首页 > 最新文献

Journal of dental research最新文献

英文 中文
Periodontitis and Diabetes Differentially Affect Inflammation in Obesity. 牙周炎和糖尿病对肥胖症炎症的影响各不相同
IF 5.9 Pub Date : 2024-11-01 Epub Date: 2024-10-09 DOI: 10.1177/00220345241280743
S SantaCruz-Calvo, S Saraswat, H Hasturk, D R Dawson, X D Zhang, B S Nikolajczyk

Periodontitis (PD) potentiates systemic inflammatory diseases and fuels a feed-forward loop of pathogenic inflammation in obesity and type 2 diabetes (T2D). Published work in this area often conflates obesity with obesity-associated T2D; thus, it remains unclear whether PD similarly affects the inflammatory profiles of these 2 distinct systemic diseases. We collected peripheral blood mononuclear cells (PBMCs) from cross-sectionally recruited subjects to estimate the ability of PD to affect cytokine production in human obesity and/or T2D. We analyzed 2 major sources of systemic inflammation: T cells and myeloid cells. Bioplex quantitated cytokines secreted by PBMCs stimulated with T cell- or myeloid-targeting activators, and we combinatorially analyzed outcomes using partial least squares discriminant analysis. Our data show that PD significantly shifts peripheral T cell- and myeloid-generated inflammation in obesity. PD also changed myeloid- but not T cell-generated inflammation in T2D. T2D changed inflammation in samples from subjects with PD, and PD changed inflammation in samples from subjects with T2D, consistent with the bidirectional relationship of inflammation between these 2 conditions. PBMCs from T2D subjects with stage IV PD produced lower amounts of T cell and myeloid cytokines compared with PBMCs from T2D subjects with stage II to III PD. We conclude that PD and T2D affect systemic inflammation through overlapping but nonidentical mechanisms in obesity, indicating that characterizing both oral and metabolic status (beyond obesity) is critical for identifying mechanisms linking PD to systemic diseases such as obesity and T2D. The finding that stage IV PD cells generate fewer cytokines in T2D provides an explanation for the paradoxical findings that the immune system can appear activated or suppressed in PD, given that many studies do not report PD stage. Finally, our data indicate that a focus on multiple cellular sources of cytokines will be imperative to clinically address the systemic effects of PD in people with obesity.

牙周炎(PD)会加剧全身炎症性疾病,并助长肥胖和 2 型糖尿病(T2D)致病性炎症的前馈循环。该领域已发表的研究往往将肥胖与肥胖相关的 T2D 混为一谈;因此,目前仍不清楚牙周炎是否会同样影响这两种不同系统疾病的炎症特征。我们收集了横断面招募对象的外周血单核细胞(PBMCs),以评估 PD 影响人类肥胖和/或 T2D 中细胞因子产生的能力。我们分析了全身炎症的两个主要来源:T细胞和骨髓细胞。Bioplex 定量分析了受 T 细胞或髓样细胞靶向激活剂刺激的 PBMC 所分泌的细胞因子,我们使用偏最小二乘法判别分析对结果进行了组合分析。我们的数据显示,肥胖症患者的外周 T 细胞和髓细胞引发的炎症发生了明显变化。PD也改变了T2D患者髓细胞产生的炎症,但没有改变T细胞产生的炎症。T2D改变了PD受试者样本中的炎症,而PD改变了T2D受试者样本中的炎症,这与这两种情况之间炎症的双向关系一致。与 T2D II 至 III 期患者的 PBMC 相比,T2D IV 期患者的 PBMC 产生的 T 细胞和髓细胞因子较少。我们的结论是,PD 和 T2D 通过重叠但不相同的机制影响肥胖症的全身炎症,这表明要确定 PD 与肥胖症和 T2D 等全身疾病的关联机制,口腔和代谢状态(肥胖症除外)的特征至关重要。在 T2D 中,IV 期 PD 细胞产生的细胞因子较少,这一发现为免疫系统在 PD 中可能出现激活或抑制的矛盾发现提供了解释,因为许多研究并未报告 PD 的分期。最后,我们的数据表明,要在临床上解决肥胖症患者腹膜透析的系统性影响,就必须关注细胞因子的多种细胞来源。
{"title":"Periodontitis and Diabetes Differentially Affect Inflammation in Obesity.","authors":"S SantaCruz-Calvo, S Saraswat, H Hasturk, D R Dawson, X D Zhang, B S Nikolajczyk","doi":"10.1177/00220345241280743","DOIUrl":"10.1177/00220345241280743","url":null,"abstract":"<p><p>Periodontitis (PD) potentiates systemic inflammatory diseases and fuels a feed-forward loop of pathogenic inflammation in obesity and type 2 diabetes (T2D). Published work in this area often conflates obesity with obesity-associated T2D; thus, it remains unclear whether PD similarly affects the inflammatory profiles of these 2 distinct systemic diseases. We collected peripheral blood mononuclear cells (PBMCs) from cross-sectionally recruited subjects to estimate the ability of PD to affect cytokine production in human obesity and/or T2D. We analyzed 2 major sources of systemic inflammation: T cells and myeloid cells. Bioplex quantitated cytokines secreted by PBMCs stimulated with T cell- or myeloid-targeting activators, and we combinatorially analyzed outcomes using partial least squares discriminant analysis. Our data show that PD significantly shifts peripheral T cell- and myeloid-generated inflammation in obesity. PD also changed myeloid- but not T cell-generated inflammation in T2D. T2D changed inflammation in samples from subjects with PD, and PD changed inflammation in samples from subjects with T2D, consistent with the bidirectional relationship of inflammation between these 2 conditions. PBMCs from T2D subjects with stage IV PD produced lower amounts of T cell and myeloid cytokines compared with PBMCs from T2D subjects with stage II to III PD. We conclude that PD and T2D affect systemic inflammation through overlapping but nonidentical mechanisms in obesity, indicating that characterizing both oral and metabolic status (beyond obesity) is critical for identifying mechanisms linking PD to systemic diseases such as obesity and T2D. The finding that stage IV PD cells generate fewer cytokines in T2D provides an explanation for the paradoxical findings that the immune system can appear activated or suppressed in PD, given that many studies do not report PD stage. Finally, our data indicate that a focus on multiple cellular sources of cytokines will be imperative to clinically address the systemic effects of PD in people with obesity.</p>","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1313-1322"},"PeriodicalIF":5.9,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11653319/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142396339","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Surrogate Endpoints: CONSORT and SPIRIT Extensions. 替代终点:CONSORT 和 SPIRIT 扩展。
Pub Date : 2024-11-01 Epub Date: 2024-10-06 DOI: 10.1177/00220345241275479
F Schwendicke, N S Jakubovics
{"title":"Surrogate Endpoints: CONSORT and SPIRIT Extensions.","authors":"F Schwendicke, N S Jakubovics","doi":"10.1177/00220345241275479","DOIUrl":"10.1177/00220345241275479","url":null,"abstract":"","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1163-1164"},"PeriodicalIF":0.0,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11562281/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142383009","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Nuclear TOP1MT Confers Cisplatin Resistance via Pseudogene in HNSCC. 核 TOP1MT 在 HNSCC 中通过伪基因产生顺铂抗性
IF 5.9 Pub Date : 2024-11-01 Epub Date: 2024-10-09 DOI: 10.1177/00220345241272017
T Tong, P S Zhai, X Qin, Z Zhang, C W Li, H Y Guo, H L Ma

