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Bridging the United States population diversity gaps in clinical research: roadmap to precision health and reducing health disparities. 弥合美国临床研究中的人口多样性差距:精确健康路线图和减少健康差距。
Pub Date : 2025-06-01 Epub Date: 2025-05-13 DOI: 10.1080/17410541.2025.2504329
Youssef Roman

Precision medicine promises improved health outcomes by tailoring treatments to individual genetic and environmental factors. However, achieving this potential is hindered by persistent health disparities and the underrepresentation of racially and ethnically diverse populations in clinical trials. Limited diversity in research exacerbates health inequities, reducing the generalizability of findings and widening gaps in access to effective treatments. This review outlines a multi-faceted strategy to bridge diversity gaps in clinical trials, focusing on community engagement, clinical pharmacology, and regulatory science. Key approaches include decentralized trials, targeted recruitment, advanced data modeling, and comprehensive integration of genetic and social determinants of health data. Regulatory frameworks, such as diversity action plans, play a crucial role in ensuring equitable access to precision health innovations. Increasing representation in research enhances the reliability of clinical data and fosters health equity by addressing differences in disease prevalence, treatment responses, and healthcare access. By leveraging technological advancements and inclusive research methodologies, this framework aims to transform clinical trials into a roadmap for equitable healthcare. Ensuring diverse participation in research is essential for the successful implementation of precision medicine and realizing the full potential of precision health, ultimately reducing health disparities and promoting fair access to medical advancements across all populations.

精准医疗通过根据个体基因和环境因素定制治疗方案,有望改善健康状况。然而,实现这一潜力受到持续存在的健康差距和临床试验中不同种族和民族人口代表性不足的阻碍。研究的有限多样性加剧了卫生不平等,降低了研究结果的普遍性,并扩大了获得有效治疗方面的差距。本综述概述了一个多方面的战略,以弥合临床试验的多样性差距,重点是社区参与、临床药理学和监管科学。关键方法包括分散试验、有针对性的招募、先进的数据建模以及健康数据的遗传和社会决定因素的全面整合。多样性行动计划等监管框架在确保公平获得精准卫生创新方面发挥着至关重要的作用。增加在研究中的代表性可以提高临床数据的可靠性,并通过解决疾病流行、治疗反应和医疗保健获取方面的差异,促进卫生公平。通过利用技术进步和包容性研究方法,该框架旨在将临床试验转变为公平医疗保健的路线图。确保研究的多样化参与对于成功实施精准医疗和实现精准健康的全部潜力至关重要,从而最终缩小健康差距并促进所有人群公平获得医疗进步。
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引用次数: 0
Pharmacogenomic analysis and clinical annotation of 635 patients. 635例患者的药物基因组学分析及临床注释。
Pub Date : 2025-06-01 Epub Date: 2025-04-17 DOI: 10.1080/17410541.2025.2493606
Özkan Bağcı, Batuhan Şanlıtürk, Ebru Marzioğlu Özdemir, Nadir Koçak, Tülin Cora

Aim: In this study, we aimed to reveal the sequence analysis of 69 pharmacogenes in 635 patients and the clinical explanation of variants.

Materials and methods: Genomic DNA was isolated from peripheral blood of patients. Next-Generation Sequence analysis and bioinformatic analysis were performed to identify 69 pharmacogene variants. Variants with clinical annotation were identified.

Results: Analysis of 69 pharmacogenes in a total of 635 patients identified 9485 variants. The number of distinct variants identified in each gene was 1409. Of these 1409 variants, the number of variants registered in PharmGKB was 126. Among the 126 variants registered in PharmGKB, 26 variants were identified that had a direct association with clinical annotation and drug efficacy or toxicity. The most common variant genes were DPYD, CYP2C19, VKORC1,UGT1A1, RYR1 and MTHFR. These 26 variants with clinical annotation were identified in 327 (51%) different individuals.

Conclusions: Such a high frequency of critical variants (51%) points to the need for pharmacogenetic studies. The results are extremely important in terms of determining the drug dose according to the genomic status of individuals receiving drug therapy and preventing unnecessary health expenditures.

