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Revolutionizing personalized cancer treatment: the synergy of next-generation sequencing and CRISPR/Cas9. 革命性的个性化癌症治疗:下一代测序与 CRISPR/Cas9 的协同作用。
Pub Date : 2024-01-01 Epub Date: 2024-05-06 DOI: 10.1080/17410541.2024.2341610
Muniba Mahmood, Izza Taufiq, Sana Mazhar, Faiqa Hafeez, Kausar Malik, Samia Afzal

In the context of cancer heterogeneity, the synergistic action of next-generation sequencing (NGS) and CRISPR/Cas9 plays a promising role in the personalized treatment of cancer. NGS enables high-throughput genomic profiling of tumors and pinpoints specific mutations that primarily lead to cancer. Oncologists use this information obtained from NGS in the form of DNA profiling or RNA analysis to tailor precision strategies based on an individual's unique molecular signature. Furthermore, the CRISPR technique enables precise editing of cancer-specific mutations, allowing targeted gene modifications. Harnessing the potential insights of NGS and CRISPR/Cas9 heralds a remarkable frontier in cancer therapeutics with unprecedented precision, effectiveness and minimal off-target effects.

在癌症异质性的背景下,下一代测序(NGS)和 CRISPR/Cas9 的协同作用在癌症的个性化治疗中发挥着大有可为的作用。NGS 能够对肿瘤进行高通量基因组分析,并找出主要导致癌症的特定突变。肿瘤学家利用从 NGS 获得的这些信息,以 DNA 图谱或 RNA 分析的形式,根据个人独特的分子特征定制精准策略。此外,CRISPR 技术可对癌症特异性突变进行精确编辑,从而实现有针对性的基因修饰。利用 NGS 和 CRISPR/Cas9 的潜在洞察力,预示着癌症疗法将进入一个前所未有的前沿领域,具有前所未有的精确性、有效性和最小的脱靶效应。
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引用次数: 0
Impact of MIR137HG rs7554283 on susceptibility to high-altitude pulmonary edema in the Chinese population. MIR137HG rs7554283 对中国人群高海拔肺水肿易感性的影响
Pub Date : 2024-01-01 Epub Date: 2024-10-22 DOI: 10.1080/17410541.2024.2406738
Shilin Xu, Xuemei Li, Xuguang Li, Ruixiao Ma, Hengxun Zhang, Baoping Hu, Xue He, Tianbo Jin

Aim: MIR137 host gene (MIR137HG) variants were involved in a variety of diseases, but its role in high-altitude pulmonary edema (HAPE) has not been reported. The study aimed to study the association between MIR137HG single-nucleotide polymorphisms and HAPE risk in the Chinese population.Materials & methods: Based on the Plink software, odds ratio and 95% confidence interval were used for logistic regression analysis to evaluate the association between MIR137HG polymorphisms and the risk of HAPE.Results: We discovered that MIR137HG rs7554283 was associated with a reduced risk of HAPE. In both individuals older than 32 years and those younger than 32 years, we observed that rs7554283 was associated with a decreased risk of HAPE.Conclusion: In conclusion, MIR137HG rs7554283 may be related to a reduced susceptibility to HAPE in the Chinese population. These results provide a theoretical basis for the role of MIR137HG single-nucleotide polymorphisms in the occurrence of HAPE.

目的:MIR137宿主基因(MIR137HG)变异涉及多种疾病,但其在高海拔肺水肿(HAPE)中的作用尚未见报道。本研究旨在研究中国人群中 MIR137HG 单核苷酸多态性与 HAPE 风险之间的关联:基于Plink软件,采用几率比和95%置信区间进行Logistic回归分析,评估MIR137HG多态性与HAPE风险之间的关联:结果:我们发现 MIR137HG rs7554283 与 HAPE 风险降低有关。在年龄大于 32 岁和小于 32 岁的人群中,我们都观察到 rs7554283 与 HAPE 风险的降低有关:总之,在中国人群中,MIR137HG rs7554283 可能与 HAPE 易感性降低有关。这些结果为 MIR137HG 单核苷酸多态性在 HAPE 发生中的作用提供了理论依据。
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引用次数: 0
Long noncoding RNA polymorphisms in gynecological cancers. 妇科癌症中的长非编码 RNA 多态性。
Pub Date : 2024-01-01 Epub Date: 2023-12-14 DOI: 10.2217/pme-2023-0082
Esmat Abdi, Saeid Latifi-Navid, Alireza Panahi

Gynecological malignancies are one of the main causes of cancer-induced mortality. Despite remarkable recent therapeutic advances, current therapeutic options are not sufficient. Regarding the effect of long noncoding RNAs (lncRNAs) on cell differentiation, proliferation and apoptosis, variations in their expression cause different anomalies, such as tumorigenesis. SNPs influence lncRNA function and expression. LncRNA polymorphisms can predict cancer risk and are effective for early diagnosis and customized therapy. In this literature review, we comprehensively investigate the effect of lncRNA polymorphisms on gynecological cancers. LncRNA-related variants are proposed to evaluate cancer incidence, early detection and management of personalized therapy. Nonetheless, more studies are required to validate the consistency of current findings in numerous samples and across various ethnic groups.

