40529-024-00410-6
Chih-Chung Yen, Chia-Mei Hsu, Pei-Luen Jiang, Guang-Yuh Jauh

Pollen germination is a crucial process in the life cycle of flowering plants, signifying the transition of quiescent pollen grains into active growth. This study delves into the dynamic changes within organelles and the pivotal role of autophagy during lily pollen germination. Initially, mature pollen grains harbor undifferentiated organelles, including amyloplasts, mitochondria, and the Golgi apparatus. However, germination unveils remarkable transformations, such as the redifferentiation of amyloplasts accompanied by starch granule accumulation. We investigate the self-sustained nature of amylogenesis during germination, shedding light on its association with osmotic pressure. Employing BODIPY 493/503 staining, we tracked lipid body distribution throughout pollen germination, both with or without autophagy inhibitors (3-MA, NEM). Typically, lipid bodies undergo polarized movement from pollen grains into elongating pollen tubes, a process crucial for directional growth. Inhibiting autophagy disrupted this essential lipid body redistribution, underscoring the interaction between autophagy and lipid body dynamics. Notably, the presence of tubular endoplasmic reticulum (ER)-like structures associated with developing amyloplasts and lipid bodies implies their participation in autophagy. Starch granules, lipid bodies, and membrane remnants observed within vacuoles further reinforce the involvement of autophagic processes. Among the autophagy inhibitors, particularly BFA, significantly impede germination and growth, thereby affecting Golgi morphology. Immunogold labeling substantiates the pivotal role of the ER in forming autophagosome-like compartments and protein localization. Our proposed speculative model of pollen germination encompasses proplastid differentiation and autophagosome formation. This study advances our understanding of organelle dynamics and autophagy during pollen germination, providing valuable insights into the realm of plant reproductive physiology.

花粉萌发是开花植物生命周期中的一个关键过程,标志着静止的花粉粒向活跃的生长过渡。本研究深入探讨了百合花粉萌发过程中细胞器的动态变化以及自噬的关键作用。最初,成熟的花粉粒含有未分化的细胞器,包括淀粉体、线粒体和高尔基体。然而,萌发过程中会发生显著的变化,例如淀粉体的再分化伴随着淀粉粒的积累。我们研究了淀粉在萌发过程中的自我维持性质,揭示了它与渗透压的关系。在使用或不使用自噬抑制剂(3-MA、NEM)的情况下,我们利用 BODIPY 493/503 染色法跟踪了整个花粉萌发过程中的脂质体分布。通常情况下,脂质体从花粉粒极化移动到伸长的花粉管中,这一过程对定向生长至关重要。抑制自噬会破坏这种重要的脂质体重新分布,从而强调自噬与脂质体动态之间的相互作用。值得注意的是,与发育中的淀粉体和脂质体相关的管状内质网(ER)样结构的存在意味着它们参与了自噬。在液泡中观察到的淀粉粒、脂质体和膜残余物进一步证实了自噬过程的参与。在自噬抑制剂中,特别是 BFA 会明显阻碍发芽和生长,从而影响高尔基体的形态。免疫金标记证实了ER在形成自噬体和蛋白质定位方面的关键作用。我们提出的花粉萌发推测模型包括原生质体分化和自噬体的形成。这项研究加深了我们对花粉萌发过程中细胞器动力学和自噬的理解,为植物生殖生理领域提供了宝贵的见解。
{"title":"Dynamic organelle changes and autophagic processes in lily pollen germination.","authors":"Chih-Chung Yen, Chia-Mei Hsu, Pei-Luen Jiang, Guang-Yuh Jauh","doi":"10.1186/s40529-024-00410-6","DOIUrl":"10.1186/s40529-024-00410-6","url":null,"abstract":"<p><p>Pollen germination is a crucial process in the life cycle of flowering plants, signifying the transition of quiescent pollen grains into active growth. This study delves into the dynamic changes within organelles and the pivotal role of autophagy during lily pollen germination. Initially, mature pollen grains harbor undifferentiated organelles, including amyloplasts, mitochondria, and the Golgi apparatus. However, germination unveils remarkable transformations, such as the redifferentiation of amyloplasts accompanied by starch granule accumulation. We investigate the self-sustained nature of amylogenesis during germination, shedding light on its association with osmotic pressure. Employing BODIPY 493/503 staining, we tracked lipid body distribution throughout pollen germination, both with or without autophagy inhibitors (3-MA, NEM). Typically, lipid bodies undergo polarized movement from pollen grains into elongating pollen tubes, a process crucial for directional growth. Inhibiting autophagy disrupted this essential lipid body redistribution, underscoring the interaction between autophagy and lipid body dynamics. Notably, the presence of tubular endoplasmic reticulum (ER)-like structures associated with developing amyloplasts and lipid bodies implies their participation in autophagy. Starch granules, lipid bodies, and membrane remnants observed within vacuoles further reinforce the involvement of autophagic processes. Among the autophagy inhibitors, particularly BFA, significantly impede germination and growth, thereby affecting Golgi morphology. Immunogold labeling substantiates the pivotal role of the ER in forming autophagosome-like compartments and protein localization. Our proposed speculative model of pollen germination encompasses proplastid differentiation and autophagosome formation. This study advances our understanding of organelle dynamics and autophagy during pollen germination, providing valuable insights into the realm of plant reproductive physiology.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10811312/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139563346","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Antibacterial, antioxidant, and anticancer potential of green fabricated silver nanoparticles made from Viburnum grandiflorum leaf extract. 用紫云英叶提取物制成的绿色银纳米粒子的抗菌、抗氧化和抗癌潜力。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-01-22 DOI: 10.1186/s40529-024-00411-5
Hina Talib, Ansar Mehmood, Muhammad Shoaib Amjad, Amna Mustafa, Muhammad Abdul Rauf Khan, Muhammad Raffi, Rizwan Taj Khan, Khawaja Shafique Ahmad, Huma Qureshi