目的:本研究旨在揭示635例患者69个药原基因的序列分析及变异的临床解释。材料和方法:从患者外周血中分离基因组DNA。下一代序列分析和生物信息学分析鉴定了69个药物基因变异。鉴定出具有临床注释的变异。结果:对635例患者69个药原基因进行分析,鉴定出9485个变异。每个基因中鉴定出的不同变异数为1409个。在这1409个变体中,在PharmGKB中注册的变体数量为126个。在PharmGKB中登记的126个变异中,鉴定出26个变异与临床注释和药物疗效或毒性直接相关。最常见的变异基因为DPYD、CYP2C19、VKORC1、UGT1A1、RYR1和MTHFR。这26个具有临床注释的变异在327个(51%)不同的个体中被鉴定出来。结论:如此高的关键变异频率(51%)表明需要进行药物遗传学研究。在根据接受药物治疗的个体的基因组状况确定药物剂量和防止不必要的卫生支出方面,这些结果极为重要。
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引用次数: 0
Precision acute medical care through "-omic" analyses: a scoping review. 通过“基因组学”分析的精准急性医疗护理:范围综述。
Pub Date : 2025-06-01 Epub Date: 2025-05-12 DOI: 10.1080/17410541.2025.2499438
Cole Ettingoff, Megan Von Isenburg, Drew Birrenkott, Hirotaka Ata, Chris Kabrhel, Basmah Safdar, Kohei Hasegawa, Andrew Monte, Frederick Fred Korley, Cosby Gabrielle Arnold, Laura Heitsch, Matthew Strehlow, Alexander T Limkakeng

Background: -Omics technologies - including genomics, transcriptomics, proteomics, and metabolomics - are increasingly used in acute care settings. However, the current extent of this research has not been systematically assessed.

Objectives: To characterize how -omics analyses are applied to acute medical conditions and identify trends, gaps, and implementation barriers.

Methods: Eligible studies included human subjects with acute conditions and used -omics biosample analyses for diagnostic, prognostic, or predictive purposes. Feedback from the SAEM Precision Emergency Medicine Consensus Conference informed the search and inclusion criteria. Studies of infectious diseases were excluded for separate analysis.

Results: Of 7,531 screened articles, 421 met inclusion criteria. Most were observational cohort studies, with single nucleotide polymorphism analysis being most common. Cardiovascular and trauma-related conditions were frequently studied. Only 12.4% of studies included children, and just 7 focused exclusively on older adults. One-third were conducted outside of emergency departments. Many studies addressed diverse, uncategorized acute conditions.

Conclusions: While -omics research in acute care is growing, it remains predominantly observational with limited clinical implementation. Barriers include delayed turnaround times, insufficient EHR integration, and underrepresentation of vulnerable populations. Advancing this field requires cross-disciplinary collaboration, focused research priorities, and investment in implementation studies.

背景:组学技术——包括基因组学、转录组学、蛋白质组学和代谢组学——越来越多地用于急性护理环境。然而,目前这项研究的程度还没有得到系统的评估。目的:描述组学分析如何应用于急性医疗状况,并确定趋势、差距和实施障碍。方法:符合条件的研究包括急性疾病的人类受试者和用于诊断、预后或预测目的的组学生物样本分析。来自SAEM精确急诊医学共识会议的反馈通知了搜索和纳入标准。传染病的研究被排除在单独分析之外。结果:在7531篇筛选的文章中,421篇符合纳入标准。大多数是观察性队列研究,单核苷酸多态性分析是最常见的。心血管和创伤相关疾病经常被研究。只有12.4%的研究包括儿童,只有7项研究专门针对老年人。三分之一是在急诊室外进行的。许多研究针对不同的、未分类的急性疾病。结论:虽然组学在急症护理中的研究正在增长,但它仍然主要是观察性的,临床应用有限。障碍包括周转时间延迟、电子病历整合不足以及弱势群体代表性不足。推进这一领域需要跨学科合作、重点研究和对实施研究的投资。
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引用次数: 0
Developing the Workplace Learning Social System: considerations for genomics implementation and workforce preparedness. 开发工作场所学习社会系统:基因组学实施和劳动力准备的考虑因素。
Pub Date : 2025-04-01 Epub Date: 2025-03-12 DOI: 10.1080/17410541.2025.2475731
Alice Kim, Amy Nisselle, Louise Keogh, Jennifer Weller-Newton

Innovations, such as genomics, are expected to transform the practice of the healthcare workforce. Workplace learning is an established and fundamental component of healthcare workforce training. We propose that it can be leveraged to facilitate workforce preparedness to adopt innovations relevant to practice. To explore this, this study aimed to develop a workplace learning framework premised on primary literature. Four databases were systematically searched to identify and synthesize contemporary research articles investigating doctors' workplace learning, with an additional focus on genetics/genomics. From the articles included, factors influencing workplace learning were extracted. Informed by structuration and workplace learning theories, thematic analysis was conducted on these factors to generate the framework. Despite the lack of articles on doctors' genetics/genomics workplace learning, 50 articles on doctors' workplace learning were included. Extracted influencing factors were synthesized into five major domains, across three social system levels and the agentic learner, to generate the Workplace Learning Social System framework. Innovations in healthcare require its workforce to change work practices. The Workplace Learning Social System framework holistically conceptualizes workplace learning based on contemporary literature. It provides pragmatic insights to inform workforce development when implementing innovations as part of system-wide change.

