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SRCAP mutations drive clonal hematopoiesis through epigenetic and DNA repair dysregulation. SRCAP突变通过表观遗传学和DNA修复失调驱动克隆性造血。
Pub Date : 2023-11-02 Epub Date: 2023-10-19 DOI: 10.1016/j.stem.2023.09.011
Chun-Wei Chen, Linda Zhang, Ravi Dutta, Abhishek Niroula, Peter G Miller, Christopher J Gibson, Alexander G Bick, Jaime M Reyes, Yi-Tang Lee, Ayala Tovy, Tianpeng Gu, Sarah Waldvogel, Yi-Hung Chen, Bryan J Venters, Pierre-Olivier Estève, Sriharsa Pradhan, Michael-Christopher Keogh, Pradeep Natarajan, Koichi Takahashi, Adam S Sperling, Margaret A Goodell

Somatic mutations accumulate in all cells with age and can confer a selective advantage, leading to clonal expansion over time. In hematopoietic cells, mutations in a subset of genes regulating DNA repair or epigenetics frequently lead to clonal hematopoiesis (CH). Here, we describe the context and mechanisms that lead to enrichment of hematopoietic stem cells (HSCs) with mutations in SRCAP, which encodes a chromatin remodeler that also influences DNA repair. We show that SRCAP mutations confer a selective advantage in human cells and in mice upon treatment with the anthracycline-class chemotherapeutic doxorubicin and bone marrow transplantation. Furthermore, Srcap mutations lead to a lymphoid-biased expansion, driven by loss of SRCAP-regulated H2A.Z deposition and increased DNA repair. Altogether, we demonstrate that SRCAP operates at the intersection of multiple pathways in stem and progenitor cells, offering a new perspective on the functional impact of genetic variants that promote stem cell competition in the hematopoietic system.

体细胞突变随着年龄的增长在所有细胞中积累,并可赋予选择性优势,随着时间的推移导致克隆扩增。在造血细胞中,调节DNA修复或表观遗传学的基因亚群的突变经常导致克隆性造血(CH)。在这里,我们描述了导致具有SRCAP突变的造血干细胞(HSC)富集的背景和机制,SRCAP编码染色质重塑因子,也影响DNA修复。我们发现,在蒽环类化疗药物阿霉素和骨髓移植治疗后,SRCAP突变在人类细胞和小鼠中具有选择性优势。此外,Srcap突变导致淋巴偏向性扩张,这是由Srcap调节的H2A.Z沉积的缺失和DNA修复增加驱动的。总之,我们证明SRCAP在干细胞和祖细胞的多种途径的交叉点上发挥作用,为促进造血系统中干细胞竞争的遗传变异的功能影响提供了一个新的视角。
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引用次数: 0
Hematopoietic stem cells through the ages: A lifetime of adaptation to organismal demands. 长年累月的造血干细胞:终生适应生物体需求。
Pub Date : 2023-11-02 Epub Date: 2023-10-20 DOI: 10.1016/j.stem.2023.09.013
Monica Kasbekar, Carl A Mitchell, Melissa A Proven, Emmanuelle Passegué

Hematopoietic stem cells (HSCs), which govern the production of all blood lineages, transition through a series of functional states characterized by expansion during fetal development, functional quiescence in adulthood, and decline upon aging. We describe central features of HSC regulation during ontogeny to contextualize how adaptive responses over the life of the organism ultimately form the basis for HSC functional degradation with age. We particularly focus on the role of cell cycle regulation, inflammatory response pathways, epigenetic changes, and metabolic regulation. We then explore how the knowledge of age-related changes in HSC regulation can inform strategies for the rejuvenation of old HSCs.

造血干细胞(HSC)控制着所有血液谱系的产生,通过一系列功能状态转变,其特征是胎儿发育过程中的扩张、成年后的功能静止和衰老后的衰退。我们描述了个体发生过程中HSC调节的中心特征,以了解生物体生命中的适应性反应如何最终形成HSC功能随年龄退化的基础。我们特别关注细胞周期调节、炎症反应途径、表观遗传学变化和代谢调节的作用。然后,我们探讨了HSC调节中与年龄相关的变化的知识如何为老年HSC的再生策略提供信息。
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引用次数: 0
Spatial-temporal proliferation of hepatocytes during pregnancy revealed by genetic lineage tracing. 遗传谱系追踪揭示妊娠期肝细胞的时空增殖。
Pub Date : 2023-11-02 Epub Date: 2023-10-03 DOI: 10.1016/j.stem.2023.09.002
Shun He, Zhihou Guo, Mingshan Zhou, Haichang Wang, Zhuonan Zhang, Mengyang Shi, Xufeng Li, Xueying Yang, Lingjuan He

