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Canadian journal of biochemistry and cell biology = Revue canadienne de biochimie et biologie cellulaire最新文献

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Beneficial effects of nontoxic ozone on H2O2-induced stress and inflammation. 无毒臭氧对h2o2诱导的应激和炎症的有益作用。
Altug Kuçukgul, S. Erdogan, Ramazan Gonenci, Gonca Ozan
In this study, the anti-oxidant and anti-inflammatory efficacy of ozone oxidative preconditioning (OOP) were investigated on hydrogen peroxide (H2O2)-induced human lung alveolar cells. In MTT and trypan blue viability tests, while 100 μmol/L H2O2 caused a 17.3% and 21.9% decrease in the number of living cells, respectively, ozone at 20 μmol/L regenerated cell proliferation and prevented 9.6% and 11.0% of cell loss, respectively. In addition, H2O2 decreased the transcription levels of catalase (CAT), glutathione peroxidase (GPx), and superoxide dismutase (SOD) 5.43-, 2.89-, and 5.33-fold, respectively, while it increased Bax, NF-κβ, TNF-α, and iNOS expression 1.57-, 1.32-, 1.40-, and 1.41-fold, respectively. Ozone pretreatment, however, increased CAT, GPx, and SOD transcription levels 7.08-, 5.17-, and 6.49-fold and decreased Bax, NF-κβ, TNF-α, and iNOS transcriptions by 1.25-, 0.76-, 3.63-, and 7.91-fold, respectively. Moreover, intracellular glutathione (GSH) level and SOD activity were decreased by 46.2% and 45.0% in the H2O2 treatment group, and OOP recovered 58.5% and 20.1% of the decreases caused by H2O2. H2O2 also increased nitrite levels 7.84-fold, and OOP reduced this increase by half. Consequently, OOP demonstrated potent anti-oxidant and anti-inflammatory effects on in vitro model of oxidative stress-induced lung injury.
本实验研究了臭氧氧化预处理(OOP)对过氧化氢(H2O2)诱导的人肺泡细胞的抗氧化和抗炎作用。在MTT和台盼蓝活力试验中,100 μmol/L的H2O2分别使活细胞数量减少17.3%和21.9%,而20 μmol/L的臭氧使细胞增殖再生,分别防止了9.6%和11.0%的细胞损失。H2O2使过氧化氢酶(CAT)、谷胱甘肽过氧化物酶(GPx)和超氧化物歧化酶(SOD)的转录水平分别降低5.43-、2.89-和5.33倍,使Bax、NF-κβ、TNF-α和iNOS的表达分别升高1.57-、1.32-、1.40-和1.41倍。然而,臭氧预处理使CAT、GPx和SOD的转录水平分别提高7.08倍、5.17倍和6.49倍,使Bax、NF-κβ、TNF-α和iNOS的转录水平分别降低1.25倍、0.76倍、3.63倍和7.91倍。H2O2处理组细胞内谷胱甘肽(GSH)水平和SOD活性分别降低46.2%和45.0%,OOP恢复了H2O2引起的58.5%和20.1%的损伤。H2O2也使亚硝酸盐含量增加了7.84倍,而OOP将这一增加减少了一半。结果表明,OOP对体外氧化应激性肺损伤模型具有较强的抗氧化和抗炎作用。
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引用次数: 12
MicroRNA-149 is epigenetically silenced tumor-suppressive microRNA, involved in cell proliferation and downregulation of AKT1 and cyclin D1 in human glioblastoma multiforme. microRNA -149是一种表观遗传沉默的肿瘤抑制microRNA,参与人多形性胶质母细胞瘤细胞增殖和AKT1和cyclin D1的下调。
A. Ghasemi, S. Fallah, M. Ansari
Aberrant DNA methylation has been shown to inactivate tumor suppressor genes during carcinogenesis. MicroRNA-149 (miR-149) was recently demonstrated to function as a tumor suppressor gene in glioblastoma multiforme (GBM). However, the potential linkage of miR-149 levels and the underlying epigenetic regulatory mechanism in human GBM has not been studied. We used quantitative real-time polymerase chain reaction to investigate the levels of miR-149 in GBM tissues, their matched adjacent normal tissues, and glioblastoma U87MG cell line. Using bisulfite genomic sequencing technology, DNA methylation status of upstream region of miR-149 was evaluated in study population groups and the U87MG cell line. After treatment of cells with 5-aza-2'-deoxycitidine (5-aza-dC), the DNA methylation status, gene expression, and target protein levels of miR-149 were investigated. Our studies revealed that methylation and expression levels of miR-149 were significantly increased and decreased, respectively in GBM patients relative to the adjacent normal tissues (P < 0.01). MiR-149 suppressed the expression of AKT1 and cyclin D1 and reduced the proliferative activities of the U87MG cell line. Treatment of U87MG cells with 5-aza-dC reversed the hypermethylation status of miR-149, enhanced the expression of its gene, and decreased target mRNA and proteins levels (P < 0.01). These findings suggest that the methylation mechanism is associated with decreased expression levels of miR-149, which may in turn lead to the increased levels of its oncogenic target proteins.
