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Mixed-Grade Urothelial Carcinoma: Insights Into Clinical Behavior and Prognostic Implications Compared to Pure Low-Grade and High-Grade Urothelial Carcinomas. 混合分级尿路上皮癌:与纯粹的低分级和高级别尿路上皮癌相比,对临床行为和预后影响的见解。
Pub Date : 2024-03-04 DOI: 10.5858/arpa.2023-0367-OA
Fateme Khalatbari, Miremad Moafi-Madani, Ali Amin

Context.—: Low-grade urothelial carcinoma (LGUC) and high-grade urothelial carcinoma (HGUC) are distinguished based on architectural and cytological features, with the anticipation that HGUC exhibits more aggressive behavior and a worse prognosis compared to LGUC. The current World Health Organization classification recognizes mixed-grade urothelial carcinoma (MGUC, for the purposes of this study) as a separate category that behaves like LGUC if the high-grade component is <5% and states that any tumor with ≥5% high-grade component should be graded as HGUC.

Objective.—: To evaluate the risk of tumor recurrence, grade, and stage progression of MGUC compared to LGUC and HGUC.

Design.—: A total of 150 de novo noninvasive polypoid urothelial carcinomas (41 cases of MGUC, 59 of LGUC, and 50 of HGUC) were included. Tumor recurrence, grade, and stage progression were compared among the MGUC, LGUC, and HGUC cases.

Results.—: Tumor recurrence was observed in 14 of 41 (34.2%) of MGUC, 33 of 59 (55.9%) of LGUC, and 28 of 50 (56%) of HGUC. Grade progression occurred in 5 of 41 (12.2%) of MGUC cases and 5 of 59 (8.5%) of LGUC cases. No stage progression was observed in LGUC or MGUC cases, while 7 of 50 (14%) of HGUC cases showed stage progression. MGUC was associated with lower odds and hazard of recurrence compared to LGUC. The rate of grade progression was higher in MGUC and occurred after a shorter interval compared to LGUC.

Conclusions.—: MGUC showed a prognosis closer to LGUC. Our study supports the current recommendation to classify tumors with <5% high-grade component as MGUC, as these tumors display clinical characteristics and outcomes close to that of pure LGUC.

内涵:低级别尿路上皮癌(LGUC)和高级别尿路上皮癌(HGUC)是根据结构和细胞学特征区分的,预计与低级别尿路上皮癌相比,高级别尿路上皮癌更具侵袭性,预后更差。目前世界卫生组织的分类将混合型尿路上皮癌(MGUC,在本研究中称为混合型尿路上皮癌)作为一个单独的类别,如果高级别成分是客观存在的,则其表现与 LGUC 相似:与 LGUC 和 HGUC 相比,评估 MGUC 的肿瘤复发风险、级别和分期进展:共纳入 150 例新发的非浸润性多发性尿路上皮癌(41 例 MGUC、59 例 LGUC 和 50 例 HGUC)。比较了MGUC、LGUC和HGUC病例的肿瘤复发、分级和分期进展情况:41例MGUC中有14例(34.2%)观察到肿瘤复发,59例LGUC中有33例(55.9%)观察到肿瘤复发,50例HGUC中有28例(56%)观察到肿瘤复发。41例MGUC中有5例(12.2%)出现分期进展,59例LGUC中有5例(8.5%)出现分期进展。在 LGUC 或 MGUC 病例中未观察到分期进展,而在 50 例 HGUC 病例中有 7 例(14%)出现分期进展。与LGUC相比,MGUC的复发几率和风险较低。与LGUC相比,MGUC的分期进展率更高,间隔时间更短:结论:MGUC的预后更接近LGUC。我们的研究支持目前的建议,将肿瘤分为
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引用次数: 0
Blast Phase of Myeloproliferative Neoplasm Resembles Acute Myeloid Leukemia, Myelodysplasia-Related, in Clinical Presentation, Cytogenetic Pattern, and Genomic Profile, and Often Undergoes Reversion to Second Chronic Phase Status After Induction Chemotherapy. 骨髓增殖性肿瘤的爆发期在临床表现、细胞遗传学模式和基因组图谱上与骨髓增生异常相关的急性髓性白血病相似,而且在诱导化疗后往往会恢复到第二慢性期状态。
Pub Date : 2024-03-01 DOI: 10.5858/arpa.2023-0363-OA
Yue Zhao, Imran Siddiqi, Tyler J Wildes, Derald Charles, Kristen Deak, Endi Wang

Context.—: BCR::ABL-negative myeloproliferative neoplasm (MPN) has a prolonged clinical course, and some cases eventually undergo transformation to blast phase; its pathogenesis remains to be elucidated.

Objective.—: To evaluate the clinicopathologic characteristics of MPN in blast phase.

Design.—: The study aimed to retrospectively analyze the clinical and laboratory data of 24 cases.

Results.—: Median latency to blast phase was 48 months (range, 7-384 months). Complex karyotypes were seen in 12 of the 24 cases (50%). Overall, 16 cases (66.7%) exhibited high allele burdens of MPN driver mutations along with increased blasts, consistent with linear clonal evolution, whereas the remainder (8; 33.3%) showed loss or partial loss of the driver mutation suggestive of a parallel evolution. Additional mutations were noted in 23 cases (100%), including TP53 mutations in 10 of 24 cases (41.7%). Following chemotherapy, 15 of the 24 patients (62.5%) reverted to a second chronic phase while retaining or regaining MPN driver mutations and losing blast-related mutations, although 9 of the 15 patients (60%) later died of disease progression. Median overall survival was 10 months (CI, 4.6-15.4), with those harboring complex karyotypes demonstrating decreased survival (6 versus 29 months; P = .004).