Cisplatin resistance is one of the major causes of treatment failure in head and neck squamous cell carcinoma (HNSCC). There is an urgent need to uncover the underlying mechanism for developing effective treatment strategies. A quantitative proteomics assay was used to identify differential proteins in cisplatin-resistant cells. Mitochondrial topoisomerase I (TOP1MT) localization was determined using laser confocal microscopy and nucleocytoplasmic separation assay. Chromatin immunoprecipitation sequencing, dual-luciferase reporter assay, and RNA immunoprecipitation were used to identify the interaction between pseudogenes, miRNAs, and real genes. In vivo experiments verified the interaction between TOP1MT and pseudogenes on cisplatin resistance. TOP1MT was identified as a driving factor of cisplatin resistance in vitro, in vivo, and in HNSCC patients. Moreover, TOP1MT exceptionally translocated to the nucleus in cisplatin-resistant HNSCC cells in a signal peptide-dependent manner. Nuclear TOP1MT (nTOP1MT) transcriptionally regulated the mitochondrial functional pseudogene MTATP6P1, which bound to miR-137 and miR-491-5p as a competing endogenous RNA (ceRNA) and promoted the expression of MTATP6. An increase in MTATP6 enhanced mitochondrial oxidative phosphorylation (OXPHOS), which conferred cisplatin resistance in HNSCC. Our findings revealed that nTOP1MT transcriptionally activated MTAPT6P1 and increased MTATP6 expression via ceRNA, which facilitated OXPHOS and cisplatin resistance. These results provide novel insight for overcoming cisplatin resistance in HNSCC.

顺铂耐药性是头颈部鳞状细胞癌(HNSCC)治疗失败的主要原因之一。目前迫切需要揭示其潜在机制,以制定有效的治疗策略。本研究采用定量蛋白质组学分析方法来鉴定顺铂耐药细胞中的差异蛋白质。线粒体拓扑异构酶I(TOP1MT)的定位是通过激光共聚焦显微镜和核胞质分离试验确定的。染色质免疫共沉淀测序、双荧光素酶报告分析和 RNA 免疫共沉淀被用来鉴定伪基因、miRNA 和真基因之间的相互作用。体内实验验证了 TOP1MT 与伪基因之间在顺铂抗性上的相互作用。在体外、体内和 HNSCC 患者中,TOP1MT 被确定为顺铂耐药性的驱动因素。此外,在顺铂耐药的 HNSCC 细胞中,TOP1MT 例外地以信号肽依赖的方式转位到细胞核中。核TOP1MT(nTOP1MT)转录调控线粒体功能假基因MTATP6P1,MTATP6P1作为竞争性内源性RNA(ceRNA)与miR-137和miR-491-5p结合,促进MTATP6的表达。MTATP6的增加增强了线粒体氧化磷酸化(OXPHOS),从而赋予了HNSCC顺铂抗性。我们的研究结果表明,nTOP1MT可通过ceRNA转录激活MTAPT6P1并增加MTATP6的表达,从而促进OXPHOS和顺铂抗性。这些结果为克服 HNSCC 的顺铂耐药性提供了新的见解。
{"title":"Nuclear TOP1MT Confers Cisplatin Resistance via Pseudogene in HNSCC.","authors":"T Tong, P S Zhai, X Qin, Z Zhang, C W Li, H Y Guo, H L Ma","doi":"10.1177/00220345241272017","DOIUrl":"10.1177/00220345241272017","url":null,"abstract":"<p><p>Cisplatin resistance is one of the major causes of treatment failure in head and neck squamous cell carcinoma (HNSCC). There is an urgent need to uncover the underlying mechanism for developing effective treatment strategies. A quantitative proteomics assay was used to identify differential proteins in cisplatin-resistant cells. Mitochondrial topoisomerase I (TOP1MT) localization was determined using laser confocal microscopy and nucleocytoplasmic separation assay. Chromatin immunoprecipitation sequencing, dual-luciferase reporter assay, and RNA immunoprecipitation were used to identify the interaction between pseudogenes, miRNAs, and real genes. In vivo experiments verified the interaction between TOP1MT and pseudogenes on cisplatin resistance. TOP1MT was identified as a driving factor of cisplatin resistance in vitro, in vivo, and in HNSCC patients. Moreover, TOP1MT exceptionally translocated to the nucleus in cisplatin-resistant HNSCC cells in a signal peptide-dependent manner. Nuclear TOP1MT (nTOP1MT) transcriptionally regulated the mitochondrial functional pseudogene MTATP6P1, which bound to miR-137 and miR-491-5p as a competing endogenous RNA (ceRNA) and promoted the expression of MTATP6. An increase in MTATP6 enhanced mitochondrial oxidative phosphorylation (OXPHOS), which conferred cisplatin resistance in HNSCC. Our findings revealed that nTOP1MT transcriptionally activated MTAPT6P1 and increased MTATP6 expression via ceRNA, which facilitated OXPHOS and cisplatin resistance. These results provide novel insight for overcoming cisplatin resistance in HNSCC.</p>","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1238-1248"},"PeriodicalIF":5.9,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11653318/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142396338","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A Review of Immunotherapy for Head and Neck Cancer. 头颈癌免疫疗法综述。
IF 5.9 Pub Date : 2024-11-01 Epub Date: 2024-10-06 DOI: 10.1177/00220345241271992
J W Goetz, G Rabinowits, N Kalman, A Villa

