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Gene detection of VDR BsmI locus and its approteins, genes and growthplication in rational drug use in patients with osteoporosis. VDR BsmI 位点的基因检测及其在骨质疏松症患者合理用药中的作用。
Pub Date : 2024-01-01 Epub Date: 2024-06-21 DOI: 10.1080/17410541.2024.2366152
Yu Huang, Nan Qiu, Yunna Wang, Wanjun Ouyang, Miao Liang

Aim: This paper determines the polymorphism distribution of the VDR BsmI gene in 350 patients and provides medication recommendations for osteoporosis based on detection results. Materials & methods: Chi-square tests compared genotype and allele frequencies with other populations. Results: Genotype frequencies were 91.66 bb, 8.72 Bb and 0.21% BB, with allelic frequencies of 95.43 b and 4.57% B, adhering to Hardy-Weinberg equilibrium. These findings suggest that VDR gene polymorphisms, particularly at the BsmIlocus, play an essential role in bone health and osteoporosis treatment. Genotype-based drug selection reduced adverse reactions from 14 to two cases. Conclusion: These findings improve clinical treatment efficacy and guide rational drug use for osteoporosis patients.

目的:本文测定 350 例患者 VDR BsmI 基因的多态性分布,并根据检测结果提供骨质疏松症的用药建议。材料与方法:将基因型和等位基因频率与其他人群进行卡方检验。结果:基因型频率为 91.66 bsmI:基因型频率为 91.66 bb、8.72 Bb 和 0.21% BB,等位基因频率为 95.43 b 和 4.57% B,符合哈代-温伯格平衡。这些发现表明,VDR 基因多态性,尤其是 BsmIlocus 处的多态性,在骨骼健康和骨质疏松症治疗中发挥着重要作用。基于基因型的药物选择将不良反应从 14 例减少到 2 例。结论这些发现提高了临床治疗效果,指导骨质疏松症患者合理用药。
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引用次数: 0
Classification and immunotherapy assessment of lung adenocarcinoma based on coagulation-related genes. 基于凝血相关基因的肺腺癌分类及免疫治疗评估。
Pub Date : 2024-01-01 Epub Date: 2023-12-01 DOI: 10.2217/pme-2023-0094
Yi Zhou, Wangju Fan, Jian Zhou, Shengjie Zhong, Jun Yang, Yanxia Zhong, Guoxiong Huang

Introduction: This study on lung adenocarcinoma (LUAD), a common lung cancer subtype with high mortality. Aims: This study focuses on how tumor cell interactions affect immunotherapy responsiveness. Methods: Using public databases, we used non-negative matrix factorization clustering method, ssGSEA, CIBERSORT algorithm, immunophenotype score, survival analysis, protein-protein interaction network method to analyze gene expression data and coagulation-related genes. Results: We divided LUAD patients into three coagulation-related subgroups with varying immune characteristics and survival rates. A cluster of three patients, having the highest immune infiltration and survival rate, also showed the most potential for immunotherapy. We identified five key genes influencing patient survival using a protein-protein interaction network. Conclusion: This research offers valuable insights for forecasting prognosis and immunotherapy responsiveness in LUAD patients, helping to inform clinical treatment strategies.

肺腺癌(LUAD)是一种常见的高死亡率的肺癌亚型。目的:本研究关注肿瘤细胞相互作用如何影响免疫治疗反应性。方法:利用公共数据库,采用非负矩阵分解聚类法、ssGSEA、CIBERSORT算法、免疫表型评分、生存分析、蛋白-蛋白相互作用网络法对基因表达数据和凝血相关基因进行分析。结果:我们将LUAD患者分为三个与凝血相关的亚组,这些亚组具有不同的免疫特征和生存率。一组3例患者的免疫浸润和生存率最高,也显示出免疫治疗的最大潜力。我们使用蛋白质-蛋白质相互作用网络确定了影响患者生存的五个关键基因。结论:本研究为预测LUAD患者的预后和免疫治疗反应性提供了有价值的见解,有助于指导临床治疗策略。
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引用次数: 0
The roots of (in)equity in precision medicine: gaps in the discourse. 精准医疗(不)公平的根源:话语中的差距。
Pub Date : 2024-01-01 Epub Date: 2023-12-13 DOI: 10.2217/pme-2023-0097
Sara Green, Barbara Prainsack, Maya Sabatello
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引用次数: 0
Recent advances in personalized cancer immunotherapy with immune checkpoint inhibitors, T cells and vaccines. 利用免疫检查点抑制剂、T 细胞和疫苗进行个性化癌症免疫疗法的最新进展。
Pub Date : 2024-01-01 Epub Date: 2023-12-13 DOI: 10.2217/pme-2023-0054
Elnaz Faghfuri