The maternal liver undergoes dramatic enlargement to adapt to the increased metabolic demands during pregnancy. However, the cellular sources for liver growth during pregnancy remain largely elusive. Here, we employed a proliferation recording system, ProTracer, to examine the spatial-temporal proliferation of hepatocytes during pregnancy. We discovered that during early to late pregnancy, hepatocyte proliferation initiated from zone 1, to zone 2, and lastly to zone 3, with the majority of new hepatocytes being generated in zone 2. Additionally, using single-cell RNA sequencing, we observed that Ccnd1 was highly enriched in zone 2 hepatocytes. We further applied dual-recombinase-mediated genetic lineage tracing to reveal that Ccnd1+ hepatocytes expanded preferentially during pregnancy. Moreover, we demonstrated that estrogen induces liver enlargement during pregnancy, which was abolished in Ccnd1 knockout mice. Our work revealed a unique spatial-temporal hepatocyte proliferation pattern during pregnancy, with Ccnd1+ hepatocytes in zone 2 serving as the major cellular source for hepatic enlargement.

母体肝脏急剧增大,以适应妊娠期间增加的代谢需求。然而,妊娠期肝脏生长的细胞来源在很大程度上仍然难以捉摸。在这里,我们使用了一种增殖记录系统ProTracer来检查妊娠期间肝细胞的时空增殖。我们发现,在妊娠早期至晚期,肝细胞增殖从1区开始,到2区,最后到3区,大多数新肝细胞在2区产生。此外,使用单细胞RNA测序,我们观察到Ccnd1在2区肝细胞中高度富集。我们进一步应用双重组酶介导的遗传谱系追踪来揭示Ccnd1+肝细胞在妊娠期间优先扩增。此外,我们证明了雌激素在妊娠期间诱导肝脏肿大,而Ccnd1基因敲除小鼠的这种情况已被消除。我们的研究揭示了妊娠期独特的肝细胞时空增殖模式,2区的Ccnd1+肝细胞是肝脏肿大的主要细胞来源。
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引用次数: 0
Genome-wide CRISPR activation screening in senescent cells reveals SOX5 as a driver and therapeutic target of rejuvenation. 衰老细胞中的全基因组CRISPR激活筛选揭示了SOX5是年轻化的驱动因素和治疗靶点。
Pub Date : 2023-11-02 Epub Date: 2023-10-12 DOI: 10.1016/j.stem.2023.09.007
Yaobin Jing, Xiaoyu Jiang, Qianzhao Ji, Zeming Wu, Wei Wang, Zunpeng Liu, Pedro Guillen-Garcia, Concepcion Rodriguez Esteban, Pradeep Reddy, Steve Horvath, Jingyi Li, Lingling Geng, Qinchao Hu, Si Wang, Juan Carlos Izpisua Belmonte, Jie Ren, Weiqi Zhang, Jing Qu, Guang-Hui Liu

Our understanding of the molecular basis for cellular senescence remains incomplete, limiting the development of strategies to ameliorate age-related pathologies by preventing stem cell senescence. Here, we performed a genome-wide CRISPR activation (CRISPRa) screening using a human mesenchymal precursor cell (hMPC) model of the progeroid syndrome. We evaluated targets whose activation antagonizes cellular senescence, among which SOX5 outperformed as a top hit. Through decoding the epigenomic landscapes remodeled by overexpressing SOX5, we uncovered its role in resetting the transcription network for geroprotective genes, including HMGB2. Mechanistically, SOX5 binding elevated the enhancer activity of HMGB2 with increased levels of H3K27ac and H3K4me1, raising HMGB2 expression so as to promote rejuvenation. Furthermore, gene therapy with lentiviruses carrying SOX5 or HMGB2 rejuvenated cartilage and alleviated osteoarthritis in aged mice. Our study generated a comprehensive list of rejuvenators, pinpointing SOX5 as a potent driver for rejuvenation both in vitro and in vivo.

