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Tissue-specific comparative transcriptome analysis reveals candidate genes involved in lignans biosynthesis in Saururus chinensis 组织特异性比较转录组分析揭示了参与中国龙骨木脂素生物合成的候选基因
Pub Date : 2023-03-01 DOI: 10.1016/S2707-3688(23)00092-4
Xiaolu LIANG , Chumei ZHANG , Qiuping LIANG , Kunping LI

Objective

To investigate the functional genes involved in the lignans biosynthesis in Saururus chinensis.

Methods

An RNA-Seq based tissue-specific comparative transcriptome analysis of S. chinensis leaves and rhizomes was performed, and an up-to-date bioinformatical analysis was carried out to discover the candidate functional genes. mRNA expression of part of the candidate genes were confirmed by qRT-PCR.

Results

According to the De novo transcriptome assembly, 49 430 unigenes in S. chinensis were presented and 33 222 unigenes (67.21%) were functionally annotated. Successively, 13 031 (26.36%) differentially expressed genes were filtered, and then GO and KEGG classification and enrichment analysis combined Swissprot function prediction revealed twenty-eight candidate genes encoding twelve enzymes involved in lignans biosynthesis pathways. The qRT-PCR results were consistent with the RNA-Seq analysis for the candidate genes.

Conclusion

These results enrich our knowledge on lignans biosynthesis-related functional genes and facilitate further synthetic biology research on specific lignans in S. chinensis.

目的研究华家龙木脂素合成过程中涉及的功能基因。方法采用基于RNA-Seq的组织特异性比较转录组分析方法,对紫荆叶片和根茎进行比较转录组分析,并进行最新的生物信息学分析,发现候选功能基因。qRT-PCR证实部分候选基因的mRNA表达。结果根据De novo转录组组装结果,共获得49 430个单基因,其中33 222个(67.21%)被功能注释。依次筛选13 031个差异表达基因(26.36%),结合Swissprot功能预测,通过GO和KEGG分类富集分析,得到28个候选基因,编码12种参与木脂素生物合成途径的酶。qRT-PCR结果与候选基因的RNA-Seq分析结果一致。结论这些结果丰富了我们对木脂素生物合成相关功能基因的认识,为进一步研究木脂素特异性合成生物学奠定了基础。
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引用次数: 0
The volatile oil from Acori Graminei Rhizoma downregulates NMDARs-ERK1/2-CREB signaling pathway to alleviate pain related emotions induced by inflammatory pain in rats 木耳挥发油下调NMDARs-ERK1/2-CREB信号通路,减轻炎症性疼痛引起的疼痛相关情绪
Pub Date : 2023-03-01 DOI: 10.1016/S2707-3688(23)00094-8
Shiqi LI , Cuizhu YANG , Runheng ZHANG , Shuhan WANG , Yaqi YANG , Jing LIU , Guoying LI , Yuxin MA

Objective

To investigate whether Acori Graminei Rhizoma (AGR) volatile oil can reduce inflammatory pain-induced pain-related mood in rats by downregulating NMDARs-ERK 1/2-CREB signaling pathway.

Methods

Thirty-six male SD rats were randomly divided into six groups: control group, sham group, complete Freund's adjuvant (CFA) group, CFA + 0.1 mL/10 g volatile oil group, CFA + 0.2 mL/10 g volatile oil group, and CFA + 0.4 mL/10 g volatile oil group. Six rats in each group were gavaged for 21 days and tested for mechanical pain hypersensitivity and positional avoidance (PEAP) before and after drug treatment. In addition, another batch of thirty-six male SD rats were randomly divided into six groups, including control, sham, CFA, CFA + saline, CFA + 0.1 mg/kg NMDA, and CFA + 0.1 mg/kg Ifenprodil groups. The control group did not receive any treatment, and the sham group received the same volume of sterile saline at the same site. Animals in each group were tested for mechanical pain hypersensitivity and positional avoidance before and after drug treatment. The expression levels of NMDAR1, NMDAR2A, NMDAR2A2B, mGlur1, ERK 1/2, CREB, and c-Fos in the basolateral amygdala (BLA) were determined by immunofluorescent staining and Western blot methods.