妇科恶性肿瘤是导致癌症死亡的主要原因之一。尽管最近的治疗取得了令人瞩目的进展,但目前的治疗方案还不够充分。关于长非编码 RNA(lncRNA)对细胞分化、增殖和凋亡的影响,其表达的变化会导致不同的异常现象,如肿瘤发生。SNPs 会影响 lncRNA 的功能和表达。LncRNA 多态性可预测癌症风险,并对早期诊断和定制治疗有效。在这篇文献综述中,我们全面研究了lncRNA多态性对妇科癌症的影响。LncRNA相关变异可用于评估癌症发病率、早期检测和个性化治疗管理。尽管如此,还需要更多的研究来验证当前研究结果在众多样本和不同种族群体中的一致性。
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引用次数: 0
Optimizing vancomycin therapeutic drug monitoring compliance in pediatric oncology: towards personalized medication management. 优化万古霉素治疗药物监测在儿科肿瘤中的依从性:实现个性化用药管理。
Pub Date : 2024-01-01 Epub Date: 2024-07-04 DOI: 10.1080/17410541.2024.2360386
Rewan Gamal Mohamed, Rania Saber, Mohamed Ali Hussein, Amira Shalaby, Nouran Yasser, Sherif Kamal, Lobna Shalaby, Mohamed Nagy

Aim: Vancomycin, a crucial treatment for Gram-positive bacteria, necessitates therapeutic drug monitoring (TDM) to prevent treatment failures. We investigated the healthcare professional's compliance toward TDM of vancomycin recommendations and follow-up levels. Materials & methods: We collected data from 485 patients who received vancomycin in the Children's Cancer Hospital Egypt 57357 medical records system (Cerner) over 4 months, from January to April 2020. Results: Our data shows that only 54% of patients had TDM requests from healthcare professionals for the total patients who received vancomycin treatment. The healthcare professionals' compliance with the recommendations was 91.7%, while the follow-up levels were 66.7%. Conclusion: While overall adherence to recommendations is strong, enhancing compliance with follow-up levels remains a priority for improvement.

目的:万古霉素是治疗革兰氏阳性细菌的重要药物,必须进行治疗药物监测(TDM)以防止治疗失败。我们调查了医护人员对万古霉素治疗药物监测(TDM)建议和随访水平的依从性。材料与方法:我们收集了埃及儿童癌症医院 57357 医疗记录系统(Cerner)中 485 名接受万古霉素治疗的患者的数据,时间跨度为 4 个月,从 2020 年 1 月到 4 月。结果显示我们的数据显示,在所有接受万古霉素治疗的患者中,只有 54% 的患者向医护人员提出了 TDM 要求。医护人员对建议的依从性为 91.7%,而随访水平为 66.7%。结论:虽然对建议的总体依从性很高,但提高对随访水平的依从性仍是需要优先改进的地方。
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引用次数: 0
CYP2D6 genotyping and the clinical impact on outcomes in breast cancer tamoxifen-treated patients. CYP2D6基因分型及其对癌症他莫昔芬治疗患者预后的临床影响。
Pub Date : 2023-11-01 Epub Date: 2023-11-10 DOI: 10.2217/pme-2023-0063
Gabriel Ramírez, Marcelo Vital, Carolina Vergara, Florencia Carusso, Florencia Neffa, Adriana Della Valle, Patricia Esperón

Aims: To report the distribution of allele frequencies of CYP2D6 gene and to evaluate their influence on the clinical outcomes of a group of breast cancer patients receiving adjuvant tamoxifen treatment from Uruguay. Patients & methods: 199 samples were genotyped through real-time polymerase chain reaction assays. Metabolization profiles were inferred from the genotypes. Correlations were evaluated using Pearson's χ2 test. Results: Phenotype frequencies were 0.65 normal (NM), 0.30 intermediate (IM) and 0.05 poor metabolizers (PM). Similar clinical outcomes between NM and (PM + IM) patient groups (odds ratio = 1.011, 95% CI = 0.2703-3.7826; p = 0.987) were found. Conclusion: CYP2D6 allele frequencies were analyzed for the first time in a cohort from Uruguay. Results did not support any impact of CYP2D6 gene polymorphisms on clinical outcomes.

