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Evaluating the impact of infectious disease pharmacy services on voriconazole dose individualization in pediatric oncology. 评估感染性疾病药房服务对小儿肿瘤科伏立康唑剂量个体化的影响。
Pub Date : 2025-12-01 Epub Date: 2025-12-02 DOI: 10.1080/17410541.2025.2592525
Mai Samy Azab, Dalia Makhlouf, Omneya Ahmed, Omneya Hassanain, Lobna Shalaby, Mohamed Nagy

Background: The application of personalized medication management for Voriconazole(VCZ), such as therapeutic drug monitoring (TDM), is the gold standard for attaining therapeutic goals in invasive fungal infections. Infectious disease (ID) pharmacists are the best for ensuring the recommendations are properly implemented.

Aim: To assess the adherence of healthcare teams to VCZ dose individualization and the impact of the ID pharmacy team.

Method: This study included pediatric oncology patients who received VCZ in the inpatient department and had VCZ TDM level measurements for 3 months (from January to March 2019) and after implementing the (ID) pharmacy service during the same months in two different years (2020, 2021).

Results: This study included 989 patients who received VCZ; only 588/989 patients (59.5%) had VCZ TDM levels. Dose individualization was required for 62.6% (849/1357) levels, while 37.4% (508/1357) levels were in the therapeutic range. The overall compliance rate with the TDM recommendations was 92.9% (789/849). Additionally, there was a significant increase in VCZ dose individualization adherence after ID pharmacy implementation (88.6% (210/237) vs. 94.6% (579/612), p = 0.002). The rate of doctor acceptance of the ID pharmacist intervention was 94.7%.

Conclusion: ID pharmacists' contributions are crucial and can increase clinicians' adherence to individualized dose recommendations.

背景:伏立康唑(VCZ)个体化用药管理的应用,如治疗药物监测(TDM),是实现侵袭性真菌感染治疗目标的金标准。传染病(ID)药剂师是确保建议得到适当实施的最佳人选。目的:评估医疗团队对VCZ剂量个体化的依从性及ID药房团队的影响。方法:本研究包括在住房部接受VCZ治疗并在3个月内(2019年1月至3月)测量VCZ TDM水平的儿科肿瘤患者,以及在不同年份(2020年、2021年)的相同月份实施(ID)药房服务后的患者。结果:本研究纳入989例接受VCZ治疗的患者;989例患者中仅有588例(59.5%)达到VCZ TDM水平。62.6%(849/1357)水平需要剂量个体化,37.4%(508/1357)水平在治疗范围内。TDM建议的总体依从率为92.9%(789/849)。此外,实施ID药房后,VCZ剂量个体化依从性显著增加(88.6%(210/237)对94.6% (579/612),p = 0.002)。医师对ID药师干预的接受率为94.7%。结论:ID药师的贡献至关重要,可以提高临床医生对个体化剂量建议的依从性。
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引用次数: 0
Association between CYP11B2 rs1799998 genetic variant with essential hypertension and antihypertensive response. CYP11B2 rs1799998基因变异与原发性高血压和降压反应的关系
Pub Date : 2025-12-01 Epub Date: 2025-12-26 DOI: 10.1080/17410541.2025.2607956
Dalia Abdelrazaq, Yazun Jarrar, Hussein Alhawari, Malek Zihlif

Background: Essential hypertension (EH) is influenced by genetic and environmental factors. The CYP11B2 gene, encoding aldosterone synthase, plays a major role in blood pressure regulation. This study investigated the association of the CYP11B2 -344C/T (rs1799998) variant with EH in Jordanians and evaluated its influence on response to amlodipine and valsartan.

Methods: A case-control study was conducted involving 309 Jordanian participants (154 hypertensive patients and 155 normotensive controls). Genotyping was performed using PCR-RFLP. Blood pressure (BP) was recorded before and after 1 month of treatment with either 80 mg valsartan or 10 mg amlodipine.