基因组学等创新有望改变医疗保健工作人员的做法。工作场所学习是医疗保健人力培训的一个既定和基本组成部分。我们建议,可以利用它来促进劳动力准备,采用与实践相关的创新。为了探讨这一点,本研究旨在以原始文献为前提,开发一个工作场所学习框架。系统地检索了四个数据库,以识别和合成调查医生工作场所学习的当代研究文章,并额外关注遗传学/基因组学。从纳入的文章中提取影响职场学习的因素。根据结构和工作场所学习理论,对这些因素进行了专题分析,以生成框架。尽管缺乏关于医生遗传学/基因组学工作场所学习的文章,但有50篇关于医生工作场所学习的文章被纳入。将提取的影响因素综合到五个主要领域,跨越三个社会系统层次和代理学习者,生成工作场所学习社会系统框架。医疗保健领域的创新要求其员工改变工作实践。职场学习社会系统框架以当代文献为基础,对职场学习进行了整体概念化。它提供了实用的见解,为劳动力发展提供信息,当实施创新作为全系统变革的一部分时。
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引用次数: 0
Association of miR-21 gene polymorphisms with cognitive function in patients with systemic lupus erythematosus. 系统性红斑狼疮患者miR-21基因多态性与认知功能的关联
Pub Date : 2025-04-01 Epub Date: 2025-03-14 DOI: 10.1080/17410541.2025.2478809
Tiantian Wei, Jing Shen, Lijun He, Wei Zhou, Hui Zhang

Objectives: The genetic variant rs13137 of miR-21 is associated with susceptibility in many diseases. However, the association with cognitive dysfunction (CD) in Chinese patients with systemic lupus erythematosus (SLE) remains unclear.

Materials and methods: Two hundred and thirty SLE patients (Non-CD) and 230 SLE-related CD patients (CD) were recruited. MiR-21 level was calculated by qRT-PCR. The ROC curve was established to evaluate the diagnosibility. The independent risk factors were identified by multivariate logistic regression analysis.

Results: The miR-21 in CD group was obviously increased. Compared to AA carriers, the miR-21 level in carriers of rs13137 AT/TT in CD group were significantly lower than those in Non-CD group. The AUC was 0.9023 with sensitivity of 78.70% and specificity of 90.87%. Comparison of genotype and allele frequencies indicated that SLE patients carrying rs13137 AT/TT genotype had low risk of CD. Multivariate logistic regression analysis showed that the rs13137 polymorphism, education years, and MoCA score were correlated with CD risk.

Conclusion: The miR-21 rs13137 polymorphism was correlated with CD risk in the Chinese population. MiR-21 in rs13137 AT/TT carriers was significantly lower than that of AA genotype and the AT/TT genotype was correlated with low CD risk in SLE patients.

目的:miR-21的遗传变异rs13137与许多疾病的易感性相关。然而,中国系统性红斑狼疮(SLE)患者与认知功能障碍(CD)的关系尚不清楚。材料与方法:招募230例SLE患者(非CD)和230例SLE相关CD患者(CD)。采用qRT-PCR计算MiR-21水平。建立ROC曲线评价诊断性。多因素logistic回归分析确定独立危险因素。结果:CD组miR-21水平明显升高。与AA携带者相比,CD组rs13137 AT/TT携带者miR-21水平显著低于非CD组。AUC为0.9023,敏感性78.70%,特异性90.87%。基因型和等位基因频率的比较表明,携带rs13137 AT/TT基因型的SLE患者发生CD的风险较低。多因素logistic回归分析显示,rs13137多态性、受教育年限、MoCA评分与CD风险相关。结论:miR-21 rs13137多态性与中国人群的CD风险相关。MiR-21在rs13137 AT/TT携带者中显著低于AA基因型,AT/TT基因型与SLE患者低CD风险相关。
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引用次数: 0
How people undergoing genomic sequencing interpret and react to varied secondary findings with limited actionability. 正在进行基因组测序的人们如何解释和应对可操作性有限的各种次要发现。
Pub Date : 2025-04-01 Epub Date: 2025-03-18 DOI: 10.1080/17410541.2025.2476392
Haoyang Yan, Christine M Rini, Ann Katherine M Foreman, Jonathan S Berg, Gail E Henderson, Kristy Lee, Julianne M O'Daniel, Myra Roche, Margaret Waltz

Purpose: To investigate patient reactions to and understanding of secondary genomic findings with limited to no medical actionability (LMA-SFs) from diagnostic genome sequencing.