目的:报道CYP2D6基因等位基因频率的分布,并评估其对一组来自乌拉圭接受他莫昔芬辅助治疗的癌症患者临床结果的影响。患者和方法:通过实时聚合酶链式反应分析对199份样本进行基因分型。根据基因型推断代谢谱。相关性采用Pearsonχ2检验进行评估。结果:表型频率为0.65正常(NM)、0.30中间(IM)和0.05不良代谢者(PM)。NM和(PM+IM)患者组的临床结果相似(比值比=1.011,95%CI=0.2703-37826;p=0.987)。结论:首次在来自乌拉圭的队列中分析CYP2D6等位基因频率。结果不支持CYP2D6基因多态性对临床结果的任何影响。
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引用次数: 0
De novo variants of dominant monogenic disorders in Vietnam detected by a noninvasive prenatal test: a case series. 非侵入性产前检测在越南发现的显性单基因疾病的新变异:一个病例系列。
Pub Date : 2023-11-01 Epub Date: 2023-11-08 DOI: 10.2217/pme-2023-0105
Nhat-Thang Tran, Son Ta Vo, Duy-Anh Nguyen, Canh-Chuong Nguyen, Linh Thuy Dinh, Minh-Thu Thi Tran, Danh-Cuong Tran, Lan-Anh Thi Luong, Kim-Phuong Doan, Vu Quoc Huy Nguyen, Thi Minh Thi Ha, Linh-Giang Thi Truong, Phuong Thi-Mai Cao, Vy Thi-Nhat Tran, Thu Huong Nhut Trinh, Quang Thanh Le, Van Thong Nguyen, Diem-Tuyet Thi Hoang, My-Nhi Ba Nguyen, Chi-Thuong Bui, Son-Tra Thi Tran, Duc-Tam Lam, Hong-Thinh Le, My-Ngoc Ba Nguyen, Viet-Thang Ho, Minh-Trung Nguyen, Trang Thi Dao, Phuong Minh Nguyen, Thu-Hang Le Nguyen, Nhung Phuong Ha, Y-Thanh Lu, Thanh-Thuy Thi Do, Dinh-Kiet Truong, Minh-Duy Phan, Hoai-Nghia Nguyen, Hoa Giang, Hung-Sang Tang

Background: Noninvasive prenatal tests for monogenic diseases (NIPT-SGG) have recently been reported as helpful in early-stage antenatal screening. Our study describes the clinical and genetic features of cases identified by NIPT-SGG. Materials & methods: In a cohort pregnancy with abnormal sonograms, affected cases were confirmed by invasive diagnostic tests concurrently, with NIPT-SGG targeting 25 common dominant single-gene diseases. Results: A total of 13 single-gene fetuses were confirmed, including Noonan and Costello syndromes, thanatophoric dysplasia, achondroplasia, osteogenesis imperfecta and Apert syndrome. Two novel variants seen were tuberous sclerosis complex (TSC2 c.4154G>A) and Alagille syndrome (JAG1 c.3452del). Conclusion: NIPT-SGG and standard tests agree on the results for 13 fetuses with monogenic disorders. This panel method of screening can benefit high-risk Vietnamese pregnancies, but further research is encouraged to expand on the causative gene panel.

背景:单基因疾病的无创产前检查(NIPT-SGG)最近被报道有助于早期产前筛查。我们的研究描述了NIPT-SGG鉴定的病例的临床和遗传特征。材料与方法:在一个有异常声像图的队列妊娠中,同时通过侵入性诊断测试确认受影响的病例,NIPT-SGG针对25种常见的显性单基因疾病。结果:共确认13例单基因胎儿,包括Noonan和Costello综合征、先天性软骨发育不良、软骨发育不全、成骨不全和Apert综合征。两种新的变体是结节性硬化综合征(TSC2 c.4154G>A)和Alagille综合征(JAG1 c.3452del)。结论:NIPT-SGG和标准测试对13例单基因疾病胎儿的结果一致。这种小组筛查方法可以使高危越南妊娠受益,但鼓励进一步研究致病基因小组。
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引用次数: 0
IL-6 gene polymorphism predicts PEGylated IFN-α treatment response in hepatitis B surface antigen-positive chronic hepatitis B patients. IL-6基因多态性预测乙型肝炎表面抗原阳性慢性乙型肝炎患者聚乙二醇化IFN-α治疗反应。
Pub Date : 2023-11-01 DOI: 10.2217/pme-2023-0089
Xiaoqing Wang, Xiu Gu, Fengli Liu

