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Organ cross-talk and the aetiology of obesity – an impasse 器官串音和肥胖的病因学——一个僵局
Pub Date : 2022-03-01 DOI: 10.1016/S2707-3688(23)00060-2
John R. Speakman
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引用次数: 0
Peptide drugs application in metabolic diseases and discovery strategies 多肽药物在代谢性疾病中的应用及发现策略
Pub Date : 2022-03-01 DOI: 10.1016/S2707-3688(23)00063-8
Bin TENG , Junfeng LI , Peigen REN

Peptides (or polypeptides) are generally defined as those molecules compounded with less than 100 amino acids linked by peptide bonds, and the relative molecular weight is less than 10 000 Da usually. To date, more than 7 000 naturally peptides have been identified, and they play critical roles in mammalian pathophysiology. Peptide drugs are a unique kind of pharmaceutical compounds due to their different biochemical and therapeutic characteristics. This review will briefly introduce the application of peptide drugs in the treatment of common metabolic diseases and available discovery strategies for potential peptide drugs.

肽(或多肽)一般定义为由肽键连接的少于100个氨基酸组成的分子,相对分子量通常小于10,000 Da。迄今为止,已经鉴定了7000多种天然肽,它们在哺乳动物病理生理中起着关键作用。肽类药物因其不同的生化和治疗特性而成为一类独特的药物化合物。本文将简要介绍肽类药物在常见代谢性疾病治疗中的应用以及潜在肽类药物的现有发现策略。
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引用次数: 0
De novo transcriptome sequencing and analysis of genes related to flavonoid metabolism in Abrus cantoniensis Hance 广东草类黄酮代谢相关基因的从头转录组测序和分析
Pub Date : 2021-12-01 DOI: 10.1016/S2707-3688(23)00073-0
Weibin HUANG , Yu QIU , Zhixia CHEN , Cuimin HE , Xianmei XUE , Xujiang YUAN

Background and objective

Flavonoids are important botanical metabolites, which not only protect plants from harm but also exhibit a variety of biological activities. The aim of this study was to examine the transcriptomic profiles of Abrus cantoniensis (AC) and determine the differentially expressed genes (DEGs) of flavonoids in the roots (AC-R), stems (AC-S), mature leaves (AC-ML), and tender leaves (AC-TL) of this medicinal plant.

Methods

Illumina sequencing technology was applied to sequence the transcriptome of AC. Bioinformatics tools were used to perform the de novo assembly, genes annotation, cluster analysis.

Results

More than 99.70% clean reads with 57 325 assembled unigenes were obtained. A total of 36 947 unigenes (64.45%) were successfully annotated in the Nr, SwissProt, KOG, and KEGG databases; 8 269 unigenes were assigned to 132 pathways in the KEGG database. Differential gene analysis revealed meaningful differences in the number of up- and down-regulated genes among the different parts of AC, except between AC-R and AC-S. Cluster analysis of the expression patterns of the DEGs revealed different expression trends for 20 profiles among which 9 were remarkably enriched. The most obvious difference in gene expression among AC-R, AC-S, AC-ML, and AC-TL with respect to the biosynthesis of phenylpropanoids was detected upstream in the flavonoid metabolic pathway.

Conclusion

This is the first study to provide information about the transcriptome profiles of AC and the DEGs of the flavonoid pathway in this plant.