The introduction of immune checkpoint inhibitors (ICIs) to oncological care has transformed the management of various malignancies, including head and neck squamous cell carcinoma (HNSCC), offering improved outcomes. The first-line treatment of recurrent and malignant HNSCC for many years was combined platinum, 5-fluorouracil, and cetuximab. Recently, the ICI pembrolizumab was approved as a first-line treatment, with or without chemotherapy, based on tumor and immune cell percentage of programmed-death ligand 1 (PD-L1). Multiple head and neck (HN) cancer trials have subsequently explored immunotherapies in combination with surgery, chemotherapy, and/or radiation. Immunotherapy regimens may be personalized by tumor biomarker, including PD-L1 content, tumor mutational burden, and microsatellite instability. However, further clinical trials are needed to refine biomarker-driven protocols and standardize pathological methods to guide combined regimen timing, sequencing, and deescalation. Gaps remain for protocols using immunotherapy to reverse oral premalignant lesions, particularly high-risk leukoplakias. A phase II nonrandomized controlled trial, using the ICI nivolumab, showed a 2-y cancer-free survival of 73%, although larger trials are needed. Guidelines are also needed to standardize the role of dental evaluation and care before, during, and after immunotherapy, specifically in regard to oral immune-related adverse events and their impact on cancer recurrence. Standardized diagnostic and oral care coordination strategies to close these gaps are needed to ensure continued success of HN cancer immunotherapy.

在肿瘤治疗中引入免疫检查点抑制剂(ICIs)改变了包括头颈部鳞状细胞癌(HNSCC)在内的各种恶性肿瘤的治疗方法,从而改善了治疗效果。多年来,复发性和恶性 HNSCC 的一线治疗方法是联合使用铂、5-氟尿嘧啶和西妥昔单抗。最近,根据肿瘤和免疫细胞中程序性死亡配体 1(PD-L1)的百分比,ICI pembrolizumab 被批准作为一线治疗药物,无论是否进行化疗。随后,多项头颈部(HN)癌症试验探索了免疫疗法与手术、化疗和/或放疗的联合应用。免疫疗法方案可根据肿瘤生物标志物(包括 PD-L1 含量、肿瘤突变负荷和微卫星不稳定性)进行个性化设计。然而,还需要进一步的临床试验来完善生物标志物驱动的方案,并规范病理学方法,以指导联合方案的时机、排序和降级。利用免疫疗法逆转口腔癌前病变(尤其是高风险白斑)的方案仍存在空白。一项采用 ICI nivolumab 的 II 期非随机对照试验显示,2 年无癌生存率为 73%,但仍需进行更大规模的试验。还需要制定指南来规范免疫疗法前、中、后牙科评估和护理的作用,特别是口腔免疫相关不良事件及其对癌症复发的影响。需要标准化的诊断和口腔护理协调策略来缩小这些差距,以确保 HN 癌症免疫疗法的持续成功。
{"title":"A Review of Immunotherapy for Head and Neck Cancer.","authors":"J W Goetz, G Rabinowits, N Kalman, A Villa","doi":"10.1177/00220345241271992","DOIUrl":"10.1177/00220345241271992","url":null,"abstract":"<p><p>The introduction of immune checkpoint inhibitors (ICIs) to oncological care has transformed the management of various malignancies, including head and neck squamous cell carcinoma (HNSCC), offering improved outcomes. The first-line treatment of recurrent and malignant HNSCC for many years was combined platinum, 5-fluorouracil, and cetuximab. Recently, the ICI pembrolizumab was approved as a first-line treatment, with or without chemotherapy, based on tumor and immune cell percentage of programmed-death ligand 1 (PD-L1). Multiple head and neck (HN) cancer trials have subsequently explored immunotherapies in combination with surgery, chemotherapy, and/or radiation. Immunotherapy regimens may be personalized by tumor biomarker, including PD-L1 content, tumor mutational burden, and microsatellite instability. However, further clinical trials are needed to refine biomarker-driven protocols and standardize pathological methods to guide combined regimen timing, sequencing, and deescalation. Gaps remain for protocols using immunotherapy to reverse oral premalignant lesions, particularly high-risk leukoplakias. A phase II nonrandomized controlled trial, using the ICI nivolumab, showed a 2-y cancer-free survival of 73%, although larger trials are needed. Guidelines are also needed to standardize the role of dental evaluation and care before, during, and after immunotherapy, specifically in regard to oral immune-related adverse events and their impact on cancer recurrence. Standardized diagnostic and oral care coordination strategies to close these gaps are needed to ensure continued success of HN cancer immunotherapy.</p>","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1185-1196"},"PeriodicalIF":5.9,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11653306/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142383006","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetically Supported Drug Targets and Dental Traits: A Mendelian Randomization Study. 基因支持药物靶点与牙齿特征:孟德尔随机化研究。
IF 5.9 Pub Date : 2024-11-01 Epub Date: 2024-10-06 DOI: 10.1177/00220345241272045
L Liu, T Wang, C Duan, S Mao, B Wu, Y Chen, D Huang, Y Cao