我们对细胞衰老的分子基础的理解仍然不完整,这限制了通过预防干细胞衰老来改善年龄相关疾病的策略的发展。在这里,我们使用孕激素综合征的人间充质前体细胞(hMPC)模型进行了全基因组CRISPR激活(CRISPRa)筛选。我们评估了激活可拮抗细胞衰老的靶点,其中SOX5表现出色。通过解码过表达SOX5重塑的表观基因组景观,我们揭示了它在重置包括HMGB2在内的gerproprotective基因转录网络中的作用。从机制上讲,SOX5结合提高了HMGB2的增强子活性,同时增加了H3K27ac和H3K4me1的水平,提高了HMGB 2的表达,从而促进再生。此外,携带SOX5或HMGB2的慢病毒的基因治疗使衰老小鼠的软骨恢复活力并减轻骨关节炎。我们的研究生成了一份全面的再生剂清单,确定SOX5是体外和体内再生的有力驱动因素。
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引用次数: 0
Skull progenitor cell-driven meningeal lymphatic restoration improves neurocognitive functions in craniosynostosis. 颅骨祖细胞驱动的脑膜淋巴修复可改善颅缝闭合症的神经认知功能。
Pub Date : 2023-11-02 Epub Date: 2023-10-19 DOI: 10.1016/j.stem.2023.09.012
Li Ma, Qing Chang, Fei Pei, Mengmeng Liu, Wei Zhang, Young-Kwon Hong, Yang Chai, Jian-Fu Chen

The meninges lie in the interface between the skull and brain, harboring lymphatic vasculature and skull progenitor cells (SPCs). How the skull and brain communicate remains largely unknown. We found that impaired meningeal lymphatics and brain perfusion drive neurocognitive defects in Twist1+/- mice, an animal model of craniosynostosis recapitulating human Saethre-Chotzen syndrome. Loss of SPCs leads to skull deformities and elevated intracranial pressure (ICP), whereas transplanting SPCs back into mutant mice mitigates lymphatic and brain defects through two mechanisms: (1) decreasing elevated ICP by skull correction and (2) promoting the growth and migration of lymphatic endothelial cells (LECs) via SPC-secreted vascular endothelial growth factor-C (VEGF-C). Treating Twist1+/- mice with VEGF-C promotes meningeal lymphatic growth and rescues defects in ICP, brain perfusion, and neurocognitive functions. Thus, the skull functionally integrates with the brain via meningeal lymphatics, which is impaired in craniosynostosis and can be restored by SPC-driven lymphatic activation via VEGF-C.

脑膜位于颅骨和大脑之间的界面,含有淋巴血管系统和颅骨祖细胞(SPC)。头骨和大脑是如何交流的在很大程度上仍然未知。我们发现,脑膜淋巴管和脑灌注受损导致Twist1+/-小鼠的神经认知缺陷,Twist1++-小鼠是一种再现人类Saethre-Chotzen综合征的颅缝闭合症动物模型。SPCs的缺失会导致颅骨畸形和颅内压升高(ICP),而将SPCs移植回突变小鼠体内通过两种机制减轻淋巴和大脑缺陷:(1)通过颅骨矫正降低升高的ICP;(2)通过SPC分泌的血管内皮生长因子-C(VEGF-C)促进淋巴内皮细胞(LECs)的生长和迁移。用VEGF-C治疗Twist1+/-小鼠可促进脑膜淋巴管生长,挽救ICP、脑灌注和神经认知功能的缺陷。因此,颅骨通过脑膜淋巴管与大脑功能整合,脑膜淋巴管在颅缝闭合中受损,可以通过VEGF-C通过SPC驱动的淋巴激活来恢复。
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引用次数: 0
Human pallial MGE-type GABAergic interneuron cell therapy for chronic focal epilepsy. 人大脑皮层MGE型GABA能中间神经元细胞治疗慢性局灶性癫痫。
Pub Date : 2023-10-05 DOI: 10.1016/j.stem.2023.08.013
Marina Bershteyn, Sonja Bröer, Mansi Parekh, Yves Maury, Steven Havlicek, Sonja Kriks, Luis Fuentealba, Seonok Lee, Robin Zhou, Geetha Subramanyam, Meliz Sezan, Eric Steven Sevilla, Whitney Blankenberger, Julien Spatazza, Li Zhou, Hubert Nethercott, David Traver, Philip Hampel, Hannah Kim, Michael Watson, Naomi Salter, Anastasia Nesterova, Wai Au, Arnold Kriegstein, Arturo Alvarez-Buylla, John Rubenstein, Gautam Banik, Alessandro Bulfone, Catherine Priest, Cory R Nicholas

