Pub Date : 2023-03-01DOI: 10.1016/j.imj.2022.12.002
Régis Verdier , Clarisse Marchal , Manon Belhassen , Marie Le Pannerer , Nicole Guiso , Robert Cohen
The French National Immunization Program was updated in 2013 for vaccination against diphtheria, tetanus, pertussis, and poliomyelitis. Our previous findings on the evolution of age-specific booster vaccination coverage rates (VCRs) up to 2017 suggested suboptimal vaccination coverages due to the pre-2013 recommendation-residual vaccination practices. In the current analysis, we evaluated all age-specific booster VCR and distribution of age at vaccination visits in 2018. In this retrospective observational cohort study, the cumulative booster VCRs were updated at all vaccination visits up to 2018 among the people who were eligible for a booster vaccination, using a 1/97th random sample of French national healthcare reimbursement databases. The cumulative booster VCR for individuals from all age groups increased from 2017 to 2018, except for 85-years-old vaccination visit. Majority of the individuals from all age groups were vaccinated (boosted) with a vaccine containing the pertussis valence. In 2018, sharp peaks corresponding to the recommended ages for booster vaccination visits were observed for individuals aged 6, 11 to 13, 25, 45, and 65 years. Our study reiterates suboptimal coverages in France and implies the need for booster vaccination throughout life for the protection of the population.
{"title":"Coverage rates for diphtheria, tetanus, poliomyelitis, and pertussis age-specific booster recommendations in France: 2018 update of the real-world cohort analysis","authors":"Régis Verdier , Clarisse Marchal , Manon Belhassen , Marie Le Pannerer , Nicole Guiso , Robert Cohen","doi":"10.1016/j.imj.2022.12.002","DOIUrl":"https://doi.org/10.1016/j.imj.2022.12.002","url":null,"abstract":"<div><p>The French National Immunization Program was updated in 2013 for vaccination against diphtheria, tetanus, pertussis, and poliomyelitis. Our previous findings on the evolution of age-specific booster vaccination coverage rates (VCRs) up to 2017 suggested suboptimal vaccination coverages due to the pre-2013 recommendation-residual vaccination practices. In the current analysis, we evaluated all age-specific booster VCR and distribution of age at vaccination visits in 2018. In this retrospective observational cohort study, the cumulative booster VCRs were updated at all vaccination visits up to 2018 among the people who were eligible for a booster vaccination, using a 1/97th random sample of French national healthcare reimbursement databases. The cumulative booster VCR for individuals from all age groups increased from 2017 to 2018, except for 85-years-old vaccination visit. Majority of the individuals from all age groups were vaccinated (boosted) with a vaccine containing the pertussis valence. In 2018, sharp peaks corresponding to the recommended ages for booster vaccination visits were observed for individuals aged 6, 11 to 13, 25, 45, and 65 years. Our study reiterates suboptimal coverages in France and implies the need for booster vaccination throughout life for the protection of the population.</p></div>","PeriodicalId":100667,"journal":{"name":"Infectious Medicine","volume":"2 1","pages":"Pages 51-56"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50194900","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-03-01DOI: 10.1016/j.imj.2023.01.002
Mei Hung Joanna Leung, Kin Hang Kung, Ian Siu-kiu Yau, Yan Yee Fung, Kirran Nazesh Mohammad, Cheong Chi Andrew Lau, Ka Wing Albert Au, Shuk Kwan Chuang
Background
COVID-19 outbreaks in residential care homes for the elderly (RCHEs) and for persons with disability (RCHDs) have caused significant morbidity and mortality during 5th epidemic in Hong Kong. This article reviewed COVID-19 outbreaks situation and estimated the effectiveness of receiving at least two-dose of COVID-19 vaccine in preventing severe outcomes.
Methods
To estimate attack rates and vaccination coverage, documentation on COVID-19 infection and their vaccination records of residential care homes (RCH) residents reported between December 31, 2021 and May 31, 2022 were reviewed, and infected cases were follow-up for 4 weeks for severe outcomes or death. Correlation between vaccination coverage against attack rate by types of homes was examined. Infected RCH residents with available information were included in the analysis of vaccine effectiveness against severe outcomes and death.
Results
COVID-19 vaccination coverage was low in RCHDs (median 0.46, IQR: 0.24–0.76) and very low in RCHEs (median 0.08, IQR: 0.00–0.19). Higher attack rates were recorded among RCHE residents (median 0.84, IQR: 0.64–0.93) and higher case fatality rate (CFR: 28.1%) than in RCHDs (median 0.58, IQR: 0.31–0.84; CFR: 3.9%). The attack rate decreased when vaccination coverage increased for both RCHEs (ρ = −0.131, p < 0.001) and RCHDs (ρ = −0.333, p < 0.001). Comparing with infected residents who were unvaccinated/vaccinated with one-dose, receiving at least two-dose was estimated to be effective in reducing severe outcomes in 31% and 36% of infected RCHE and RCHD residents respectively; with greater reduction in mortality among RCHD than RCHE residents (54% and 38%, respectively). Vaccine effectiveness of two-dose of BNT162b2 against severe outcomes and death are higher than that of CoronaVac.