Methods: We analyzed LMA-SFs returned to 47 adults who elected to receive a broad set of these results from 6 categories. Findings indicated elevated risk (reportable/positive) or not (negative/normal). Most participants (N = 43) also completed surveys to report their distress, decision regret, expected health anxiety, and whether and how they perceived results as reassuring or troubling.

Results: Most participants received some reportable LMA-SFs for common risk, pharmacogenetic, and carrier status variants. Fewer received reportable APOE haplotype or monogenetic condition variants. None received results indicating high risk for severe neurological disease. Overall, participants (76.7% female, 97.7% White) had low distress, decision regret, and expected health anxiety. None described negative/normal findings as troubling. However, their interpretations of reportable/positive results varied. Even within the same result type, some participants found them troubling, while others found them reassuring based on their perception of the results' utility.

Conclusion: Participants' short-term well-being was not reduced by receiving LMA-SFs. Their interpretations suggested varied personal utilities and the need for post-test resources to aid understanding of these types of results and their health significance.

目的:调查患者对诊断性基因组测序有限或无医疗可操作性(lma - sf)的二次基因组发现的反应和理解。方法:我们分析了47名成年人的lma - sf,他们选择从6个类别中获得广泛的结果。结果显示风险升高(可报告/阳性)或不升高(阴性/正常)。大多数参与者(N = 43)还完成了调查,报告了他们的痛苦,决定后悔,预期的健康焦虑,以及他们是否以及如何将结果视为令人安心或令人不安。结果:大多数参与者接受了一些可报告的lma - sf,用于共同风险、药理学和携带者状态变异。较少接受报告的APOE单倍型或单基因条件变异。没有人得到严重神经系统疾病高风险的结果。总体而言,参与者(76.7%的女性,97.7%的白人)有较低的痛苦、决定后悔和预期的健康焦虑。没有人认为阴性/正常的结果令人不安。然而,他们对可报告/阳性结果的解释各不相同。即使在相同的结果类型中,一些参与者发现它们令人不安,而另一些人则根据他们对结果效用的看法感到放心。结论:接受LMA-SFs并没有降低参与者的短期幸福感。他们的解释表明了不同的个人用途和测试后资源的需求,以帮助理解这些类型的结果及其对健康的意义。
{"title":"How people undergoing genomic sequencing interpret and react to varied secondary findings with limited actionability.","authors":"Haoyang Yan, Christine M Rini, Ann Katherine M Foreman, Jonathan S Berg, Gail E Henderson, Kristy Lee, Julianne M O'Daniel, Myra Roche, Margaret Waltz","doi":"10.1080/17410541.2025.2476392","DOIUrl":"10.1080/17410541.2025.2476392","url":null,"abstract":"<p><strong>Purpose: </strong>To investigate patient reactions to and understanding of secondary genomic findings with limited to no medical actionability (LMA-SFs) from diagnostic genome sequencing.</p><p><strong>Methods: </strong>We analyzed LMA-SFs returned to 47 adults who elected to receive a broad set of these results from 6 categories. Findings indicated elevated risk (reportable/positive) or not (negative/normal). Most participants (<i>N</i> = 43) also completed surveys to report their distress, decision regret, expected health anxiety, and whether and how they perceived results as reassuring or troubling.</p><p><strong>Results: </strong>Most participants received some reportable LMA-SFs for common risk, pharmacogenetic, and carrier status variants. Fewer received reportable <i>APOE</i> haplotype or monogenetic condition variants. None received results indicating high risk for severe neurological disease. Overall, participants (76.7% female, 97.7% White) had low distress, decision regret, and expected health anxiety. None described negative/normal findings as troubling. However, their interpretations of reportable/positive results varied. Even within the same result type, some participants found them troubling, while others found them reassuring based on their perception of the results' utility.</p><p><strong>Conclusion: </strong>Participants' short-term well-being was not reduced by receiving LMA-SFs. Their interpretations suggested varied personal utilities and the need for post-test resources to aid understanding of these types of results and their health significance.</p>","PeriodicalId":94167,"journal":{"name":"Personalized medicine","volume":" ","pages":"93-101"},"PeriodicalIF":0.0,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12206488/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143660190","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Association of XRCC gene family and CDH1 gene polymorphisms with gastric cancer risk in a Chinese population. XRCC基因家族和CDH1基因多态性与中国人群胃癌风险的关系
Pub Date : 2025-04-01 Epub Date: 2025-03-09 DOI: 10.1080/17410541.2025.2473306
Yalan Sun, Ying Wang, Mengqiu Xiong, Ping Tai, Lubanga Nasifu, William Chi Shing Cho, Chengbin Zhu, Panfei Hou, Bangshun He

Background: Gastric carcinogenesis is associated with defects in DNA damage repair pathways, in which the XRCC gene family (XRCC1, XRCC5, and XRCC6) play an important role in DNA repair. It is also well known that the CDH1 gene, as a tumor suppressor, influences the development of gastric cancer.