Conclusions.—: MPN-blast phase resembles acute myeloid leukemia, myelodysplasia-related, in cytogenetic pattern, mutation profile, and clinical outcome. Two patterns of clonal evolution are inferred by dynamic analysis of mutation profiles: linear and parallel evolutions. Although overall survival was dismal, 62.5% of our cases achieved second chronic phase, and they showed better survival than those without second chronic phase.

背景BCR::ABL阴性骨髓增生性肿瘤(MPN)的临床病程较长,部分病例最终会转变为爆发期,其发病机制仍有待阐明:评估爆破期 MPN 的临床病理特征:研究旨在回顾性分析24例病例的临床和实验室数据:中位潜伏期为48个月(7-384个月)。24 例病例中有 12 例(50%)出现复杂核型。总体而言,16 个病例(66.7%)表现出高等位基因负担的 MPN 驱动基因突变,同时出现胚泡增多,这与线性克隆进化相一致,而其余病例(8 个;33.3%)则表现出驱动基因突变的缺失或部分缺失,提示为平行进化。23例(100%)患者出现了其他突变,包括24例中的10例(41.7%)出现了TP53突变。化疗后,24 例患者中有 15 例(62.5%)转入第二慢性期,同时保留或恢复了 MPN 驱动基因突变,失去了爆炸相关基因突变,但这 15 例患者中有 9 例(60%)后来死于疾病进展。中位总生存期为10个月(CI,4.6-15.4),携带复杂核型的患者生存期缩短(6个月对29个月;P = .004):结论:骨髓增生性白血病的细胞遗传学模式、基因突变情况和临床结果与骨髓增生异常相关的急性髓性白血病相似。通过对突变图谱的动态分析,可以推断出克隆演化的两种模式:线性演化和平行演化。虽然总生存率很低,但我们的病例中有62.5%达到了第二慢性期,而且他们的生存率高于没有第二慢性期的病例。
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引用次数: 0
Rapid Examination of Nonprocessed Renal Cell Carcinoma Using Nonlinear Microscopy. 利用非线性显微镜快速检查未加工的肾细胞癌
Pub Date : 2024-02-27 DOI: 10.5858/arpa.2023-0320-OA
Yaileen D Guzmán-Arocho, Timothy D Weber, Taylor St Jacques, James G Fujimoto, Seymour Rosen, Yue Sun

Context.—: Histology, the traditional method of examining surgical tissue under a microscope, is a time-consuming process involving the fixation of tissue in formalin, dehydration, embedding in paraffin, and cutting into thin sections for hematoxylin-eosin (H&E) staining. Frozen section analysis is a faster alternative used in surgery to quickly evaluate tissue, but it has limitations, such as the size of the specimens that can be analyzed and difficulties with fatty and bony tissues.

Objective.—: To rapidly examine nonprocessed kidney tumors using nonlinear microscopy (NLM), a fluorescence microscopy technique that can rapidly visualize fresh or fixed, rapidly stained, nonprocessed tissue resembling H&E histology. This technology eliminates the need for fixation, embedding, microtome sectioning, or slide preparation.

Design.—: In this study, a total of 190 tissue specimens were collected from 46 patients who underwent partial or radical nephrectomy.

Results.—: Two genitourinary pathologists confirmed that diagnostically important features present in the H&E images could also be identified in the NLM images.

Conclusions.—: The results of this study demonstrated that NLM had a high degree of correspondence with H&E staining for the classical variants of renal cell carcinoma. NLM offers several clinical benefits, such as facilitating rapid renal cell carcinoma diagnosis, assessment of targeted kidney biopsies for both tumor and medical kidney diseases, and collection of fresh renal cell carcinoma tissue for molecular studies.

内涵组织学是在显微镜下检查手术组织的传统方法,是一个耗时的过程,包括将组织固定在福尔马林中、脱水、包埋在石蜡中、切成薄片进行苏木精-伊红(H&E)染色。冷冻切片分析是外科手术中用于快速评估组织的一种更快捷的替代方法,但它也有局限性,例如可分析标本的大小以及处理脂肪和骨组织的困难:使用非线性显微镜(NLM)快速检查未经处理的肾脏肿瘤。NLM 是一种荧光显微镜技术,可快速观察新鲜或固定、快速染色、未经处理的组织,类似于 H&E 组织学。该技术无需进行固定、包埋、显微切片或切片制备:在这项研究中,从 46 名接受肾部分切除术或根治术的患者身上共收集了 190 份组织标本:两位泌尿生殖系统病理学家证实,H&E 图像中的重要诊断特征也可在 NLM 图像中识别:这项研究的结果表明,NLM 与 H&E 染色对肾细胞癌经典变种的对应程度很高。NLM 具有多种临床优势,如有助于快速诊断肾细胞癌、评估肿瘤和内科肾病的目标肾活检,以及收集新鲜肾细胞癌组织用于分子研究。
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引用次数: 0
Evaluation of a Deep Learning Model for Metastatic Squamous Cell Carcinoma Prediction From Whole Slide Images. 评估从全切片图像预测转移性鳞状细胞癌的深度学习模型
Pub Date : 2024-02-23 DOI: 10.5858/arpa.2023-0406-OA
Makoto Abe, Fahdi Kanavati, Masayuki Tsuneki

Context.—: Squamous cell carcinoma (SCC) is a histologic type of cancer that exhibits various degrees of keratinization. Identifying lymph node metastasis in SCC is crucial for prognosis and treatment strategies. Although artificial intelligence (AI) has shown promise in cancer prediction, applications specifically targeting SCC are limited.

Objective.—: To design and validate a deep learning model tailored to predict metastatic SCC in radical lymph node dissection specimens, using whole slide images (WSIs).