异常DNA甲基化已被证明在癌变过程中使肿瘤抑制基因失活。MicroRNA-149 (miR-149)最近被证明在多形性胶质母细胞瘤(GBM)中起肿瘤抑制基因的作用。然而,miR-149水平与人类GBM中潜在的表观遗传调控机制的潜在联系尚未得到研究。我们使用实时定量聚合酶链反应研究了miR-149在GBM组织、其匹配的邻近正常组织和胶质母细胞瘤U87MG细胞系中的水平。利用亚硫酸氢盐基因组测序技术,在研究群体和U87MG细胞系中评估miR-149上游区域的DNA甲基化状态。用5-aza-2'-脱氧胞苷(5-aza-dC)处理细胞后,研究miR-149的DNA甲基化状态、基因表达和靶蛋白水平。我们的研究发现,相对于邻近的正常组织,GBM患者中miR-149的甲基化和表达水平分别显著升高和降低(P < 0.01)。MiR-149抑制AKT1和cyclin D1的表达,降低U87MG细胞系的增殖活性。5-aza-dC处理U87MG细胞可逆转miR-149的高甲基化状态,增强其基因表达,降低靶mRNA和蛋白水平(P < 0.01)。这些发现表明,甲基化机制与miR-149表达水平下降有关,这可能反过来导致其致癌靶蛋白水平升高。
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引用次数: 19
Meeting report from the 58th Annual Meeting of the CSMB: Lipids - the membrane and beyond. 来自CSMB第58届年会的会议报告:脂质-膜及其他。
B. Karten, J. Rainey
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引用次数: 0
Corrigendum: Therapeutic role of a synthesized calcium phosphate nanocomposite material on hepatocarcinogenesis in rats. 勘误:合成磷酸钙纳米复合材料对大鼠肝癌发生的治疗作用。
M. Mohammed, E. Abdel-Gawad, Sameh A. Awwad, E. Kandil, Basma El-Agamya
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引用次数: 0
Cost-effective elimination of lipofuscin fluorescence from formalin-fixed brain tissue by white phosphor light emitting diode array. 白磷发光二极管阵列消除福尔马林固定脑组织中脂褐素荧光的成本效益。
Yulong Sun, A. Chakrabartty
Autofluorescence of aldehyde-fixed tissues greatly hinders fluorescence microscopy. In particular, lipofuscin, an autofluorescent component of aged brain tissue, complicates fluorescence imaging of tissue in neurodegenerative diseases. Background and lipofuscin fluorescence can be reduced by greater than 90% through photobleaching using white phosphor light emitting diode arrays prior to treatment with fluorescent probes. We compared the effect of photobleaching versus established chemical quenchers on the quality of fluorescent staining in formalin-fixed brain tissue of frontotemporal dementia with tau-positive inclusions. Unlike chemical quenchers, which reduced fluorescent probe signals as well as background, photobleaching treatment had no effect on probe fluorescence intensity while it effectively reduced background and lipofuscin fluorescence. The advantages and versatility of photobleaching over established methods are discussed.