The results of genomic and molecular profiling of cancer patients can be effectively applied to immunotherapy agents, including immune checkpoint inhibitors, to select the most appropriate treatment. In addition, accurate prediction of neoantigens facilitates the development of individualized cancer vaccines and T-cell therapy. This review summarizes the biomarker(s) predicting responses to immune checkpoint inhibitors and focuses on current strategies to identify and isolate neoantigen-reactive T cells as well as the clinical development of neoantigen-based therapeutics. The results suggest that maximal T-cell stimulation and expansion can be achieved with combination therapies that enhance antigen-presenting cells' function and optimal T-cell priming in lymph nodes.

癌症患者的基因组和分子图谱分析结果可有效应用于免疫疗法药物,包括免疫检查点抑制剂(ICI),以选择最合适的治疗方法。此外,准确预测新抗原也有助于开发个体化癌症疫苗和 T 细胞疗法。本综述总结了预测对 ICIs 反应的生物标志物,并重点介绍了目前识别和分离新抗原反应 T 细胞的策略以及基于新抗原疗法的临床开发。研究结果表明,通过增强抗原递呈细胞功能和淋巴结中最佳T细胞引物的联合疗法,可以实现最大程度的T细胞刺激和扩增。
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引用次数: 0
Lung cancer, platinum analog-based frontline treatment and pharmacogenetic limitations. 肺癌、以铂类药物为基础的一线治疗和药物遗传学限制。
Pub Date : 2024-01-01 Epub Date: 2024-11-19 DOI: 10.1080/17410541.2024.2391269
Maryam Saqib, Zari Salahud Din, Sehrish Zafar, Nayla Munawar, Rukhsana Nawaz, Sagheer Ahmed, Mohammad Hamid Hamdard

Lung cancer has the highest mortality rate among all the highly prevalent neoplasia globally. The major concern with its frontline treatment-cisplatin, is the rapid progression of chemoresistance and multi-organ-based toxicities including hearing loss and tinnitus, nephrotoxicity, hepatotoxicity and myelosuppression including anemia and neutropenia. In this review, studies concluding the association of single nucleotide polymorphisms (SNP) in disparate genes with aforementioned toxicity points are summarized to observe the pharmacogenomic pattern. Especially, SNPs in ATP7B, ERCC-1, ERCC-2, MATE-1, OCT-2, ABCB-1, ABCC-1, ABCG-2, ABCC-2, SLC22A, ERCC-5, BRCA-1, GSTM-3, GSTM-4 and GSTM-5 genes appear to be associated with the therapeutic response and/or adverse effects of cisplatin. We recommend utilizing this information to minimize the risk of treatment failure due to chemoresistance and adverse effects on other organs.