Conclusions
Increasing COVID-19 vaccination could have significant impact on reducing the risk of COVID-19 outbreaks in RCHs. At least two-dose of COVID-19 vaccine is still effective in reducing severe outcomes and death among infected residents in RCHs during Omicron epidemic.
{"title":"COVID-19 outbreaks in residential care homes in Hong Kong and effectiveness of vaccine against severe outcomes","authors":"Mei Hung Joanna Leung, Kin Hang Kung, Ian Siu-kiu Yau, Yan Yee Fung, Kirran Nazesh Mohammad, Cheong Chi Andrew Lau, Ka Wing Albert Au, Shuk Kwan Chuang","doi":"10.1016/j.imj.2023.01.002","DOIUrl":"https://doi.org/10.1016/j.imj.2023.01.002","url":null,"abstract":"<div><h3>Background</h3><p>COVID-19 outbreaks in residential care homes for the elderly (RCHEs) and for persons with disability (RCHDs) have caused significant morbidity and mortality during 5th epidemic in Hong Kong. This article reviewed COVID-19 outbreaks situation and estimated the effectiveness of receiving at least two-dose of COVID-19 vaccine in preventing severe outcomes.</p></div><div><h3>Methods</h3><p>To estimate attack rates and vaccination coverage, documentation on COVID-19 infection and their vaccination records of residential care homes (RCH) residents reported between December 31, 2021 and May 31, 2022 were reviewed, and infected cases were follow-up for 4 weeks for severe outcomes or death. Correlation between vaccination coverage against attack rate by types of homes was examined. Infected RCH residents with available information were included in the analysis of vaccine effectiveness against severe outcomes and death.</p></div><div><h3>Results</h3><p>COVID-19 vaccination coverage was low in RCHDs (median 0.46, IQR: 0.24–0.76) and very low in RCHEs (median 0.08, IQR: 0.00–0.19). Higher attack rates were recorded among RCHE residents (median 0.84, IQR: 0.64–0.93) and higher case fatality rate (CFR: 28.1%) than in RCHDs (median 0.58, IQR: 0.31–0.84; CFR: 3.9%). The attack rate decreased when vaccination coverage increased for both RCHEs (ρ = −0.131, <em>p</em> < 0.001) and RCHDs (ρ = −0.333, <em>p</em> < 0.001). Comparing with infected residents who were unvaccinated/vaccinated with one-dose, receiving at least two-dose was estimated to be effective in reducing severe outcomes in 31% and 36% of infected RCHE and RCHD residents respectively; with greater reduction in mortality among RCHD than RCHE residents (54% and 38%, respectively). Vaccine effectiveness of two-dose of BNT162b2 against severe outcomes and death are higher than that of CoronaVac.</p></div><div><h3>Conclusions</h3><p>Increasing COVID-19 vaccination could have significant impact on reducing the risk of COVID-19 outbreaks in RCHs. At least two-dose of COVID-19 vaccine is still effective in reducing severe outcomes and death among infected residents in RCHs during Omicron epidemic.</p></div>","PeriodicalId":100667,"journal":{"name":"Infectious Medicine","volume":"2 1","pages":"Pages 1-10"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50194942","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
During the recent decades, dengue virus infection has been emerged as a major public health problem. Dengue is one of the important mosquito borne infections causing high mortality and morbidity of humans. Methods: This study was carried out from October 2018 to December 2020. A total of 354 serum samples of clinically suspected dengue patients were tested for immunoglobulin M (IgM) anti-dengue antibodies by dengue monoclonal antibody capture enzyme-linked immunosorbent assay (NIV DEN IgM Capture MAC ELISA). Seasonal variations, age and sex wise incidences were also determined.
Results
Total of 354 serum samples were processed from October 2018 to December 2020. Each year males were mostly infected with Dengue 08, 10, and 03 in 2018, 2019, and 2020, respectively. Age group 11–20 was found to be mostly infected by Dengue in case of both male and female. The prevalence of Dengue in each year was from July to November might be due to the rainy season. Clinical characteristics of patients such as fever, headache, abdominal pain and nausea/vomiting, retro-orbital pain, epistaxis, petechiae, altered sensorium, positive tourniquet test were reported.
Conclusions
Continuous dengue virus surveillance is required for monitoring of dengue virus so that early detection can be carried out. Effective vector control measures should be implemented for early detection of impending outbreak and to initiate timely control measures.