Mesial temporal lobe epilepsy (MTLE) is the most common focal epilepsy. One-third of patients have drug-refractory seizures and are left with suboptimal therapeutic options such as brain tissue-destructive surgery. Here, we report the development and characterization of a cell therapy alternative for drug-resistant MTLE, which is derived from a human embryonic stem cell line and comprises cryopreserved, post-mitotic, medial ganglionic eminence (MGE) pallial-type GABAergic interneurons. Single-dose intrahippocampal delivery of the interneurons in a mouse model of chronic MTLE resulted in consistent mesiotemporal seizure suppression, with most animals becoming seizure-free and surviving longer. The grafted interneurons dispersed locally, functionally integrated, persisted long term, and significantly reduced dentate granule cell dispersion, a pathological hallmark of MTLE. These disease-modifying effects were dose-dependent, with a broad therapeutic range. No adverse effects were observed. These findings support an ongoing phase 1/2 clinical trial (NCT05135091) for drug-resistant MTLE.

颞叶间叶癫痫(MTLE)是最常见的局灶性癫痫。三分之一的患者患有药物难治性癫痫,只能选择次优的治疗方案,如脑组织破坏性手术。在此,我们报道了耐药MTLE的细胞治疗替代品的开发和表征,该替代品来源于人类胚胎干细胞系,包括冷冻保存的、有丝分裂后的内侧神经节隆起(MGE)皮层型GABA能中间神经元。在慢性MTLE小鼠模型中,单剂量海马内递送中间神经元可持续抑制近中时癫痫发作,大多数动物无癫痫发作,存活时间更长。移植的中间神经元局部分散,功能整合,长期存在,并显著减少齿状颗粒细胞的分散,这是MTLE的病理标志。这些疾病改善作用是剂量依赖性的,具有广泛的治疗范围。未观察到不良反应。这些发现支持正在进行的耐药MTLE 1/2期临床试验(NCT05135091)。
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引用次数: 0
The variability of judicial decisions in the stem cell industry in China. 中国干细胞行业司法判决的可变性。
Pub Date : 2023-10-05 DOI: 10.1016/j.stem.2023.09.005
Luxia Chen, Jianchao Gao, Ruohan Feng, Yaojin Peng

As China's stem cell industry continues to develop, increasing disputes concerning stem cell-based interventions have been brought before the courts. Nonetheless, there is variability in the courts' understanding and attitude toward the regulatory attributes of these interventions, which to some extent has multifaceted impacts on the stem cell field.

随着中国干细胞产业的不断发展,越来越多的有关干细胞干预的争议被提交法院。尽管如此,法院对这些干预措施的监管属性的理解和态度存在差异,这在一定程度上对干细胞领域产生了多方面的影响。
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引用次数: 0
Complement factor D targeting protects endotheliopathy in organoid and monkey models of COVID-19. 补体因子D靶向保护新冠肺炎类器官和猴子模型中的内皮病变。
Pub Date : 2023-10-05 DOI: 10.1016/j.stem.2023.09.001
Eri Kawakami, Norikazu Saiki, Yosuke Yoneyama, Chiharu Moriya, Mari Maezawa, Shuntaro Kawamura, Akiko Kinebuchi, Tamaki Kono, Masaaki Funata, Ayaka Sakoda, Shigeru Kondo, Takeshi Ebihara, Hisatake Matsumoto, Yuki Togami, Hiroshi Ogura, Fuminori Sugihara, Daisuke Okuzaki, Takashi Kojima, Sayaka Deguchi, Sebastien Vallee, Susan McQuade, Rizwana Islam, Madhusudan Natarajan, Hirohito Ishigaki, Misako Nakayama, Cong Thanh Nguyen, Yoshinori Kitagawa, Yunheng Wu, Kensaku Mori, Takayuki Hishiki, Tomohiko Takasaki, Yasushi Itoh, Kazuo Takayama, Yasunori Nio, Takanori Takebe

COVID-19 is linked to endotheliopathy and coagulopathy, which can result in multi-organ failure. The mechanisms causing endothelial damage due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) remain elusive. Here, we developed an infection-competent human vascular organoid from pluripotent stem cells for modeling endotheliopathy. Longitudinal serum proteome analysis identified aberrant complement signature in critically ill patients driven by the amplification cycle regulated by complement factor B and D (CFD). This deviant complement pattern initiates endothelial damage, neutrophil activation, and thrombosis specific to organoid-derived human blood vessels, as verified through intravital imaging. We examined a new long-acting, pH-sensitive (acid-switched) antibody targeting CFD. In both human and macaque COVID-19 models, this long-acting anti-CFD monoclonal antibody mitigated abnormal complement activation, protected endothelial cells, and curtailed the innate immune response post-viral exposure. Collectively, our findings suggest that the complement alternative pathway exacerbates endothelial injury and inflammation. This underscores the potential of CFD-targeted therapeutics against severe viral-induced inflammathrombotic outcomes.