Background: Recently, researchers are focusing on creating new tools to combat the antibiotic resistant bacteria and malignancy issues, which pose significant threats to humanity. Biosynthesized silver nanoparticles (AgNPs) are thought to be a potential solution to these issues. The biosynthesis method, known for its environmentally friendly and cost-effective characteristics, can produce small-sized AgNPs with antimicrobial and anticancer properties. In this study, AgNPs were bio-fabricated from the distilled water and methanolic extracts of Viburnum grandiflorum leaves. Physio-chemical characterization of the bio-fabricated AgNPs was conducted using UV-visible spectroscopy, scanning electron microscopy, energy dispersive X-ray, and X-ray diffraction analysis.

Results: AgNPs produced from the methanol extract were smaller in size (12.28 nm) compared to those from the aqueous extract (17.77 nm). The bioengineered AgNPs exhibited a circular shape with a crystalline nature. These biosynthesized AgNPs demonstrated excellent bactericidal activity against both gram-negative (Pseudomonas aeruginosa) and gram-positive (Staphylococcus aureus) bacteria. Highest antibacterial activity was observed with the methanol extract against P. aeruginosa (14.66 ± 0.74 mm). AgNPs from the methanol extract also displayed the highest antioxidant activity, with an IC50 value of 188.00 ± 2.67 μg/mL against 2,2-diphenyl-1-picrylhydrazyl (DPPH). Furthermore, AgNPs exhibited notable cytotoxic activity against Rhabdomyosarcoma cell line (RD cell) of human muscle cancer cell. The IC50 values calculated from the MTT assay were 26.28 ± 1.58 and 21.49 ± 1.44 μg/mL for AgNPs synthesized from aqueous and methanol extracts, respectively.

Conclusion: The methanol extract of V. grandiflorum leaves demonstrates significant potential for synthesizing AgNPs with effective antibacterial, antioxidant, and anticancer actions, making them applicable in various biomedical applications.