Results

AGR essential oil could reduce mechanical hyperalgesia and position avoidance in animals caused by CFA, and down-regulate NMDARs, mGlur1/5, ERK 1/2 and CREB expression. While up-regulation of c-Fos expression by NMDAR inhibitor Ifenprodil, reversed the above phenomena.

Conclusion

AGR essential oil alleviates inflammatory pain-induced pain-related mood in rats through downregulation of the NMDARs-ERK1/2-CREB signaling pathway.

目的通过下调NMDARs ERK1/2-CREB信号通路,探讨阿果挥发油是否能减轻炎症性疼痛诱导的大鼠疼痛相关情绪。方法36只雄性SD大鼠随机分为6组:对照组、假手术组、完全弗氏佐剂(CFA)组、CFA+0.1mL/10g挥发油组、CFC+0.2mL/10g挥精油组和CFA+0.4mL/10g挥油组。每组6只大鼠灌胃21天,并在药物治疗前后测试机械性疼痛超敏反应和位置回避(PEAP)。另一批雄性SD大鼠36只,随机分为6组,分别为对照组、假手术组、CFA组、CFA+生理盐水组、CFA+0.1mg/kg NMDA组和CFA+0.1mg/kg布洛芬组。对照组未接受任何治疗,假手术组在同一部位接受相同体积的无菌盐水。在药物治疗前后,对每组动物的机械性疼痛超敏反应和体位回避进行测试。通过免疫荧光染色和蛋白质印迹法测定基底外侧杏仁核(BLA)中NMDAR1、NMDAR2A、NMDAR2A2B、mGlur1、ERK1/2、CREB和c-Fos的表达水平。结果AGR精油可减少CFA引起的动物机械性痛觉过敏和位置回避,并下调NMDARs、mGlur1/5、ERK1/2和CREB的表达。NMDAR抑制剂Ifenprodil上调c-Fos的表达,逆转了上述现象。结论AGR精油通过下调NMDARs-ERK1/2-CRB信号通路,减轻炎症性疼痛诱导的大鼠疼痛相关情绪。
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引用次数: 0
Molecular mechanism and rule of TCM prescriptions containing Alismatis Rhizoma in the clinical treatment of hyperlipidemia based on data mining and network pharmacology 基于数据挖掘和网络药理学的泽泻方临床治疗高脂血症的分子机制和规律
Pub Date : 2022-12-01 DOI: 10.1016/S2707-3688(23)00005-5
Ruohong JIANG , Xiangyue WEN , Yaming ZHANG , Xuehua LU , Xiaomei XU , Lisha LI , Rongqing XU , Wenjin LIN

Objective

The clinical treatment rules and mechanism of Alismatis Rhizoma prescription for hyperlipidemia treatment were analyzed based on data mining and network pharmacology.

Methods

The CNKI, Wanfang, and PubMed databases were searched to collect the prescriptions containing Alismatis Rhizoma for the treatment of hyperlipidemia, and the Apriori algorithm was employed to mine the hidden drug compatibility rules and drug pairs in each prescription. The chemical components and target information of drug pairs were analyzed using the TTCMSP, PubChem, and SwissTargetPrediction databases, and the disease targets were screened using the DrugBank database. The intersection of the two was also obtained. Cytoscape was employed to obtain the core targets of the prescription for the treatment of hyperlipidemia, and then the KEGG pathway of the intersection targets was enriched and analyzed using the DAVID database. Molecular docking of core chemical components and key targets and visualization of the docking results were performed using AutoDock and the Discovery Studio 2016 Client platform, respectively. Finally, it was verified by in vitro cell experiments.

Results

The drug pair with the highest support was hawthorn–Salvia miltiorrhiza–Alismatis Rhizoma. This pair contained 112 active components, 384 targets highly correlated with the active components, 111 targets related to hyperlipidemia, and 45 intersection targets of drugs and diseases. Biological function and target pathway enrichment analysis revealed that the biological process of hawthorn–Salvia miltiorrhiza–Alismatis Rhizoma in the treatment of hyperlipidemia was mainly related to steroid metabolism, drug reaction, and redox process. The results of in vitro experiments indicated that Alisol A could reduce cell lipid accumulation and total cholesterol (TC) and TG levels, upregulate of ABCB1 and downregulate of CYP1A2, CYP3A4, and SLC6A4 mRNA expression.