背景近几十年来,登革热病毒感染已成为一个主要的公共卫生问题。登革热是引起人类高死亡率和高发病率的重要蚊媒感染之一。方法:本研究于2018年10月至2020年12月进行。采用登革热单克隆抗体捕获酶联免疫吸附试验(NIV DEN IgM capture MAC ELISA)对354例临床疑似登革热患者的血清样本进行了免疫球蛋白M(IgM)抗登革热抗体检测。还确定了季节变化、年龄和性别的发病率。结果2018年10月至2020年12月共处理354份血清样本。每年,男性大多分别在2018年、2019年和2020年感染08、10和03型登革热。在男性和女性中,11-10岁年龄组的登革热感染率最高。登革热的流行时间为每年的7月至11月,可能是由于雨季。报告了患者的临床特征,如发烧、头痛、腹痛和恶心/呕吐、眶后疼痛、鼻出血、瘀点、感觉器改变、止血带试验阳性。结论登革热病毒监测需要持续的登革热病毒监测,以便早期发现。应采取有效的病媒控制措施,尽早发现即将爆发的疫情,并及时采取控制措施。
{"title":"Seropositivity of dengue cases at a tertiary care centre in Chhindwara, Madhya Pradesh: A three year trend","authors":"Purti C. Tripathi , Himanshu Singh , Rahul Kumar Suryawanshi , Ritesh Upadhyay","doi":"10.1016/j.imj.2023.01.003","DOIUrl":"https://doi.org/10.1016/j.imj.2023.01.003","url":null,"abstract":"<div><h3>Background</h3><p>During the recent decades, dengue virus infection has been emerged as a major public health problem. Dengue is one of the important mosquito borne infections causing high mortality and morbidity of humans. <em>Methods</em>: This study was carried out from October 2018 to December 2020. A total of 354 serum samples of clinically suspected dengue patients were tested for immunoglobulin M (IgM) anti-dengue antibodies by dengue monoclonal antibody capture enzyme-linked immunosorbent assay (NIV DEN IgM Capture MAC ELISA). Seasonal variations, age and sex wise incidences were also determined.</p></div><div><h3>Results</h3><p>Total of 354 serum samples were processed from October 2018 to December 2020. Each year males were mostly infected with Dengue 08, 10, and 03 in 2018, 2019, and 2020, respectively. Age group 11–20 was found to be mostly infected by Dengue in case of both male and female. The prevalence of Dengue in each year was from July to November might be due to the rainy season. Clinical characteristics of patients such as fever, headache, abdominal pain and nausea/vomiting, retro-orbital pain, epistaxis, petechiae, altered sensorium, positive tourniquet test were reported.</p></div><div><h3>Conclusions</h3><p>Continuous dengue virus surveillance is required for monitoring of dengue virus so that early detection can be carried out. Effective vector control measures should be implemented for early detection of impending outbreak and to initiate timely control measures.</p></div>","PeriodicalId":100667,"journal":{"name":"Infectious Medicine","volume":"2 1","pages":"Pages 44-48"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50194899","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-03-01DOI: 10.1016/j.imj.2023.01.004
Stephen A. Hoption Cann
{"title":"COVID-19 vaccine-related myocarditis: Could antipyretic drugs be a trigger?","authors":"Stephen A. Hoption Cann","doi":"10.1016/j.imj.2023.01.004","DOIUrl":"https://doi.org/10.1016/j.imj.2023.01.004","url":null,"abstract":"","PeriodicalId":100667,"journal":{"name":"Infectious Medicine","volume":"2 1","pages":"Pages 49-50"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50194902","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-03-01DOI: 10.1016/j.imj.2023.01.005
April J. Chan , Gerald Lebovic , Michael Wan , Yan Chen , Elizabeth Leung , Bradley J. Langford , Jenny Seah , Linda R. Taggart , Mark Downing
Background
Studies have demonstrated improved clinical outcomes with extended infusion (EI) piperacillin/tazobactam (TZP) compared to standard infusion (SI). However, there is less evidence on its benefits in noncritically-ill patients. Hospital-wide EI TZP was implemented at our site on February 21, 2012. Our objectives were to compare clinical, safety and economic outcomes between EI and SI TZP.
Methods
A retrospective cohort study of all adult patients who received EI TZP (3.375 g IV q8h infused over 4 hours and SI TZP for ≥ 48 hours during 3 years pre-and postimplementation was conducted. The primary study outcome was 14-day mortality while secondary outcomes included length of hospital stay (LOS), nursing plus pharmacy cost, occurrence of Clostridioides difficile infection, readmission within 30 days and change in Pseudomonas aeruginosa minimum inhibitory concentration (MIC) distribution for TZP. The primary outcome and binary secondary outcomes were analyzed using a logistic regression model. LOS was examined using time to event analysis. Cost was examined using linear regression modelling.
Results
Overall, 2034 patients received EI TZP and 1364 patients received SI TZP. EI TZP was associated with lower odds of mortality (OR 0.76, 95% CI 0.63–0.91), lower odds of C. difficile infection (OR 0.59, 95% CI 0.41–0.84) and 8% lower cost (estimate 0.92, 95% CI 0.87–0.98) compared to SI TZP.