Methods: We recruited 484 gastric cancer patients and 471 controls. DNA genotyping and Helicobacter pylori infection were determined by commercial kits. Association between polymorphisms and gastric cancer risk and survival was evaluated through SPSS 26.0.

Results: Stratified analysis revealed that XRCC1 rs25487 TC/TT was associated with increased gastric cancer risk in the following four subgroups of males (adjusted OR = 1.40, 95% CI: 1.03-1.90, p = 0.031), positive Helicobacter pylori (adjusted OR = 1.58, 95% CI: 1.09-2.28, p = 0.015), tumor stage III-IV (adjusted OR = 1.42, 95% CI: 1.06-1.89, p = 0.017), and non-gastric cardiac adenocarcinoma (adjusted OR = 1.36, 95% CI: 1.02-1.82, p = 0.034). Additionally, survival analysis indicated that XRCC1 rs25487 TC/TT genotype (HR = 1.35, 95% CI: 1.08-1.69, p = 0.010) was associated with unfavorable survival in gastric cancer patients.

Conclusion: XRCC1 rs25487 CC genotype decreased the risk of gastric cancer, and predicted a favorable survival prognosis.

背景:胃癌发生与DNA损伤修复通路缺陷相关,其中XRCC基因家族(XRCC1、XRCC5、XRCC6)在DNA修复中发挥重要作用。众所周知,CDH1基因作为肿瘤抑制因子,影响胃癌的发生发展。方法:选取胃癌患者484例,对照组471例。DNA基因分型及幽门螺杆菌感染检测试剂盒。通过SPSS 26.0软件评估多态性与胃癌风险和生存的关系。结果:分层分析显示,XRCC1 rs25487 TC/TT与以下4个男性亚组(校正OR = 1.40, 95% CI: 1.03-1.90, p = 0.031)、幽门螺杆菌阳性(校正OR = 1.58, 95% CI: 1.09-2.28, p = 0.015)、肿瘤III-IV期(校正OR = 1.42, 95% CI: 1.06-1.89, p = 0.017)和非胃心腺癌(校正OR = 1.36, 95% CI: 1.02-1.82, p = 0.034)的胃癌风险增加相关。此外,生存分析显示,XRCC1 rs25487 TC/TT基因型(HR = 1.35, 95% CI: 1.08-1.69, p = 0.010)与胃癌患者的不良生存相关。结论:XRCC1 rs25487 CC基因型可降低胃癌发生风险,并预示良好的生存预后。
{"title":"Association of <i>XRCC</i> gene family and <i>CDH1</i> gene polymorphisms with gastric cancer risk in a Chinese population.","authors":"Yalan Sun, Ying Wang, Mengqiu Xiong, Ping Tai, Lubanga Nasifu, William Chi Shing Cho, Chengbin Zhu, Panfei Hou, Bangshun He","doi":"10.1080/17410541.2025.2473306","DOIUrl":"10.1080/17410541.2025.2473306","url":null,"abstract":"<p><strong>Background: </strong>Gastric carcinogenesis is associated with defects in DNA damage repair pathways, in which the <i>XRCC</i> gene family (<i>XRCC1</i>, <i>XRCC5</i>, and <i>XRCC6</i>) play an important role in DNA repair. It is also well known that the <i>CDH1</i> gene, as a tumor suppressor, influences the development of gastric cancer.</p><p><strong>Methods: </strong>We recruited 484 gastric cancer patients and 471 controls. DNA genotyping and <i>Helicobacter pylori</i> infection were determined by commercial kits. Association between polymorphisms and gastric cancer risk and survival was evaluated through SPSS 26.0.</p><p><strong>Results: </strong>Stratified analysis revealed that <i>XRCC1</i> rs25487 TC/TT was associated with increased gastric cancer risk in the following four subgroups of males (adjusted OR = 1.40, 95% CI: 1.03-1.90, <i>p</i> = 0.031), positive <i>Helicobacter pylori</i> (adjusted OR = 1.58, 95% CI: 1.09-2.28, <i>p</i> = 0.015), tumor stage III-IV (adjusted OR = 1.42, 95% CI: 1.06-1.89, <i>p</i> = 0.017), and non-gastric cardiac adenocarcinoma (adjusted OR = 1.36, 95% CI: 1.02-1.82, <i>p</i> = 0.034). Additionally, survival analysis indicated that <i>XRCC1</i> rs25487 TC/TT genotype (HR = 1.35, 95% CI: 1.08-1.69, <i>p</i> = 0.010) was associated with unfavorable survival in gastric cancer patients.</p><p><strong>Conclusion: </strong><i>XRCC1</i> rs25487 CC genotype decreased the risk of gastric cancer, and predicted a favorable survival prognosis.</p>","PeriodicalId":94167,"journal":{"name":"Personalized medicine","volume":" ","pages":"103-111"},"PeriodicalIF":0.0,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143589024","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The correlation between the polymorphism of lysolecithin acyltransferase (MBOAT7) rs641738 and liver fibrosis. 溶卵磷脂酰基转移酶(MBOAT7) rs641738多态性与肝纤维化的相关性。
Pub Date : 2025-04-01 Epub Date: 2025-03-07 DOI: 10.1080/17410541.2025.2476379
Yuxia Yang, Xiang Chen, Huiqin Zhang, Gang Yang, Xiaoyun Zhu, Xiujing Si, Feilong Chen, Yan Zhao, Feng Jin, Juanjuan Lu

