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Clinicopathologic and Molecular Characterization of High-Risk Human Papillomavirus-Positive Carcinomas of the Urinary Tract. 高危人类乳头状瘤病毒阳性尿路癌的临床病理学和分子特征描述
Pub Date : 2024-04-01 DOI: 10.5858/arpa.2023-0285-OA
Neslihan Kayraklioglu, Bradley A Stohr, Emily Chan

Context.—: Human papillomavirus (HPV) is a well-known cause of squamous cell carcinomas of anogenital and oropharyngeal regions, where treatment strategies and prognosis depend on HPV status. The significance of HPV status in tumors arising along the urinary tract is not well established.

Objective.—: To provide detailed clinical, morphologic, immunohistochemical, and molecular analysis of HPV+ urinary tract carcinomas (UTCs).

Design.—: We identified and retrospectively examined 12 HPV+ UTCs, confirmed by high-risk HPV in situ hybridization.

Results.—: The HPV+ UTCs originated from the urethra (9) and urinary bladder (3); 5 of 12 (42%) presented with nodal metastasis. On morphology, HPV+ UTCs were predominantly basaloid; well-differentiated squamous areas were focally seen. Available immunohistochemistry (IHC) showed strong staining for p16 (11 of 11), p63 (12 of 12), cytokeratin (CK) 903 (11 of 11), and CK5/6 (11 of 11); variable staining for GATA3 (8 of 12) and CK7 (4 of 11); and rare uroplakin II staining (1 of 12). Molecular analysis revealed the most frequently altered genes: KMT2C (42%), PIK3CA (42%), and KMT2D (25%). In contrast to published conventional urothelial and squamous cell carcinoma molecular data, TERTp mutation was rare (8%), and no TP53 or CDKN2A aberrations were identified. During available follow-up (11 of 12; median, 39 months), 6 patients required treatment for recurrence; ultimately, 1 died of disease, 2 were alive with disease, and 8 had no evidence of disease. Finally, we provide 11 HPV- squamous predominant UTCs for IHC and molecular comparisons; notably, a subset of HPV- UTCs was positive for p16 IHC (27%), making p16 IHC a less-specific surrogate marker for HPV status at this site.

Conclusions.—: HPV+ UTCs show distinct clinical, morphologic, and molecular characteristics, suggesting important roles for HPV in UTC.

背景:人乳头瘤病毒(HPV)是导致肛门生殖器和口咽部鳞状细胞癌的一个众所周知的原因,其治疗策略和预后取决于HPV状态。在泌尿道肿瘤中,HPV 状态的重要性尚未得到很好的证实:对HPV+尿路癌(UTC)进行详细的临床、形态学、免疫组化和分子分析:我们发现并回顾性检查了12例经高危HPV原位杂交证实的HPV+ UTC:HPV+UTC来自尿道(9例)和膀胱(3例);12例中有5例(42%)出现结节转移。从形态上看,HPV+ UTC 主要呈基底样;局部可见分化良好的鳞状区。免疫组化(IHC)显示,p16(11 例中的 11 例)、p63(12 例中的 12 例)、细胞角蛋白(CK)903(11 例中的 11 例)和 CK5/6 (11 例中的 11 例)染色较强;GATA3(12 例中的 8 例)和 CK7(11 例中的 4 例)染色不一;尿棘蛋白 II 染色罕见(12 例中的 1 例)。分子分析显示了最常发生改变的基因:KMT2C(42%)、PIK3CA(42%)和KMT2D(25%)。与已发表的常规尿路上皮癌和鳞状细胞癌分子数据相比,TERTp基因突变很少见(8%),也未发现TP53或CDKN2A基因畸变。在现有的随访期间(12 例中有 11 例;中位数为 39 个月),6 例患者因复发而需要治疗;最终,1 例患者死于疾病,2 例患者带病生存,8 例患者无疾病证据。最后,我们提供了11例HPV-鳞状占优势的UTC进行IHC和分子比较;值得注意的是,一部分HPV-UTC的p16 IHC呈阳性(27%),这使得p16 IHC成为该部位HPV状态的特异性较低的替代标记物:HPV+UTC显示出不同的临床、形态和分子特征,表明HPV在UTC中发挥着重要作用。
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引用次数: 0
Perivascular Epithelioid Cell-Family Tumors in Children, Adolescents and Young Adults:Clinicopathologic Features in 70 Cases. 儿童、青少年和年轻人中的血管周围上皮样细胞家族肿瘤:70 例病例的临床病理特征。
Pub Date : 2024-03-29 DOI: 10.5858/arpa.2023-0552-OA
Phoebe M Hammer, Angus Toland, Muhammad Shaheen, Archana Shenoy, Ashwini Esnakula, M John Hicks, Mikako Warran, Alyaa Al-Ibraheemi, Jessica L Davis, Serena Y Tan

Context.—: Perivascular epithelioid cell tumors (PEComas) are rare mesenchymal tumors of uncertain histogenesis expressing smooth muscle and melanocytic markers. The clinicopathologic spectrum in young patients is not well documented.