Current interventions for oral/dental diseases heavily rely on operative/surgical procedures, while the discovery of novel drug targets may enable access to noninvasive pharmacotherapy. Therefore, this study aims to leverage large-scale data and Mendelian randomization (MR) techniques, utilizing genetic variants as instruments, to identify potential therapeutic targets for oral and dental diseases supported by genetic evidence. By intersecting 4,302 druggable genes with expression quantitative trait loci from 31,684 blood samples, we identified 2,580 druggable targets as exposures. Single nucleotide polymorphisms associated with dental disease/symptom traits were collected from FinnGen R9, the Gene-Lifestyle Interactions in Dental Endpoints consortium, and the UK Biobank to serve as outcomes for both discovery and replication purposes. Through MR analysis, we identified 43 druggable targets for various dental disease/symptom traits. To evaluate the viability of these targets, we replicated the analysis using circulating protein quantitative trait loci as exposures. Additionally, we conducted sensitivity, colocalization, Gene Ontology/Kyoto Encyclopedia of Genes and Genomes annotation, protein-protein interaction analyses, and validated dental trait-associated druggable gene expression in animal models. Among these targets, IL12RB1 (odds ratio [OR], 1.01; 95% confidence interval [CI], 1.01-1.01) and TNF (OR, 0.98; 95% CI, 0.97-0.99) exhibited therapeutic promise for oral ulcers, whereas CXCL10 (OR, 0.84; 95% CI, 0.76-0.91) was for periodontitis. Through a rigorous quality control and validation pipeline, our study yields compelling evidence for these druggable targets, which may enhance the clinical prognosis by developing novel drugs or repurposing existing ones.

目前对口腔/牙科疾病的干预在很大程度上依赖于手术/外科手术,而新型药物靶点的发现则可能使人们获得非侵入性的药物治疗。因此,本研究旨在利用大规模数据和孟德尔随机化(Mendelian randomization,MR)技术,以基因变异为工具,找出有基因证据支持的口腔和牙科疾病潜在治疗靶点。通过将 31,684 份血液样本中的 4,302 个可用药基因与表达定量性状位点相交叉,我们确定了 2,580 个可用药靶点作为暴露因子。与牙科疾病/症状特征相关的单核苷酸多态性是从 FinnGen R9、牙科终点基因与生活方式相互作用联盟和英国生物库中收集的,作为发现和复制的结果。通过磁共振分析,我们确定了 43 个可用于治疗各种牙科疾病/症状特征的靶点。为了评估这些靶点的可行性,我们使用循环蛋白定量性状位点作为暴露因子进行了重复分析。此外,我们还进行了灵敏度、共定位、基因本体/京都基因和基因组百科全书注释、蛋白-蛋白相互作用分析,并在动物模型中验证了与牙齿性状相关的可药用基因的表达。在这些靶点中,IL12RB1(几率比 [OR],1.01;95% 置信区间 [CI],1.01-1.01)和 TNF(OR,0.98;95% CI,0.97-0.99)对口腔溃疡有治疗前景,而 CXCL10(OR,0.84;95% CI,0.76-0.91)则对牙周炎有治疗前景。通过严格的质量控制和验证流程,我们的研究为这些可药用靶点提供了令人信服的证据,这些靶点可通过开发新型药物或重新利用现有药物来改善临床预后。
{"title":"Genetically Supported Drug Targets and Dental Traits: A Mendelian Randomization Study.","authors":"L Liu, T Wang, C Duan, S Mao, B Wu, Y Chen, D Huang, Y Cao","doi":"10.1177/00220345241272045","DOIUrl":"10.1177/00220345241272045","url":null,"abstract":"<p><p>Current interventions for oral/dental diseases heavily rely on operative/surgical procedures, while the discovery of novel drug targets may enable access to noninvasive pharmacotherapy. Therefore, this study aims to leverage large-scale data and Mendelian randomization (MR) techniques, utilizing genetic variants as instruments, to identify potential therapeutic targets for oral and dental diseases supported by genetic evidence. By intersecting 4,302 druggable genes with expression quantitative trait loci from 31,684 blood samples, we identified 2,580 druggable targets as exposures. Single nucleotide polymorphisms associated with dental disease/symptom traits were collected from FinnGen R9, the Gene-Lifestyle Interactions in Dental Endpoints consortium, and the UK Biobank to serve as outcomes for both discovery and replication purposes. Through MR analysis, we identified 43 druggable targets for various dental disease/symptom traits. To evaluate the viability of these targets, we replicated the analysis using circulating protein quantitative trait loci as exposures. Additionally, we conducted sensitivity, colocalization, Gene Ontology/Kyoto Encyclopedia of Genes and Genomes annotation, protein-protein interaction analyses, and validated dental trait-associated druggable gene expression in animal models. Among these targets, <i>IL12RB1</i> (odds ratio [OR], 1.01; 95% confidence interval [CI], 1.01-1.01) and <i>TNF</i> (OR, 0.98; 95% CI, 0.97-0.99) exhibited therapeutic promise for oral ulcers, whereas <i>CXCL10</i> (OR, 0.84; 95% CI, 0.76-0.91) was for periodontitis. Through a rigorous quality control and validation pipeline, our study yields compelling evidence for these druggable targets, which may enhance the clinical prognosis by developing novel drugs or repurposing existing ones.</p>","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1271-1280"},"PeriodicalIF":5.9,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11653268/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142383008","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Therapeutic Use of Dental Mesenchymal Stem Cells in Human Clinical Trials. 牙间质干细胞在人类临床试验中的治疗用途。
Pub Date : 2024-11-01 Epub Date: 2024-10-06 DOI: 10.1177/00220345241261900
S Ivanovski, P Han, O A Peters, M Sanz, P M Bartold

Mesenchymal stem cells (MSCs), characterized by their undifferentiated and multipotent nature, can be derived from various sources, including bone marrow, adipose, and dental tissues. Among these, dental MSCs (DSCs) exhibit universal MSC characteristics and are attracting considerable attention for regenerating oral and craniofacial tissues. This review provides a contemporary overview of recently published clinical studies using DSCs for various orodental and maxillofacial regenerative applications, including bone, periodontal, and endodontic regeneration. It also explores the utilization of DSCs in treating systemic conditions, exemplified by their application in managing conditions such as COVID-19 and osteoarthritis. The available evidence underscores the potential of DSCs and their secretome as efficacious tools in regenerative medicine for both dental and nondental clinical applications, supporting the continued promise of stem cell-based therapies. It is nevertheless evident that there are a number of important challenges that restrict the widespread utilization of DSCs, namely, difficulty in standardizing autologous preparations, insufficient cell surface marker characterization, high production costs, and regulatory compliance requirements. Further, the unique requirements of dental applications, especially complex structures such as the periodontium, where temporospatial control over the healing process is required, necessitate the combination of stem cells with appropriate scaffolds according to the principles of tissue engineering. There is currently insufficient evidence to support the clinical translation of DSCs into clinical practice, and phase 3 clinical trials with standardized protocols for cell sourcing, propagation, dosing, and delivery are required to move the field forward. In summary, this review provides a contemporary overview of the evolving landscape of stem cell therapy, offering insights into the latest developments and trends as well as the challenges that need to be addressed for the widespread application of DSC-based cell therapies.