Design.—: Using the EfficientNetB1 architecture, a model was trained on 6587 WSIs (2413 SCC and 4174 nonneoplastic) from several hospitals, encompassing esophagus, head and neck, lung, and skin specimens. The training exclusively relied on WSI-level labels without annotations. We evaluated the model on a test set consisting of 541 WSIs (41 SCC and 500 nonneoplastic) of radical lymph node dissection specimens.

Results.—: The model exhibited high performance, with receiver operating characteristic curve areas under the curve between 0.880 and 0.987 in detecting SCC metastases in lymph nodes. Although true positives and negatives were accurately identified, certain limitations were observed. These included false positives due to germinal centers, dust cell aggregations, and specimen-handling artifacts, as well as false negatives due to poor differentiation.

Conclusions.—: The developed artificial intelligence model presents significant potential in enhancing SCC lymph node detection, offering workload reduction for pathologists and increasing diagnostic efficiency. Continuous refinement is needed to overcome existing challenges, making the model more robust and clinically relevant.

背景:鳞状细胞癌(SCC)是一种组织学类型的癌症,表现出不同程度的角化。识别鳞状细胞癌的淋巴结转移对预后和治疗策略至关重要。虽然人工智能(AI)在癌症预测方面已显示出前景,但专门针对 SCC 的应用还很有限:利用全切片图像(WSI)设计并验证一种深度学习模型,该模型专门用于预测根治性淋巴结清扫标本中的转移性 SCC:利用 EfficientNetB1 架构,对来自多家医院的 6587 个 WSI(2413 个 SCC 和 4174 个非肿瘤)进行了模型训练,其中包括食管、头颈、肺和皮肤标本。训练完全依赖于没有注释的 WSI 级别标签。我们在由 541 个 WSI(41 个 SCC 和 500 个非肿瘤)组成的根治性淋巴结清扫标本测试集上对该模型进行了评估:该模型在检测淋巴结中的 SCC 转移方面表现出很高的性能,接收者操作特征曲线下面积介于 0.880 和 0.987 之间。虽然真阳性和假阴性都能准确识别,但也发现了一些局限性。这些限制包括由于生殖中心、尘埃细胞聚集和标本处理假象造成的假阳性,以及由于分化不良造成的假阴性:所开发的人工智能模型在加强 SCC 淋巴结检测、减少病理学家工作量和提高诊断效率方面具有巨大潜力。需要不断改进以克服现有的挑战,使模型更加稳健、更贴近临床。
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引用次数: 0
Diagnostic Pearls and Pitfalls in the Evaluation of Biopsies of the Pancreas. 胰腺活组织检查的诊断要点和误区。
Pub Date : 2024-02-23 DOI: 10.5858/arpa.2023-0426-RA
Claudio Luchini

Context.—: The examination of small pancreatic biopsies is a difficult task for pathologists. This is due to the scant and fragmented material often obtained from diagnostic procedures as well as the significant overlap between different neoplastic and nonneoplastic entities. In the upcoming neoadjuvant era, biopsies could become even more important, representing the only possibility to look at the real histomorphology of tumors before chemotherapy-induced modifications.

Objectives.—: To summarize and discuss the state-of-the-art diagnostic workflow for small pancreatic biopsies, including the most important morphologic and immunohistochemical features and molecular alterations. The main diagnostic pearls and pitfalls of this challenging scenario are also discussed. The most important topics of this review are represented by: (1) pancreatic ductal adenocarcinoma, along with its main differential diagnoses, including autoimmune pancreatitis; (2) solid hypercellular neoplasms, including neuroendocrine neoplasms, acinar cell carcinoma, pancreatoblastoma, and solid pseudopapillary neoplasms; and (3) cystic lesions. Real-world considerations will be also presented and discussed.

Data sources.—: Sources included a literature review of published studies and the author's own work.

Conclusions.—: The correct diagnosis of pancreatic lesions is a crucial step in the therapeutic journey of patients. It should be based on robust, standardized, and reliable hallmarks. As presented and discussed here, the integration of morphology with immunohistochemistry, and in selected cases, with molecular analysis, represents a decisive step in this complex scenario.