Results: Genotype frequencies (TT: 32.0%, TC: 50.5%, CC: 17.5%) and T allele frequency (57.28%) did not differ significantly between hypertensive and control groups (p > 0.05). No association was found between rs1799998 and EH. Both valsartan and amlodipine significantly reduced BP (p < 0.001). While no CYP11B2 -344C/T genotype-dependent response was seen with valsartan, amlodipine was more effective in TT genotype carriers (SBP: 37 ± 2.0 mmHg, DBP: 20 ± 0.2 mmHg) compared to TC and CC (p = 0.028).

Conclusion: The CYP11B2 -344C/T variant was not associated with EH in Jordanians, but it was associated with amlodipine response. Further studies with larger sample size are needed to validate these findings.

背景:原发性高血压(EH)受遗传和环境因素的影响。编码醛固酮合成酶的CYP11B2基因在血压调节中起主要作用。本研究调查了CYP11B2 -344C/T (rs1799998)变异与约旦人EH的关系,并评估了其对氨氯地平和缬沙坦反应的影响。方法:对309名约旦参与者进行病例对照研究(154名高血压患者和155名正常对照组)。采用PCR-RFLP进行基因分型。分别用80 mg缬沙坦或10 mg氨氯地平治疗1个月前后记录血压(BP)。结果:高血压组与对照组的基因型频率(TT: 32.0%, TC: 50.5%, CC: 17.5%)和T等位基因频率(57.28%)差异无统计学意义(p < 0.05)。rs1799998与EH无关联。缬沙坦和氨氯地平均可显著降低血压(p p = 0.028)。结论:CYP11B2 -344C/T变异与约旦人EH无关,但与氨氯地平反应相关。需要更大样本量的进一步研究来验证这些发现。
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引用次数: 0
The association between DNA repair genes polymorphisms and cisplatin-induced ototoxicity in cancer patients: a systematic review. DNA修复基因多态性与癌症患者顺铂诱导耳毒性之间的关系:一项系统综述。
Pub Date : 2025-12-01 Epub Date: 2026-01-14 DOI: 10.1080/17410541.2025.2607150
Nabil E Omar, Rana Mekkawi, Salma Said, Omar Abd Elrahman, Fatima Hawasly, Anas Hamad, Hazem Elewa

Introduction: Ototoxicity is a dose-limiting toxicity of cisplatin. Several DNA repair gene polymorphisms have been investigated for their association with cisplatin-induced ototoxicity (CIO), but their predictive value remains controversial. This systematic review evaluated genetic predisposition to CIO via DNA repair gene polymorphisms.

Method: PubMed, SCOPUS, Web of Science, trial registries, and gray literature sources were searched, and reference lists of included studies were screened. Study quality was assessed using the Q-Genie tool, and reporting followed PRISMA guidelines. The protocol was registered on PROSPERO (ID: CRD420251112849).

Results: Eight studies with 672 subjects were deemed eligible, investigating nine DNA repair genes (XPA, XPC, ERCC1, ERCC2, XRCC1, EX01, ERCC4, and ERCC5), covering 96 single-nucleotide polymorphisms (SNPs), 54 of which were in DNA repair pathways. AC+CC genotypes of XPC rs2228001 were associated with decreased risk of CIO (OR: 0.20, 95% CI: 0.06-0.70, p = 0.01). Conversely, combining XPC rs2228001 with SNPs in GSTP1, FASL, or MSH3 showed the highest risks (ORs of 32.22, 22.29, and 17.09).

Conclusion: Although several DNA repair gene polymorphisms have been explored, findings remain inconsistent and limited by populations and SNPs studied. Larger, well-designed studies with standardized methodologies are needed to confirm these associations and identify genetic markers for predicting high-risk patients for CIO.