Conclusion

Network pharmacology analysis revealed that the hawthorn–Salvia miltiorrhiza–Alismatis Rhizoma herb pair can treat hyperlipidemia through multiple targets and pathways, which provide a basis for further study of traditional Chinese medicine in the treatment of hyperlipidemia.

目的基于数据挖掘和网络药理学分析泽泻方治疗高脂血症的临床治疗规律和作用机制。方法检索中国知网(CNKI)、万方数据库和PubMed数据库,收集含泽泻治疗高脂血症的处方,采用Apriori算法挖掘处方中隐藏的药物配伍规律和药物对。使用TTCMSP、PubChem和SwissTargetPrediction数据库分析药物对的化学成分和靶点信息,使用DrugBank数据库筛选疾病靶点。得到了两者的交点。利用Cytoscape获得治疗高脂血症处方的核心靶点,然后利用DAVID数据库对交叉靶点的KEGG通路进行富集和分析。分别使用AutoDock和Discovery Studio 2016 Client平台对核心化学成分和关键靶点进行分子对接,并对对接结果进行可视化。最后,通过体外细胞实验对其进行验证。结果支持度最高的药物对为山楂-丹参-泽泻。该对含有112个有效成分,384个与有效成分高度相关的靶点,111个与高脂血症相关的靶点,45个与药物和疾病交叉的靶点。生物学功能和靶通路富集分析表明,山楂-丹参-泽泻治疗高脂血症的生物学过程主要与类固醇代谢、药物反应和氧化还原过程有关。体外实验结果表明,Alisol A可降低细胞脂质积累、总胆固醇(TC)和TG水平,上调ABCB1,下调CYP1A2、CYP3A4和SLC6A4 mRNA表达。结论网络药理学分析显示,山楂-丹参-泽泻这对药材可通过多靶点、多途径治疗高脂血症,为进一步研究中药治疗高脂血症提供了基础。
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引用次数: 0
Ursolic acid induces apoptosis and autophagy of HCT-8/5-FU cells 熊果酸诱导HCT-8/5-FU细胞凋亡和自噬
Pub Date : 2022-12-01 DOI: 10.1016/S2707-3688(23)00001-8
Jinyan ZHAO , Shilan CHEN , Xuejiao WANG , Haixia SHANG , Jiao PENG , Jiumao LIN

Objective

To observe the effects of ursolic acid (UA) on the apoptosis, autophagy and mTOR of human colorectal cancer (CRC) cells resistant to 5-FU (HCT-8/5-FU), and explore the mechanisms of UA reversing the multidrug resistance (MDR) of CRC.

Methods

HCT-8 cells and its resistant cells to 5-FU (HCT-8/5-FU) were cultured to calculate the resistant index and confirmed the resistance of HCT-8/5-FU. The MTT assays were used to screen the suitable concentrations and the reversal fold of UA. The efflux function, proliferation, apoptosis, autophagy and their correlated proteins were determined through Doxorubucin staining, Rhodamine 123 staining, colony formation, Annexin V-PI double staining, Cyto-ID staining and Western blot after the HCT-8/5-FU were intervened with UA for 48 h.

Results

HCT-8/5-FU cells are resistant to different chemotherapeutics, UA could reverse the MDR effectively. Furtherly, UA down-regulates the expression of ABCB1, ABCG2, p62, up-regulates Bax/Bcl-2 and LC3II/LC3I to inhibit the drug-efflux (P<0.05) and induce the apoptosis (P<0.05) and autophagy (P<0.05) via inhibiting the phosphorylation of mTOR.

Conclusion

UA induces the apoptosis and autophagy, blocks the proliferation of HCT-8/5-FU cells via inhibiting the phosphoralation of mTOR, that maybe the important mechanism by which UA reverses the MDR of CRC.