背景:最近,研究人员正集中精力开发新工具,以应对对人类构成重大威胁的抗生素耐药细菌和恶性肿瘤问题。生物合成银纳米粒子(AgNPs)被认为是解决这些问题的潜在方法。生物合成法以其环境友好和成本效益高的特点而著称,可以生产出具有抗菌和抗癌特性的小尺寸银纳米粒子。在本研究中,利用蒸馏水和甲醇萃取的大叶紫檀叶制成了 AgNPs。使用紫外可见光谱、扫描电子显微镜、能量色散 X 射线和 X 射线衍射分析对生物制造的 AgNPs 进行了物理化学表征:结果:与水提取物(17.77 nm)相比,甲醇提取物产生的 AgNPs 的尺寸较小(12.28 nm)。生物工程 AgNPs 呈圆形,具有结晶性质。这些生物合成的 AgNPs 对革兰氏阴性菌(铜绿假单胞菌)和革兰氏阳性菌(金黄色葡萄球菌)都具有出色的杀菌活性。甲醇提取物对铜绿假单胞菌的抗菌活性最高(14.66 ± 0.74 mm)。甲醇提取物中的 AgNPs 也显示出最高的抗氧化活性,对 2,2-二苯基-1-苦基肼(DPPH)的 IC50 值为 188.00 ± 2.67 μg/mL。此外,AgNPs 对人类肌肉癌细胞横纹肌肉瘤细胞系(RD 细胞)具有显著的细胞毒性活性。通过 MTT 试验计算得出,水提取物和甲醇提取物合成的 AgNPs 的 IC50 值分别为 26.28 ± 1.58 和 21.49 ± 1.44 μg/mL:V. grandiflorum叶片的甲醇提取物在合成具有有效抗菌、抗氧化和抗癌作用的AgNPs方面显示出巨大潜力,使其适用于各种生物医学应用。
{"title":"Antibacterial, antioxidant, and anticancer potential of green fabricated silver nanoparticles made from Viburnum grandiflorum leaf extract.","authors":"Hina Talib, Ansar Mehmood, Muhammad Shoaib Amjad, Amna Mustafa, Muhammad Abdul Rauf Khan, Muhammad Raffi, Rizwan Taj Khan, Khawaja Shafique Ahmad, Huma Qureshi","doi":"10.1186/s40529-024-00411-5","DOIUrl":"10.1186/s40529-024-00411-5","url":null,"abstract":"<p><strong>Background: </strong>Recently, researchers are focusing on creating new tools to combat the antibiotic resistant bacteria and malignancy issues, which pose significant threats to humanity. Biosynthesized silver nanoparticles (AgNPs) are thought to be a potential solution to these issues. The biosynthesis method, known for its environmentally friendly and cost-effective characteristics, can produce small-sized AgNPs with antimicrobial and anticancer properties. In this study, AgNPs were bio-fabricated from the distilled water and methanolic extracts of Viburnum grandiflorum leaves. Physio-chemical characterization of the bio-fabricated AgNPs was conducted using UV-visible spectroscopy, scanning electron microscopy, energy dispersive X-ray, and X-ray diffraction analysis.</p><p><strong>Results: </strong>AgNPs produced from the methanol extract were smaller in size (12.28 nm) compared to those from the aqueous extract (17.77 nm). The bioengineered AgNPs exhibited a circular shape with a crystalline nature. These biosynthesized AgNPs demonstrated excellent bactericidal activity against both gram-negative (Pseudomonas aeruginosa) and gram-positive (Staphylococcus aureus) bacteria. Highest antibacterial activity was observed with the methanol extract against P. aeruginosa (14.66 ± 0.74 mm). AgNPs from the methanol extract also displayed the highest antioxidant activity, with an IC<sub>50</sub> value of 188.00 ± 2.67 μg/mL against 2,2-diphenyl-1-picrylhydrazyl (DPPH). Furthermore, AgNPs exhibited notable cytotoxic activity against Rhabdomyosarcoma cell line (RD cell) of human muscle cancer cell. The IC<sub>50</sub> values calculated from the MTT assay were 26.28 ± 1.58 and 21.49 ± 1.44 μg/mL for AgNPs synthesized from aqueous and methanol extracts, respectively.</p><p><strong>Conclusion: </strong>The methanol extract of V. grandiflorum leaves demonstrates significant potential for synthesizing AgNPs with effective antibacterial, antioxidant, and anticancer actions, making them applicable in various biomedical applications.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10803688/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139511751","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A taxonomic revision of the genus Angelica (Apiaceae) in Taiwan with a new species A. aliensis. 台湾当归属(Apiaceae)的分类学修订及新种 A. aliensis。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-01-22 DOI: 10.1186/s40529-023-00407-7
Jenn-Che Wang, Hung-Hsin Chen, Tsai-Wen Hsu, Kuo-Hsiang Hung, Chi-Chun Huang

Background: Angelica L. sensu lato is a taxonomically complex genus, and many studies have utilized morphological and molecular features to resolve its classification issues. In Taiwan, there are six taxa within Angelica, and their taxonomic treatments have been a subject of controversy. In this study, we conducted a comprehensive analysis incorporating morphological and molecular (cpDNA and nrDNA) characteristics to revise the taxonomic treatments of Angelica in Taiwan.

Results: As a result of our research, we have revised the classification between A. dahurica var. formosana and A. pubescens and merged two varieties of A. morrisonicola into a single taxon. A new taxon, A. aliensis, has been identified and found to share a close relationship with A. tarokoensis. Based on the morphological and molecular characteristics data, it has been determined that the former three taxa should be grouped into the Eurasian Angelica clade, while the remaining four taxa should belong to the littoral Angelica clade. Furthermore, Angelica species in Taiwan distributed at higher altitudes displayed higher genetic diversity, implying that the central mountain range of Taiwan serves as a significant reservoir of plant biodiversity. Genetic drift, such as bottlenecks, has been identified as a potential factor leading to the fixation or reduction of genetic diversity of populations in most Angelica species. We provide key to taxa, synopsis, phenology, and distribution for each taxon of Taiwan.