背景与目的黄酮类化合物是重要的植物代谢产物,不仅具有保护植物免受伤害的作用,而且具有多种生物活性。本研究旨在研究广东草(Abrus cantoniensis, AC)的转录组学特征,并确定其根(AC- r)、茎(AC- s)、成熟叶(AC- ml)和嫩叶(AC- tl)中黄酮类化合物的差异表达基因(DEGs)。方法应用illumina测序技术对AC转录组进行测序,利用生物信息学工具进行从头组装、基因注释、聚类分析。结果共获得57 325个组装单基因的99.70%以上的clean reads。在Nr、SwissProt、KOG和KEGG数据库中成功标注了36947个unigenes (64.45%);在KEGG数据库中,共有8269个unigenes被分配到132个通路上。差异基因分析显示,AC- r和AC- s之间,AC- r和AC- s之间的上调和下调基因数量存在显著差异。聚类分析结果显示,20个基因型的表达趋势不同,其中9个基因型显著富集。AC-R、AC-S、AC-ML和AC-TL在苯丙素生物合成方面的基因表达差异最明显的是在类黄酮代谢途径上游。结论本研究首次提供了黄酮类通路中AC和DEGs的转录组谱信息。
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引用次数: 0
High expression of MRPL52 can be used as a prognostic marker of hepatocellular carcinoma and is related to immune infiltration MRPL52的高表达可作为肝细胞癌的预后标志物,并与免疫浸润有关
Pub Date : 2021-12-01 DOI: 10.1016/S2707-3688(23)00075-4
Nan HUANG, Xiang LIU, Qichang XING, Jia CHEN, Xiaolan GUO, Wei LI, Zheng LIU

Objective

To analyze the differential expression and prognostic value of Mitochondrial ribosomal protein L52 (MRPL52) in hepatocellular carcinoma using bioinformatics, and to explore the prognostic value and role of the MRPL52 in the immune regulation of hepatocellular carcinoma.

Methods

Hepatocellular Carcinoma Database (HCCDB) and Tumor Immune Estimation Resource (TIMER) databases were used in analyzing the differential expression of MRPL52 in hepatocellular carcinoma tissue and normal paracancerous tissues; UALCAN database was used to analyze the correlation between levels of MRPL52 expression and levels of DNA methylation vs. clinical phenotypes, including tumor grade, tumor stage, and metastasis, Kaplan–Meier plotter database was used in analyzing the relationship between MRPL52 expression and hepatocellular carcinoma survival; LinkedOmics database was used in analyzing MRPL52 co-expression genes, target miRNAs and transcription factors; GENEMANIA database was used to construct the protein interaction network; DiseaseMeth database and MEXPRESS database were used to analyze the level of MRPL52 DNA methylation and changes in methylation sites, and TIMER database was used in analyzing the relationship between MRPL52 and immune infiltration of hepatocellular carcinoma.

Results

MRPL52 was highly expressed in hepatocellular carcinoma and was positively correlated with clinical phenotypes, including tumor grade, tumor stage, and distant metastasis; high expression of MRPL52 was associated with poor prognosis of hepatocellular carcinoma; co-expression analysis showed that MRPL52 co-expression genes were enriched in multiple cancer-related signal pathways, and methylation analysis showed that the DNA methylation level of MRPL52 reduced significantly in hepatocellular carcinoma. Additionally, significant changes were found in methylation sites cg07436208 and cg04556361, which were negatively correlated with the expression level of MRPL52, and K–M survival analysis showed that the cg04556361 methylation site was negatively correlated with the overall survival of hepatocellular carcinoma; MRPL52 was associated with immune cell infiltration of hepatocellular carcinoma, and Cox multivariate regression analysis showed that MRPL52 could increase the risk of overall survival (OS) by 1.435-fold in the absence of immune cells.

Conclusion

The expression level of MRPL52 in patients with hepatocellular carcinoma is increased, which is related closely to poor prognosis, suggesting that MRPL52 is expected to become a prognostic marker and a new target for the treatment of hepatocellular carcinoma.