目的观察熊果酸(UA)对人结直肠癌(CRC) 5-FU耐药细胞(HCT-8/5-FU)凋亡、自噬及mTOR的影响,探讨UA逆转结直肠癌多药耐药(MDR)的机制。方法培养shct -8细胞及其5-FU耐药细胞(HCT-8/5-FU),计算耐药指数,确认HCT-8/5-FU耐药。采用MTT法筛选UA的适宜浓度和逆转折叠。用UA干预HCT-8/5-FU 48 h后,通过多柔布星染色、罗丹明123染色、菌落形成、Annexin V-PI双染色、cell - id染色和Western blot检测细胞外排功能、增殖、凋亡、自噬及其相关蛋白的变化。结果HCT-8/5-FU细胞对不同化疗药物均有耐药性,UA可有效逆转MDR。此外,UA下调ABCB1、ABCG2、p62的表达,上调Bax/Bcl-2和LC3II/LC3I的表达,通过抑制mTOR磷酸化抑制药物外排(P<0.05),诱导细胞凋亡(P<0.05)和自噬(P<0.05)。结论UA通过抑制mTOR的磷酸化,诱导HCT-8/5-FU细胞凋亡和自噬,抑制细胞增殖,这可能是UA逆转CRC MDR的重要机制。
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引用次数: 0
Oxidative low-density lipoprotein oxLDL induces pyroptosis in trophoblast cells HTR-8/Svneo by downregulating TET2 氧化性低密度脂蛋白oxLDL通过下调TET2诱导滋养细胞HTR-8/Svneo焦亡
Pub Date : 2022-12-01 DOI: 10.1016/S2707-3688(23)00006-7
Ting TAO , Jing YAN , Ziling LIAO , Wenmao ZHANG , Changqiong XU , Ran LI

Objective

To investigate pyroptosis in the trophoblast cells HTR-8/Svneo induced by TET2 in oxidized low-density lipoprotein (oxLDL).

Methods

HTR-8/Svneo cells were treated with vehicle (0 mg/L) and 50 mg/L oxLDL for 24 h. The effects of oxLDL on TET2 expression in HTR-8/Svneo cells were detected by Western blot. Knockdown of TET2 was performed in HTR-8/Svneo cells using si-TET2. CCK8, Transwell, and wound healing assays were used to detect the effect of TET2 knockdown on the proliferation, cell cycle, migration, and invasion of HTR-8/Svneo cells, respectively. Western blot was used to quantify the expression levels of the pyroptosis proteins GSDMD and caspase-1 in si-TET2 treated cells.

Results

oxLDL downregulates TET2 expression in a concentration-dependent manner. TET2 knockdown inhibits HTR-8/Svneo invasion and migration but promotes cell proliferation. Western blot results showed that TET2 knockdown upgregulated the expression of GSDMD and caspase-1.

Conclusion

oxLDL induces pyroptosis of HTR-8/Svneo by downregulating TET2 expression, resulting in decreased trophoblast invasion and migration. These data suggest that TET2-induced pyroptosis play a critical role in gestational pathologies, such as preeclampsia. Further studies can clarify the mechanisms of this process and elucidate potential preventive and therapeutic targets.