间充质干细胞(MSCs)具有未分化和多潜能的特点,可从骨髓、脂肪和牙科组织等各种来源获得。其中,牙科间充质干细胞(DSCs)具有间充质干细胞的普遍特征,在再生口腔和颅面组织方面备受关注。本综述概述了近期发表的将 DSCs 用于各种口腔和颌面部再生应用(包括骨、牙周和牙髓再生)的临床研究。报告还探讨了利用 DSCs 治疗全身性疾病的情况,例如 DSCs 在治疗 COVID-19 和骨关节炎等疾病中的应用。现有证据强调了DSCs及其分泌组作为再生医学有效工具在牙科和非牙科临床应用中的潜力,支持了干细胞疗法的持续前景。然而,很明显,有一些重要的挑战限制了干细胞的广泛应用,即自体制备难以标准化、细胞表面标记表征不足、生产成本高以及监管合规要求。此外,牙科应用的独特要求,特别是牙周等复杂结构,需要对愈合过程进行时间空间控制,因此必须根据组织工程学原理,将干细胞与适当的支架相结合。目前还没有足够的证据支持将干细胞转化为临床实践,需要进行第三阶段临床试验,并制定细胞来源、繁殖、剂量和输送的标准化方案,以推动该领域的发展。总之,这篇综述概述了干细胞疗法不断发展的现状,深入分析了最新的发展和趋势,以及广泛应用以DSC为基础的细胞疗法需要应对的挑战。
{"title":"The Therapeutic Use of Dental Mesenchymal Stem Cells in Human Clinical Trials.","authors":"S Ivanovski, P Han, O A Peters, M Sanz, P M Bartold","doi":"10.1177/00220345241261900","DOIUrl":"10.1177/00220345241261900","url":null,"abstract":"<p><p>Mesenchymal stem cells (MSCs), characterized by their undifferentiated and multipotent nature, can be derived from various sources, including bone marrow, adipose, and dental tissues. Among these, dental MSCs (DSCs) exhibit universal MSC characteristics and are attracting considerable attention for regenerating oral and craniofacial tissues. This review provides a contemporary overview of recently published clinical studies using DSCs for various orodental and maxillofacial regenerative applications, including bone, periodontal, and endodontic regeneration. It also explores the utilization of DSCs in treating systemic conditions, exemplified by their application in managing conditions such as COVID-19 and osteoarthritis. The available evidence underscores the potential of DSCs and their secretome as efficacious tools in regenerative medicine for both dental and nondental clinical applications, supporting the continued promise of stem cell-based therapies. It is nevertheless evident that there are a number of important challenges that restrict the widespread utilization of DSCs, namely, difficulty in standardizing autologous preparations, insufficient cell surface marker characterization, high production costs, and regulatory compliance requirements. Further, the unique requirements of dental applications, especially complex structures such as the periodontium, where temporospatial control over the healing process is required, necessitate the combination of stem cells with appropriate scaffolds according to the principles of tissue engineering. There is currently insufficient evidence to support the clinical translation of DSCs into clinical practice, and phase 3 clinical trials with standardized protocols for cell sourcing, propagation, dosing, and delivery are required to move the field forward. In summary, this review provides a contemporary overview of the evolving landscape of stem cell therapy, offering insights into the latest developments and trends as well as the challenges that need to be addressed for the widespread application of DSC-based cell therapies.</p>","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1173-1184"},"PeriodicalIF":0.0,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11562285/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142383010","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A Deep Learning System to Predict Epithelial Dysplasia in Oral Leukoplakia. 预测口腔白斑病上皮发育不良的深度学习系统
IF 5.9 Pub Date : 2024-11-01 Epub Date: 2024-10-09 DOI: 10.1177/00220345241272048
J Adeoye, A Chaurasia, A Akinshipo, I K Suleiman, L-W Zheng, A W I Lo, J J Pu, S Bello, F O Oginni, E T Agho, R O Braimah, Y X Su

Oral leukoplakia (OL) has an inherent disposition to develop oral cancer. OL with epithelial dysplasia (OED) is significantly likely to undergo malignant transformation; however, routine OED assessment is invasive and challenging. This study investigated whether a deep learning (DL) model can predict dysplasia probability among patients with leukoplakia using oral photographs. In addition, we assessed the performance of the DL model in comparison with clinicians' ratings and in providing decision support on dysplasia assessment. Retrospective images of leukoplakia taken before biopsy/histopathology were obtained to construct the DL model (n = 2,073). OED status following histopathology was used as the gold standard for all images. We first developed, fine-tuned, and internally validated a DL architecture with an EfficientNet-B2 backbone that outputs the predicted probability of OED, OED status, and regions-of-interest heat maps. Then, we tested the performance of the DL model on a temporal cohort before geographical validation. We also assessed the model's performance at external validation with opinions provided by human raters on OED status. Performance evaluation included discrimination, calibration, and potential net benefit. The DL model achieved good Brier scores, areas under the curve, and balanced accuracies of 0.124 (0.079-0.169), 0.882 (0.838-0.926), and 81.8% (76.5-87.1) at testing and 0.146 (0.112-0.18), 0.828 (0.792-0.864), and 76.4% (72.3-80.5) at external validation, respectively. In addition, the model had a higher potential net benefit in selecting patients with OL for biopsy/histopathology during OED assessment than when biopsies were performed for all patients. External validation also showed that the DL model had better accuracy than 92.3% (24/26) of human raters in classifying the OED status of leukoplakia from oral images (balanced accuracy: 54.8%-79.7%). Overall, the photograph-based intelligent model can predict OED probability and status in leukoplakia with good calibration and discrimination, which shows potential for decision support to select patients for biopsy/histopathology, obviate unnecessary biopsy, and assist in patient self-monitoring.