目的应用生物信息学方法分析线粒体核糖体蛋白L52 (MRPL52)在肝细胞癌中的差异表达及预后价值,探讨MRPL52在肝细胞癌免疫调节中的预后价值及作用。方法应用肝细胞癌数据库(HCCDB)和肿瘤免疫估计资源(TIMER)数据库分析MRPL52在肝细胞癌组织和正常癌旁组织中的表达差异;采用UALCAN数据库分析MRPL52表达水平和DNA甲基化水平与临床表型(包括肿瘤分级、肿瘤分期、转移)的相关性,采用Kaplan-Meier绘图图数据库分析MRPL52表达与肝癌存活的关系;利用LinkedOmics数据库分析MRPL52共表达基因、靶mirna和转录因子;利用GENEMANIA数据库构建蛋白相互作用网络;采用disease - emeth数据库和MEXPRESS数据库分析MRPL52 DNA甲基化水平及甲基化位点变化,采用TIMER数据库分析MRPL52与肝癌免疫浸润的关系。结果smrpl52在肝细胞癌中高表达,并与临床表型(肿瘤分级、肿瘤分期、远处转移)呈正相关;MRPL52高表达与肝癌预后不良相关;共表达分析显示,MRPL52共表达基因在多种癌症相关信号通路中富集,甲基化分析显示,MRPL52的DNA甲基化水平在肝细胞癌中显著降低。此外,甲基化位点cg07436208和cg04556361发生显著变化,与MRPL52的表达水平呈负相关,K-M生存分析显示cg04556361甲基化位点与肝细胞癌的总生存呈负相关;MRPL52与肝细胞癌免疫细胞浸润相关,Cox多因素回归分析显示,MRPL52在无免疫细胞情况下可使总生存(OS)风险增加1.435倍。结论MRPL52在肝细胞癌患者中的表达水平升高,与预后不良密切相关,提示MRPL52有望成为肝细胞癌的预后标志物和治疗的新靶点。
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引用次数: 0
Cancer-induced bone pain: spinal cord mechanisms and traditional Chinese medicine treatment 癌性骨痛:脊髓机制与中医治疗
Pub Date : 2021-12-01 DOI: 10.1016/S2707-3688(23)00071-7
Wei YANG , Yachen YANG , Yanqing WANG

Abstract

Cancer-induced bone pain (CIBP) is a severe, intolerable, and complex pain condition caused by the primary bone tumor or bone metastasis. CIBP is a combination of complex pain states such as persistent dull pain, spontaneous pain, and mechanical allodynia. Its unique breakthrough pain makes patients suffer because of its unstable onset time and extremely strong pain. The mechanisms of CIBP involves inflammatory, neuropathic factors and specific peripheral local tumor destruction. Approximately 75% of patients with advanced cancer have experienced CIBP. With the survival time of patients with cancer being prolonged, only half of the CIBP can be well controlled. To develop more effective drugs and improve the quality of life of patients with CIBP, it is particularly urgent to extensively study the complex mechanisms of the occurrence and development of CIBP as well as to uncover new targets for developing new analgesics. The spinal cord is the primary center of nociceptive signal processing. During CIBP, unique neurobiochemical changes occur in the spinal cord level. Therefore, the study on the spinal cord level mechanisms of CIBP facilitates the development of efficient and accurate treatment of CIBP. During the development of CIBP, the central sensitization caused by the enhanced information transmission of “neuron glial cells” in the spinal cord is closely related to the central nervous inflammation (mainly activated by glial cells such as astrocytes and microglia). CIBP belongs to the category of “arthralgia” or other diseases in traditional Chinese medicine (TCM). The pathogenesis is mostly the empirical evidence of “impassability leads to pain” and the deficiency syndrome of “dishonor leads to pain”, which is often mixed with deficiency and reality. Treatment should be based on the basic principles of “supporting righteousness and eliminating evil” and “treating both the symptoms and the root cause”. TCM has a good analgesic effect in the treatment of CIBP, of based on syndrome differentiation and treatment tonic agents, rational blood agents, Qi-regulating agents, are mostly used in the selected of prescriptions, with effects as dispelling wind dampness, promoting blood circulation, and removing blood stasis, tonifying deficiency drugs and so on. With the development of integrated traditional Chinese and Western medicine research, the specific mechanisms of TCM to alleviate CIBP is gradually clear. This review summarizes the basic research on the spinal cord mechanism of CIBP and internal treatment of CIBP with TCM in recent 10 years.