耳毒性是顺铂的剂量限制性毒性。一些DNA修复基因多态性已被研究与顺铂诱导的耳毒性(CIO)的关系,但其预测价值仍存在争议。本系统综述通过DNA修复基因多态性评估了CIO的遗传易感性。方法:检索PubMed、SCOPUS、Web of Science、试验注册库和灰色文献来源,筛选纳入研究的参考文献列表。使用Q-Genie工具评估研究质量,报告遵循PRISMA指南。协议在PROSPERO上注册(ID: CRD420251112849)。结果:8项研究纳入672名受试者,研究了9个DNA修复基因(XPA、XPC、ERCC1、ERCC2、XRCC1、EX01、ERCC4和ERCC5),涵盖96个单核苷酸多态性(snp),其中54个与DNA修复途径有关。XPC rs2228001的AC+CC基因型与CIO风险降低相关(OR: 0.20, 95% CI: 0.06-0.70, p = 0.01)。相反,将XPC rs2228001与GSTP1、FASL或MSH3中的snp联合使用的风险最高(or分别为32.22、22.29和17.09)。结论:虽然已经发现了几种DNA修复基因多态性,但研究结果仍然不一致,并且受到群体和snp研究的限制。需要更大规模、设计良好、采用标准化方法的研究来证实这些关联,并确定预测CIO高危患者的遗传标记。
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引用次数: 0
Val66Met polymorphism in the BDNF gene and antidepressant response in depression: an updated meta-analysis. BDNF基因Val66Met多态性与抑郁症的抗抑郁反应:一项最新的meta分析
Pub Date : 2025-12-01 Epub Date: 2025-08-07 DOI: 10.1080/17410541.2025.2544352
Raphael Enrique Tiongco, Roselle Arbas, Ana Caguiat, Eliezer John Castro, Kristin Chernelle Dela Cruz, Michael John Dominguez, Ma Agatha Anne Guintu, Julie Ann Mercado, Johana Vallo

Introduction: The Val66Met polymorphism in the brain-derived neurotrophic factor (BDNF) gene has been linked to antidepressant treatment response in patients with major depressive disorder (MDD), yet findings remain inconclusive. This updated meta-analysis aimed to clarify this association and explore subgroup effects based on antidepressant class and treatment duration.

Methods: A systematic search of PubMed, Web of Science, and Google Scholar was conducted through 27 December 2024. Studies were included if they assessed BDNF rs6265 genotypes and antidepressant response in MDD. Data were extracted and pooled odds ratios (ORs) with 95% confidence intervals (CIs) were calculated using Review Manager 5.4 under four genotypic models. Study quality was assessed using the Clark-Baudouin scale, and sensitivity and subgroup analyses were performed.

Results: Fourteen studies with 19 datasets were included in the meta-analysis. The overall outcomes indicated no association between the polymorphism and treatment response to antidepressants. Upon removal of outlier studies and studies that deviated from the Hardy-Weinberg equilibrium, significant and homogenous associations were noted with a strong relationship among East Asians treated with selective serotonin reuptake inhibitors (SSRIs).

Conclusion: The Met allele may predict favorable antidepressant response in SSRI-treated East Asian patients. Limitations include small sample sizes, moderate study quality, and limited ethnic diversity.