口腔白斑病(OL)具有发展成口腔癌的固有倾向。上皮发育不良(OED)的口腔白斑发生恶性转化的可能性很大;然而,常规的 OED 评估具有侵入性和挑战性。本研究探讨了深度学习(DL)模型能否利用口腔照片预测白斑病患者的发育不良概率。此外,我们还评估了深度学习模型与临床医生评分的比较以及在提供发育不良评估决策支持方面的性能。我们获取了活检/组织病理学检查前拍摄的白斑病回顾性图像来构建 DL 模型(n = 2,073)。组织病理学检查后的 OED 状态被用作所有图像的金标准。我们首先开发、微调并在内部验证了带有 EfficientNet-B2 主干网的 DL 架构,该架构可输出 OED 预测概率、OED 状态和感兴趣区热图。然后,我们在地理验证之前,在一个时间群组上测试了 DL 模型的性能。我们还利用人类评分者提供的关于 OED 状态的意见评估了该模型的外部验证性能。性能评估包括判别、校准和潜在净效益。DL 模型的 Brier 分数、曲线下面积和平衡准确度都很高,测试结果分别为 0.124 (0.079-0.169)、0.882 (0.838-0.926) 和 81.8% (76.5-87.1),外部验证结果分别为 0.146 (0.112-0.18)、0.828 (0.792-0.864) 和 76.4% (72.3-80.5)。此外,与对所有患者进行活检相比,该模型在OED评估期间选择OL患者进行活检/组织病理学检查的潜在净收益更高。外部验证还表明,在根据口腔图像对白斑病的 OED 状态进行分类时,DL 模型的准确率高于 92.3%(24/26)的人类评分员(平衡准确率:54.8%-79.7%)。总之,基于照片的智能模型可以预测白斑病的 OED 概率和状态,并具有良好的校准和辨别能力,在选择患者进行活检/组织病理学检查、避免不必要的活检以及协助患者进行自我监测等方面具有决策支持的潜力。
{"title":"A Deep Learning System to Predict Epithelial Dysplasia in Oral Leukoplakia.","authors":"J Adeoye, A Chaurasia, A Akinshipo, I K Suleiman, L-W Zheng, A W I Lo, J J Pu, S Bello, F O Oginni, E T Agho, R O Braimah, Y X Su","doi":"10.1177/00220345241272048","DOIUrl":"10.1177/00220345241272048","url":null,"abstract":"<p><p>Oral leukoplakia (OL) has an inherent disposition to develop oral cancer. OL with epithelial dysplasia (OED) is significantly likely to undergo malignant transformation; however, routine OED assessment is invasive and challenging. This study investigated whether a deep learning (DL) model can predict dysplasia probability among patients with leukoplakia using oral photographs. In addition, we assessed the performance of the DL model in comparison with clinicians' ratings and in providing decision support on dysplasia assessment. Retrospective images of leukoplakia taken before biopsy/histopathology were obtained to construct the DL model (<i>n</i> = 2,073). OED status following histopathology was used as the gold standard for all images. We first developed, fine-tuned, and internally validated a DL architecture with an EfficientNet-B2 backbone that outputs the predicted probability of OED, OED status, and regions-of-interest heat maps. Then, we tested the performance of the DL model on a temporal cohort before geographical validation. We also assessed the model's performance at external validation with opinions provided by human raters on OED status. Performance evaluation included discrimination, calibration, and potential net benefit. The DL model achieved good Brier scores, areas under the curve, and balanced accuracies of 0.124 (0.079-0.169), 0.882 (0.838-0.926), and 81.8% (76.5-87.1) at testing and 0.146 (0.112-0.18), 0.828 (0.792-0.864), and 76.4% (72.3-80.5) at external validation, respectively. In addition, the model had a higher potential net benefit in selecting patients with OL for biopsy/histopathology during OED assessment than when biopsies were performed for all patients. External validation also showed that the DL model had better accuracy than 92.3% (24/26) of human raters in classifying the OED status of leukoplakia from oral images (balanced accuracy: 54.8%-79.7%). Overall, the photograph-based intelligent model can predict OED probability and status in leukoplakia with good calibration and discrimination, which shows potential for decision support to select patients for biopsy/histopathology, obviate unnecessary biopsy, and assist in patient self-monitoring.</p>","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1218-1226"},"PeriodicalIF":5.9,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11653265/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142396337","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Oral Health Research in the WHO African Region between 2011 and 2022: A Scoping Review. 2011 至 2022 年世界卫生组织非洲地区口腔健康研究:范围界定审查。
Pub Date : 2024-11-01 Epub Date: 2024-10-29 DOI: 10.1177/00220345241272024
T F Labarca, D Ortuño, L Neira, G Andrade, F J Bravo, C R Cantarutti, M Dallaserra, A Gatarayiha, J Karajgikar, R J Kulchar, X Liu, C C Martins-Pfeifer, N Olivares, L Pilcher, S Pahlke, C Pirela, J M Sanchez, A Song, O Urquhart, J P Vargas, C Véliz, F Verdugo-Paiva, P Vergara, V Zaffiri, J Zuñiga, Y Makino, M Glick, A Carrasco-Labra

The status of oral health research in the World Health Organization (WHO) African region is unclear, yet the need for such information is central to moving an oral health agenda forward. Such an agenda is essential for effectively translating research into actionable practices and supporting regional strategies. The aim of this scoping review was to provide data on the scope and output of oral health research in the WHO African region to be used as a starting point for establishing a research agenda that can affect oral health in the region. We conducted a systematic search in PubMed; EMBASE; Epistemonikos; Scopus; the International Association for Dental, Oral, and Craniofacial Research General and Regional Sessions; ProQUEST; PROSPERO; and African regional databases such as Regional African Index Medicus and the African Journal Online. We included primary and secondary studies published in English, French, or Portuguese between January 1, 2011, and December 31, 2022, addressing oral health-related research having individuals, groups, or populations as units of analysis. These reports either addressed a topic relevant to the WHO African region assessed using the title and study objective or were conducted in a country in the region. We excluded in vitro and in vivo studies focusing on cells, biomarkers, or animals. We assessed 24,014 records, and 1,379 proved eligible. Our findings indicate a preference for particular research designs less suitable for evidence-informed practice guidelines and oral policies, a limited scope of oral health research topics, and important regional differences in research capacity. Furthermore, publications by researchers in the WHO African region tend to be published in journals with a limited readership. A discussion of our findings among oral health researchers at academic institutions in the WHO African region on how to create within- and across-country collaborations could potentially improve both health and oral health in the region.