目的探讨TET2对氧化低密度脂蛋白(oxLDL)滋养细胞HTR-8/Svneo的热凋亡作用。方法用载药(0 mg/L)和oxLDL (50 mg/L)处理shtr -8/Svneo细胞24 h, Western blot检测oxLDL对HTR-8/Svneo细胞TET2表达的影响。在HTR-8/Svneo细胞中使用si-TET2进行TET2的敲除。CCK8、Transwell和创面愈合实验分别检测TET2敲低对HTR-8/Svneo细胞增殖、细胞周期、迁移和侵袭的影响。Western blot法定量si-TET2处理细胞中焦亡蛋白GSDMD和caspase-1的表达水平。结果soxldl呈浓度依赖性下调TET2表达。TET2敲低抑制HTR-8/Svneo侵袭和迁移,但促进细胞增殖。Western blot结果显示,TET2敲低可上调GSDMD和caspase-1的表达。结论oxldl通过下调TET2表达诱导HTR-8/Svneo细胞焦亡,减少滋养细胞侵袭和迁移。这些数据表明,tet2诱导的焦亡在妊娠病理中起关键作用,如先兆子痫。进一步的研究可以阐明这一过程的机制,并阐明潜在的预防和治疗靶点。
{"title":"Oxidative low-density lipoprotein oxLDL induces pyroptosis in trophoblast cells HTR-8/Svneo by downregulating TET2","authors":"Ting TAO ,&nbsp;Jing YAN ,&nbsp;Ziling LIAO ,&nbsp;Wenmao ZHANG ,&nbsp;Changqiong XU ,&nbsp;Ran LI","doi":"10.1016/S2707-3688(23)00006-7","DOIUrl":"10.1016/S2707-3688(23)00006-7","url":null,"abstract":"<div><h3>Objective</h3><p>To investigate pyroptosis in the trophoblast cells HTR-8/Svneo induced by TET2 in oxidized low-density lipoprotein (oxLDL).</p></div><div><h3>Methods</h3><p>HTR-8/Svneo cells were treated with vehicle (0 mg/L) and 50 mg/L oxLDL for 24 h. The effects of oxLDL on TET2 expression in HTR-8/Svneo cells were detected by Western blot. Knockdown of TET2 was performed in HTR-8/Svneo cells using si-TET2. CCK8, Transwell, and wound healing assays were used to detect the effect of TET2 knockdown on the proliferation, cell cycle, migration, and invasion of HTR-8/Svneo cells, respectively. Western blot was used to quantify the expression levels of the pyroptosis proteins GSDMD and caspase-1 in si-TET2 treated cells.</p></div><div><h3>Results</h3><p>oxLDL downregulates TET2 expression in a concentration-dependent manner. TET2 knockdown inhibits HTR-8/Svneo invasion and migration but promotes cell proliferation. Western blot results showed that TET2 knockdown upgregulated the expression of GSDMD and caspase-1.</p></div><div><h3>Conclusion</h3><p>oxLDL induces pyroptosis of HTR-8/Svneo by downregulating TET2 expression, resulting in decreased trophoblast invasion and migration. These data suggest that TET2-induced pyroptosis play a critical role in gestational pathologies, such as preeclampsia. Further studies can clarify the mechanisms of this process and elucidate potential preventive and therapeutic targets.</p></div>","PeriodicalId":100787,"journal":{"name":"Journal of Holistic Integrative Pharmacy","volume":"3 4","pages":"Pages 380-387"},"PeriodicalIF":0.0,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2707368823000067/pdfft?md5=fd4e0a6d71664212539b57b7fa276789&pid=1-s2.0-S2707368823000067-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"72778685","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect and mechanism of Buyang Huanwu decoction on retinal inflammation in streptozotocin-induced diabetic rats 补阳还五汤对链脲佐菌素致糖尿病大鼠视网膜炎症的影响及机制
Pub Date : 2022-12-01 DOI: 10.1016/S2707-3688(23)00007-9
Wencan LI, Qichang XING, Xiang LIU, Wei LI, Zheng LIU, Jiani ZHANG

Objective

To observe the protective effect of Buyang Huanwu decoction (BYHWD) against retinal inflammation in diabetic rats.

Methods

Healthy male Wistar rats were randomly divided into normal and diabetic model groups. Diabetic rats were given a one-time intraperitoneal injection of streptozotocin (STZ) to establish a diabetic phenotype and were randomly assigned to the negative control (saline), positive control (calcium dobesilate), and BYHWD treatment groups. After 8 weeks of treatment, fluorescein-labeled dextran and Evans blue dye were injected into the tail vein to observe vascular permeability and vascular leakage in the retina, respectively. Perfusion of fluorescein-labeled concanavalin was used to detect adhesion in rat retinal leukocytes. Western blotting was used to quantify the expression levels of the inflammatory factors TNF-α, NF-κBp65, and p-NF-κBp65 in retinal tissue.

Results

Compared with nondiabetic rats, saline-treated diabetic rats showed significantly increased retinal vascular leakage, leukocyte adhesion, and protein levels of TNF-α and p-NF-κBp65 (P<0.05). These effects were significantly reduced in the positive control and BYHWD groups (P<0.05).

Conclusion

Buyang Huanwu decoction can ameliorate retinal inflammation in STZ-induced diabetic rats. Its mechanism of action may be related to the inhibition of TNF-α expression and NF-κB pathway activation.