摘要癌性骨痛(CIBP)是由原发性骨肿瘤或骨转移引起的严重、难以忍受的复杂疼痛。CIBP是复杂疼痛状态的组合,如持续性钝痛、自发性疼痛和机械异常性疼痛。其独特的突破性疼痛,因其发作时间不稳定,疼痛感极强,使患者痛苦不堪。CIBP的机制涉及炎症、神经病变因素和特定的周围局部肿瘤破坏。大约75%的晚期癌症患者经历过CIBP。随着癌症患者生存时间的延长,只有一半的CIBP能得到很好的控制。为了开发更有效的药物,提高CIBP患者的生活质量,广泛研究CIBP发生发展的复杂机制,发现开发新型镇痛药的新靶点尤为迫切。脊髓是伤害性信号处理的主要中枢。在CIBP期间,独特的神经生化变化发生在脊髓水平。因此,研究CIBP的脊髓水平机制有助于开发高效准确的CIBP治疗方法。在CIBP的发展过程中,脊髓“神经元胶质细胞”信息传递增强引起的中枢致敏与中枢神经炎症(主要由星形胶质细胞、小胶质细胞等胶质细胞激活)密切相关。CIBP属于中医“关节痛”或其他疾病的范畴。病机多以“不通致痛”的经验证和“耻致痛”的虚证为证,常虚实相混。治疗应遵循“扶正除邪”、“标本兼治”的基本原则。中医在治疗CIBP中具有良好的镇痛效果,在方药的选择上多采用以辨证论治为主的补益剂、理血剂、调气剂等,具有祛风湿、活血化瘀、补虚药等功效。随着中西医结合研究的深入,中药缓解CIBP的具体机制逐渐清晰。本文就近10年来CIBP脊髓机制及中医内治CIBP的基础研究进行综述。
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引用次数: 0
Advances in chemical constituents and pharmacological effects of Millettia speciosa Champ. 香菇化学成分及药理作用研究进展。
Pub Date : 2021-12-01 DOI: 10.1016/S2707-3688(23)00072-9
Jingmei CHEN, Xiaofa LYU, Denghui ZHAI, Jinyan CAI

Millettia speciosa Champ. is a famous medicinal and edible herb in southeast China. The major constituents of M. speciosa includes flavonoids, alkaloids and so on, which display effects of protecting liver and resisting fatigue. With access to relevant literature, the result shows that the chemical constituents of root and aerial parts in M. speciosa have been studied clearly, while the pharmacological research of M. speciosa is still very preliminary, and there is little application of active constituents for deep pharmacological research and development. Therefore, this paper summarizes the research on the chemical constituents and pharmacological effects of M. speciosa in recent years in order to provide reference for the further development and utilization of M. speciosa active constituents.

香槟酒。是中国东南部著名的药用和食用草本植物。黄芪的主要成分有黄酮类、生物碱等,具有保护肝脏、抗疲劳的作用。通过查阅相关文献,研究结果表明,对金针桃根部和地上部的化学成分已经有了明确的研究,而金针桃的药理研究还处于初级阶段,有效成分的深入药理研究开发应用较少。因此,本文对近年来棘豆的化学成分及药理作用的研究进行综述,以期为棘豆有效成分的进一步开发利用提供参考。
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引用次数: 0
Qingda granules mitigate cardiac inflammation in spontaneously hypertensive rats via the MCP-1/CCR2 signaling pathway 清大颗粒通过MCP-1/CCR2信号通路减轻自发性高血压大鼠心脏炎症
Pub Date : 2021-12-01 DOI: 10.1016/S2707-3688(23)00069-9
Jianfeng CHU , Huai WANG , Tianyi WANG , Meizhong PENG , Xueling ZHOU , Yan LU , Shan LIN , Aling SHEN , Changgeng FU , Jun PENG

Objective

This study investigated effects and underlying mechanisms of Qingda granules (QDG) on cardiac inflammation in spontaneously hypertensive rats (SHRs).

Methods

Twelve SHRs (17 weeks old) were randomly divided into SHR and SHR + QDG groups, with six rats in each group. We also used six 17-week-old Wistar Kyoto (WKY) rats as the WKY group. While rats in the SHR + QDG group were administered QDG (0.8 g/kg/d) for eight weeks, those in the WKY and SHR groups were administered an equal volume of normal saline. Blood pressure was then monitored weekly. Subsequently, hematoxylin and eosin (HE) staining was used to detect pathological changes in the cardiac tissue. Besides, enzyme-linked immunosorbent assay (ELISA) was used to detect the serum content of inflammatory cytokines. Subsequently, real-time quantitative polymerase chain reaction and immunohistochemical (IHC) staining were conducted to determine the expression of inflammatory cytokines and inflammatory cell infiltration, including the activation of the MCP-1/CCR2 signaling pathway.