背景对病理学家来说,胰腺小活检的检查是一项艰巨的任务。这是因为在诊断过程中通常只能获得少量零碎的材料,而且不同的肿瘤实体和非肿瘤实体之间存在大量重叠。在即将到来的新辅助治疗时代,活检可能会变得更加重要,这是在化疗引起肿瘤改变之前观察肿瘤真实组织形态学的唯一可能:总结并讨论小胰腺活检的最新诊断流程,包括最重要的形态学和免疫组化特征以及分子改变。此外,还讨论了这种具有挑战性的情况下的主要诊断珍珠和陷阱。本综述最重要的主题包括(1) 胰腺导管腺癌及其主要鉴别诊断,包括自身免疫性胰腺炎;(2) 实性高细胞性肿瘤,包括神经内分泌肿瘤、尖细胞癌、胰母细胞瘤和实性假乳头状肿瘤;以及 (3) 囊性病变。还将介绍和讨论现实世界中的注意事项:数据来源包括已发表研究的文献综述和作者本人的工作:胰腺病变的正确诊断是患者治疗过程中至关重要的一步。正确诊断应基于可靠、标准化的标志。正如本文所介绍和讨论的那样,将形态学与免疫组化结合起来,并在某些情况下与分子分析结合起来,是这一复杂情况下的决定性一步。
{"title":"Diagnostic Pearls and Pitfalls in the Evaluation of Biopsies of the Pancreas.","authors":"Claudio Luchini","doi":"10.5858/arpa.2023-0426-RA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0426-RA","url":null,"abstract":"<p><strong>Context.—: </strong>The examination of small pancreatic biopsies is a difficult task for pathologists. This is due to the scant and fragmented material often obtained from diagnostic procedures as well as the significant overlap between different neoplastic and nonneoplastic entities. In the upcoming neoadjuvant era, biopsies could become even more important, representing the only possibility to look at the real histomorphology of tumors before chemotherapy-induced modifications.</p><p><strong>Objectives.—: </strong>To summarize and discuss the state-of-the-art diagnostic workflow for small pancreatic biopsies, including the most important morphologic and immunohistochemical features and molecular alterations. The main diagnostic pearls and pitfalls of this challenging scenario are also discussed. The most important topics of this review are represented by: (1) pancreatic ductal adenocarcinoma, along with its main differential diagnoses, including autoimmune pancreatitis; (2) solid hypercellular neoplasms, including neuroendocrine neoplasms, acinar cell carcinoma, pancreatoblastoma, and solid pseudopapillary neoplasms; and (3) cystic lesions. Real-world considerations will be also presented and discussed.</p><p><strong>Data sources.—: </strong>Sources included a literature review of published studies and the author's own work.</p><p><strong>Conclusions.—: </strong>The correct diagnosis of pancreatic lesions is a crucial step in the therapeutic journey of patients. It should be based on robust, standardized, and reliable hallmarks. As presented and discussed here, the integration of morphology with immunohistochemistry, and in selected cases, with molecular analysis, represents a decisive step in this complex scenario.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139934638","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fumarate Hydratase-Deficient Renal Cell Carcinoma With Predominant Tubulocystic Features Mimics Tubulocystic Renal Cell Carcinoma. 富马酸氢化酶缺陷型肾细胞癌以管囊肿为主要特征,与管囊肿型肾细胞癌相似。
Pub Date : 2024-02-23 DOI: 10.5858/arpa.2023-0330-OA
Xiaoqun Yang, Yang Liu, Huafeng Wang, Yunze Xu, Huizhi Zhang, Ming Zhao, Xiaoqing Luo, Hongtao Jin, Ji Xiong, Lili Tao, Jiankun Xu, Luting Zhou, Xiangyun Li, Haimin Xu, Lei Dong, Chaofu Wang

Context.—: Fumarate hydratase (FH)-deficient renal cell carcinoma (RCC) rarely exhibits a predominant tubulocystic architecture with few other components. RCC with pure tubules and cysts lined by eosinophilic tumor cells with prominent nucleoli would raise the diagnosis of tubulocystic RCC. It is important to differentiate the 2 entities because they lead to different outcomes.

Objective.—: To address the concern, a multicenter study was implemented to explore useful clinicopathologic features in differentiation between tubulocystic FH-deficient RCC and tubulocystic RCC.

Design.—: Clinical factors included age, sex, tumor size, and outcome. Morphologic factors included cell morphology, presence or absence of a nontubulocystic component, and stromal findings. Immunohistochemistry, fluorescence in situ hybridization, and next-generation sequencing were performed to explore the protein expression and molecular profiles of the 2 entities.

Results.—: We evaluated 6 patients with tubulocystic RCC and 10 patients with tubulocystic FH-deficient RCC. Tubulocystic RCC exhibited a small size (<4.0 cm, pT1a), low Ki-67 index (<5%), retained FH, and negative 2SC expression. Tubulocystic FH-deficient RCC had a relatively large size and a high Ki-67 index. Perinucleolar haloes, loss of FH, and 2SC positivity were always observed. Pure tubulocystic architecture was not observed in FH-deficient RCC, because focal nontubulocystic components can always be seen.

Conclusions.—: We emphasized multiple sectioning to identify a nontubulocystic architecture to exclude tubulocystic RCC. Moreover, tumor size, FH/2SC staining, and the Ki-67 index can differentiate tubulocystic FH-deficient RCC from tubulocystic RCC. The diagnosis of tubulocystic RCC was not recommended in renal mass biopsy because of the limited tissues sampled.