Objective.—: To describe a multi-institutional series of PEComas in children, adolescents, and young adults.

Design.—: PEComas, not otherwise specified (NOS); angiomyolipomas (AMLs); lymphangioleiomyomatosis; and clear cell sugar tumors were retrospectively identified from 6 institutions and authors' files.

Results.—: Seventy PEComas in 64 patients (median age, 15 years) were identified. They were more common in females (45 of 64 patients), occurring predominately in kidney (53 of 70), followed by liver (6 of 70). Thirty-four patients had confirmed tuberous sclerosis complex (TSC), 3 suspected TSC mosaicism, 2 Li-Fraumeni syndrome (LFS) and 1 neurofibromatosis type 1. Most common variants were classic (49 of 70) and epithelioid (8 of 70) AML. Among patients with AMLs, most (34 of 47) had TSC, and more TSC patients had multiple AMLs (15 of 36) than non-TSC patients (2 of 13). Two TSC patients developed malignant transformation of classic AMLs: 1 angiosarcomatous and 1 malignant epithelioid. Lymphangioleiomyomatosis (5 of 70) occurred in females only, usually in the TSC context (4 of 5). PEComas-NOS (6 of 70) occurred exclusively in non-TSC patients, 2 of whom had LFS (2 of 6). Three were malignant, 1 had uncertain malignant potential, and 2 were benign. All 4 PEComas-NOS in non-LFS patients had TFE3 rearrangements.

Conclusions.—: Compared to the general population, TSC was more prevalent in our cohort; PEComas-NOS showed more frequent TFE3 rearrangements and possible association with LFS. This series expands the spectrum of PEComas in young patients and demonstrates molecular features and germline contexts that set them apart from older patients.

背景血管周围上皮样细胞瘤(PEComas)是一种罕见的间叶肿瘤,组织发生机制不明确,表达平滑肌和黑素细胞标记。其在年轻患者中的临床病理范围尚未得到很好的记录:描述儿童、青少年和年轻成人PEComas的多机构系列病例:从 6 家机构和作者的档案中回顾性地确定了未注明的 PEComas、血管肌脂肪瘤 (AML)、淋巴管瘤病和透明细胞糖瘤:64名患者(中位年龄15岁)中有70例PEC瘤。这些肿瘤多见于女性(64 例患者中有 45 例),主要发生在肾脏(70 例患者中有 53 例),其次是肝脏(70 例患者中有 6 例)。34例患者确诊为结节性硬化综合征(TSC),3例疑似TSC嵌合,2例为李-弗劳米尼综合征(LFS),1例为神经纤维瘤病1型。最常见的变异型是典型急性髓细胞性白血病(70 例中有 49 例)和上皮样白血病(70 例中有 8 例)。在患有急性髓细胞性白血病的患者中,大多数(47例中的34例)患有TSC,而患有多发性急性髓细胞性白血病的TSC患者(36例中的15例)多于非TSC患者(13例中的2例)。两名TSC患者发生了典型急性髓细胞性白血病的恶性转化:1例为血管肉瘤型,1例为恶性上皮样型。淋巴管瘤病(70例中的5例)仅发生在女性患者中,通常是在TSC背景下发生(5例中的4例)。PEComas-NOS(70 例中有 6 例)仅发生在非 TSC 患者中,其中 2 例有 LFS(6 例中有 2 例)。其中 3 例为恶性,1 例恶性可能性不确定,2 例为良性。非LFS患者的4例PEComas-NOS均有TFE3重排:结论:与普通人群相比,TSC在我们的队列中发病率更高;PEComas-NOS显示出更频繁的TFE3重排,并可能与LFS有关。该系列病例扩大了年轻患者PEComas的范围,并显示了有别于老年患者的分子特征和种系背景。
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引用次数: 0
Continued Positive Job Search Experience for New Pathologists Seeking First Employment During the COVID-19 Pandemic (2020-2022). COVID-19 大流行期间(2020-2022 年)新病理学家首次求职的持续积极求职体验。
Pub Date : 2024-03-26 DOI: 10.5858/arpa.2023-0408-CP
Julie Katz Karp, Amanda Lofgreen, Kristen Johnson, Melissa R George, Stephanie Barak, Bronwyn H Bryant, Mary P Berg, John M Childs, Barbara E C Knollman-Ritschel, Victor G Prieto, Kristie L White, Cindy B McCloskey

Context.—: As pathologists retire and leave the field, it is critical to accurately capture employment trends for new-in-practice pathologists. There is always interest in the job market for newly graduated pathology trainees and prospective pathology trainees, but it is unclear how the COVID-19 pandemic may have affected the job search experience.

Objective.—: To provide an update on trends gleaned from a survey of pathology graduates' job search experiences during the COVID-19 pandemic.

Design.—: We analyzed data from an annual job search survey sent by the College of American Pathologists Graduate Medical Education Committee between 2020 and 2022 to College of American Pathologists junior members and fellows in practice 3 years or less actively looking for a nonfellowship position. Various indicators of the job search experience were compared year to year and with the data previously published 2017 to 2019 and 2012 to 2016.