Objective: We aimed to explore the relationship between the MBOAT7 rs641738 gene polymorphism and liver fibrosis and inflammation.

Methods: A total of 214 patients with metabolic dysfunction-associated steatotic liver disease (MASLD) were allocated into the mild-to-moderate and severe liver fibrosis groups based on liver fibrosis degree. The genotypes at the MBOAT7 rs641738 locus were evaluated. Differences in clinical and biochemical indicators, as well as the genotype and allele frequency distributions of the MBOAT7 rs641738 polymorphism, were analyzed across groups with varying degrees of liver fibrosis. Additionally, the clinical and biochemical differences among patients with different genotypes were examined.

Results: Significant differences were observed in the distribution of CC, CT, and TT genotypes, as well as C and T allele frequencies at the MBOAT7 rs641738 locus, between patients with mild-to-moderate and severe fibrosis. Carriers of the CT + TT genotype had a higher risk of developing severe liver fibrosis compared to those with the CC genotype (OR > 1). Furthermore, CT + TT carriers had higher levels of inflammatory cytokines and more severe fibrosis than CC genotype carriers (all p < 0.05).

Conclusion: The MBOAT7 rs641738 gene polymorphism is associated with the severity of liver fibrosis and inflammation.

目的:探讨MBOAT7 rs641738基因多态性与肝纤维化和炎症的关系。方法:将214例代谢功能障碍相关脂肪变性肝病(MASLD)患者根据肝纤维化程度分为轻至中度和重度肝纤维化组。对MBOAT7 rs641738位点的基因型进行了评估。分析不同程度肝纤维化组间临床生化指标、MBOAT7 rs641738多态性基因型及等位基因频率分布的差异。此外,还分析了不同基因型患者的临床和生化差异。结果:在轻中度和重度纤维化患者中,CC、CT和TT基因型分布以及MBOAT7 rs641738位点的C和T等位基因频率存在显著差异。CT + TT基因型携带者发生严重肝纤维化的风险高于CC基因型携带者(OR bbb1)。与CC基因型携带者相比,CT + TT携带者的炎症因子水平更高,纤维化程度更严重(均p)。结论:MBOAT7 rs641738基因多态性与肝纤维化和炎症的严重程度相关。
{"title":"The correlation between the polymorphism of lysolecithin acyltransferase (MBOAT7) rs641738 and liver fibrosis.","authors":"Yuxia Yang, Xiang Chen, Huiqin Zhang, Gang Yang, Xiaoyun Zhu, Xiujing Si, Feilong Chen, Yan Zhao, Feng Jin, Juanjuan Lu","doi":"10.1080/17410541.2025.2476379","DOIUrl":"10.1080/17410541.2025.2476379","url":null,"abstract":"<p><strong>Objective: </strong>We aimed to explore the relationship between the MBOAT7 rs641738 gene polymorphism and liver fibrosis and inflammation.</p><p><strong>Methods: </strong>A total of 214 patients with metabolic dysfunction-associated steatotic liver disease (MASLD) were allocated into the mild-to-moderate and severe liver fibrosis groups based on liver fibrosis degree. The genotypes at the MBOAT7 rs641738 locus were evaluated. Differences in clinical and biochemical indicators, as well as the genotype and allele frequency distributions of the MBOAT7 rs641738 polymorphism, were analyzed across groups with varying degrees of liver fibrosis. Additionally, the clinical and biochemical differences among patients with different genotypes were examined.</p><p><strong>Results: </strong>Significant differences were observed in the distribution of CC, CT, and TT genotypes, as well as C and T allele frequencies at the MBOAT7 rs641738 locus, between patients with mild-to-moderate and severe fibrosis. Carriers of the CT + TT genotype had a higher risk of developing severe liver fibrosis compared to those with the CC genotype (OR > 1). Furthermore, CT + TT carriers had higher levels of inflammatory cytokines and more severe fibrosis than CC genotype carriers (all <i>p</i> < 0.05).</p><p><strong>Conclusion: </strong>The MBOAT7 rs641738 gene polymorphism is associated with the severity of liver fibrosis and inflammation.</p>","PeriodicalId":94167,"journal":{"name":"Personalized medicine","volume":" ","pages":"113-119"},"PeriodicalIF":0.0,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143589026","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Head-to-head comparison of tyrosine kinase inhibitors in renal cell carcinoma using patient-derived cell culture. 酪氨酸激酶抑制剂在肾细胞癌患者来源的细胞培养中的头对头比较。
Pub Date : 2025-04-01 Epub Date: 2025-03-03 DOI: 10.1080/17410541.2025.2473303
Aaron J Urquhart, Christian H Glass, Tyrone L R Humphries, Andrew J Kassianos, David A Vesey, Simon T Wood, Glenda C Gobe, Robert J Ellis