背景:富马酸氢化酶(FH)缺陷型肾细胞癌(RCC)很少表现出以小管囊肿为主、其他成分很少的结构。肾小管和囊肿内有嗜酸性肿瘤细胞,核小体突出的RCC可诊断为肾小管囊性RCC。区分这两种实体非常重要,因为它们会导致不同的结果:为了解决这一问题,我们开展了一项多中心研究,以探索鉴别管状囊肿型FH缺乏症RCC和管状囊肿型RCC的有用临床病理特征:临床因素包括年龄、性别、肿瘤大小和预后。形态学因素包括细胞形态、是否存在非管状囊肿成分以及基质发现。通过免疫组化、荧光原位杂交和新一代测序,研究了这两种实体的蛋白质表达和分子特征:我们评估了6例管状囊肿型RCC患者和10例管状囊肿型FH缺陷型RCC患者。管状囊肿型 RCC 体积较小(结论):我们强调通过多次切片检查来确定非管状囊肿结构,以排除管状囊肿型 RCC。此外,肿瘤大小、FH/2SC染色和Ki-67指数可以区分管状囊肿型FH缺陷RCC和管状囊肿型RCC。由于取样组织有限,不建议在肾脏肿块活检中诊断出肾小管囊肿型 RCC。
{"title":"Fumarate Hydratase-Deficient Renal Cell Carcinoma With Predominant Tubulocystic Features Mimics Tubulocystic Renal Cell Carcinoma.","authors":"Xiaoqun Yang, Yang Liu, Huafeng Wang, Yunze Xu, Huizhi Zhang, Ming Zhao, Xiaoqing Luo, Hongtao Jin, Ji Xiong, Lili Tao, Jiankun Xu, Luting Zhou, Xiangyun Li, Haimin Xu, Lei Dong, Chaofu Wang","doi":"10.5858/arpa.2023-0330-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0330-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Fumarate hydratase (FH)-deficient renal cell carcinoma (RCC) rarely exhibits a predominant tubulocystic architecture with few other components. RCC with pure tubules and cysts lined by eosinophilic tumor cells with prominent nucleoli would raise the diagnosis of tubulocystic RCC. It is important to differentiate the 2 entities because they lead to different outcomes.</p><p><strong>Objective.—: </strong>To address the concern, a multicenter study was implemented to explore useful clinicopathologic features in differentiation between tubulocystic FH-deficient RCC and tubulocystic RCC.</p><p><strong>Design.—: </strong>Clinical factors included age, sex, tumor size, and outcome. Morphologic factors included cell morphology, presence or absence of a nontubulocystic component, and stromal findings. Immunohistochemistry, fluorescence in situ hybridization, and next-generation sequencing were performed to explore the protein expression and molecular profiles of the 2 entities.</p><p><strong>Results.—: </strong>We evaluated 6 patients with tubulocystic RCC and 10 patients with tubulocystic FH-deficient RCC. Tubulocystic RCC exhibited a small size (<4.0 cm, pT1a), low Ki-67 index (<5%), retained FH, and negative 2SC expression. Tubulocystic FH-deficient RCC had a relatively large size and a high Ki-67 index. Perinucleolar haloes, loss of FH, and 2SC positivity were always observed. Pure tubulocystic architecture was not observed in FH-deficient RCC, because focal nontubulocystic components can always be seen.</p><p><strong>Conclusions.—: </strong>We emphasized multiple sectioning to identify a nontubulocystic architecture to exclude tubulocystic RCC. Moreover, tumor size, FH/2SC staining, and the Ki-67 index can differentiate tubulocystic FH-deficient RCC from tubulocystic RCC. The diagnosis of tubulocystic RCC was not recommended in renal mass biopsy because of the limited tissues sampled.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139934657","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Approaches for Performance Verification Toward Standardization of Peripheral Blood Regulatory T-Cell Detection by Flow Cytometry. 通过流式细胞术实现外周血调节性 T 细胞检测标准化的性能验证方法。
Pub Date : 2024-02-22 DOI: 10.5858/arpa.2023-0284-OA
Mei Liu, Jin-Peng Liu, Pan Wang, Ya-Jing Fu, Min Zhao, Yong-Jun Jiang, Zi-Ning Zhang, Hong Shang

Context.—: Regulatory T-cell (Treg) detection in peripheral blood, based on flow cytometry, is invaluable for diagnosis and treatment of immune-mediated diseases. However, there is a lack of reliable methods to verify the performance, which is pivotal towards standardization of the Tregs assay.

Objective.—: To conduct standardization studies and verify the performance of 3 commercially available reagent sets for the Tregs assay based on flow cytometry and agreement analysis for Treg detection across the different reagent sets.

Design.—: The analytical performance of Tregs assay using reagent sets supplied by 3 manufacturers was evaluated after establishing the gating strategy and determining the optimal antibody concentration. Postcollection sample stability was evaluated, as well as the repeatability, reproducibility, reportable range, linearity, and assay carryover. Agreement between the different assays was assessed via Bland-Altman plots and linear regression analysis. The relationship between the frequency of CD4+CD25+CD127low/- Tregs and CD4+CD25+Foxp3+ Tregs was evaluated.

Results.—: The postcollection sample stability was set at 72 hours after collection at room temperature. The accuracy, repeatability, reproducibility, and accuracy all met the requirements for clinical analysis. Excellent linearity, with R2 ≥0.9 and no assay carryover, was observed. For reportable range, a minimum of 1000 events in the CD3+CD4+ gate was required for Tregs assay. Moreover, the results for Tregs labeled by antibodies from the 3 manufacturers were in good agreement. The percentage of CD4+CD25+CD127low/- Tregs was closely correlated with CD4+CD25+Foxp3+ Tregs.

Conclusions.—: This is the first study to evaluate systematically the measurement performance of Tregs in peripheral blood by flow cytometry, which provides a practical solution to verifying the performance of flow cytometry-based immune monitoring projects in clinical practice.