脑源性神经营养因子(BDNF)基因的Val66Met多态性与重度抑郁症(MDD)患者的抗抑郁治疗反应有关,但研究结果尚无定论。这项最新的荟萃分析旨在澄清这种关联,并探讨基于抗抑郁药类别和治疗持续时间的亚组效应。方法:系统检索PubMed、Web of Science和b谷歌Scholar,截止到2024年12月27日。如果研究评估了BDNF rs6265基因型和MDD患者的抗抑郁反应,则纳入研究。提取数据,使用Review Manager 5.4计算四种基因型模型下的合并优势比(ORs)和95%置信区间(ci)。采用Clark-Baudouin量表评估研究质量,并进行敏感性和亚组分析。结果:14项研究19个数据集被纳入meta分析。总体结果显示多态性与抗抑郁药物治疗反应之间没有关联。在剔除异常值研究和偏离Hardy-Weinberg平衡的研究后,发现东亚人接受选择性5 -羟色胺再摄取抑制剂(SSRIs)治疗之间存在显著的同质性关联。结论:Met等位基因可预测东亚患者接受ssri治疗后的良好抗抑郁反应。局限性包括样本量小,研究质量中等,种族多样性有限。
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引用次数: 0
How to treat BRAF mutant metastatic melanoma? 如何治疗BRAF突变性转移性黑色素瘤?
Pub Date : 2025-12-01 Epub Date: 2025-11-30 DOI: 10.1080/17410541.2025.2595903
Maria Cristina Sini, Milena Casula, Marina Pisano, Giuseppe Palmieri, Antonella Manca

Melanoma is a malignant tumour arising from melanocytes and is the most aggressive type of skin cancer. In advanced disease standard treatments are largely ineffective. About 40% of cutaneous melanomas carry BRAF mutations-more common in younger patients-and these are linked to more aggressive behaviour and a higher risk of brain metastasis. Over the past decade, targeted therapies (TT) using BRAF and MEK inhibitors (BRAFi, MEKi), along with immune checkpoint inhibitors (ICI), have significantly improved response rates and survival in metastatic melanoma.

黑色素瘤是一种由黑色素细胞产生的恶性肿瘤,是最具侵袭性的皮肤癌类型。在晚期疾病中,标准治疗基本上无效。大约40%的皮肤黑色素瘤携带BRAF突变——在年轻患者中更为常见——这些突变与更具攻击性的行为和更高的脑转移风险有关。在过去的十年中,使用BRAF和MEK抑制剂(BRAFi, MEKi)以及免疫检查点抑制剂(ICI)的靶向治疗(TT)显著提高了转移性黑色素瘤的反应率和生存率。
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引用次数: 0
Polygenic risk scores to refine Breast cancer screening and prevention strategies. 多基因风险评分改进乳腺癌筛查和预防策略。
Pub Date : 2025-12-01 Epub Date: 2025-11-13 DOI: 10.1080/17410541.2025.2581559
E Roberts, N Flaum, S J Howell, Dgr Evans

Breast cancer (BC) is the world's most prevalent cancer and can affect almost any post-pubertal woman. Early detection is associated with improved survival, and most high-income countries have adopted population-based screening programs to enhance early detection and survival although significant differences in screening age, methodology, and frequency exist. BC is known to be a heritable disease, with a small percentage of women having pathogenic variants in moderate or high-risk genes. However, Polygenic Risk Scores (PRS) incorporate many low penetrance single nucleotide polymorphisms (SNPs) and are the most powerful tool to help stratify women based on their personalized BC risk. PRS are particularly useful if incorporated into established risk prediction models (RPM). Risk stratification using PRS-containing RPMs can guide eligibility for enhanced screening and prevention programmes. This review discusses the role PRS plays in personalized risk prediction screening and prevention approaches as some of the challenges to their use.

乳腺癌(BC)是世界上最普遍的癌症,几乎可以影响任何青春期后的女性。早期发现与提高生存率有关,尽管在筛查年龄、方法和频率上存在显著差异,但大多数高收入国家都采用了基于人群的筛查计划,以提高早期发现和生存率。已知BC是一种遗传性疾病,一小部分妇女在中等或高危基因中具有致病性变异。然而,多基因风险评分(PRS)包含了许多低外显率的单核苷酸多态性(snp),是帮助女性根据其个性化的BC风险进行分层的最有力工具。如果将PRS纳入已建立的风险预测模型(RPM),它将特别有用。使用含有prs的rpm进行风险分层可以指导加强筛查和预防规划的资格。这篇综述讨论了PRS在个性化风险预测、筛查和预防方法中的作用,以及它们的使用所面临的一些挑战。
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引用次数: 0
A population pharmacokinetic model for early follow-up dosing of tacrolimus in Tunisian kidney transplant recipients. 突尼斯肾移植受者他克莫司早期随访剂量的人群药代动力学模型。
Pub Date : 2025-12-01 Epub Date: 2026-01-05 DOI: 10.1080/17410541.2025.2606641
Amani Abderahmene, Marith I Francke, Meriam Ammar, Louise M Andrews, Dennis A Hesselink, Dorra Amor, Wissal Sahtout, Azzabi Awatif, Ali Bouslama, Dorsaf Zellama, Asma Omezzine, Brenda C M De Winter