醛固定组织的自身荧光极大地阻碍了荧光显微镜。特别是,脂褐素,衰老脑组织的自荧光成分,使神经退行性疾病组织的荧光成像复杂化。背景和脂褐素荧光可以减少90%以上,通过光漂白使用白色荧光粉发光二极管阵列与荧光探针处理之前。我们比较了光漂白与现有化学猝灭剂对福尔马林固定的tau阳性包体额颞叶痴呆脑组织荧光染色质量的影响。与化学猝灭剂降低荧光探针信号和背景不同,光漂白处理对探针荧光强度没有影响,但能有效降低背景和脂褐素荧光。讨论了光漂白相对于现有方法的优点和通用性。
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引用次数: 11
ESCRTs and associated proteins in lysosomal fusion with endosomes and autophagosomes. escrt和溶酶体与核内体和自噬体融合的相关蛋白。
P. Majumder, Oishee Chakrabarti
Endolysosomal and autophagosomal degradation pathways are highly connected at various levels, sharing multiple molecular effectors that modulate them individually or simultaneously. These two lysosomal degradative pathways are primarily involved in the disposal of cargo internalized from the cell surface or long-lived proteins or aggregates and aged organelles present in the cytosol. Both of these pathways involve a number of carefully regulated vesicular fusion events that are dependent on ESCRT proteins. The ESCRT proteins especially ESCRT-I and III participate in the regulation of fusion events between autophagosome/amphisome and lysosome. Along with these, a number of functionally diverse ESCRT associated and regulatory proteins such as, endosomal PtdIns (3) P 5-kinase Fab1, ALIX, mahogunin ring finger 1, atrogin 1, syntaxin 17, ATG12-ATG3 complex, and protein kinase CK2α are involved in fusion events in either or both the lysosomal degradative pathways.
内溶酶体和自噬体降解途径在不同水平上高度连接,共享多个单独或同时调节它们的分子效应。这两种溶酶体降解途径主要涉及处理细胞表面内化的货物或存在于细胞质中的长寿命蛋白质或聚集体和老化细胞器。这两种途径都涉及许多依赖于ESCRT蛋白的精心调节的囊泡融合事件。ESCRT蛋白特别是ESCRT- i和ESCRT- III参与调节自噬体/两性体与溶酶体之间的融合事件。除此之外,许多功能多样的ESCRT相关蛋白和调节蛋白,如内体PtdIns (3) p5 -kinase Fab1、ALIX、mahogunin ring finger 1、atrogin 1、syntaxin 17、ATG12-ATG3复合物和蛋白激酶CK2α都参与溶酶体降解途径中的融合事件。
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引用次数: 3
Regulation of expression of the p21CIP1 gene by the transcription factor ZNF217 and MDM2. 转录因子ZNF217和MDM2对p21CIP1基因表达的调控。
Aglaia Mantsou, E. Koutsogiannouli, Costas Haitoglou, A. Papavassiliou, N. Papanikolaou
Using mouse double minute 2 (MDM2) protein-specific affinity chromatography and mass spectrometry, we have isolated the protein product of the oncogene znf217, which is a transcription factor and a component of a Hela-S-derived HDAC1 complex, as a novel MDM2-interacting protein. When co-expressed in cultured cancer cells, ZNF217 forms a complex with MDM2 and its ectopic over-expression reduces the steady-state levels of acetylated p53 in cell lines, suppressing its ability to activate the expression of a p21 promoter construct. In-silico analysis of the p21 promoter revealed the presence of several ZNF217-binding sites. These findings suggest that MDM2 controls p21 expression by at least 2 mechanisms: through ZNF217-mediated recruitment of HDAC1/MDM2 activity, which inhibits p53 acetylation; and through direct interaction with its binding site(s) on the p21 promoter.