Results.—: Analysis revealed continued positive trends between the 2020 to 2022 data and the data from 2017 to 2019 and 2012 to 2016. This includes continued ease in finding positions, continued availability of jobs in the subspecialty of choice, continued satisfaction with the positions accepted, and, notably, higher starting salaries.

Conclusions.—: Despite the many challenges of the COVID-19 pandemic, job market trends for newly graduated pathology trainees continue to be favorable with respect to multiple indicators compared with 2 prior periods, 2017 to 2019 and 2012 to 2016.

背景:随着病理学家的退休和离职,准确把握新入职病理学家的就业趋势至关重要。刚毕业的病理实习生和未来的病理实习生总是对就业市场很感兴趣,但 COVID-19 大流行对他们的求职经历有何影响尚不清楚:提供从 COVID-19 大流行期间病理学毕业生求职经历调查中收集到的最新趋势:我们分析了美国病理学家学院毕业医学教育委员会在 2020 年至 2022 年期间向美国病理学家学院初级会员和执业 3 年或更短时间内积极寻找非研究员职位的研究员发出的年度求职调查中的数据。对求职经历的各种指标进行了逐年比较,并与之前公布的2017年至2019年和2012年至2016年的数据进行了比较:分析显示,2020 年至 2022 年的数据与 2017 年至 2019 年和 2012 年至 2016 年的数据之间继续保持积极趋势。这包括继续容易找到职位、继续有机会获得所选亚专科的工作、继续对所接受的职位感到满意,尤其是起薪更高:尽管 COVID-19 大流行带来了许多挑战,但与之前的两个时期(2017 年至 2019 年和 2012 年至 2016 年)相比,新毕业的病理学受训者在多个指标方面的就业市场趋势仍然良好。
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引用次数: 0
Nonspecificity of Immunohistochemistry for Mycobacteria Species Using a Rabbit Polyclonal Antibody. 用兔多克隆抗体进行分枝杆菌免疫组化的非特异性分析
Pub Date : 2024-03-21 DOI: 10.5858/arpa.2023-0412-OA
Justin T Kelley, Lauren Kroll-Wheeler, Steven Hrycaj, May P Chan, Jerome Cheng, Laura W Lamps

Context.—: Recent publications have featured immunohistochemistry (IHC) as a sensitive tool for detecting Mycobacterium tuberculosis and nontuberculous mycobacteria, but performance is limited to cases suspected to have mycobacterial infection.

Objective.—: To examine cross-reactivity of a polyclonal antimycobacterial antibody with various types of pathogens, tissues, and inflammatory patterns.

Design.—: Surgical pathology files during a period of 6 years were searched, and 40 cases representing a variety of pathogens, tissue types, and inflammatory responses were retrieved. Cases were stained with a rabbit polyclonal antimycobacterial antibody (Biocare Medical, Pacheco, California). The cases and associated histochemical stains, culture, and molecular results were reviewed by 3 pathologists.

Results.—: All 8 cases of mycobacterial infection previously diagnosed by other methods were positive for mycobacteria by IHC. In addition, multiple bacterial and fungal organisms and 1 case of Leishmania amastigotes were also immunoreactive with the mycobacterial IHC.

Conclusions.—: Although highly sensitive for mycobacteria, the polyclonal antibody shows significant cross-reactivity with other organisms. This is a sensitive but nonspecific stain that can be used as an alternative confirmation method for mycobacteria, but attention should be paid to inflammatory reaction and organism morphology when IHC is positive to avoid misdiagnosis.

背景最近发表的文章指出,免疫组化(IHC)是检测结核分枝杆菌和非结核分枝杆菌的灵敏工具,但其作用仅限于怀疑有分枝杆菌感染的病例:研究多克隆抗分支杆菌抗体与各种病原体、组织和炎症模式的交叉反应:搜索了 6 年间的手术病理档案,并检索了 40 个病例,这些病例代表了各种病原体、组织类型和炎症反应。用兔多克隆抗霉菌抗体(Biocare Medical,加利福尼亚州帕切科)对病例进行染色。病例及相关的组织化学染色、培养和分子检测结果由 3 位病理学家共同审核:结果:以前用其他方法确诊的 8 例分枝杆菌感染病例在 IHC 检测中均呈阳性。此外,多种细菌和真菌以及 1 例利什曼原虫也对分枝杆菌 IHC 呈免疫反应:结论:虽然多克隆抗体对分枝杆菌高度敏感,但与其他生物也有明显的交叉反应。这是一种敏感但非特异性的染色法,可作为分枝杆菌的替代确证方法,但当 IHC 呈阳性时应注意炎症反应和生物体形态,以避免误诊。
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引用次数: 0
Uncommon Tumors of the Lung: Recently Described and Rediscovered Tumors. 肺部不常见肿瘤:最近描述和重新发现的肿瘤。
Pub Date : 2024-03-15 DOI: 10.5858/arpa.2023-0414-RA
Cesar A Moran

Context.—: The great majority of primary pulmonary neoplasms are represented by non-small cell carcinomas-adenocarcinoma and squamous cell carcinoma. In addition, there is another group of neoplasms such as those of neuroendocrine origin that also represent a meaningful subset of primary lung neoplasms. Basically, any other tumor that is not in these groups of tumors may represent an unusual lung neoplasm.