世界卫生组织(WHO)非洲地区的口腔健康研究状况尚不清楚,但需要此类信息对于推进口腔健康议程至关重要。这种议程对于有效地将研究成果转化为可操作的实践和支持区域战略至关重要。本次范围界定综述的目的是提供世界卫生组织非洲地区口腔健康研究的范围和成果数据,并以此为起点制定能够影响该地区口腔健康的研究议程。我们在 PubMed、EMBASE、Epistemonikos、Scopus、国际牙科、口腔和颅面研究协会大会和地区会议、ProQUEST、PROSPERO 以及非洲地区 Index Medicus 和非洲期刊在线等非洲地区数据库中进行了系统检索。我们收录了 2011 年 1 月 1 日至 2022 年 12 月 31 日期间以英语、法语或葡萄牙语发表的主要和次要研究报告,这些报告涉及以个人、群体或人口为分析单位的口腔健康相关研究。这些报告要么涉及与世界卫生组织非洲地区相关的主题,使用标题和研究目标进行评估,要么是在该地区的某个国家进行的。我们排除了以细胞、生物标记物或动物为重点的体外和体内研究。我们评估了 24,014 条记录,其中 1,379 条符合条件。我们的研究结果表明,人们更倾向于特定的研究设计,而不太适合循证实践指南和口腔政策,口腔健康研究课题的范围有限,而且研究能力存在重大地区差异。此外,世卫组织非洲地区研究人员的出版物往往发表在读者群有限的期刊上。世界卫生组织非洲地区学术机构的口腔健康研究人员就我们的研究结果展开讨论,探讨如何建立国家内部和国家之间的合作,这有可能改善该地区的卫生和口腔健康状况。
{"title":"Oral Health Research in the WHO African Region between 2011 and 2022: A Scoping Review.","authors":"T F Labarca, D Ortuño, L Neira, G Andrade, F J Bravo, C R Cantarutti, M Dallaserra, A Gatarayiha, J Karajgikar, R J Kulchar, X Liu, C C Martins-Pfeifer, N Olivares, L Pilcher, S Pahlke, C Pirela, J M Sanchez, A Song, O Urquhart, J P Vargas, C Véliz, F Verdugo-Paiva, P Vergara, V Zaffiri, J Zuñiga, Y Makino, M Glick, A Carrasco-Labra","doi":"10.1177/00220345241272024","DOIUrl":"10.1177/00220345241272024","url":null,"abstract":"<p><p>The status of oral health research in the World Health Organization (WHO) African region is unclear, yet the need for such information is central to moving an oral health agenda forward. Such an agenda is essential for effectively translating research into actionable practices and supporting regional strategies. The aim of this scoping review was to provide data on the scope and output of oral health research in the WHO African region to be used as a starting point for establishing a research agenda that can affect oral health in the region. We conducted a systematic search in PubMed; EMBASE; Epistemonikos; Scopus; the International Association for Dental, Oral, and Craniofacial Research General and Regional Sessions; ProQUEST; PROSPERO; and African regional databases such as Regional African Index Medicus and the African Journal Online. We included primary and secondary studies published in English, French, or Portuguese between January 1, 2011, and December 31, 2022, addressing oral health-related research having individuals, groups, or populations as units of analysis. These reports either addressed a topic relevant to the WHO African region assessed using the title and study objective or were conducted in a country in the region. We excluded in vitro and in vivo studies focusing on cells, biomarkers, or animals. We assessed 24,014 records, and 1,379 proved eligible. Our findings indicate a preference for particular research designs less suitable for evidence-informed practice guidelines and oral policies, a limited scope of oral health research topics, and important regional differences in research capacity. Furthermore, publications by researchers in the WHO African region tend to be published in journals with a limited readership. A discussion of our findings among oral health researchers at academic institutions in the WHO African region on how to create within- and across-country collaborations could potentially improve both health and oral health in the region.</p>","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1209-1217"},"PeriodicalIF":0.0,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11562290/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142523968","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ALKBH5 Regulates Osteogenic Differentiation via the lncRNA/mRNA Complex. ALKBH5通过lncRNA/mRNA复合物调控成骨细胞分化
IF 5.9 Pub Date : 2024-10-01 Epub Date: 2024-09-23 DOI: 10.1177/00220345241266775
Y Song, H Gao, Y Pan, Y Gu, W Sun, Y Wang, J Liu

Human adipose-derived stem cells (hASCs) are commonly used in bone tissue regeneration. The N6-methyladenosine (m6A) modification has emerged as a novel regulatory mechanism for gene expression, playing a critical role in osteogenic differentiation of stem cells. However, the precise role and mechanism of alkylation repair homolog 5 (ALKBH5) in hASC osteogenesis remain incompletely elucidated and warrant further investigation. Herein, we employed methylated RNA immunoprecipitation sequencing, RNA sequencing, and weighted gene coexpression network analysis to identify a key long noncoding RNA (lncRNA) in hASCs: lncRNA AK311120. Functional experiments demonstrated that lnc-AK311120 promoted the osteogenic differentiation of hASCs, while a mutation at the m6A central site A of lnc-AK311120 was found to decrease the level of m6A modification. The osteogenic effect of ALKBH5 was confirmed both in vitro and in vivo using a mandibular defect model in nude mice. Subsequent investigations revealed that knockdown of ALKBH5 resulted in a significant increase in the m6A modification level of lnc-AK311120, accompanied by a downregulation in the expression level of lnc-AK311120. Additional rescue experiments demonstrated that overexpression of lnc-AK311120 could restore the phenotype after ALKBH5 knockdown. We observed that AK311120 interacted with the RNA-binding proteins DExH-Box helicase 9 (DHX9) and YTH domain containing 2 (YTHDC2) to form a ternary complex, while mitogen-activated protein kinase kinase 7 (MAP2K7) served as the shared downstream target gene of DHX9 and YTHDC2. Knockdown of AK311120 led to a reduction in the binding affinity between DHX9/YTHDC2 and the target gene MAP2K7. Furthermore, ALKBH5 facilitated the translation of MAP2K7 and activated the downstream JNK signaling pathway through the AK311120-DHX9-YTHDC2 complex, without affecting its messenger RNA level. Collectively, we have investigated the regulatory effect and mechanism of ALKBH5-mediated demethylation of lncRNA in hASC osteogenesis for the first time, offering a promising approach for bone tissue engineering.