在全球所有高发肿瘤中,肺癌的死亡率最高。其一线治疗药物--顺铂的主要问题是化疗耐药性的快速发展和多器官毒性,包括听力下降和耳鸣、肾毒性、肝毒性和骨髓抑制(包括贫血和中性粒细胞减少)。本综述总结了不同基因中单核苷酸多态性(SNP)与上述毒性点相关的研究,以观察药物基因组学模式。特别是 ATP7B、ERCC-1、ERCC-2、MATE-1、OCT-2、ABCB-1、ABCC-1、ABCG-2、ABCC-2、SLC22A、ERCC-5、BRCA-1、GSTM-3、GSTM-4 和 GSTM-5 基因中的 SNP 似乎与顺铂的治疗反应和/或不良反应有关。我们建议利用这些信息最大限度地降低因化疗耐药性和对其他器官的不良影响而导致治疗失败的风险。
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引用次数: 0
The effect of RNLS gene polymorphisms on preeclampsia susceptibility: a meta-analysis study. RNLS基因多态性对子痫前期易感性的影响:一项荟萃分析研究。
Pub Date : 2024-01-01 Epub Date: 2024-05-28 DOI: 10.1080/17410541.2024.2341608
Saeedeh Salimi, Abbas Mohammadpour-Gharehbagh, Mohaddeseh Hedayat, Hamidreza Galavi, Mahdiyeh Harati-Sadegh

Aim: The authors designed a meta-analysis to find a comprehensive result of the impact of RNLS polymorphisms on preeclampsia (PE) susceptibility. Methods: The online databases PubMed, Scopus, and Google Scholar were employed for the purpose of literature search. Data analysis was conducted using STATA (ver. 12.0) and MetaGenyo web tool. Results: The findings showed that the RNLS rs10887800 polymorphism could increase risk of PE in allelic, codominant heterozygous and dominant genetic models. In addition, the analysis indicated that the RNLS rs2576178 polymorphism was associated with higher risk of PE in allelic, codominant homozygous, dominant, and recessive models. Conclusion: The findings of meta-analysis showed that the RNLS rs10887800 and rs2576178 polymorphisms could increase risk of PE in several genetic models.

目的:作者设计了一项荟萃分析,以全面了解 RNLS 多态性对子痫前期(PE)易感性的影响。研究方法采用在线数据库 PubMed、Scopus 和 Google Scholar 进行文献检索。使用 STATA(12.0 版)和 MetaGenyo 网络工具进行数据分析。结果研究结果表明,RNLS rs10887800 多态性在等位基因、共显性杂合子和显性遗传模型中可增加 PE 的风险。此外,分析表明,RNLS rs2576178 多态性在等位基因、显性同卵、显性和隐性遗传模型中与 PE 的高风险相关。结论荟萃分析结果表明,RNLS rs10887800 和 rs2576178 多态性可在多种遗传模型中增加 PE 风险。
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引用次数: 0
Assessment of ADRB1 polymorphism in patients with acute coronary syndrome treated with ticagrelor and aspirin. 评估接受替卡格雷和阿司匹林治疗的急性冠状动脉综合征患者的 ADRB1 多态性。
Pub Date : 2024-01-01 Epub Date: 2024-04-29 DOI: 10.2217/pme-2024-0004
Xiang Zhang, Qi Yuan, Dawei Zhang

Background: This study investigated the influence of ADRB1 gene rs1801253 polymorphism on the treatment response of ticagrelor and aspirin in patients with acute coronary syndrome (ACS). Methods: Genetic typing was detected by Sanger sequencing. Platelet inhibition was assessed using thromboelastography. Kaplan-Meier and Cox regression were applied for prognosis analysis. Results: Out of 200 participants, 94 cases with rs1801253-CC genotype and 106 cases with CG+GG genotype were found. There was no significant difference between the rs1801253-CC and CG+GG groups in the number of ST-segment elevation myocardial infarction, non-ST-segment elevation myocardial infarction and unstable angina patients. There was no statistical difference in the basic data of patients in the two groups in terms of age, sex, medical history and medicine use in the dominant model. The rs1801253-CC genotype was a risk prognostic factor for ACS patients based on the Cox regression analysis results. Conclusion: Detecting ADRB1 polymorphism is crucial for ACS patients undergoing treatment with ticagrelor and aspirin.