Background: Genetic polymorphism can affect the response to antiviral therapy of chronic hepatitis B (CHB) patients. Objective: The study examined the genetic association of the IL-6 rs1800796 polymorphism with PEGylated IFN-α (PegIFN-α) treatment response in hepatitis B surface antigen (HBsAg)-positive CHB patients. Methods: Direct sequencing was done for the genotyping of the rs1800796 polymorphism in the serum of CHB patients. Results: More patients with combined response (n = 95) carried IL-6 rs1800796 GC genotypes, while CC genotype carriers possessed reduced HBeAg seroconversion rate and high values of hepatitis B virus DNA. Baseline HBsAg and HBeAg and IL-6 rs1800796 CC genotype were independently related to PegIFN-α treatment response. Conclusion: Detection of the IL-6 rs1800796 genotype in CHB patients may have potential guiding significance for PegIFN-α response.

背景:遗传多态性可影响慢性乙型肝炎(CHB)患者对抗病毒治疗的反应。目的:探讨乙型肝炎表面抗原(HBsAg)阳性慢性乙型肝炎患者IL-6 rs1800796多态性与聚乙二醇化干扰素-α(PegIFN-α)治疗反应的遗传相关性。方法:对慢性乙型肝炎患者血清rs1800796多态性进行直接测序。结果:有联合反应的患者(n=95)携带IL-6 rs1800796 GC基因型,而CC基因型携带者的HBeAg血清转化率降低,乙型肝炎病毒DNA值较高。基线HBsAg、HBeAg和IL-6 rs1800796 CC基因型与PegIFN-α治疗反应独立相关。结论:检测慢性乙型肝炎患者IL-6 rs1800796基因型可能对PegIFN-α反应具有潜在的指导意义。
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引用次数: 0
LncRNA polymorphisms and lung cancer risk. LncRNA多态性与癌症风险。
Pub Date : 2023-11-01 Epub Date: 2023-11-02 DOI: 10.2217/pme-2023-0081
Esmat Abdi, Saeid Latifi-Navid, Alireza Panahi, Hamid Latifi-Navid

Lung cancer (LC) imposes a significant burden, and is associated with high mortality and morbidity among malignant tumors. Aberrant expression of particular lncRNAs is closely linked to LC. LncRNA polymorphisms cause abnormal expression levels and/or structural dysfunction. They can affect the progression of cancer, survival, response to chemotherapy and recurrence rates in cancer patients. The present article provides a comprehensive overview of the effect of lncRNA genetic polymorphisms on LC. It is proposed that lncRNA-related variants can be used to predict cancer risk and therapeutic outcomes. More large-scale trials on diverse ethnic groups are required to validate the results, thus personalizing LC therapy based on lncRNA genotypes.

癌症(LC)是一个巨大的负担,并与恶性肿瘤的高死亡率和高发病率有关。特定LncRNA的异常表达与LC密切相关。LncRNA多态性导致表达水平异常和/或结构功能障碍。它们可以影响癌症患者的进展、生存率、对化疗的反应和复发率。本文全面综述了lncRNA基因多态性对LC的影响,提出lncRNA相关变异可用于预测癌症风险和治疗结果。需要对不同种族群体进行更大规模的试验来验证结果,从而根据lncRNA基因型对LC治疗进行个性化。
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引用次数: 0
A real-world analysis of tyrosine receptor kinase inhibitor-related toxicities in cancer treatment. 癌症治疗中酪氨酸受体激酶抑制剂相关毒性的现实世界分析。
Pub Date : 2023-11-01 DOI: 10.2217/pme-2023-0072
Wenjie Li, Keshan Wen, Weijie Zhu, Shangfei Luo

Background: This study analyzed real-world data from 2004 to 2023 to evaluate the toxicity profile of tyrosine receptor kinase (TRK) inhibitor therapy. Method: A retrospective analysis of US FDA Adverse Event Reporting System data was conducted to identify adverse events in patients receiving TRK inhibitor therapy. Result: Entrectinib demonstrated toxicities primarily in the cardiovascular and nervous systems, followed by the renal and urinary system. Common adverse effects included dizziness, renal impairment, constipation, heart failure and taste disorders. Larotrectinib induced adverse events mainly in the hepatobiliary and nervous systems, with peripheral neuropathy, myalgia, renal impairment and increased alanine aminotransferase commonly reported. Conclusion: Careful monitoring and supportive care strategies are essential for managing adverse events associated with TRK inhibitor therapy.