人脂肪源性干细胞(hASCs)常用于骨组织再生。N6-甲基腺苷(m6A)修饰已成为一种新的基因表达调控机制,在干细胞成骨分化过程中发挥着关键作用。然而,烷基化修复同源物5(ALKBH5)在hASC成骨过程中的确切作用和机制仍未完全阐明,值得进一步研究。在此,我们采用甲基化RNA免疫沉淀测序、RNA测序和加权基因共表达网络分析等方法,鉴定了hASCs中的一个关键长非编码RNA(lncRNA):lncRNA AK311120。功能实验证明,lnc-AK311120能促进hASCs的成骨分化,而lnc-AK311120的m6A中心位点A发生突变会降低m6A修饰水平。ALKBH5的成骨作用在体外和裸鼠下颌骨缺损模型中都得到了证实。随后的研究发现,敲除ALKBH5会导致lnc-AK311120的m6A修饰水平显著增加,同时lnc-AK311120的表达水平下调。额外的拯救实验表明,过表达lnc-AK311120可以恢复ALKBH5敲除后的表型。我们观察到,AK311120与RNA结合蛋白DExH-Box螺旋酶9(DHX9)和含YTH结构域的2(YTHDC2)相互作用形成三元复合物,而丝裂原活化蛋白激酶激酶7(MAP2K7)是DHX9和YTHDC2的共同下游靶基因。敲除 AK311120 会降低 DHX9/YTHDC2 与靶基因 MAP2K7 的结合亲和力。此外,ALKBH5 促进了 MAP2K7 的翻译,并通过 AK311120-DHX9-YTHDC2 复合物激活了下游的 JNK 信号通路,而不影响其信使 RNA 水平。综上所述,我们首次研究了ALKBH5介导的lncRNA去甲基化在hASC成骨过程中的调控作用和机制,为骨组织工程提供了一种前景广阔的方法。
{"title":"ALKBH5 Regulates Osteogenic Differentiation via the lncRNA/mRNA Complex.","authors":"Y Song, H Gao, Y Pan, Y Gu, W Sun, Y Wang, J Liu","doi":"10.1177/00220345241266775","DOIUrl":"10.1177/00220345241266775","url":null,"abstract":"<p><p>Human adipose-derived stem cells (hASCs) are commonly used in bone tissue regeneration. The N6-methyladenosine (m<sup>6</sup>A) modification has emerged as a novel regulatory mechanism for gene expression, playing a critical role in osteogenic differentiation of stem cells. However, the precise role and mechanism of alkylation repair homolog 5 (ALKBH5) in hASC osteogenesis remain incompletely elucidated and warrant further investigation. Herein, we employed methylated RNA immunoprecipitation sequencing, RNA sequencing, and weighted gene coexpression network analysis to identify a key long noncoding RNA (lncRNA) in hASCs: lncRNA AK311120. Functional experiments demonstrated that lnc-AK311120 promoted the osteogenic differentiation of hASCs, while a mutation at the m<sup>6</sup>A central site A of lnc-AK311120 was found to decrease the level of m<sup>6</sup>A modification. The osteogenic effect of ALKBH5 was confirmed both in vitro and in vivo using a mandibular defect model in nude mice. Subsequent investigations revealed that knockdown of ALKBH5 resulted in a significant increase in the m<sup>6</sup>A modification level of lnc-AK311120, accompanied by a downregulation in the expression level of lnc-AK311120. Additional rescue experiments demonstrated that overexpression of lnc-AK311120 could restore the phenotype after ALKBH5 knockdown. We observed that AK311120 interacted with the RNA-binding proteins DExH-Box helicase 9 (DHX9) and YTH domain containing 2 (YTHDC2) to form a ternary complex, while mitogen-activated protein kinase kinase 7 (MAP2K7) served as the shared downstream target gene of DHX9 and YTHDC2. Knockdown of AK311120 led to a reduction in the binding affinity between DHX9/YTHDC2 and the target gene MAP2K7. Furthermore, ALKBH5 facilitated the translation of MAP2K7 and activated the downstream JNK signaling pathway through the AK311120-DHX9-YTHDC2 complex, without affecting its messenger RNA level. Collectively, we have investigated the regulatory effect and mechanism of ALKBH5-mediated demethylation of lncRNA in hASC osteogenesis for the first time, offering a promising approach for bone tissue engineering.</p>","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1119-1129"},"PeriodicalIF":5.9,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11653282/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142304932","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Letter to the Editor, "Sjögren's Disease Is Not a Clinical Risk Factor for Periodontitis". 致编辑的信,《斯约格伦病不是牙周炎的临床风险因素》。
IF 5.9 Pub Date : 2024-10-01 Epub Date: 2024-09-29 DOI: 10.1177/00220345241256583
A Vissink, D J Jager, F Maarse, H Brand
{"title":"Letter to the Editor, \"Sjögren's Disease Is Not a Clinical Risk Factor for Periodontitis\".","authors":"A Vissink, D J Jager, F Maarse, H Brand","doi":"10.1177/00220345241256583","DOIUrl":"10.1177/00220345241256583","url":null,"abstract":"","PeriodicalId":94075,"journal":{"name":"Journal of dental research","volume":" ","pages":"1153"},"PeriodicalIF":5.9,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11653347/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141201669","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of dental research
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1