Background: Metastatic renal cell carcinoma (RCC) is often treated with a combination of immunotherapy and tyrosine kinase inhibitors (TKIs). Patient-derived RCC cells were cultured and inter-individual differences to treatment with a panel of TKIs were evaluated.

Methods: Tumor tissue was collected during nephrectomy. Cells were cultured and treated with a panel of clinically relevant TKIs (sunitinib, cabozantinib, pazopanib, axitinib) at concentrations of 5 µM for 48-72 hours. Cell viability was evaluated using MTT assays. One-sided T-tests were used to evaluate results.

Results: Patient-derived cancer cells were able to be grown beyond 10 passages from 12/38 samples collected (27%). Four patient-derived samples were tested against the TKI panel. No substantial difference between drugs was seen for two samples. In one sample, there was a clear superior response to sunitinib (48% mean viability, vs >75% for the other drugs). For the final sample, sunitinib, cabozantinib, and axitinib demonstrated a superior response compared with pazopanib (71%, 77%, 70%, and 85% mean viability, respectively).

Conclusions: Inter-individual variability in the responses of patient-derived RCC cultures to TKIs was seen, which may have biological and clinical significance. Future directions could build on this work to develop personalized cancer susceptibility profiles, with potential for translation into a clinical trial.

背景:转移性肾细胞癌(RCC)通常采用免疫疗法和酪氨酸激酶抑制剂(TKIs)联合治疗。培养患者来源的RCC细胞,并评估一组TKIs治疗的个体间差异。方法:在肾切除术中收集肿瘤组织。细胞培养后用一组临床相关的TKIs(舒尼替尼、卡博赞替尼、帕唑帕尼、阿西替尼)以5µM浓度处理48-72小时。采用MTT法测定细胞活力。采用单侧t检验评价结果。结果:患者来源的癌细胞在收集的38个样本中有12个(27%)能够生长超过10代。四个患者来源的样本与TKI面板进行了测试。在两个样本中,药物之间没有明显的差异。在一个样本中,舒尼替尼的反应明显优于其他药物(平均生存率为48%,而其他药物为75%)。对于最终样本,舒尼替尼、卡博赞替尼和阿西替尼与帕唑帕尼相比表现出更好的反应(分别为71%、77%、70%和85%)。结论:患者来源的RCC培养物对TKIs的反应存在个体差异,这可能具有生物学和临床意义。未来的方向可以建立在这项工作的基础上,以开发个性化的癌症易感性档案,并有可能转化为临床试验。
{"title":"Head-to-head comparison of tyrosine kinase inhibitors in renal cell carcinoma using patient-derived cell culture.","authors":"Aaron J Urquhart, Christian H Glass, Tyrone L R Humphries, Andrew J Kassianos, David A Vesey, Simon T Wood, Glenda C Gobe, Robert J Ellis","doi":"10.1080/17410541.2025.2473303","DOIUrl":"10.1080/17410541.2025.2473303","url":null,"abstract":"<p><strong>Background: </strong>Metastatic renal cell carcinoma (RCC) is often treated with a combination of immunotherapy and tyrosine kinase inhibitors (TKIs). Patient-derived RCC cells were cultured and inter-individual differences to treatment with a panel of TKIs were evaluated.</p><p><strong>Methods: </strong>Tumor tissue was collected during nephrectomy. Cells were cultured and treated with a panel of clinically relevant TKIs (sunitinib, cabozantinib, pazopanib, axitinib) at concentrations of 5 µM for 48-72 hours. Cell viability was evaluated using MTT assays. One-sided T-tests were used to evaluate results.</p><p><strong>Results: </strong>Patient-derived cancer cells were able to be grown beyond 10 passages from 12/38 samples collected (27%). Four patient-derived samples were tested against the TKI panel. No substantial difference between drugs was seen for two samples. In one sample, there was a clear superior response to sunitinib (48% mean viability, vs >75% for the other drugs). For the final sample, sunitinib, cabozantinib, and axitinib demonstrated a superior response compared with pazopanib (71%, 77%, 70%, and 85% mean viability, respectively).</p><p><strong>Conclusions: </strong>Inter-individual variability in the responses of patient-derived RCC cultures to TKIs was seen, which may have biological and clinical significance. Future directions could build on this work to develop personalized cancer susceptibility profiles, with potential for translation into a clinical trial.</p>","PeriodicalId":94167,"journal":{"name":"Personalized medicine","volume":" ","pages":"83-91"},"PeriodicalIF":0.0,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143545522","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Individualized psychiatric care: integration of therapeutic drug monitoring, pharmacogenomics, and biomarkers. 精神科个体化护理:治疗药物监测、药物基因组学和生物标志物的整合。
Pub Date : 2025-02-01 Epub Date: 2024-12-20 DOI: 10.1080/17410541.2024.2442897
Sara Salatin, Ali Reza Shafiee-Kandjani, Samin Hamidi, Akbar Amirfiroozi, Parinaz Kalejahi