Objective.—: To highlight more recently described unusual tumoral entities that may represent a challenge in diagnosis and that require awareness of their existence.

Data sources.—: This is a review of 3 different entities: bronchiolar adenoma, adenofibroma, and hemangioblastoma-like clear cell stromal tumor. These tumoral conditions are rare, and a review of the literature is presented. The most relevant morphologic, immunohistochemical, and molecular aspects of bronchiolar adenoma, adenofibroma, and hemangioblastoma-like clear cell stromal tumor are presented. The difficulty of arriving at an unequivocal diagnosis in small biopsies is highlighted.

Conclusions.—: The 3 entities represent uncommon tumors occurring primarily in the lung and a diagnostic challenge not only in biopsy specimens but also often in surgically resected specimens. The use of immunohistochemical stains and in some cases of molecular diagnostics is of aid in arriving at final interpretation.

背景:绝大多数原发性肺肿瘤是非小细胞癌-腺癌和鳞状细胞癌。此外,还有一类肿瘤,如神经内分泌来源的肿瘤,也是原发性肺肿瘤的重要组成部分。基本上,任何不属于这几类肿瘤的其他肿瘤都可能是不常见的肺肿瘤:强调最近描述的更多异常肿瘤实体,这些实体可能是诊断中的一个挑战,需要认识到它们的存在:这是一篇关于3种不同实体的综述:支气管腺瘤、腺纤维瘤和血管母细胞瘤样透明细胞间质瘤。这些肿瘤非常罕见,本文对相关文献进行了综述。文中介绍了支气管腺瘤、腺纤维瘤和血管母细胞瘤样透明细胞间质瘤最相关的形态学、免疫组化和分子方面的内容。结论:这三个实体是主要发生在肺部的不常见肿瘤,不仅是活检标本的诊断难题,也常常是手术切除标本的诊断难题。使用免疫组化染色法以及在某些情况下使用分子诊断法有助于做出最终解释。
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引用次数: 0
Steroidogenic Acute Regulatory Protein Is a Useful Marker for Sex-Cord-Stroma Tumors and Normal and Neoplastic Adrenocortical Tissue. 类固醇生成急性调节蛋白是性索-瘤、正常和肿瘤性肾上腺皮质组织的有用标记物
Pub Date : 2024-03-15 DOI: 10.5858/arpa.2023-0281-OA
Maximilian Lennartz, Daniela Amezada, Doris Höflmayer, Sebastian Dwertmann Rico, Clara von Bargen, Simon Kind, Viktor Reiswich, Florian Viehweger, Florian Lutz, Veit Bertram, Christoph Fraune, Natalia Gorbokon, Sören Weidemann, Claudia Hube-Magg, Anne Menz, Ria Uhlig, Till Krech, Andrea Hinsch, Eike Burandt, Guido Sauter, Ronald Simon, Martina Kluth, Andreas H Marx, Patrick Lebok, David Dum, Sarah Minner, Frank Jacobsen, Till S Clauditz, Christian Bernreuther, Stefan Steurer

Context.—: Steroidogenic acute regulatory (StAR) protein is a mitochondrial transport protein with a critical regulatory role for steroid hormone production. The tissue distribution of StAR expression is limited to few human normal tissues.

Objective.—: To assess the diagnostic and prognostic value of StAR immunohistochemistry analysis.

Design.—: A tissue microarray containing 19 202 samples from 152 different tumor types and subtypes and 608 samples of 76 different normal tissue types was analyzed by immunohistochemistry.

Result.—: StAR immunostaining occurred in 198 (1.2%) of the 17 135 analyzable tumors. StAR expression was observed in 27 of 152 tumor categories, 9 of which included at least 1 strongly positive case. The highest rate of StAR positivity occurred in Leydig cell tumors of the testis and the ovary (100%), steroid cell tumors of the ovary (100%), adrenocortical carcinomas (93%) and adenomas (87%), Sertoli-Leydig cell tumors (67%) and granulosa cell tumors of the ovary (56%), as well as seminomas (7%). Nineteen other tumor entities showed-a usually weak-StAR positivity in less than 6% of cases. A comparison with preexisting Melan-A (a melanocyte antigen) data revealed that StAR was more often positive in adrenocortical neoplasms and in Leydig cell tumors while StAR (but not Melan-A) was negative in Sertoli cell tumors.

Conclusions.—: Our data provide a comprehensive overview on the patterns of StAR immunostaining in human tumors and suggest a diagnostic utility of StAR immunohistochemistry for supporting a diagnosis of Leydig cell tumors or of normal or neoplastic adrenocortical tissue.