背景:本研究分析了2004年至2023年的真实世界数据,以评估酪氨酸受体激酶(TRK)抑制剂治疗的毒性。方法:对美国食品药品监督管理局不良事件报告系统的数据进行回顾性分析,以确定接受TRK抑制剂治疗的患者的不良事件。结果:Entrectinib的毒性主要表现在心血管和神经系统,其次是肾脏和泌尿系统。常见的不良反应包括头晕、肾功能损害、便秘、心力衰竭和味觉障碍。拉罗替尼引起的不良事件主要发生在肝胆和神经系统,常见的有周围神经病变、肌痛、肾损伤和丙氨酸氨基转移酶升高。结论:谨慎的监测和支持性护理策略对于管理TRK抑制剂治疗相关的不良事件至关重要。
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引用次数: 0
Low rate of complications in nipple-sparing mastectomy for patients with BRCA1 and BRCA2 mutation. BRCA1和BRCA2突变患者保留乳头乳房切除术并发症发生率低。
Pub Date : 2023-11-01 DOI: 10.2217/pme-2023-0084
Antônio Luiz Frasson, Ana Beatriz Falcone, Fernanda Barbosa, Alessandra Borba Anton de Souza, Carolina Malhone, Isabela Miranda, Betina Vollbrecht, Monica Adriana Rodriguez Martinez Frasson, Luiza Kobe, Martina Lichtenfels

Background: To describe the indications and outcomes of BRCA mutation carriers undergoing nipple-sparing mastectomy (NSM). Methods: In this retrospective study, 76 BRCA mutation carriers with no cancer who opted to undergo risk reduction NSM or diagnosed with breast cancer (BC) who opted to undergo therapeutic NSM were included. Results: Indications for NSM: cancer treatment (n = 33), bilateral risk reduction (n = 39) and contralateral prophylactic NSM (n = 4). In a mean follow-up of 45 months (median: 30 months), one patient (2.5%) undergoing risk-reducing NSM developed a new BC. One (3%) local, one (3%) ipsilateral axillary and one (3%) distant recurrence were observed in BC patients. No partial or total nipple necrosis occurred. Conclusion: NSM is safe for reducing the risk of BC development in BRCA mutation carriers and for treating cancer.

背景:描述BRCA突变携带者接受保留乳头乳房切除术(NSM)的适应症和结果。方法:在这项回顾性研究中,包括76名选择接受风险降低NSM的无癌症BRCA突变携带者或选择接受治疗性NSM的癌症(BC)患者。结果:NSM适应症:癌症治疗(n=33)、双侧风险降低(n=39)和对侧预防性NSM(n=4)。在平均45个月(中位数:30个月)的随访中,一名接受风险降低NSM的患者(2.5%)出现了新的BC。BC患者中观察到一例(3%)局部复发,一例(3%)同侧腋窝复发和一例(300%)远处复发。未出现乳头部分或全部坏死。结论:NSM对降低BRCA突变携带者BC发生风险和治疗癌症是安全的。
{"title":"Low rate of complications in nipple-sparing mastectomy for patients with <i>BRCA1</i> and <i>BRCA2</i> mutation.","authors":"Antônio Luiz Frasson, Ana Beatriz Falcone, Fernanda Barbosa, Alessandra Borba Anton de Souza, Carolina Malhone, Isabela Miranda, Betina Vollbrecht, Monica Adriana Rodriguez Martinez Frasson, Luiza Kobe, Martina Lichtenfels","doi":"10.2217/pme-2023-0084","DOIUrl":"10.2217/pme-2023-0084","url":null,"abstract":"<p><p><b>Background:</b> To describe the indications and outcomes of <i>BRCA</i> mutation carriers undergoing nipple-sparing mastectomy (NSM). <b>Methods:</b> In this retrospective study, 76 <i>BRCA</i> mutation carriers with no cancer who opted to undergo risk reduction NSM or diagnosed with breast cancer (BC) who opted to undergo therapeutic NSM were included. <b>Results:</b> Indications for NSM: cancer treatment (n = 33), bilateral risk reduction (n = 39) and contralateral prophylactic NSM (n = 4). In a mean follow-up of 45 months (median: 30 months), one patient (2.5%) undergoing risk-reducing NSM developed a new BC. One (3%) local, one (3%) ipsilateral axillary and one (3%) distant recurrence were observed in BC patients. No partial or total nipple necrosis occurred. <b>Conclusion:</b> NSM is safe for reducing the risk of BC development in <i>BRCA</i> mutation carriers and for treating cancer.</p>","PeriodicalId":94167,"journal":{"name":"Personalized medicine","volume":" ","pages":"493-501"},"PeriodicalIF":0.0,"publicationDate":"2023-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71430634","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Personalized medicine
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