Results

As observed, QDG inhibited the elevation of systolic blood pressure, diastolic blood pressure, and mean arterial pressure in the understudied SHRs. HE staining showed that this drug attenuated pathological changes and inflammatory cell infiltration of cardiac tissue samples in the SHRs. However, ELISA and IHC confirmed a reduction in the expression of tumor necrosis factor-α (TNF-α) and interleukin-6 (IL-6) in the serum and cardiac tissue of SHRs with QDG treatment. Additionally, QDG treatment significantly attenuated protein levels of interferon-γ, CD3, and Mac-2 in the cardiac tissue samples of SHRs. Moreover, mRNA and protein expressions of monocyte chemoattractant protein 1 (MCP-1) and chemotactic cytokine receptor 2 (CCR2), which were upregulated in cardiac tissue samples of SHRs, became downregulated through treatment with QDG.

Conclusion

Therefore, by decreasing the levels of inflammatory cytokines and inflammatory cell infiltration through suppression of the MCP-1/CCR2 signaling pathway, QDG treatment attenuated blood pressure and cardiac inflammatory changes in SHRs.

目的探讨清大颗粒对自发性高血压大鼠心脏炎症的影响及其机制。方法12只17周龄的SHR大鼠随机分为SHR组和SHR + QDG组,每组6只。选取6只17周龄Wistar Kyoto (WKY)大鼠作为WKY组。SHR + QDG组大鼠连续8周给予QDG (0.8 g/kg/d), WKY和SHR组大鼠给予等量生理盐水。然后每周监测血压。随后,采用苏木精和伊红(HE)染色检测心脏组织的病理变化。此外,采用酶联免疫吸附试验(ELISA)检测血清中炎症因子的含量。随后,通过实时定量聚合酶链反应和免疫组化(IHC)染色检测炎症细胞因子的表达和炎症细胞浸润情况,包括MCP-1/CCR2信号通路的激活情况。结果观察到,QDG抑制未充分研究的SHRs的收缩压、舒张压和平均动脉压升高。HE染色显示该药能减轻SHRs心脏组织样本的病理改变和炎症细胞浸润。然而,ELISA和免疫组化证实,QDG治疗SHRs血清和心脏组织中肿瘤坏死因子-α (TNF-α)和白细胞介素-6 (IL-6)的表达降低。此外,QDG治疗显著降低了SHRs心脏组织样本中干扰素-γ、CD3和Mac-2的蛋白水平。此外,在SHRs心脏组织样本中上调的单核细胞趋化蛋白1 (MCP-1)和趋化细胞因子受体2 (CCR2)的mRNA和蛋白表达在QDG处理后下调。结论QDG通过抑制MCP-1/CCR2信号通路降低炎症细胞因子水平和炎症细胞浸润,降低了SHRs的血压和心脏炎症变化。
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引用次数: 0
The roles of natural compounds in somatic reprogramming 天然化合物在体细胞重编程中的作用
Pub Date : 2021-12-01 DOI: 10.1016/S2707-3688(23)00074-2
Zili LEI , Yanmei HAO , Yanhong YANG

Somatic reprogramming is a big breakthrough in stem cell technology. A deep understanding of the mechanisms of reprogramming will promote manipulating the cell fates and is expected to treat various diseases caused by the degeneration of functional cells, tissues, and organs. However, the existing reprogramming problems include low efficiency and unsafe, and many small molecules have been found to improve this state. Here in this review, the important roles of natural compounds in reprogramming are summarized, providing new insights into the cell fate transformation.

体细胞重编程是干细胞技术的一大突破。对重编程机制的深入了解将促进对细胞命运的操纵,并有望治疗由功能性细胞、组织和器官退化引起的各种疾病。然而,现有的重编程存在效率低、不安全等问题,许多小分子被发现可以改善这种状态。本文综述了天然化合物在细胞重编程中的重要作用,为研究细胞命运转化提供了新的思路。
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引用次数: 0
Synthesis of copper (II) porphyrin complexes and their interaction with c-myc G-quadruplex DNA 铜(II)卟啉配合物的合成及其与c-myc g -四重体DNA的相互作用
Pub Date : 2021-12-01 DOI: 10.1016/S2707-3688(23)00070-5
Kunxian YANG , Jiashu CHEN , Bingbing ZHAI , Weiming CHEN , Huanglan YANG , Yufen XIAO , Juping WANG , Wenjie MEI

Objective

To synthesize copper (II) porphyrin complexes and study their interactions with c-myc G-quadruplex DNA.