背景类固醇生成急性调节蛋白(StAR)是一种线粒体转运蛋白,对类固醇激素的生成具有重要的调节作用。StAR 的组织分布仅限于少数人体正常组织:评估 StAR 免疫组化分析的诊断和预后价值:通过免疫组化方法分析了包含152种不同肿瘤类型和亚型的19 202个样本以及76种不同正常组织类型的608个样本的组织芯片:在 17 135 个可分析的肿瘤中,有 198 个(1.2%)出现了 StAR 免疫染色。在 152 个肿瘤类别中有 27 个观察到了 StAR 表达,其中 9 个至少有一个强阳性病例。StAR阳性率最高的是睾丸和卵巢的Leydig细胞肿瘤(100%)、卵巢的类固醇细胞肿瘤(100%)、肾上腺皮质癌(93%)和腺瘤(87%)、Sertoli-Leydig细胞肿瘤(67%)和卵巢的颗粒细胞肿瘤(56%)以及精原细胞瘤(7%)。其他 19 个肿瘤实体的 STAR 阳性率通常较低,不足 6%。与之前已有的 Melan-A(一种黑色素细胞抗原)数据进行比较后发现,肾上腺皮质肿瘤和雷迪格细胞肿瘤中的 StAR 通常呈阳性,而 Sertoli 细胞肿瘤中的 StAR(而非 Melan-A)呈阴性:我们的数据提供了人类肿瘤中 StAR 免疫染色模式的全面概述,并表明 StAR 免疫组化在辅助诊断 Leydig 细胞肿瘤或正常或肿瘤性肾上腺皮质组织方面具有诊断作用。
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引用次数: 0
The Spectrum of Fusions Occurring in Non-Smooth Muscle Mesenchymal Uterine Tumors: A Review of the Current Knowledge. 非平滑肌间质子宫肿瘤的融合谱:当前知识综述。
Pub Date : 2024-03-15 DOI: 10.5858/arpa.2023-0324-RA
Pavel Dundr, Radoslav Matěj, Jan Hojný, Nikola Hájková, Kristýna Němejcová, Michaela Kendall Bártů

Context.—: Non-smooth muscle uterine sarcomas are mostly represented by low-grade endometrial stromal sarcoma. However, several other rare, distinct types of uterine sarcoma are recognized, including high-grade endometrial stromal sarcoma, tumors with kinase fusions, uterine tumors resembling ovarian sex cord tumors, soft tissue-type sarcoma, and emerging entities such as KAT6A/B-rearranged tumors. The landscape of uterine sarcomas has changed, mostly because of the increasing knowledge concerning their molecular aberrations.

Objective.—: To offer a comprehensive review of the literature focusing on fusions occurring in other than smooth muscle mesenchymal uterine tumors with respect to their type, frequency, and overlap between diagnostic categories and entities.

Data sources.—: The data were mined from the PubMed/MEDLINE database covering the time period from January 1988 to June 2023. In total, 156 studies focusing on the problematics of fusions occurring in non-smooth muscle mesenchymal uterine tumors were selected, and thus became the basis for this review.

Conclusions.—: One hundred ten fusions were identified in 703 tumors. The diagnostic significance of the molecular aberrations occurring in these tumors can be unclear in some cases. This can be related to the rare aberrations with a limited number of reported cases. Additionally, even well-known aberrations considered as specific for a certain distinct entity can occur in more lesions, the biological behavior and clinical significance of which can differ substantially.

背景非平滑肌子宫肉瘤主要以低度子宫内膜间质肉瘤为代表。然而,其他几种罕见、独特类型的子宫肉瘤也已得到确认,包括高级别子宫内膜间质肉瘤、激酶融合肿瘤、类似卵巢性索肿瘤的子宫肿瘤、软组织型肉瘤以及 KAT6A/B 重排肿瘤等新兴实体。子宫肉瘤的面貌已经发生了变化,这主要是因为人们对其分子畸变的了解越来越多:全面综述除平滑肌间质子宫肿瘤以外发生融合的文献,重点关注其类型、频率以及诊断类别和实体之间的重叠:数据来自PubMed/MEDLINE数据库,时间跨度为1988年1月至2023年6月。总共选取了 156 项研究,这些研究关注非平滑肌间质子宫肿瘤发生融合的问题,因此成为本综述的基础:在 703 例肿瘤中发现了 110 例融合。在某些情况下,这些肿瘤中出现的分子畸变的诊断意义可能并不明确。这可能与报告病例数量有限的罕见畸变有关。此外,即使是众所周知的被认为是某一独特实体的特异性畸变,也可能出现在更多的病变中,其生物学行为和临床意义可能大不相同。
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引用次数: 0
A Large Postmortem Database of COVID-19 Patients Can Inform Disease Research and Public Policy Decision Making. 大型 COVID-19 患者尸检数据库可为疾病研究和公共政策决策提供信息。
Pub Date : 2024-03-08 DOI: 10.5858/arpa.2023-0380-OA
Jody E Hooper, Harry Sanchez, Silvio Litovsky, Zhen Arthur Lu, Edward W Gabrielson, Robert F Padera, Thora Steffensen, Isaac H Solomon, Andrea Gilbert, Kirsten J Threlkeld, Amy V Rapkiewicz, Holly Harper, Meghan E Kapp, Mary K Schwerdt, Sharon Mount, Yiwen Wang, Rong Lu, Alex K Williamson

Context.—: Autopsies performed on COVID-19 patients have provided critical information about SARS-CoV-2's tropism, mechanisms of tissue injury, and the spectrum of disease.