研究背景本研究探讨了 ADRB1 基因 rs1801253 多态性对急性冠状动脉综合征(ACS)患者服用替卡格雷和阿司匹林治疗反应的影响。研究方法通过桑格测序检测基因分型。使用血栓弹力图评估血小板抑制作用。采用 Kaplan-Meier 和 Cox 回归进行预后分析。结果在 200 名参与者中,发现 94 例 rs1801253-CC 基因型和 106 例 CG+GG 基因型。rs1801253-CC组和CG+GG组在ST段抬高型心肌梗死、非ST段抬高型心肌梗死和不稳定型心绞痛患者人数上无明显差异。在显性模型中,两组患者在年龄、性别、病史和用药方面的基本数据无统计学差异。根据 Cox 回归分析结果,rs1801253-CC 基因型是 ACS 患者的风险预后因素。结论检测 ADRB1 多态性对接受替卡格雷和阿司匹林治疗的 ACS 患者至关重要。
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引用次数: 0
Precision medicine activities and opportunities for shaping maternal and neonatal health in Qatar. 精准医疗活动和机遇,促进卡塔尔孕产妇和新生儿健康。
Pub Date : 2024-01-01 Epub Date: 2024-09-30 DOI: 10.1080/17410541.2024.2394397
Nader Al-Dewik, Tala Abuarja, Salma Younes, Gheyath Nasrallah, Mohamed Alsharshani, Faisal E Ibrahim, Muthanna Samara, Thomas Farrell, Palli Valapila Abdulrouf, M Walid Qoronfleh, Hilal Al Rifai

Precision Medicine (PM) is a transformative clinical medicine strategy that aims to revolutionize healthcare by leveraging biological information and biomarkers. In the context of maternal and neonatal health, PM enables personalized care from preconception through the postnatal period. Qatar has emerged as a key player in PM research, with dedicated programs driving advancements and translating cutting-edge research into clinical applications. This article delves into neonatal and maternal health in Qatar, emphasizing PM programs and initiatives that have been implemented. It also features noteworthy clinical cases that demonstrate the effectiveness of precision interventions. Furthermore, the article highlights the role of pharmacogenomics in addressing various maternal health conditions. The review further explores potential advancements in the application of PM in maternal and neonatal healthcare in Qatar.

精准医学(Precision Medicine,PM)是一项变革性的临床医学战略,旨在利用生物信息和生物标记物彻底改变医疗保健。在孕产妇和新生儿健康方面,精准医疗实现了从孕前到产后的个性化护理。卡塔尔已成为 PM 研究领域的重要参与者,其专门项目推动了研究的进展,并将前沿研究成果转化为临床应用。本文深入探讨了卡塔尔的新生儿和孕产妇健康,重点介绍了已实施的预防医学计划和措施。文章还介绍了一些值得关注的临床案例,这些案例证明了精准干预的有效性。此外,文章还强调了药物基因组学在解决各种孕产妇健康问题方面的作用。综述进一步探讨了在卡塔尔孕产妇和新生儿医疗保健中应用 PM 的潜在进展。
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引用次数: 0
miR-559 rs58450758 polymorphism is associated with colorectal cancer risk and prognosis in Chinese Han population. miR-559 rs58450758 多态性与中国汉族人群的结直肠癌风险和预后有关。
Pub Date : 2024-01-01 Epub Date: 2024-10-22 DOI: 10.1080/17410541.2024.2412512
Hanxing Huang, Lihan Xiao, Min Xiao, Kaiying Chen, Wentian Zheng, Ning Wu

Aim: This research examined the correlation between miR-559 rs58450758 and the clinical pathological characteristics and prognosis of CRC.Materials & methods: RT-qPCR was utilized to assess the miR-559 expression levels. Chi-square test was used to investigate the relationship between miR-559 and clinical features. The association between rs58450758 different genotypes and CRC risk, as well as clinical pathological parameters, was explored, utilizing logistic regression analysis and chi-square tests. The Cox regression model and Kaplan-Meier analysis evaluated overall survival in individuals with CRC.Results: The miR-559 was down-regulated in CRC patients' serum. The expressions of miR-559 were significantly associated with tumor size, differentiation, TNM stage and lymph node metastasis. The rs58450758 TT genotype and T allele carriers were more prevalent among CRC patients. The rs58450758 polymorphism was notably linked to tumor size, differentiation, TNM stage and lymph node metastasis in CRC patients. Furthermore, CC genotype carriers exhibited a longer survival period than CT/TT genotypes within the CRC population.Conclusion: The miR-559 rs58450758 polymorphism exhibits promise as a potential biomarker for prognosticating the outcomes of CRC.