Methods

The 5-p-hydroxyphenyl-10, 15, 20-tris (p-methoxyphenyl) copper (II) porphyrin complex [p-HTMOPPCu (II)] was synthesized by the conventional heating method. Ultraviolet (UV) titration, fluorescence titration, fluorescence resonance energy transfer (FRET) melting point and competitive assays were used to study the interactions between p-HTMOPPCu (II) and c-myc G-quadruplex DNA.

Results

The UV absorption spectrum and fluorescence spectroscopy results indicated that the complex of p-HTMOPPCu (II) bound better with c-myc G-quadruplex DNA; the FRET melting point assay, and competitive melting point assay demonstrated that p-HTMOPPCu (II) could selectively bind and stabilize c-myc G-quadruplex DNA.

Conclusion

p-HTMOPPCu (II) can bind and stabilize c-myc G-quadruplex DNA and will potentially be developed into a class of small molecule inhibitors targeting c-myc G-quadruplex DNA for clinical applications in the treatment of tumors.

目的合成铜(II)卟啉配合物并研究其与c-myc - g -四重体DNA的相互作用。方法采用常规加热法合成5-对羟基苯基- 10,15,20 -三(对甲氧基苯基)铜(II)卟啉配合物[p-HTMOPPCu (II)]。采用紫外(UV)滴定法、荧光滴定法、荧光共振能量转移(FRET)熔点法和竞争法研究了p-HTMOPPCu (II)与c-myc g -四重体DNA的相互作用。结果紫外吸收光谱和荧光光谱结果表明,p-HTMOPPCu (II)配合物与c-myc - g -四重体DNA结合较好;FRET熔点试验和竞争熔点试验表明,p-HTMOPPCu (II)可以选择性地结合和稳定c-myc g -四重体DNA。结论- htmoppcu (II)可结合并稳定c-myc g -四重体DNA,有望发展成为一类靶向c-myc g -四重体DNA的小分子抑制剂,用于临床治疗肿瘤。
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引用次数: 0
New insights into the antitumor potential of natural piericidins 天然杀皮素抗肿瘤潜能的新认识
Pub Date : 2021-09-01 DOI: 10.1016/S2707-3688(23)00076-6
SHE Jianglian , ZHOU Xuefeng

Piericidins are a family of α-pyridone antibiotics with fascinating biological activity produced by actinomycetes, derived from land soil, insect or marine samples. There are 39 natural piericidins reported before 2016, and most of them are obtained from soil actinomycetes. However, marine-derived Streptomyces isolates have been showed great importance to produce piericidins with new structures in recent 5 years. This review covers the 40 natural piericidins reported after 2016, together with their obvious cytotoxic activities against cancer cell lines. Their structure–activity relationships are also discussed briefly. The anti-tumor potential, especially as lead compounds for anti-renal cell carcinoma agents, is of great concern recently. This review helps to provide comprehensive chemical information and new insights into the antitumor potential of piericidins.

Piericidins是一类由放线菌产生的具有良好生物活性的α-吡啶酮类抗生素,来源于陆地、土壤、昆虫或海洋样品。2016年以前共报道了39种天然杀梨素,其中大部分来源于土壤放线菌。然而,近5年来,海洋链霉菌分离株在生产具有新结构的杀环菌素方面显示出重要的作用。本文综述了2016年以来报道的40种天然匹利霉素,以及它们对癌细胞的明显细胞毒活性。并简要讨论了它们的构效关系。其抗肿瘤潜能,特别是作为抗肾细胞癌药物的先导化合物,近年来备受关注。这一综述有助于提供全面的化学信息和对皮利西汀抗肿瘤潜力的新认识。
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引用次数: 0
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Journal of Holistic Integrative Pharmacy
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