Objective.—: To provide an updated database of postmortem disease in COVID-19 patients, assess relationships among clinical and pathologic variables, evaluate the accuracy of death certification, and correlate disease variables to causes of death.

Design.—: The 272 postmortem examinations reported in this paper were submitted by 14 pathologists from 9 medical or forensic institutions across the United States. The study spans the eras of the 3 principal COVID-19 strains and incorporates surveyed demographic, clinical, and postmortem data from decedents infected with SARS-CoV-2, including primary and contributing causes of death. It is the largest database of its kind to date.

Results.—: Demographics of the decedents reported here correspond well to national statistics. Primary causes of death as determined by autopsy and official death certificates were significantly correlated. When specifically cited disease conditions found at autopsy were correlated with COVID-19 versus non-COVID-19 death, only lung findings characteristic of SARS-CoV-2 infection or the absence of lung findings were significantly associated.

Conclusions.—: Changes in hospitalization and disease likely stem from longer lifespans after COVID-19 diagnosis and alteration in treatment approaches. Although Omicron variants preferentially replicate in the upper airways, autopsied patients who died of COVID-19 in that time period showed the same lung damage as earlier decedents. Most importantly, findings suggest that there are still unelucidated risk factors for death from COVID-19 including possibly genetic susceptibility.

背景对 COVID-19 患者进行的尸检提供了有关 SARS-CoV-2 的滋养特性、组织损伤机制和疾病谱的重要信息:提供 COVID-19 患者死后疾病的最新数据库,评估临床和病理变量之间的关系,评估死亡证明的准确性,并将疾病变量与死因联系起来:本文报告的 272 例尸检结果由来自美国 9 家医疗或法医机构的 14 位病理学家提交。这项研究跨越了 COVID-19 3 种主要毒株的年代,并纳入了感染 SARS-CoV-2 的死者的人口、临床和尸检数据,包括主要死因和诱发死因。这是迄今为止同类数据库中最大的一个:这里报告的死者的人口统计学特征与国家统计数据十分吻合。尸检和官方死亡证明确定的主要死因有明显的相关性。如果将尸检时发现的具体疾病情况与 COVID-19 和非 COVID-19 死亡相关联,则只有 SARS-CoV-2 感染的肺部检查结果或无肺部检查结果与 COVID-19 有明显关联:结论:COVID-19 确诊后,患者寿命延长,治疗方法也发生了变化,这可能是住院和疾病发生变化的原因。虽然奥米克龙变异体更倾向于在上呼吸道复制,但在此期间死于 COVID-19 的尸检患者显示出与早期死者相同的肺部损伤。最重要的是,研究结果表明,COVID-19导致死亡的风险因素仍未得到阐明,其中可能包括遗传易感性。
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引用次数: 0
Association of Mutant KRAS Alleles With Morphology and Clinical Outcomes in Pancreatic Ductal Adenocarcinoma. 突变 KRAS 等位基因与胰腺导管腺癌形态学和临床结果的关系
Pub Date : 2024-03-08 DOI: 10.5858/arpa.2023-0005-OA
Timothy Chao, Zi-Xuan Wang, Wilbur B Bowne, Clifford J Yudkoff, Ava Torjani, Vishal Swaminathan, Taylor R Kavanagh, Austin Roadarmel, Cyrus J Sholevar, Shawnna Cannaday, Geoffrey Krampitz, Tingting Zhan, Eliyahu Gorgov, Avinoam Nevler, Harish Lavu, Charles J Yeo, Stephen C Peiper, Wei Jiang

Context.—: Mutant KRAS is the main oncogenic driver in pancreatic ductal adenocarcinomas (PDACs). However, the clinical and phenotypic implications of harboring different mutant KRAS alleles remain poorly understood.

Objective.—: To characterize the potential morphologic and clinical outcome differences in PDACs harboring distinct mutant KRAS alleles.

Design.—: Cohort 1 consisted of 127 primary conventional PDACs with no neoadjuvant therapy, excluding colloid/mucinous, adenosquamous, undifferentiated, and intraductal papillary mucinous neoplasm-associated carcinomas, for which an in-house 42-gene mutational panel had been performed. A morphologic classification system was devised wherein each tumor was assigned as conventional, papillary/large duct (P+LD, defined as neoplastic glands with papillary structure and/or with length ≥0.5 mm), or poorly differentiated (when the aforementioned component was 60% or more of the tumor). Cohort 2 was a cohort of 88 PDACs in The Cancer Genome Atlas, which were similarly analyzed.