利用小鼠双分钟2 (MDM2)蛋白特异性亲和色谱和质谱技术,我们分离出了致癌基因znf217的蛋白产物,它是一种转录因子,也是hela -s衍生的HDAC1复合体的组成部分,是一种新的MDM2相互作用蛋白。当在培养的癌细胞中共表达时,ZNF217与MDM2形成复合物,其异位过表达降低了细胞系中乙酰化p53的稳态水平,抑制了其激活p21启动子结构表达的能力。p21启动子的计算机分析显示存在几个znf217结合位点。这些发现表明,MDM2通过至少两种机制控制p21的表达:通过znf217介导的HDAC1/MDM2活性募集,抑制p53乙酰化;并通过与p21启动子上的结合位点直接相互作用。
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引用次数: 5
Physico-chemical and in-silico analysis of a phytocystatin purified from Brassica juncea cultivar RoAgro 5444. 从芥菜品种RoAgro 5444中纯化的植物胱抑素的理化和计算机分析。
Shumaila Khan, Sabahuddin Ahmad, M. Siddiqi, B. Bano
This study describes the isolation and purification of a phytocystatin from seeds of Brassica juncea (Indian mustard; cultivar RoAgro 5444), which is an important oilseed crop both agriculturally and economically. The protein was purified by gel filtration chromatography with 24.3% yield and 204-fold purification, and visualised by 2D gel electrophoresis. The 18.1 kDa mustard cystatin was highly specific for cysteine proteinases. The plant cystatin inhibited cathepsin B, confirming its role in conferring pest resistance. The inhibitor was highly stable over a pH range of 3-10 and retained significant inhibitory potential up to 70 °C. The stoichiometry of its interaction with papain, determined by isothermal calorimetry, suggests a 1:1 complex. Secondary structural elements calculated by far-UV circular dichroism (CD) spectroscopy show an 18.8% α-helical and 21% β-sheet structure. The protein was a non-competitive inhibitor of thiol proteinases. The Stokes radius and frictional co-efficient were used to describe the shape and size of the protein. Homology modelling and docking studies proposed a prototype illustrating the Brassica phytocystatin mediated papain inhibition. Molecular dynamics (MD) study revealed the excellent stability of the papain-phytocystatin complex during a simulation for 100 ns. Detailed results identify the mustard cystatin as an important member of the phytocystatin family.
从芥菜中分离纯化了一种植物胱抑素;栽培品种RoAgro 5444),是一种重要的农业和经济油料作物。该蛋白通过凝胶过滤层析纯化,得率为24.3%,纯化倍数为204倍,并通过二维凝胶电泳显示。18.1 kDa的芥菜胱抑素对半胱氨酸蛋白酶具有高度特异性。植物胱抑素抑制组织蛋白酶B,证实其在赋予害虫抗性中的作用。该抑制剂在3-10的pH范围内高度稳定,并在70°C内保持显著的抑制潜力。通过等温量热法测定其与木瓜蛋白酶相互作用的化学计量,表明其配合物为1:1。通过远紫外圆二色性(CD)光谱计算得到二级结构元素为18.8%的α-螺旋结构和21%的β-片状结构。该蛋白是巯基蛋白酶的非竞争性抑制剂。斯托克斯半径和摩擦系数被用来描述蛋白质的形状和大小。同源建模和对接研究提出了一个说明芸苔植物胱抑素介导的木瓜蛋白酶抑制的原型。分子动力学(MD)研究表明,木瓜-植物胱抑素复合物在100 ns的模拟过程中具有良好的稳定性。详细的结果表明,芥菜半胱氨酸抑制素是植物半胱氨酸抑制素家族的重要成员。
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引用次数: 8
Characterization of mussel H2A.Z.2: a new H2A.Z variant preferentially expressed in germinal tissues from Mytilus. 贻贝H2A.Z的表征。2:新的H2A。Z变异优先在Mytilus的生发组织中表达。
C. Rivera-Casas, R. González-Romero, Ángel Vizoso-Vázquez, Manjinder S. Cheema, M. Cerdán, J. Méndez, J. Ausió, J. Eirín-López
Histones are the fundamental constituents of the eukaryotic chromatin, facilitating the physical organization of DNA in chromosomes and participating in the regulation of its metabolism. The H2A family displays the largest number of variants among core histones, including the renowned H2A.X, macroH2A, H2A.B (Bbd), and H2A.Z. This latter variant is especially interesting because of its regulatory role and its differentiation into 2 functionally divergent variants (H2A.Z.1 and H2A.Z.2), further specializing the structure and function of vertebrate chromatin. In the present work we describe, for the first time, the presence of a second H2A.Z variant (H2A.Z.2) in the genome of a non-vertebrate animal, the mussel Mytilus. The molecular and evolutionary characterization of mussel H2A.Z.1 and H2A.Z.2 histones is consistent with their functional specialization, supported on sequence divergence at promoter and coding regions as well as on varying gene expression patterns. More precisely, the expression of H2A.Z.2 transcripts in gonadal tissue and its potential upregulation in response to genotoxic stress might be mirroring the specialization of this variant in DNA repair. Overall, the findings presented in this work complement recent reports describing the widespread presence of other histone variants across eukaryotes, supporting an ancestral origin and conserved role for histone variants in chromatin.