背景基于流式细胞术检测外周血中的调节性 T 细胞 (Treg) 对于诊断和治疗免疫介导疾病非常重要。然而,目前缺乏可靠的方法来验证其性能,而这对 Tregs 检测的标准化至关重要:基于流式细胞术和不同试剂盒 Treg 检测的一致性分析,开展标准化研究并验证 3 种市售 Tregs 检测试剂盒的性能:设计: 在确定了门控策略和最佳抗体浓度之后,使用 3 家生产商提供的试剂盒对 Tregs 检测的分析性能进行了评估。评估了采集后样本的稳定性、重复性、再现性、可报告范围、线性度和测定携带率。通过Bland-Altman图和线性回归分析评估了不同检测方法之间的一致性。评估了 CD4+CD25+CD127low/- Tregs 和 CD4+CD25+Foxp3+ Tregs 频率之间的关系:样品采集后的稳定性定为室温下采集后 72 小时。准确度、重复性、再现性和精确度均符合临床分析的要求。线性度极佳,R2 ≥0.9,且无测定携带。就可报告范围而言,Tregs 检测要求 CD3+CD4+ 门至少有 1000 个事件。此外,3 家生产商的抗体标记 Tregs 的结果非常一致。CD4+CD25+CD127low/- Tregs的百分比与CD4+CD25+Foxp3+ Tregs密切相关:这是第一项通过流式细胞术系统评估外周血中 Tregs 测量性能的研究,为验证基于流式细胞术的免疫监测项目在临床实践中的性能提供了实用的解决方案。
{"title":"Approaches for Performance Verification Toward Standardization of Peripheral Blood Regulatory T-Cell Detection by Flow Cytometry.","authors":"Mei Liu, Jin-Peng Liu, Pan Wang, Ya-Jing Fu, Min Zhao, Yong-Jun Jiang, Zi-Ning Zhang, Hong Shang","doi":"10.5858/arpa.2023-0284-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0284-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Regulatory T-cell (Treg) detection in peripheral blood, based on flow cytometry, is invaluable for diagnosis and treatment of immune-mediated diseases. However, there is a lack of reliable methods to verify the performance, which is pivotal towards standardization of the Tregs assay.</p><p><strong>Objective.—: </strong>To conduct standardization studies and verify the performance of 3 commercially available reagent sets for the Tregs assay based on flow cytometry and agreement analysis for Treg detection across the different reagent sets.</p><p><strong>Design.—: </strong>The analytical performance of Tregs assay using reagent sets supplied by 3 manufacturers was evaluated after establishing the gating strategy and determining the optimal antibody concentration. Postcollection sample stability was evaluated, as well as the repeatability, reproducibility, reportable range, linearity, and assay carryover. Agreement between the different assays was assessed via Bland-Altman plots and linear regression analysis. The relationship between the frequency of CD4+CD25+CD127low/- Tregs and CD4+CD25+Foxp3+ Tregs was evaluated.</p><p><strong>Results.—: </strong>The postcollection sample stability was set at 72 hours after collection at room temperature. The accuracy, repeatability, reproducibility, and accuracy all met the requirements for clinical analysis. Excellent linearity, with R2 ≥0.9 and no assay carryover, was observed. For reportable range, a minimum of 1000 events in the CD3+CD4+ gate was required for Tregs assay. Moreover, the results for Tregs labeled by antibodies from the 3 manufacturers were in good agreement. The percentage of CD4+CD25+CD127low/- Tregs was closely correlated with CD4+CD25+Foxp3+ Tregs.</p><p><strong>Conclusions.—: </strong>This is the first study to evaluate systematically the measurement performance of Tregs in peripheral blood by flow cytometry, which provides a practical solution to verifying the performance of flow cytometry-based immune monitoring projects in clinical practice.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139934637","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Digital Pathology in the Detection of Infectious Microorganisms: An Evaluation of Its Strengths and Weaknesses Across a Panel of Immunohistochemical and Histochemical Stains Routinely Used in Diagnostic Surgical Pathology. 数字病理学在传染性微生物检测中的应用:评估在外科病理诊断中常规使用的免疫组化和组织化学染色的优缺点。
Pub Date : 2024-02-22 DOI: 10.5858/arpa.2023-0214-OA
Mehrvash Haghighi, Clare Bryce, John D Paulsen, Shafinaz Hussein, Brandon Veremis, Christian Salib, Roshanak Alialy, Mega Lahori, Yansheng Hao, Yuanxin Liang, Arnold Szporn, William Westra

Context.—: The diagnosis of some infectious diseases requires their identification in tissue specimens. As institutions adopt digital pathology for primary diagnosis, the limits of microorganism detection from digital images must be delineated.

Objective.—: To assess the reliability of microorganism detection from digitized images of histochemical and immunohistochemical stains commonly used in pathology.

Design.—: Original glass slides from 620 surgical pathology cases evaluated for the presence of infectious microorganisms were digitized. Immunohistochemical stains included those for herpes simplex virus (n = 100), cytomegalovirus (n = 100), Helicobacter pylori (n = 100), and spirochetes (n = 80). Histochemical stains included mucicarmine for Cryptococcus spp (n = 20), Grocott methenamine silver for fungi (n = 100), Giemsa for H pylori (n = 100), and Ziehl-Neelsen for acid-fast bacilli (n = 20). The original diagnosis based on the glass slides was regarded as the reference standard. Six pathologists reviewed the digital images.

Results.—: Digital review was generally associated with high (ie, ≥90%) specificity and positive predictive value owing to a low percentage of false positive reads, whereas a high percentage of false negatives contributed to low sensitivity and negative predictive value for many stains. Fleiss κ showed substantial interobserver agreement in the interpretation of Grocott methenamine silver and immunostains for herpes simplex virus, H pylori, and cytomegalovirus; moderate agreement for spirochete, Ziehl-Neelsen, and mucicarmine; and poor agreement for Giemsa.

Conclusions.—: Digital immunohistochemistry generally outperforms histochemical stains for microorganism detection. Digital interpretation of Ziehl-Neelsen and mucicarmine stains is associated with low scores for interrater reliability, accuracy, sensitivity, and negative predictive value such that it should not substitute for conventional review of glass slides.