Results.—: In both cohorts, there was significant enrichment of P+LD morphology in PDACs with KRAS G12V and G12R compared with G12D. In the entire combined cohort, Kaplan-Meier analyses showed longer overall survival (OS) with KRAS G12R as compared with G12D (median OS of 1255 versus 682 days, P = .03) and in patients whose PDACs displayed P+LD morphology as compared with conventional morphology (median OS of 1175 versus 684 days, P = .04). In the adjuvant-only subset, KRAS G12R had the longest OS compared with G12D, G12V, and other alleles (median OS unreached/undefined versus 1009, 1129, and 1222 days, respectively).

Conclusions.—: PDACs with different mutant KRAS alleles are associated with distinct morphologies and clinical outcomes, with KRAS G12R allele associated with P+LD morphology and longer OS when compared with G12D using Kaplan-Meier studies.

背景突变 KRAS 是胰腺导管腺癌(PDAC)的主要致癌驱动因素。然而,人们对携带不同突变 KRAS 等位基因对临床和表型的影响仍知之甚少:描述携带不同突变 KRAS 等位基因的 PDAC 的潜在形态学和临床结果差异:队列1由127例未接受新辅助治疗的原发性常规PDAC组成,不包括胶样/粘液性、腺鳞状、未分化和导管内乳头状粘液瘤相关癌,已对其进行了内部42基因突变检测。我们设计了一套形态学分类系统,将每种肿瘤分为传统型、乳头状/大导管型(P+LD,定义为具有乳头状结构和/或长度≥0.5毫米的肿瘤性腺体)或分化不良型(当上述成分占肿瘤的60%或以上时)。队列2是《癌症基因组图谱》(The Cancer Genome Atlas)中的88个PDAC队列,对其进行了类似分析:在两个队列中,与 G12D 相比,KRAS G12V 和 G12R 的 PDAC 中 P+LD 形态显著增高。在整个合并队列中,Kaplan-Meier分析显示,与G12D相比,KRAS G12R的患者总生存期(OS)更长(中位OS为1255天对682天,P = .03),与传统形态相比,PDAC显示P+LD形态的患者总生存期(OS)更长(中位OS为1175天对684天,P = .04)。在仅使用佐剂的子集中,与G12D、G12V和其他等位基因相比,KRAS G12R的OS最长(中位OS未达到/未定义与分别为1009天、1129天和1222天):KRAS G12R等位基因与P+LD形态相关,与G12D相比,KRAS G12R等位基因的Kaplan-Meier研究结果显示其OS更长。
{"title":"Association of Mutant KRAS Alleles With Morphology and Clinical Outcomes in Pancreatic Ductal Adenocarcinoma.","authors":"Timothy Chao, Zi-Xuan Wang, Wilbur B Bowne, Clifford J Yudkoff, Ava Torjani, Vishal Swaminathan, Taylor R Kavanagh, Austin Roadarmel, Cyrus J Sholevar, Shawnna Cannaday, Geoffrey Krampitz, Tingting Zhan, Eliyahu Gorgov, Avinoam Nevler, Harish Lavu, Charles J Yeo, Stephen C Peiper, Wei Jiang","doi":"10.5858/arpa.2023-0005-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0005-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Mutant KRAS is the main oncogenic driver in pancreatic ductal adenocarcinomas (PDACs). However, the clinical and phenotypic implications of harboring different mutant KRAS alleles remain poorly understood.</p><p><strong>Objective.—: </strong>To characterize the potential morphologic and clinical outcome differences in PDACs harboring distinct mutant KRAS alleles.</p><p><strong>Design.—: </strong>Cohort 1 consisted of 127 primary conventional PDACs with no neoadjuvant therapy, excluding colloid/mucinous, adenosquamous, undifferentiated, and intraductal papillary mucinous neoplasm-associated carcinomas, for which an in-house 42-gene mutational panel had been performed. A morphologic classification system was devised wherein each tumor was assigned as conventional, papillary/large duct (P+LD, defined as neoplastic glands with papillary structure and/or with length ≥0.5 mm), or poorly differentiated (when the aforementioned component was 60% or more of the tumor). Cohort 2 was a cohort of 88 PDACs in The Cancer Genome Atlas, which were similarly analyzed.</p><p><strong>Results.—: </strong>In both cohorts, there was significant enrichment of P+LD morphology in PDACs with KRAS G12V and G12R compared with G12D. In the entire combined cohort, Kaplan-Meier analyses showed longer overall survival (OS) with KRAS G12R as compared with G12D (median OS of 1255 versus 682 days, P = .03) and in patients whose PDACs displayed P+LD morphology as compared with conventional morphology (median OS of 1175 versus 684 days, P = .04). In the adjuvant-only subset, KRAS G12R had the longest OS compared with G12D, G12V, and other alleles (median OS unreached/undefined versus 1009, 1129, and 1222 days, respectively).</p><p><strong>Conclusions.—: </strong>PDACs with different mutant KRAS alleles are associated with distinct morphologies and clinical outcomes, with KRAS G12R allele associated with P+LD morphology and longer OS when compared with G12D using Kaplan-Meier studies.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-03-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140061504","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Circulating Nucleated Red Blood Cells: An Updated Reference Interval. 循环有核红细胞:最新参考区间。
Pub Date : 2024-03-04 DOI: 10.5858/arpa.2023-0328-OA
Amy A Meredith, Neil R Meredith, Lynelle Smith, Julie Rosser