Introduction: Tacrolimus is the cornerstone of immunosuppressive therapy in kidney transplantation. However, it exhibits significant pharmacokinetic (PK) variability among patients. Therefore, Population Pharmacokinetic (PopPK) modeling is crucial for personalized tacrolimus treatment. While PopPK models have been extensively developed for transplant patients in Asian and Caucasian populations, it is true that limited data are available for Arab/North-African populations. Thus, our objective was to develop a PopPK model for the Tunisian population to optimize tacrolimus treatment after kidney transplantation.

Methods: Data on tacrolimus exposure and other patient factors were collected for the first 3 months after kidney transplantation. Genotyping for 6-SNPs was performed. The PK analysis was performed using nonlinear mixed-effects modeling.

Results: A total of 1901 whole-blood pre-dose tacrolimus concentrations (C0) of 196 Tunisian kidney transplant recipients were collected and described using a two-compartment model. CYP3A5*1 carriers had a 1.28-fold higher tacrolimus clearance (CL/F) compared to non-carriers. Higher body mass index (BMI) and lower hematocrit resulted in increased tacrolimus CL/F.

Conclusion: In the first 3 months post-transplant, tacrolimus CL/F was significantly influenced by CYP3A5 genotype, BMI, hematocrit, and time after transplantation. The model supports individualized dose adjustment; prospective external validation and a simple dose-adjustment algorithm are warranted to facilitate clinical implementation.