背景某些传染病的诊断需要从组织标本中进行鉴定。随着机构采用数字病理学进行初级诊断,必须明确从数字图像中检测微生物的局限性:评估从病理学常用组织化学和免疫组化染色的数字化图像中检测微生物的可靠性:对 620 例手术病理病例的原始玻璃切片进行数字化处理,以评估是否存在感染性微生物。免疫组化染色包括单纯疱疹病毒(100 例)、巨细胞病毒(100 例)、幽门螺旋杆菌(100 例)和螺旋体(80 例)。组织化学染色包括隐球菌的粘菌素染色(n = 20)、真菌的 Grocott methenamine silver 染色(n = 100)、幽门螺杆菌的 Giemsa 染色(n = 100)和耐酸杆菌的 Ziehl-Neelsen 染色(n = 20)。基于玻璃切片的原始诊断被视为参考标准。六位病理学家对数字图像进行了审查:由于假阳性读数的比例较低,数字复核通常具有较高的特异性(即≥90%)和阳性预测值,而高比例的假阴性则导致许多染色的敏感性和阴性预测值较低。弗莱斯κ显示,在解读Grocott甲氰咪胍银和单纯疱疹病毒、幽门螺杆菌和巨细胞病毒免疫印迹时,观察者之间的一致性很高;在解读螺旋体、齐氏-奈尔森和粘液胭脂红时,一致性一般;在解读Giemsa时,一致性较差:结论:在微生物检测方面,数字免疫组化通常优于组织化学染色。Ziehl-Neelsen和粘液armine染色的数字化判读在相互之间的可靠性、准确性、灵敏度和阴性预测值方面得分较低,因此不应取代玻璃切片的传统检查。
{"title":"Digital Pathology in the Detection of Infectious Microorganisms: An Evaluation of Its Strengths and Weaknesses Across a Panel of Immunohistochemical and Histochemical Stains Routinely Used in Diagnostic Surgical Pathology.","authors":"Mehrvash Haghighi, Clare Bryce, John D Paulsen, Shafinaz Hussein, Brandon Veremis, Christian Salib, Roshanak Alialy, Mega Lahori, Yansheng Hao, Yuanxin Liang, Arnold Szporn, William Westra","doi":"10.5858/arpa.2023-0214-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0214-OA","url":null,"abstract":"<p><strong>Context.—: </strong>The diagnosis of some infectious diseases requires their identification in tissue specimens. As institutions adopt digital pathology for primary diagnosis, the limits of microorganism detection from digital images must be delineated.</p><p><strong>Objective.—: </strong>To assess the reliability of microorganism detection from digitized images of histochemical and immunohistochemical stains commonly used in pathology.</p><p><strong>Design.—: </strong>Original glass slides from 620 surgical pathology cases evaluated for the presence of infectious microorganisms were digitized. Immunohistochemical stains included those for herpes simplex virus (n = 100), cytomegalovirus (n = 100), Helicobacter pylori (n = 100), and spirochetes (n = 80). Histochemical stains included mucicarmine for Cryptococcus spp (n = 20), Grocott methenamine silver for fungi (n = 100), Giemsa for H pylori (n = 100), and Ziehl-Neelsen for acid-fast bacilli (n = 20). The original diagnosis based on the glass slides was regarded as the reference standard. Six pathologists reviewed the digital images.</p><p><strong>Results.—: </strong>Digital review was generally associated with high (ie, ≥90%) specificity and positive predictive value owing to a low percentage of false positive reads, whereas a high percentage of false negatives contributed to low sensitivity and negative predictive value for many stains. Fleiss κ showed substantial interobserver agreement in the interpretation of Grocott methenamine silver and immunostains for herpes simplex virus, H pylori, and cytomegalovirus; moderate agreement for spirochete, Ziehl-Neelsen, and mucicarmine; and poor agreement for Giemsa.</p><p><strong>Conclusions.—: </strong>Digital immunohistochemistry generally outperforms histochemical stains for microorganism detection. Digital interpretation of Ziehl-Neelsen and mucicarmine stains is associated with low scores for interrater reliability, accuracy, sensitivity, and negative predictive value such that it should not substitute for conventional review of glass slides.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139934639","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Clot Waveform Analysis: From Hypercoagulability to Hypocoagulability - A Review. 血块波形分析:从高凝状态到低凝状态 - 综述。
Pub Date : 2024-02-20 DOI: 10.5858/arpa.2023-0453-RA
Francesco Marongiu, Maria Filomena Ruberto, Silvia Marongiu, Doris Barcellona

Context.—: Prothrombin time (PT) and activated partial thromboplastin time (aPTT) are coagulative screening tests used for the diagnosis of several pathologic conditions, such as liver failure, coagulation factor deficiencies, anti-phospholipid antibodies (lupus anticoagulant), and factor VIII inhibitors. A new test was developed several years ago to detect the amount of thrombin generated during plasma clotting, using low tissue factor concentrations and fluorogenic substrates, and it has since been used successfully in conditions ranging from hypocoagulable to hypercoagulable states. However, the test is expensive and difficult to perform in nonspecialized laboratories, and efforts have thus been made to find an economic and easily implementable test suitable for routine use, even in nonspecialist laboratories.

Objective.—: To evaluate clot waveform analysis (CWA) of PT and aPTT, aiming to show the dynamics of clot formation; that is, the "hidden" features of both tests. CWA can be implemented by using an automated coagulometer with dedicated software. The aim of this review was to evaluate whether CWA is able to detect both hypercoagulative and hypocoagulative states.

Data sources.—: Using MedLine, we searched and retrieved articles relating to CWA. We only considered articles published in English, but with no limits in terms of article type, publication year, or geography.

Conclusions.—: CWA was shown to be a reliable test in patients with both hypercoagulable and hypocoagulable states. It represents a simple and inexpensive global test that can easily provide information on the behavior of the coagulation system. Both the first and second derivatives are computed by using dedicated software implemented with an on-board algorithm in a routine automated coagulometer.