Personalized treatment optimization considers individual clinical, genetic, and environmental factors influencing drug efficacy and tolerability. As evidence accumulates, these approaches may become increasingly integrated into standard psychiatric care, potentially transforming the treatment landscape for mental health disorders. While personalized treatment optimization shows promise in enhancing therapeutic outcomes and minimizing adverse effects, further research is needed to establish its clinical utility and cost-effectiveness across various psychiatric disorders. This review examines the potential utility of personalized treatment optimization in psychiatry, addressing the challenge of suboptimal effectiveness and variable patient responses to psychiatric medications. It explores how therapeutic drug monitoring, pharmacogenomics, and biomarker testing can be used to individualize and optimize pharmacotherapy for mental disorders such as depression, bipolar disorder, and schizophrenia.

个性化治疗优化考虑了影响药物疗效和耐受性的个体临床、遗传和环境因素。随着证据的积累,这些方法可能会越来越多地纳入标准的精神病学治疗,潜在地改变精神健康障碍的治疗前景。虽然个性化治疗优化有望提高治疗效果并最大限度地减少不良反应,但需要进一步研究以确定其在各种精神疾病中的临床效用和成本效益。这篇综述探讨了精神病学个性化治疗优化的潜在效用,解决了次优疗效和患者对精神药物反应的挑战。它探讨了治疗药物监测、药物基因组学和生物标志物测试如何用于个性化和优化精神障碍(如抑郁症、双相情感障碍和精神分裂症)的药物治疗。
{"title":"Individualized psychiatric care: integration of therapeutic drug monitoring, pharmacogenomics, and biomarkers.","authors":"Sara Salatin, Ali Reza Shafiee-Kandjani, Samin Hamidi, Akbar Amirfiroozi, Parinaz Kalejahi","doi":"10.1080/17410541.2024.2442897","DOIUrl":"10.1080/17410541.2024.2442897","url":null,"abstract":"<p><p>Personalized treatment optimization considers individual clinical, genetic, and environmental factors influencing drug efficacy and tolerability. As evidence accumulates, these approaches may become increasingly integrated into standard psychiatric care, potentially transforming the treatment landscape for mental health disorders. While personalized treatment optimization shows promise in enhancing therapeutic outcomes and minimizing adverse effects, further research is needed to establish its clinical utility and cost-effectiveness across various psychiatric disorders. This review examines the potential utility of personalized treatment optimization in psychiatry, addressing the challenge of suboptimal effectiveness and variable patient responses to psychiatric medications. It explores how therapeutic drug monitoring, pharmacogenomics, and biomarker testing can be used to individualize and optimize pharmacotherapy for mental disorders such as depression, bipolar disorder, and schizophrenia.</p>","PeriodicalId":94167,"journal":{"name":"Personalized medicine","volume":" ","pages":"29-44"},"PeriodicalIF":0.0,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142873760","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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