Conclusions
Hospital-wide implementation of EI TZP was associated with lower odds of 14-day mortality and incidence of C. difficile infection with cost savings at our institution.
{"title":"Impact of extended-infusion piperacillin-tazobactam in a Canadian community hospital","authors":"April J. Chan , Gerald Lebovic , Michael Wan , Yan Chen , Elizabeth Leung , Bradley J. Langford , Jenny Seah , Linda R. Taggart , Mark Downing","doi":"10.1016/j.imj.2023.01.005","DOIUrl":"https://doi.org/10.1016/j.imj.2023.01.005","url":null,"abstract":"<div><h3>Background</h3><p>Studies have demonstrated improved clinical outcomes with extended infusion (EI) piperacillin/tazobactam (TZP) compared to standard infusion (SI). However, there is less evidence on its benefits in noncritically-ill patients. Hospital-wide EI TZP was implemented at our site on February 21, 2012. Our objectives were to compare clinical, safety and economic outcomes between EI and SI TZP.</p></div><div><h3>Methods</h3><p>A retrospective cohort study of all adult patients who received EI TZP (3.375 g IV q8h infused over 4 hours and SI TZP for ≥ 48 hours during 3 years pre-and postimplementation was conducted. The primary study outcome was 14-day mortality while secondary outcomes included length of hospital stay (LOS), nursing plus pharmacy cost, occurrence of <em>Clostridioides difficile</em> infection, readmission within 30 days and change in <em>Pseudomonas aeruginosa</em> minimum inhibitory concentration (MIC) distribution for TZP. The primary outcome and binary secondary outcomes were analyzed using a logistic regression model. LOS was examined using time to event analysis. Cost was examined using linear regression modelling.</p></div><div><h3>Results</h3><p>Overall, 2034 patients received EI TZP and 1364 patients received SI TZP. EI TZP was associated with lower odds of mortality (OR 0.76, 95% CI 0.63–0.91), lower odds of <em>C. difficile</em> infection (OR 0.59, 95% CI 0.41–0.84) and 8% lower cost (estimate 0.92, 95% CI 0.87–0.98) compared to SI TZP.</p></div><div><h3>Conclusions</h3><p>Hospital-wide implementation of EI TZP was associated with lower odds of 14-day mortality and incidence of <em>C. difficile</em> infection with cost savings at our institution.</p></div>","PeriodicalId":100667,"journal":{"name":"Infectious Medicine","volume":"2 1","pages":"Pages 31-35"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50194901","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Dengue is a major arthropod-borne viral disease spreading rapidly across the globe. The absence of vaccines and inadequate vector control measures leads to further expansion of dengue in many regions globally. Hence, the identification of genes involved in the pathogenesis of dengue will help to understand the molecular basis of the disease and the genes responsible for the disease progression.
Methods
In the present study, a meta-analysis was carried out using dengue gene expression data obtained from Gene Expression Omnibus repository. The differentially expressed genes such as CCNB1 and CCNB2 (G2/mitotic-specific cyclin-B2 and B1) were upregulated in dengue fever to control (DF-CO) and severe dengue (dengue hemorrhagic fever [DHF]) to control (DHF-CO) were identified as key genes for controlling the major pathways (cell cycle, oocyte meiosis, p53 signaling pathway, cellular senescence and progesterone-mediated oocyte maturation). Similarly, interferon alpha-inducible (IFI27) genes, type-I and type-III interferon (IFN) signaling genes (STAT1 and STAT2), B cell activation and survival genes (TNFSF13B, TNFRSF17) and toll like receptor (TLR7) genes were differentially up activated during DF-CO and DHF-CO. Followed by, Cytoscape was used to identify the immune system process and topological analysis.
Results
The results showed that the top differentially expressed genes under the statistical significance p <0.001, which is majorly involved in Kyoto Encyclopedia of Genes and Genomes orthology K05868 and K21770 with gene names CCNB1 and CCNB2. In addition to this, the immune system profile showed up-regulation of IL12A, CXCR3, TNFSF13B, IFI27, TNFRSF17, STAT, STAT2, and TLR7 genes in DF-CO and DHF-CO act as immunological signatures for inducing the immune response towards dengue infection.
Conclusions
The current study could aid in understanding of molecular pathogenesis, genes and corresponding pathway upon dengue infection, and could facilitate for identification of novel drug targets and prognostic markers.