目的:本研究探讨了miR-559 rs58450758与CRC临床病理特征和预后的相关性:采用 RT-qPCR 评估 miR-559 的表达水平。采用卡方检验研究 miR-559 与临床特征的关系。利用逻辑回归分析和卡方检验探讨了 rs58450758 不同基因型与 CRC 风险以及临床病理参数之间的关系。Cox回归模型和Kaplan-Meier分析评估了CRC患者的总生存率:结果:miR-559在CRC患者血清中下调。miR-559的表达与肿瘤大小、分化、TNM分期和淋巴结转移显著相关。在 CRC 患者中,rs58450758 TT 基因型和 T 等位基因携带者较多。rs58450758多态性与CRC患者的肿瘤大小、分化程度、TNM分期和淋巴结转移有明显联系。此外,与 CT/TT 基因型相比,CC 基因型携带者在 CRC 群体中的生存期更长:结论:miR-559 rs58450758 多态性有望成为预测 CRC 预后的潜在生物标记物。
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引用次数: 0
Diagnostic utility of the 23-gene expression profile test for an atypical intradermal melanocytic proliferation. 23基因表达谱测试对非典型皮内黑色素细胞增殖的诊断效用。
Pub Date : 2024-01-01 Epub Date: 2023-12-07 DOI: 10.2217/pme-2023-0110
Etan Marks, Anais A Badia, Matthew S Goldberg

Ancillary tests such as immunohistochemistry (IHC) and gene expression profile (GEP) testing may be needed to arrive at a definitive diagnosis for some atypical melanocytic neoplasms. A 34-year-old male with a family history of melanoma presented with a large, heterogeneous melanocytic lesion on the cheek. Histopathological review of two biopsies revealed an atypical intradermal melanocytic proliferation with spitzoid features without ulceration or regression. Scattered mitotic figures were identified. In addition to performing SOX10 IHC, PRAME and HMB45 staining highlighted weak, patchy positivity that was stronger in superficial, pleomorphic melanocytes (Ki-67, 5-7% mitotic rate). Based on these concerning but ambiguous IHC results and lingering concern for melanoma reiterated by other consulting dermatopathologists, the 23-GEP was requested for both specimens, which both returned a malignant result. The inconclusive histopathological features of malignancy were resolved by 23-GEP testing, facilitating a final diagnosis of malignant melanoma (pT3a, 2.5 mm Breslow depth, Clark's level IV).

辅助测试,如免疫组织化学(IHC)和基因表达谱(GEP)测试可能需要对一些非典型黑色素细胞肿瘤作出明确的诊断。一位34岁男性,有黑色素瘤家族史,在脸颊上出现了一个巨大的异质黑色素细胞病变。组织病理学检查的两个活组织检查显示一个不典型的皮内黑色素细胞增生,具有spitzoid特征,没有溃疡或消退。可见散在的有丝分裂象。除了SOX10 IHC外,PRAME和HMB45染色显示,在浅表多形性黑色素细胞(Ki-67,有丝分裂率5-7%)中,弱斑片状阳性更强。基于这些令人担忧但模棱两可的IHC结果,以及其他咨询皮肤病理学家重申的对黑色素瘤的挥之不去的担忧,我们要求对两个标本进行23-GEP检查,结果都是恶性的。通过23-GEP检测解决了恶性肿瘤的不确定性组织病理学特征,有助于最终诊断恶性黑色素瘤(pT3a, 2.5 mm Breslow深度,Clark's IV级)。
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引用次数: 0
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Personalized medicine
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