他克莫司是肾移植免疫抑制治疗的基石。然而,它在患者之间表现出显著的药代动力学(PK)变异性。因此,群体药代动力学(PopPK)模型对于个性化他克莫司治疗至关重要。虽然PopPK模型已广泛用于亚洲和高加索人群的移植患者,但用于阿拉伯/北非人群的数据确实有限。因此,我们的目标是为突尼斯人群开发一个PopPK模型,以优化肾移植后他克莫司的治疗。方法:收集肾移植术后前3个月他克莫司暴露及其他患者因素的数据。对6- snp进行基因分型。采用非线性混合效应模型进行PK分析。结果:共收集了196名突尼斯肾移植受者的1901个全血剂量前他克莫司浓度(C0),并使用双室模型进行了描述。CYP3A5*1携带者的他克莫司清除率(CL/F)比非携带者高1.28倍。较高的身体质量指数(BMI)和较低的红细胞压积导致他克莫司CL/F升高。结论:移植后前3个月,他克莫司CL/F受CYP3A5基因型、BMI、红细胞压积和移植后时间的显著影响。该模型支持个体化剂量调整;前瞻性的外部验证和简单的剂量调整算法是必要的,以促进临床实施。
{"title":"A population pharmacokinetic model for early follow-up dosing of tacrolimus in Tunisian kidney transplant recipients.","authors":"Amani Abderahmene, Marith I Francke, Meriam Ammar, Louise M Andrews, Dennis A Hesselink, Dorra Amor, Wissal Sahtout, Azzabi Awatif, Ali Bouslama, Dorsaf Zellama, Asma Omezzine, Brenda C M De Winter","doi":"10.1080/17410541.2025.2606641","DOIUrl":"10.1080/17410541.2025.2606641","url":null,"abstract":"<p><strong>Introduction: </strong>Tacrolimus is the cornerstone of immunosuppressive therapy in kidney transplantation. However, it exhibits significant pharmacokinetic (PK) variability among patients. Therefore, Population Pharmacokinetic (PopPK) modeling is crucial for personalized tacrolimus treatment. While PopPK models have been extensively developed for transplant patients in Asian and Caucasian populations, it is true that limited data are available for Arab/North-African populations. Thus, our objective was to develop a PopPK model for the Tunisian population to optimize tacrolimus treatment after kidney transplantation.</p><p><strong>Methods: </strong>Data on tacrolimus exposure and other patient factors were collected for the first 3 months after kidney transplantation. Genotyping for 6-SNPs was performed. The PK analysis was performed using nonlinear mixed-effects modeling.</p><p><strong>Results: </strong>A total of 1901 whole-blood pre-dose tacrolimus concentrations (C0) of 196 Tunisian kidney transplant recipients were collected and described using a two-compartment model. <i>CYP3A5*1</i> carriers had a 1.28-fold higher tacrolimus clearance (CL/F) compared to non-carriers. Higher body mass index (BMI) and lower hematocrit resulted in increased tacrolimus CL/F.</p><p><strong>Conclusion: </strong>In the first 3 months post-transplant, tacrolimus CL/F was significantly influenced by <i>CYP3A5</i> genotype, BMI, hematocrit, and time after transplantation. The model supports individualized dose adjustment; prospective external validation and a simple dose-adjustment algorithm are warranted to facilitate clinical implementation.</p>","PeriodicalId":94167,"journal":{"name":"Personalized medicine","volume":" ","pages":"455-465"},"PeriodicalIF":0.0,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145902110","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tailoring pediatric vancomycin doses: achieving therapeutic levels and minimizing toxicity in oncology patients. 调整儿科万古霉素剂量:达到治疗水平和最小化肿瘤患者的毒性。
Pub Date : 2025-12-01 Epub Date: 2025-10-08 DOI: 10.1080/17410541.2025.2565143
Nadeen Hossam, Dalia Makhlouf, Ahmed Elzeiny, Akram Elzeiny, Sherif Kamal, Omneya Hassanien, Lobna Shalaby, Mohamed Nagy

Background: Vancomycin is a widely used nephrotoxic drug in pediatric oncology. Our aim was to assess the initial vancomycin dosing protocols required for achieving the target therapeutic concentrations of vancomycin between 10 and 20 mcg/ml.

Methods: We analyzed 4134 vancomycin trough levels from 1678 pediatric oncology patients treated at CCHE 57357 (2017-2023).

Results: Higher initial Vancomycin doses (80 and 100 mg/kg/day) yielded better target levels (45.5%, 51.4%) compared to 60 mg/kg/day (38.1%). Younger patients (<10 years) showed higher sub-therapeutic levels than older ones (53.4% vs. 24.8%, p < 0.0001). Co-administration of nephrotoxic medications increased vancomycin toxicity risk (13.3% vs. 8.9%, p < 0.0001). Weight-based dosing of vancomycin resulted in higher therapeutic levels compared to capping doses at 500 mg.

Conclusion: Higher initial vancomycin doses (80-100 mg/kg/day) may be necessary to achieve therapeutic levels in pediatric oncology. Kg dosing beats capping for reaching targets without raising toxicity.