组蛋白是真核染色质的基本成分,促进染色体中DNA的物理组织并参与其代谢的调节。H2A家族在核心组蛋白中显示出最多的变体,包括著名的H2A。X macroH2A H2A。B (Bbd)和H2A.Z。后一种变体特别有趣,因为它的调节作用和分化成2个功能不同的变体(H2A.Z.)。1和H2A.Z.2),进一步专门化脊椎动物染色质的结构和功能。在目前的工作中,我们首次描述了第二个H2A的存在。非脊椎动物贻贝贻贝基因组中的Z变异(H2A.Z.2)。贻贝H2A.Z的分子和进化特征。1和haa。组蛋白与它们的功能专门化是一致的,这是由启动子和编码区的序列分化以及不同的基因表达模式所支持的。更准确地说,h2a。z。生殖腺组织中的2转录本及其在基因毒性应激反应中的潜在上调可能反映了该变体在DNA修复中的专门化。总的来说,这项工作的发现补充了最近的报道,这些报道描述了真核生物中广泛存在的其他组蛋白变异,支持组蛋白变异在染色质中的祖先起源和保守作用。
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引用次数: 10
Rapamycin alleviates oxidative stress-induced damage in rat erythrocytes. 雷帕霉素可减轻氧化应激引起的大鼠红细胞损伤。
A. Singh, Sandeep Singh, Geetika Garg, S. Rizvi
An imbalanced cellular redox system promotes the production of reactive oxygen species (ROS) that may lead to oxidative stress-mediated cell death. Erythrocytes are the best-studied model of antioxidant defense mechanism. The present study was undertaken to investigate the effect of the immunosuppressant drug rapamycin, an inducer of autophagy, on redox balance of erythrocytes and blood plasma of oxidatively challenged rats. Male Wistar rats were oxidatively challenged with HgCl2 (5 mg/kg body mass (b.m.)). A significant (p < 0.05) induction in ROS production, plasma membrane redox system (PMRS), intracellular Ca2+ influx, lipid peroxidation (LPO), osmotic fragility, plasma protein carbonyl (PCO) content, and plasma advanced oxidation protein products (AOPP) and simultaneously significant reduction in glutathione (GSH) level and ferric reducing ability of plasma (FRAP) were observed in rats exposed to HgCl2. Furthermore, rapamycin (0.5 mg/kg b.m.) provided significant protection against HgCl2-induced alterations in rat erythrocytes and plasma by reducing ROS production, PMRS activity, intracellular Ca2+ influx, LPO, osmotic fragility, PCO content, and AOPP and also restored the level of antioxidant GSH and FRAP. Our observations provide evidence that rapamycin improves redox status and attenuates oxidative stress in oxidatively challenged rats. Our data also demonstrate that rapamycin is a comparatively safe immunosuppressant drug.
不平衡的细胞氧化还原系统促进活性氧(ROS)的产生,这可能导致氧化应激介导的细胞死亡。红细胞是研究最多的抗氧化防御机制模型。本研究旨在探讨自噬诱导剂免疫抑制剂雷帕霉素对氧化应激大鼠红细胞和血浆氧化还原平衡的影响。雄性Wistar大鼠用HgCl2 (5 mg/kg体重)氧化刺激。暴露于HgCl2的大鼠ROS生成、质膜氧化还原系统(PMRS)、细胞内Ca2+内流、脂质过氧化(LPO)、渗透脆性、血浆蛋白羰基(PCO)含量和血浆高级氧化蛋白产物(AOPP)显著(p < 0.05)诱导,同时谷胱甘肽(GSH)水平和血浆铁还原能力(FRAP)显著降低。此外,雷帕霉素(0.5 mg/kg b.m)通过降低ROS生成、PMRS活性、细胞内Ca2+内流、LPO、渗透脆性、PCO含量和AOPP,对hgcl2诱导的大鼠红细胞和血浆的改变提供了显著的保护,并恢复了抗氧化剂GSH和FRAP的水平。我们的观察提供了证据,雷帕霉素改善氧化应激大鼠的氧化还原状态并减轻氧化应激。我们的数据还表明,雷帕霉素是一种相对安全的免疫抑制药物。
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引用次数: 40
期刊
Canadian journal of biochemistry and cell biology = Revue canadienne de biochimie et biologie cellulaire
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