背景凝血酶原时间(PT)和活化部分凝血活酶时间(aPTT)是用于诊断肝功能衰竭、凝血因子缺乏、抗磷脂抗体(狼疮抗凝物)和第八因子抑制剂等多种病症的凝血筛选试验。几年前开发出了一种新的检测方法,利用低浓度组织因子和含氟底物来检测血浆凝固过程中凝血酶的生成量。然而,这种检测方法既昂贵又难以在非专业实验室中进行,因此,人们一直在努力寻找一种既经济又易于实施的检测方法,以适合常规使用,甚至在非专业实验室中使用:评估 PT 和 aPTT 的血块波形分析(CWA),旨在显示血块形成的动态变化,即这两项检验的 "隐藏 "特征。CWA 可通过使用配有专用软件的自动凝血仪来实现。本综述旨在评估 CWA 是否能够检测高凝状态和低凝状态:我们使用 MedLine 搜索并检索了与 CWA 相关的文章。我们只考虑以英文发表的文章,但对文章类型、发表年份或地域没有限制:CWA对高凝状态和低凝状态的患者都是一种可靠的检测方法。它是一种简单、廉价的全面检测方法,可轻松提供有关凝血系统行为的信息。一阶导数和二阶导数都是通过在常规自动凝血仪中使用板载算法实施的专用软件计算得出的。
{"title":"Clot Waveform Analysis: From Hypercoagulability to Hypocoagulability - A Review.","authors":"Francesco Marongiu, Maria Filomena Ruberto, Silvia Marongiu, Doris Barcellona","doi":"10.5858/arpa.2023-0453-RA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0453-RA","url":null,"abstract":"<p><strong>Context.—: </strong>Prothrombin time (PT) and activated partial thromboplastin time (aPTT) are coagulative screening tests used for the diagnosis of several pathologic conditions, such as liver failure, coagulation factor deficiencies, anti-phospholipid antibodies (lupus anticoagulant), and factor VIII inhibitors. A new test was developed several years ago to detect the amount of thrombin generated during plasma clotting, using low tissue factor concentrations and fluorogenic substrates, and it has since been used successfully in conditions ranging from hypocoagulable to hypercoagulable states. However, the test is expensive and difficult to perform in nonspecialized laboratories, and efforts have thus been made to find an economic and easily implementable test suitable for routine use, even in nonspecialist laboratories.</p><p><strong>Objective.—: </strong>To evaluate clot waveform analysis (CWA) of PT and aPTT, aiming to show the dynamics of clot formation; that is, the \"hidden\" features of both tests. CWA can be implemented by using an automated coagulometer with dedicated software. The aim of this review was to evaluate whether CWA is able to detect both hypercoagulative and hypocoagulative states.</p><p><strong>Data sources.—: </strong>Using MedLine, we searched and retrieved articles relating to CWA. We only considered articles published in English, but with no limits in terms of article type, publication year, or geography.</p><p><strong>Conclusions.—: </strong>CWA was shown to be a reliable test in patients with both hypercoagulable and hypocoagulable states. It represents a simple and inexpensive global test that can easily provide information on the behavior of the coagulation system. Both the first and second derivatives are computed by using dedicated software implemented with an on-board algorithm in a routine automated coagulometer.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139907122","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Journey to Improve the College of American Pathologists Cancer Biomarker Reporting Protocols. 美国病理学家学会癌症生物标记物报告规程的改进之旅。
Pub Date : 2024-02-20 DOI: 10.5858/arpa.2023-0235-CP
Brett Baskovich, Alexander Baras, Raja R Seethala, Patrick L Fitzgibbons, Frank Schneider, Brent T Harris, Joseph Khoury

Context.—: Biomarker reporting has increasingly become a key component of pathology reporting, providing diagnostic, prognostic, and actionable therapeutic data for patient care.

Objective.—: To expand and improve the College of American Pathologists (CAP) biomarker protocols.

Design.—: We surveyed CAP members to better understand the limitations they experienced when reporting cancer biomarker results. A Biomarker Workgroup reviewed the survey results and developed a strategy to improve and standardize biomarker reporting. Drafts of new and revised biomarker protocols were reviewed in both print and electronic template formats during interactive webinars presented to the CAP House of Delegates. Feedback was collected, and appropriate revisions were made to finalize the protocols.

Results.—: The first phase of the CAP Biomarker Workgroup saw the development of (1) a new stand-alone general Immunohistochemistry Biomarker Protocol that includes reporting for ER (estrogen receptor), PR (progesterone receptor), Ki-67, HER2 (human epidermal growth factor receptor 2), PD-L1 (programmed death ligand-1), and mismatch repair; (2) a new Head and Neck Biomarker Protocol that updates the prior 2017 paper-only version into an electronic template, adding new diagnostic and theranostic markers; (3) a major revision to the Lung Biomarker Protocol to streamline it and add in pan-cancer markers; and (4) a revision to the Colon and Rectum Biomarker Protocol to add HER2 reporting.

Conclusions.—: We have taken a multipronged approach to improving biomarker reporting in the CAP cancer protocols. We continue to review current biomarker reporting protocols to reduce and eliminate unnecessary methodologic details and update with new markers as needed. The biomarker templates will serve as standardized modular units that can be inserted into cancer-reporting protocols.

背景生物标记物报告已日益成为病理报告的关键组成部分,为患者护理提供诊断、预后和可操作的治疗数据:扩展并改进美国病理学家学会(CAP)生物标记物协议:我们对 CAP 成员进行了调查,以更好地了解他们在报告癌症生物标记物结果时遇到的限制。一个生物标记物工作组对调查结果进行了审查,并制定了改进和规范生物标记物报告的策略。在提交给 CAP 代表大会的互动式网络研讨会上,以印刷和电子模板的形式对新的和修订的生物标记物协议草案进行了审查。收集了反馈意见,并进行了适当的修订,最终确定了协议:CAP 生物标志物工作组第一阶段的工作包括:(1)制定新的独立的普通免疫组化生物标志物方案,其中包括报告 ER(雌激素受体)、PR(孕酮受体)、Ki-67、HER2(人表皮生长因子受体 2)、PD-L1(程序性死亡配体-1)和错配修复;(2) 新的《头颈部生物标记物协议》将 2017 年之前的纸质版更新为电子模板,增加了新的诊断和治疗标记物;(3) 对《肺部生物标记物协议》进行了重大修订,以简化该协议并增加泛癌症标记物;(4) 修订了《结肠和直肠生物标记物协议》,增加了 HER2 报告。结论我们采取了多管齐下的方法来改进 CAP 癌症方案中的生物标记物报告。我们将继续审查当前的生物标记物报告规程,以减少和消除不必要的方法细节,并根据需要更新新的标记物。生物标记物模板将作为标准化模块单元,可插入癌症报告规程中。
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引用次数: 0
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Archives of pathology & laboratory medicine
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