背景:万古霉素是儿科肿瘤中广泛使用的肾毒性药物。我们的目的是评估万古霉素的初始剂量方案,以达到万古霉素的目标治疗浓度在10至20微克/毫升之间。方法:我们分析了在CCHE 57357(2017-2023)治疗的1678例儿科肿瘤患者的4134例万古霉素谷水平。结果:较高的万古霉素初始剂量(80和100 mg/kg/天)比60 mg/kg/天(38.1%)产生更好的目标水平(45.5%,51.4%)。结论:儿童肿瘤可能需要更高的初始万古霉素剂量(80- 100mg /kg/天)才能达到治疗水平。Kg剂量超过上限达到目标而不增加毒性。
{"title":"Tailoring pediatric vancomycin doses: achieving therapeutic levels and minimizing toxicity in oncology patients.","authors":"Nadeen Hossam, Dalia Makhlouf, Ahmed Elzeiny, Akram Elzeiny, Sherif Kamal, Omneya Hassanien, Lobna Shalaby, Mohamed Nagy","doi":"10.1080/17410541.2025.2565143","DOIUrl":"10.1080/17410541.2025.2565143","url":null,"abstract":"<p><strong>Background: </strong>Vancomycin is a widely used nephrotoxic drug in pediatric oncology. Our aim was to assess the initial vancomycin dosing protocols required for achieving the target therapeutic concentrations of vancomycin between 10 and 20 mcg/ml.</p><p><strong>Methods: </strong>We analyzed 4134 vancomycin trough levels from 1678 pediatric oncology patients treated at CCHE 57357 (2017-2023).</p><p><strong>Results: </strong>Higher initial Vancomycin doses (80 and 100 mg/kg/day) yielded better target levels (45.5%, 51.4%) compared to 60 mg/kg/day (38.1%). Younger patients (<10 years) showed higher sub-therapeutic levels than older ones (53.4% vs. 24.8%, <i>p</i> < 0.0001). Co-administration of nephrotoxic medications increased vancomycin toxicity risk (13.3% vs. 8.9%, <i>p</i> < 0.0001). Weight-based dosing of vancomycin resulted in higher therapeutic levels compared to capping doses at 500 mg.</p><p><strong>Conclusion: </strong>Higher initial vancomycin doses (80-100 mg/kg/day) may be necessary to achieve therapeutic levels in pediatric oncology. Kg dosing beats capping for reaching targets without raising toxicity.</p>","PeriodicalId":94167,"journal":{"name":"Personalized medicine","volume":" ","pages":"369-377"},"PeriodicalIF":0.0,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145253856","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Leveraging oncology clinical case report data through the Cancer Knowledgebase (CKB). 利用肿瘤临床病例报告数据通过癌症知识库(CKB)。
Pub Date : 2025-12-01 Epub Date: 2025-11-03 DOI: 10.1080/17410541.2025.2581563
Rewatee H Gokhale, Cara M Statz, Taofei Yin, Ryan P Russell, Sarah Edie, Christine E Lehman, Sara E Patterson

Aims: Clinical case reports in oncology are an untapped resource of patient data that include relationships between molecular alterations, tumor types, and response to targeted therapy. A current challenge to widespread utilization of case reports in clinical practice is the lack of systematic organization of clinical evidence across disease types, patient outcomes, therapies, and associated molecular features. To address this challenge, we sought to demonstrate the utility of Cancer Knowledgebase (CKB) (https://ckb.genomenon.com/) in interpreting oncology case report data for health care providers.

Methods: We analyzed data from 5527 manually curated case reports in CKB to gain insights related to treatment options and patient response associated with specific molecular alterations.

Results: Each case report in CKB is represented as a unique efficacy evidence annotation and is associated with a specific molecular profile, therapy, indication, and response to therapy. Efficacy evidence from case reports spans over 500 genes, 2800 molecular profiles, and 300 tumor types, including several rare cancers and pediatric tumor types.

Conclusion: CKB is a powerful resource for leveraging case reports to identify treatment options for patients with rare cancers and oncogenic variants, patients for whom multiple therapies exist, and patients experiencing resistance to first-line therapy.