Conclusions: Our comprehensive analysis of morphological and molecular features has shed light on the taxonomic complexities within Angelica in Taiwan, resolving taxonomic issues and providing valuable insights into the phylogenetic relationships of Angelica in Taiwan.

背景:当归(Angelica L. sensu lato)是一个分类复杂的属,许多研究利用形态学和分子特征来解决其分类问题。在台湾,当归有六个类群,它们的分类处理一直存在争议。在本研究中,我们结合形态学和分子(cpDNA 和 nrDNA)特征进行了综合分析,以修正台湾当归的分类处理:研究结果:我们修订了 A. dahurica var. formosana 和 A. pubescens 之间的分类,并将 A. morrisonicola 的两个变种合并为一个类群。新分类群 A. aliensis 被鉴定出来,并发现它与 A. tarokoensis 关系密切。根据形态和分子特征数据,确定前三个类群归入欧亚当归支系,其余四个类群归入滨海当归支系。此外,分布在海拔较高地区的台湾当归物种显示出较高的遗传多样性,这意味着台湾中部山脉是一个重要的植物多样性宝库。遗传漂移(如瓶颈)被认为是导致大多数当归种群遗传多样性固定或减少的潜在因素。我们提供了台湾各分类群的分类群关键、简介、物候学和分布情况:我们对形态学和分子特征的综合分析揭示了台湾当归分类的复杂性,解决了分类问题,并为台湾当归的系统发育关系提供了宝贵的见解。
{"title":"A taxonomic revision of the genus Angelica (Apiaceae) in Taiwan with a new species A. aliensis.","authors":"Jenn-Che Wang, Hung-Hsin Chen, Tsai-Wen Hsu, Kuo-Hsiang Hung, Chi-Chun Huang","doi":"10.1186/s40529-023-00407-7","DOIUrl":"10.1186/s40529-023-00407-7","url":null,"abstract":"<p><strong>Background: </strong>Angelica L. sensu lato is a taxonomically complex genus, and many studies have utilized morphological and molecular features to resolve its classification issues. In Taiwan, there are six taxa within Angelica, and their taxonomic treatments have been a subject of controversy. In this study, we conducted a comprehensive analysis incorporating morphological and molecular (cpDNA and nrDNA) characteristics to revise the taxonomic treatments of Angelica in Taiwan.</p><p><strong>Results: </strong>As a result of our research, we have revised the classification between A. dahurica var. formosana and A. pubescens and merged two varieties of A. morrisonicola into a single taxon. A new taxon, A. aliensis, has been identified and found to share a close relationship with A. tarokoensis. Based on the morphological and molecular characteristics data, it has been determined that the former three taxa should be grouped into the Eurasian Angelica clade, while the remaining four taxa should belong to the littoral Angelica clade. Furthermore, Angelica species in Taiwan distributed at higher altitudes displayed higher genetic diversity, implying that the central mountain range of Taiwan serves as a significant reservoir of plant biodiversity. Genetic drift, such as bottlenecks, has been identified as a potential factor leading to the fixation or reduction of genetic diversity of populations in most Angelica species. We provide key to taxa, synopsis, phenology, and distribution for each taxon of Taiwan.</p><p><strong>Conclusions: </strong>Our comprehensive analysis of morphological and molecular features has shed light on the taxonomic complexities within Angelica in Taiwan, resolving taxonomic issues and providing valuable insights into the phylogenetic relationships of Angelica in Taiwan.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10803708/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139511749","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An optimum study on the laser scanning confocal microscopy techniques for BiFC assay using plant protoplast. 利用植物原生质体进行生物燃料化学分析的激光扫描共聚焦显微镜技术优化研究。
IF 3.4 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-01-09 DOI: 10.1186/s40529-024-00409-z
Jinhong Yuan, Daiyu Li, Yi Liang, Yao Meng, Li Li, Lin Yang, Mingyue Pei, Liuchun Feng, Junhua Li

Background: The bimolecular fluorescence complementation (BiFC) assay is commonly used for investigating protein-protein interactions. While several BiFC detection systems have been developed, there is a limited amount of research focused on using laser scanning confocal microscope (LSCM) techniques to observe protoplasts. Protoplasts are more susceptible to damage and instability compared to their original cell state due to the preparation treatments they undergo, which makes it challenging for researchers to manipulate them during observation under LSCMs. Therefore, it is crucial to utilize microscope techniques properly and efficiently in BiFC assays.