登革热是一种主要的节肢动物传播的病毒性疾病,在全球范围内迅速传播。由于缺乏疫苗和病媒控制措施不足,登革热在全球许多地区进一步扩大。因此,识别参与登革热发病机制的基因将有助于了解该疾病的分子基础和负责疾病进展的基因。方法利用基因表达综合库中的登革热基因表达数据进行荟萃分析。差异表达基因如CCNB1和CCNB2(G2/有丝分裂特异性cyclin-B2和B1)在登革热控制(DF-CO)和严重登革热(登革出血热[DHF])控制(DHF-CO)中被鉴定为控制主要途径的关键基因(细胞周期、卵母细胞减数分裂、p53信号通路、细胞衰老和黄体酮介导的卵母细胞成熟)。类似地,干扰素-α诱导型(IFI27)基因、I型和III型干扰素(IFN)信号传导基因(STAT1和STAT2)、B细胞活化和存活基因(TNFSF13B、TNFRSF17)和toll样受体(TLR7)基因在DF-CO和DHF-CO期间被不同地上调激活。其次,利用Cytoscape对免疫系统过程进行了识别和拓扑分析。结果差异表达基因最高的基因在p<;0.001,主要涉及基因名为CCNB1和CCNB2的Kyoto Encyclopedia of Genes and Genomes orthology K05868和K21770。除此之外,免疫系统图谱显示,DF-CO和DHF-CO中的IL12A、CXCR3、TNFSF13B、IFI27、TNFRSF17、STAT、STAT2和TLR7基因作为诱导登革热感染免疫反应的免疫信号。结论本研究有助于了解登革热感染的分子发病机制、基因及其相应途径,有助于确定新的药物靶点和预后标志物。
{"title":"Analysis of gene expression profile for identification of novel gene signatures during dengue infection","authors":"Jhansi Venkata Nagamani Josyula , Prathima Talari , Agiesh Kumar Balakrishna Pillai , Srinivasa Rao Mutheneni","doi":"10.1016/j.imj.2023.02.002","DOIUrl":"https://doi.org/10.1016/j.imj.2023.02.002","url":null,"abstract":"<div><h3>Background</h3><p>Dengue is a major arthropod-borne viral disease spreading rapidly across the globe. The absence of vaccines and inadequate vector control measures leads to further expansion of dengue in many regions globally. Hence, the identification of genes involved in the pathogenesis of dengue will help to understand the molecular basis of the disease and the genes responsible for the disease progression.</p></div><div><h3>Methods</h3><p>In the present study, a meta-analysis was carried out using dengue gene expression data obtained from Gene Expression Omnibus repository. The differentially expressed genes such as CCNB1 and CCNB2 (G2/mitotic-specific cyclin-B2 and B1) were upregulated in dengue fever to control (DF-CO) and severe dengue (dengue hemorrhagic fever [DHF]) to control (DHF-CO) were identified as key genes for controlling the major pathways (cell cycle, oocyte meiosis, p53 signaling pathway, cellular senescence and progesterone-mediated oocyte maturation). Similarly, interferon alpha-inducible (IFI27) genes, type-I and type-III interferon (IFN) signaling genes (STAT1 and STAT2), B cell activation and survival genes (TNFSF13B, TNFRSF17) and toll like receptor (TLR7) genes were differentially up activated during DF-CO and DHF-CO. Followed by, Cytoscape was used to identify the immune system process and topological analysis.</p></div><div><h3>Results</h3><p>The results showed that the top differentially expressed genes under the statistical significance <em>p</em> <0.001, which is majorly involved in Kyoto Encyclopedia of Genes and Genomes orthology K05868 and K21770 with gene names CCNB1 and CCNB2. In addition to this, the immune system profile showed up-regulation of IL12A, CXCR3, TNFSF13B, IFI27, TNFRSF17, STAT, STAT2, and TLR7 genes in DF-CO and DHF-CO act as immunological signatures for inducing the immune response towards dengue infection.</p></div><div><h3>Conclusions</h3><p>The current study could aid in understanding of molecular pathogenesis, genes and corresponding pathway upon dengue infection, and could facilitate for identification of novel drug targets and prognostic markers.</p></div>","PeriodicalId":100667,"journal":{"name":"Infectious Medicine","volume":"2 1","pages":"Pages 19-30"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50194944","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-03-01DOI: 10.1016/j.imj.2023.02.003
Chen Stein-Zamir , Ora Sinai-Zaken , Eti Zvulun , Ghada Najajra , Rinat Pinto , Shahar Koren , Hanna Shoob , Nitza Abramson
Background
SARS-CoV-2 clinical presentation is associated with the patients’ age group. Overall, young individuals present higher proportions of asymptomatic or mild COVID-19 infection, compared to adults. Data on secondary COVID-19 transmission in households, according to the cases’ age group, are accumulating.
Methods
We performed a follow-up cohort study including all COVID-19 real-time polymerase chain reaction (RT-PCR)-confirmed cases (adolescent students and school staff) diagnosed in an epidemiological investigation of a large high school outbreak. We compared the adolescent and adult groups regarding clinical symptoms, time to negative COVID-19 RT-PCR tests, and infection transmission in households.