Context.—: Nucleated red blood cells (nRBCs) are not identified in the peripheral blood in healthy individuals beyond the neonatal period. Their presence in children and adults is traditionally considered pathologic. Contemporary hematology analyzers measure nRBCs at very low levels compared to traditional manual morphometric methods. The original launch of the Sysmex XN analyzer in this study's clinical laboratory verified the previously used nRBC reference interval of 0.00 to 0.01 × 106/μL. However, nRBC results from apparently healthy patients were flagged as abnormal (high), subsequently causing patient anxiety and increased subspecialty referrals.

Objective.—: To determine whether current reference intervals (RIs) for nRBCs were clinically relevant.

Design.—: We performed a prospective analysis of 405 300 specimens from nonhospitalized individuals who received a complete blood count. Applying inclusion/exclusion criteria produced a total specimen pool of 66 498.

Results.—: Of the 66 498 samples with otherwise normal complete blood count results from healthy, nonhospitalized individuals, 338 showed results outside the previously established RI; 336 of 66 498 (0.5%) had nRBC results greater than 0.01 × 106/μL. Two samples had nRBC values greater than 0.10 ×106/μL.

Conclusions.—: Based on statistical analysis of our results, we concluded that the upper limit of the RI could be updated from 0.01 × 106/μL to 0.10 × 106/μL. Increasing the upper limit of normal for the nRBC RI should decrease patient consternation from an abnormal laboratory value and significantly decrease costs through reducing unnecessary follow up care, and without causing patient harm.

背景有核红细胞(nRBCs)在新生儿期以后的健康人外周血中就无法识别了。在儿童和成人中出现有核红细胞传统上被认为是病态的。与传统的人工形态测量方法相比,现代血液分析仪测量的 nRBC 含量非常低。本研究的临床实验室最初使用的 Sysmex XN 分析仪验证了以前使用的 nRBC 参考区间为 0.00 至 0.01 × 106/μL。然而,表面上健康的患者的 nRBC 结果却被标记为异常(偏高),从而引起了患者的焦虑和亚专科转诊的增加:确定目前 nRBC 的参考区间 (RI) 是否与临床相关:我们对 405 300 份接受全血细胞计数的非住院患者标本进行了前瞻性分析。根据纳入/排除标准,样本库中共有 66 498 份样本:在 66 498 份全血计数结果正常的健康非住院患者样本中,有 338 份样本的结果超出了之前确定的 RI;66 498 份样本中有 336 份样本(0.5%)的 nRBC 结果大于 0.01 × 106/μL。两个样本的 nRBC 值大于 0.10 ×106/μL :根据对结果的统计分析,我们得出结论:RI 的上限可从 0.01 × 106/μL 提高到 0.10 × 106/μL。提高 nRBC RI 的正常上限应能减少患者因实验室数值异常而产生的不安,并通过减少不必要的随访护理而显著降低成本,同时不会对患者造成伤害。
{"title":"Circulating Nucleated Red Blood Cells: An Updated Reference Interval.","authors":"Amy A Meredith, Neil R Meredith, Lynelle Smith, Julie Rosser","doi":"10.5858/arpa.2023-0328-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0328-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Nucleated red blood cells (nRBCs) are not identified in the peripheral blood in healthy individuals beyond the neonatal period. Their presence in children and adults is traditionally considered pathologic. Contemporary hematology analyzers measure nRBCs at very low levels compared to traditional manual morphometric methods. The original launch of the Sysmex XN analyzer in this study's clinical laboratory verified the previously used nRBC reference interval of 0.00 to 0.01 × 106/μL. However, nRBC results from apparently healthy patients were flagged as abnormal (high), subsequently causing patient anxiety and increased subspecialty referrals.</p><p><strong>Objective.—: </strong>To determine whether current reference intervals (RIs) for nRBCs were clinically relevant.</p><p><strong>Design.—: </strong>We performed a prospective analysis of 405 300 specimens from nonhospitalized individuals who received a complete blood count. Applying inclusion/exclusion criteria produced a total specimen pool of 66 498.</p><p><strong>Results.—: </strong>Of the 66 498 samples with otherwise normal complete blood count results from healthy, nonhospitalized individuals, 338 showed results outside the previously established RI; 336 of 66 498 (0.5%) had nRBC results greater than 0.01 × 106/μL. Two samples had nRBC values greater than 0.10 ×106/μL.</p><p><strong>Conclusions.—: </strong>Based on statistical analysis of our results, we concluded that the upper limit of the RI could be updated from 0.01 × 106/μL to 0.10 × 106/μL. Increasing the upper limit of normal for the nRBC RI should decrease patient consternation from an abnormal laboratory value and significantly decrease costs through reducing unnecessary follow up care, and without causing patient harm.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140023650","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Archives of pathology & laboratory medicine
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