Results: When the target fluorescence is weak, the autofluorescence of chloroplast particles in protoplasts can interfere with the detection of BiFC signals localized in the nuclear region. Spectrum analysis revealed that chloroplast autofluorescence can be excited by lasers of various types, with the highest fluorescence signal observed at around 660 nm. Furthermore, our investigation into the impact of different pipette tips on the integrity of protoplast samples indicated that the utilization of cut tips with larger openings can mitigate cell breakage. We presented a workflow of LSCM techniques for investigating protoplast BiFC and discussed the microscopic manipulation involved in sample preparation and image capturing.

Conclusion: When the BiFC signals are weak, they may be affected by chloroplast autofluorescence. However, when used properly, the autofluorescence of chloroplasts can serve as an excellent internal marker for effectively distinguishing other signals. In combination with other findings, this study can provide valuable reference for researchers conducting BiFC assays and related studies.

背景:双分子荧光互补(BiFC)检测法常用于研究蛋白质与蛋白质之间的相互作用。虽然目前已开发出多种 BiFC 检测系统,但利用激光扫描共聚焦显微镜(LSCM)技术观察原生质体的研究还很有限。由于原生质体要经过制备处理,因此与原始细胞状态相比,原生质体更容易受损和不稳定,这使得研究人员在 LSCM 观察期间对其进行操作具有挑战性。因此,在 BiFC 检测中正确有效地利用显微镜技术至关重要:结果:当目标荧光较弱时,原生质体中叶绿体颗粒的自发荧光会干扰对核区局部 BiFC 信号的检测。光谱分析显示,叶绿体自发荧光可被各种类型的激光激发,在 660 纳米波长处观察到的荧光信号最高。此外,我们还研究了不同移液器吸头对原生质样本完整性的影响,结果表明,使用开口较大的切割吸头可减轻细胞破损。我们介绍了用于研究原生质体 BiFC 的 LSCM 技术工作流程,并讨论了样品制备和图像捕获过程中涉及的显微操作:结论:当 BiFC 信号较弱时,它们可能会受到叶绿体自发荧光的影响。然而,如果使用得当,叶绿体的自发荧光可以作为有效区分其他信号的极佳内部标记。结合其他研究结果,本研究可为开展生物荧光测定及相关研究的研究人员提供有价值的参考。
{"title":"An optimum study on the laser scanning confocal microscopy techniques for BiFC assay using plant protoplast.","authors":"Jinhong Yuan, Daiyu Li, Yi Liang, Yao Meng, Li Li, Lin Yang, Mingyue Pei, Liuchun Feng, Junhua Li","doi":"10.1186/s40529-024-00409-z","DOIUrl":"10.1186/s40529-024-00409-z","url":null,"abstract":"<p><strong>Background: </strong>The bimolecular fluorescence complementation (BiFC) assay is commonly used for investigating protein-protein interactions. While several BiFC detection systems have been developed, there is a limited amount of research focused on using laser scanning confocal microscope (LSCM) techniques to observe protoplasts. Protoplasts are more susceptible to damage and instability compared to their original cell state due to the preparation treatments they undergo, which makes it challenging for researchers to manipulate them during observation under LSCMs. Therefore, it is crucial to utilize microscope techniques properly and efficiently in BiFC assays.</p><p><strong>Results: </strong>When the target fluorescence is weak, the autofluorescence of chloroplast particles in protoplasts can interfere with the detection of BiFC signals localized in the nuclear region. Spectrum analysis revealed that chloroplast autofluorescence can be excited by lasers of various types, with the highest fluorescence signal observed at around 660 nm. Furthermore, our investigation into the impact of different pipette tips on the integrity of protoplast samples indicated that the utilization of cut tips with larger openings can mitigate cell breakage. We presented a workflow of LSCM techniques for investigating protoplast BiFC and discussed the microscopic manipulation involved in sample preparation and image capturing.</p><p><strong>Conclusion: </strong>When the BiFC signals are weak, they may be affected by chloroplast autofluorescence. However, when used properly, the autofluorescence of chloroplasts can serve as an excellent internal marker for effectively distinguishing other signals. In combination with other findings, this study can provide valuable reference for researchers conducting BiFC assays and related studies.</p>","PeriodicalId":9185,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10776556/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139401839","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Botanical Studies
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1