Results
The study population included 817 persons. The confirmed COVID-19 RT-PCR outbreak cases (n = 178) were followed (students aged 12–19 years, median age 14 years, n = 153, school staff aged 24–67 years, median age 39 years, n = 25) and the cases’ household close contacts (n = 639) were tested. The adolescents had lower symptomatic infection rates, shorter time to negative COVID-19 RT-PCR tests, and lower transmission rates to household members, compared to the adults. The general transmission rate among household contacts was 13.5%, (86/639) ranging from 8.6% in asymptomatic students’ contacts to 27.3% in symptomatic staff contacts. COVID-19 transmission rates were significantly higher in contacts of symptomatic cases compared to asymptomatic cases (odds ratio: 2.06, 95% CI 1.26–3.4) and higher in adults compared to adolescents (odds ratio: 2.69, 95% CI 1.43–4.89).
Conclusions
Adolescents and adults diagnosed in an outbreak investigation differ as to COVID-19 clinical presentation and transmission. As adolescents may show mild or no symptoms, COVID-19 prevention in school settings is challenging. Implementing nonpharmaceutical measures and promoting vaccination programs in eligible staff and students should be considered.
{"title":"SARS-CoV-2 infection characteristics among students and staff in a large high school COVID-19 outbreak and secondary transmission in households","authors":"Chen Stein-Zamir , Ora Sinai-Zaken , Eti Zvulun , Ghada Najajra , Rinat Pinto , Shahar Koren , Hanna Shoob , Nitza Abramson","doi":"10.1016/j.imj.2023.02.003","DOIUrl":"https://doi.org/10.1016/j.imj.2023.02.003","url":null,"abstract":"<div><h3>Background</h3><p>SARS-CoV-2 clinical presentation is associated with the patients’ age group. Overall, young individuals present higher proportions of asymptomatic or mild COVID-19 infection, compared to adults. Data on secondary COVID-19 transmission in households, according to the cases’ age group, are accumulating.</p></div><div><h3>Methods</h3><p>We performed a follow-up cohort study including all COVID-19 real-time polymerase chain reaction (RT-PCR)-confirmed cases (adolescent students and school staff) diagnosed in an epidemiological investigation of a large high school outbreak. We compared the adolescent and adult groups regarding clinical symptoms, time to negative COVID-19 RT-PCR tests, and infection transmission in households.</p></div><div><h3>Results</h3><p>The study population included 817 persons. The confirmed COVID-19 RT-PCR outbreak cases (<em>n</em> = 178) were followed (students aged 12–19 years, median age 14 years, <em>n</em> = 153, school staff aged 24–67 years, median age 39 years, <em>n</em> = 25) and the cases’ household close contacts (<em>n</em> = 639) were tested. The adolescents had lower symptomatic infection rates, shorter time to negative COVID-19 RT-PCR tests, and lower transmission rates to household members, compared to the adults. The general transmission rate among household contacts was 13.5%, (86/639) ranging from 8.6% in asymptomatic students’ contacts to 27.3% in symptomatic staff contacts. COVID-19 transmission rates were significantly higher in contacts of symptomatic cases compared to asymptomatic cases (odds ratio: 2.06, 95% CI 1.26–3.4) and higher in adults compared to adolescents (odds ratio: 2.69, 95% CI 1.43–4.89).</p></div><div><h3>Conclusions</h3><p>Adolescents and adults diagnosed in an outbreak investigation differ as to COVID-19 clinical presentation and transmission. As adolescents may show mild or no symptoms, COVID-19 prevention in school settings is challenging. Implementing nonpharmaceutical measures and promoting vaccination programs in eligible staff and students should be considered.</p></div>","PeriodicalId":100667,"journal":{"name":"Infectious Medicine","volume":"2 1","pages":"Pages 36-43"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50194945","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-03-01DOI: 10.1016/j.imj.2023.02.001
Buddhini Samaraweera , Malsha G. Thrimavithana , Lakmini Gunathilake , Prabath Gankanda , Janitha Nanayakkara , Janaki I. Abeynayake
Background
Measles is a highly contagious illness. Sri Lanka (SL) has eliminated the measles in 2019. The country is at risk of importation of measles and there could be vaccine-associated measles like illnesses. Therefore, it is important to investigate patients with fever, rash to differentiate the wild-type from vaccine-type excluding other suspected pathogens to direct infection prevention and control strategies. The objective is to describe the laboratory investigation procedure in an immunocompetent child, developed fever, rash following measles containing vaccine in post-measles eliminated period, SL.
Methods
This laboratory based investigation was carried out in National Measles Laboratory, SL. Blood and throat swab were received from a patient with fever, rash, cough and coryza developed at tenth day of receiving the measles containing live-attenuated vaccine. Samples were tested for measles, rubella, and other relevant pathogens according to the laboratory testing algorithm for an immunocompetent child with fever, rash and flu like symptoms.