目的:肿瘤学的临床病例报告是一个未开发的患者数据资源,包括分子改变、肿瘤类型和对靶向治疗的反应之间的关系。目前在临床实践中广泛使用病例报告的一个挑战是缺乏对疾病类型、患者结局、治疗和相关分子特征的临床证据的系统组织。为了应对这一挑战,我们试图证明癌症知识库(CKB) (https://ckb.genomenon.com/)在为医疗保健提供者解释肿瘤病例报告数据方面的效用。方法:我们分析了5527例人工整理的CKB病例报告的数据,以获得与特定分子改变相关的治疗方案和患者反应的见解。结果:CKB的每个病例报告都被表示为一个独特的疗效证据注释,并与特定的分子谱、治疗、适应症和治疗反应相关。来自病例报告的疗效证据涵盖了500多个基因、2800个分子谱和300种肿瘤类型,包括几种罕见癌症和儿童肿瘤类型。结论:CKB是一个强大的资源,可以利用病例报告来确定罕见癌症和致癌变异患者的治疗方案,存在多种治疗方法的患者,以及对一线治疗产生耐药性的患者。
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引用次数: 0
The genetic association of IL-17A rs8193036 with the susceptibility to Alzheimer's disease. IL-17A rs8193036与阿尔茨海默病易感性的遗传关系
Pub Date : 2025-12-01 Epub Date: 2025-12-19 DOI: 10.1080/17410541.2025.2603166
Yanni Luo, Jinpeng Huang, Zhongcheng An, Xiaoping Zhang

Aim: This study aims to validate the relevance of IL-17A rs8193036 polymorphisms in susceptibility to Alzheimer's disease.

Materials and methods: A total of 210 healthy volunteers and 260 Alzheimer's disease patients were recruited. The genotype distribution of IL-17A rs8193036 was detected using the TaqMan-qPCR. The RT-qPCR was used to detect the expression of IL-17A in serum. The subjects of each genotype subgroup were statistically compared in terms of IL-17A expression and MMSE score. Logistic regression was used to analyze the independent risk factors for Alzheimer's disease.

Results: The CC genotypes of IL-17A rs8193036 showed a high distribution in Alzheimer's disease patients (χ2 = 8.115, OR = 1.879, 95% CI = 1.213-2.910, p = 0.004). The expression of IL-17A was higher, and the ROC curves showed the favorable diagnostic significance of IL-17A in Alzheimer's disease. The serum level of IL-17A was higher in Alzheimer's disease patients with the CC genotype than the TT and CT genotypes. MMSE score of the CC genotype patients was lower than TT and CT genotypes. Gender, Education, MMSE score, IL-17A expression, and rs8193036 CC genotypes were risk factors for Alzheimer's disease.

Conclusion: The expression level of IL-17A is higher in Alzheimer's disease patients. The CC genotype of IL-17A rs8193036 is the causative genotype of Alzheimer's disease.

目的:本研究旨在验证IL-17A rs8193036多态性与阿尔茨海默病易感性的相关性。材料与方法:共招募210名健康志愿者和260名阿尔茨海默病患者。采用TaqMan-qPCR检测IL-17A rs8193036基因型分布。采用RT-qPCR检测血清中IL-17A的表达。比较各基因型亚组患者IL-17A表达及MMSE评分。采用Logistic回归分析阿尔茨海默病的独立危险因素。结果:IL-17A rs8193036 CC基因型在阿尔茨海默病患者中分布较高(χ2 = 8.115, OR = 1.879, 95% CI = 1.213 ~ 2.910, p = 0.004)。IL-17A的表达较高,ROC曲线显示IL-17A在阿尔茨海默病中的良好诊断意义。CC基因型阿尔茨海默病患者血清IL-17A水平高于TT和CT基因型阿尔茨海默病患者。CC基因型患者MMSE评分低于TT和CT基因型患者。性别、教育程度、MMSE评分、IL-17A表达和rs8193036 CC基因型是阿尔茨海默病的危险因素。结论:IL-17A在阿尔茨海默病患者中表达水平较高。IL-17A rs8193036的CC基因型是阿尔茨海默病的致病基因型。
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引用次数: 0
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