新冠肺炎与内皮病变和凝血障碍有关,这可能导致多器官衰竭。严重急性呼吸综合征冠状病毒2型(SARS-CoV-2)导致内皮损伤的机制仍然难以捉摸。在这里,我们从多能干细胞中开发了一种具有感染能力的人类血管类器官,用于模拟内皮病变。纵向血清蛋白质组分析确定了危重患者中由补体因子B和D(CFD)调节的扩增周期驱动的异常补体特征。这种异常的补体模式引发内皮损伤、中性粒细胞活化和类器官衍生的人类血管特有的血栓形成,这一点已通过活体内成像得到证实。我们检测了一种针对CFD的新型长效、pH敏感(酸转换)抗体。在人类和猕猴新冠肺炎模型中,这种长效抗-CFD单克隆抗体减轻了补体的异常激活,保护了内皮细胞,并减少了病毒暴露后的先天免疫反应。总之,我们的研究结果表明,补体替代途径会加剧内皮损伤和炎症。这突出了CFD靶向治疗对严重病毒诱导的炎症血栓形成结果的潜力。
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引用次数: 0
Seizing hope: Advancing cell therapy for pharmaco-resistant epilepsy toward the clinic. 抓住希望:将耐药癫痫的细胞治疗推向临床。
Pub Date : 2023-10-05 DOI: 10.1016/j.stem.2023.08.006
Ana Beltrán Arranz, Benedikt Berninger

In this issue of Cell Stem Cell, Bershteyn et al.1 developed a human interneuron cell therapy that reduced spontaneous seizure activity in a mouse model of mesial temporal lobe epilepsy (MTLE). The data presented here support an ongoing phase 1/2 clinical trial for the treatment of pharmaco-resistant epilepsy in patients.

在本期《细胞干细胞》杂志中,Bershteyn等人1开发了一种人类中间神经元细胞疗法,该疗法降低了内侧颞叶癫痫(MTLE)小鼠模型中的自发癫痫发作活性。本文提供的数据支持正在进行的治疗患者药物耐药性癫痫的1/2期临床试验。
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引用次数: 0
Tissue morphology influences the temporal program of human brain organoid development. 组织形态学影响人类大脑类器官发育的时间程序。
Pub Date : 2023-10-05 DOI: 10.1016/j.stem.2023.09.003
Ilaria Chiaradia, Ivan Imaz-Rosshandler, Benedikt S Nilges, Jerome Boulanger, Laura Pellegrini, Richa Das, Nachiket D Kashikar, Madeline A Lancaster

Progression through fate decisions determines cellular composition and tissue architecture, but how that same architecture may impact cell fate is less clear. We took advantage of organoids as a tractable model to interrogate this interaction of form and fate. Screening methodological variations revealed that common protocol adjustments impacted various aspects of morphology, from macrostructure to tissue architecture. We examined the impact of morphological perturbations on cell fate through integrated single nuclear RNA sequencing (snRNA-seq) and spatial transcriptomics. Regardless of the specific protocol, organoids with more complex morphology better mimicked in vivo human fetal brain development. Organoids with perturbed tissue architecture displayed aberrant temporal progression, with cells being intermingled in both space and time. Finally, encapsulation to impart a simplified morphology led to disrupted tissue cytoarchitecture and a similar abnormal maturational timing. These data demonstrate that cells of the developing brain require proper spatial coordinates to undergo correct temporal progression.

通过命运决定的进展决定了细胞组成和组织结构,但同样的结构如何影响细胞命运尚不清楚。我们利用类器官作为一个易于处理的模型来探究这种形式和命运的相互作用。筛选方法的变化表明,常见的方案调整影响了形态学的各个方面,从宏观结构到组织结构。我们通过整合单核RNA测序(snRNA-seq)和空间转录组学研究了形态扰动对细胞命运的影响。无论具体方案如何,形态更复杂的类器官都能更好地模拟体内人类胎儿大脑的发育。组织结构紊乱的类器官表现出异常的时间进展,细胞在空间和时间上都混杂在一起。最后,封装以赋予简化的形态导致组织细胞结构紊乱和类似的异常成熟时间。这些数据表明,发育中的大脑细胞需要适当的空间坐标才能进行正确的时间进展。
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引用次数: 0
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