Results
Measles vaccine type A, Edmonston-strain virus was detected after sequencing in throat swab and measles IgM and IgG were positive at sixth-week of illness-onset. In addition, influenza A RNA was detected in throat swab at day-three with detectable parvoB19 IgM in blood sample received at sixth-week of post-onset symptoms.
Conclusions
Measles like illness of this immunocompetent child who received measles containing vaccine could be due to measles vaccine-type A or influenza infection. In a measles eliminated, resource-limited setting in SL, there should be a well-defined, testing algorithm to exclude prevalent possible pathogens according to epidemiological and clinical information.
{"title":"Laboratory response to an infant with suspected measles vaccine associated fever and rash in Sri Lanka","authors":"Buddhini Samaraweera , Malsha G. Thrimavithana , Lakmini Gunathilake , Prabath Gankanda , Janitha Nanayakkara , Janaki I. Abeynayake","doi":"10.1016/j.imj.2023.02.001","DOIUrl":"https://doi.org/10.1016/j.imj.2023.02.001","url":null,"abstract":"<div><h3>Background</h3><p>Measles is a highly contagious illness. Sri Lanka (SL) has eliminated the measles in 2019. The country is at risk of importation of measles and there could be vaccine-associated measles like illnesses. Therefore, it is important to investigate patients with fever, rash to differentiate the wild-type from vaccine-type excluding other suspected pathogens to direct infection prevention and control strategies. The objective is to describe the laboratory investigation procedure in an immunocompetent child, developed fever, rash following measles containing vaccine in post-measles eliminated period, SL.</p></div><div><h3>Methods</h3><p>This laboratory based investigation was carried out in National Measles Laboratory, SL. Blood and throat swab were received from a patient with fever, rash, cough and coryza developed at tenth day of receiving the measles containing live-attenuated vaccine. Samples were tested for measles, rubella, and other relevant pathogens according to the laboratory testing algorithm for an immunocompetent child with fever, rash and flu like symptoms.</p></div><div><h3>Results</h3><p>Measles vaccine type A, Edmonston-strain virus was detected after sequencing in throat swab and measles IgM and IgG were positive at sixth-week of illness-onset. In addition, influenza A RNA was detected in throat swab at day-three with detectable parvoB19 IgM in blood sample received at sixth-week of post-onset symptoms.</p></div><div><h3>Conclusions</h3><p>Measles like illness of this immunocompetent child who received measles containing vaccine could be due to measles vaccine-type A or influenza infection. In a measles eliminated, resource-limited setting in SL, there should be a well-defined, testing algorithm to exclude prevalent possible pathogens according to epidemiological and clinical information.</p></div>","PeriodicalId":100667,"journal":{"name":"Infectious Medicine","volume":"2 1","pages":"Pages 57-62"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50194903","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-03-01DOI: 10.1016/j.imj.2022.12.001
Ci Zhang , Chao Zhou , Wanqing Xu , Shimin Zheng , Yanxiao Gao , Peiqi Li , Luojia Deng , Xuezhixing Zhang , Qianxue Jiang , Frank Qian , Xianhong Li , Honghong Wang , Huachun Zou , Yinglin Xia , Tao Wang , Hui Lu , Han-Zhu Qian
Background
Global evidence on the transmission of asymptomatic SARS-CoV-2 infection needs to be synthesized.
Methods
A search of 4 electronic databases (PubMed, EMBASE, Cochrane Library, and Web of Science databases) as of January 24, 2021 was performed. Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines were followed. Studies which reported the transmission rate among close contacts with asymptomatic SARS-CoV-2 cases were included, and transmission activities occurred were considered. The transmission rates were pooled by zero-inflated beta distribution. The risk ratios (RRs) were calculated using random-effects models.
Results
Of 4923 records retrieved and reviewed, 15 studies including 3917 close contacts with asymptomatic indexes were eligible. The pooled transmission rates were 1.79 per 100 person-days (or 1.79%, 95% confidence interval [CI] 0.41%–3.16%) by asymptomatic index, which is significantly lower than by presymptomatic (5.02%, 95% CI 2.37%–7.66%; p<0.001), and by symptomatic (5.27%, 95% CI 2.40%–8.15%; p<0.001). Subgroup analyses showed that the household transmission rate of asymptomatic index was (4.22%, 95% CI 0.91%–7.52%), four times significantly higher than non-household transmission (1.03%, 95% CI 0.73%–1.33%; p=0.03), and the asymptomatic transmission rate in China (1.82%, 95% CI 0.11%–3.53%) was lower than in other countries (2.22%, 95% CI 0.67%–3.77%; p=0.01).
Conclusions
People with asymptomatic SARS-CoV-2 infection are at risk of transmitting the virus to their close contacts, particularly in household settings. The transmission potential of asymptomatic infection is lower than symptomatic and presymptomatic infections. This meta-analysis provides evidence for predicting the epidemic trend and promulgating vaccination and other control measures. Registered with PROSPERO International Prospective Register of Systematic Reviews, CRD42021269446; https://www.crd.york.ac.uk/prospero/display_record.php?RecordID=269446.
背景需要综合全球关于无症状严重急性呼吸系统综合征冠状病毒2型感染传播的证据。方法检索截至2021年1月24日的4个电子数据库(PubMed、EMBASE、Cochrane Library和Web of Science数据库)。遵循系统评价和荟萃分析(PRISMA)指南的首选报告项目。包括报告无症状严重急性呼吸系统综合征冠状病毒2型病例密切接触者传播率的研究,并考虑了发生的传播活动。传播率由零膨胀的β分布汇总。使用随机效应模型计算风险比(RR)。结果在检索和审查的4923份记录中,15项研究符合条件,包括3917名无症状指数的密切接触者。按无症状指数计算,合并传播率为1.79/100人日(或1.79%,95%置信区间[CI]0.41%~3.16%),显著低于症状前(5.02%,95%可信区间2.37%-7.66%;p<;0.001),亚组分析显示,无症状指数的家庭传播率为(4.22%,95%CI 0.91%-7.52%),是非家庭传播的四倍(1.03%,95%CI 0.73%-133%;p=0.03),中国的无症状传播率(1.82%,95%CI0.11%-3.53%)低于其他国家(2.22%,95%CI0.67%-37.77%;p=0.01)。结论无症状严重急性呼吸系统综合征冠状病毒2型感染者有将病毒传播给其密切接触者的风险,尤其是在家庭环境中。无症状感染的传播潜力低于有症状和症状前感染。该荟萃分析为预测疫情趋势、公布疫苗接种和其他控制措施提供了证据。在PROSPERO国际系统评价前瞻性注册处注册,CRD42021269446;https://www.crd.york.ac.uk/prospero/display_record.php?RecordID=269446.
{"title":"Transmission risk of asymptomatic SARS-CoV-2 infection: a systematic review and meta-analysis","authors":"Ci Zhang , Chao Zhou , Wanqing Xu , Shimin Zheng , Yanxiao Gao , Peiqi Li , Luojia Deng , Xuezhixing Zhang , Qianxue Jiang , Frank Qian , Xianhong Li , Honghong Wang , Huachun Zou , Yinglin Xia , Tao Wang , Hui Lu , Han-Zhu Qian","doi":"10.1016/j.imj.2022.12.001","DOIUrl":"https://doi.org/10.1016/j.imj.2022.12.001","url":null,"abstract":"<div><h3>Background</h3><p>Global evidence on the transmission of asymptomatic SARS-CoV-2 infection needs to be synthesized.</p></div><div><h3>Methods</h3><p>A search of 4 electronic databases (PubMed, EMBASE, Cochrane Library, and Web of Science databases) as of January 24, 2021 was performed. Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines were followed. Studies which reported the transmission rate among close contacts with asymptomatic SARS-CoV-2 cases were included, and transmission activities occurred were considered. The transmission rates were pooled by zero-inflated beta distribution. The risk ratios (RRs) were calculated using random-effects models.</p></div><div><h3>Results</h3><p>Of 4923 records retrieved and reviewed, 15 studies including 3917 close contacts with asymptomatic indexes were eligible. The pooled transmission rates were 1.79 per 100 person-days (or 1.79%, 95% confidence interval [CI] 0.41%–3.16%) by asymptomatic index, which is significantly lower than by presymptomatic (5.02%, 95% CI 2.37%–7.66%; <em>p</em><0.001), and by symptomatic (5.27%, 95% CI 2.40%–8.15%; <em>p</em><0.001). Subgroup analyses showed that the household transmission rate of asymptomatic index was (4.22%, 95% CI 0.91%–7.52%), four times significantly higher than non-household transmission (1.03%, 95% CI 0.73%–1.33%; <em>p</em>=0.03), and the asymptomatic transmission rate in China (1.82%, 95% CI 0.11%–3.53%) was lower than in other countries (2.22%, 95% CI 0.67%–3.77%; <em>p</em>=0.01).</p></div><div><h3>Conclusions</h3><p>People with asymptomatic SARS-CoV-2 infection are at risk of transmitting the virus to their close contacts, particularly in household settings. The transmission potential of asymptomatic infection is lower than symptomatic and presymptomatic infections. This meta-analysis provides evidence for predicting the epidemic trend and promulgating vaccination and other control measures. Registered with PROSPERO International Prospective Register of Systematic Reviews, CRD42021269446; <span>https://www.crd.york.ac.uk/prospero/display_record.php?RecordID=269446</span><svg><path></path></svg>.</p></div>","PeriodicalId":100667,"journal":{"name":"Infectious Medicine","volume":"2 1","pages":"Pages 11-18"},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50194943","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}