目的观察补阳还五汤对糖尿病大鼠视网膜炎症的保护作用。方法将健康雄性Wistar大鼠随机分为正常组和糖尿病模型组。糖尿病大鼠一次性腹腔注射链脲佐菌素(STZ)建立糖尿病表型,随机分为阴性对照组(生理盐水)、阳性对照组(多苯磺酸钙)和BYHWD治疗组。治疗8周后,尾静脉注射荧光素标记的葡聚糖和埃文斯蓝染料,分别观察视网膜血管通透性和血管渗漏情况。灌注荧光素标记的豆豆蛋白检测大鼠视网膜白细胞粘附。Western blotting法测定大鼠视网膜组织中炎性因子TNF-α、NF-κBp65、p-NF-κBp65的表达水平。结果与非糖尿病大鼠比较,经盐处理的糖尿病大鼠视网膜血管渗漏、白细胞粘附、TNF-α和p-NF-κBp65蛋白水平显著升高(p < 0.05)。这些影响在阳性对照组和BYHWD组显著降低(P<0.05)。结论补阳还五汤能改善stz诱导的糖尿病大鼠视网膜炎症。其作用机制可能与抑制TNF-α表达和NF-κB通路激活有关。
{"title":"Effect and mechanism of Buyang Huanwu decoction on retinal inflammation in streptozotocin-induced diabetic rats","authors":"Wencan LI,&nbsp;Qichang XING,&nbsp;Xiang LIU,&nbsp;Wei LI,&nbsp;Zheng LIU,&nbsp;Jiani ZHANG","doi":"10.1016/S2707-3688(23)00007-9","DOIUrl":"10.1016/S2707-3688(23)00007-9","url":null,"abstract":"<div><h3>Objective</h3><p>To observe the protective effect of Buyang Huanwu decoction (BYHWD) against retinal inflammation in diabetic rats.</p></div><div><h3>Methods</h3><p>Healthy male Wistar rats were randomly divided into normal and diabetic model groups. Diabetic rats were given a one-time intraperitoneal injection of streptozotocin (STZ) to establish a diabetic phenotype and were randomly assigned to the negative control (saline), positive control (calcium dobesilate), and BYHWD treatment groups. After 8 weeks of treatment, fluorescein-labeled dextran and Evans blue dye were injected into the tail vein to observe vascular permeability and vascular leakage in the retina, respectively. Perfusion of fluorescein-labeled concanavalin was used to detect adhesion in rat retinal leukocytes. Western blotting was used to quantify the expression levels of the inflammatory factors TNF-α, NF-<em>κ</em>Bp65, and <em>p</em>-NF-<em>κ</em>Bp65 in retinal tissue.</p></div><div><h3>Results</h3><p>Compared with nondiabetic rats, saline-treated diabetic rats showed significantly increased retinal vascular leakage, leukocyte adhesion, and protein levels of TNF-α and <em>p</em>-NF-<em>κ</em>Bp65 (<em>P</em>&lt;0.05). These effects were significantly reduced in the positive control and BYHWD groups (<em>P</em>&lt;0.05).</p></div><div><h3>Conclusion</h3><p>Buyang Huanwu decoction can ameliorate retinal inflammation in STZ-induced diabetic rats. Its mechanism of action may be related to the inhibition of TNF-α expression and NF-<em>κ</em>B pathway activation.</p></div>","PeriodicalId":100787,"journal":{"name":"Journal of Holistic Integrative Pharmacy","volume":"3 4","pages":"Pages 388-395"},"PeriodicalIF":0.0,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2707368823000079/pdfft?md5=5ccd3b2e8320adf3349b27654b61b06d&pid=1-s2.0-S2707368823000079-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73081152","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Analysis on the treatment of acne by Sanhuang with network pharmacology and experimental research 三黄治疗痤疮的网络药理学分析及实验研究
Pub Date : 2022-12-01 DOI: 10.1016/S2707-3688(23)00003-1
Ju PENG , Yan WANG , Zhancao LI , Xi LUO , Jun SHI , Limin ZHAO , Ping ZHAO

Objective

To explore the main active components and potential targets of “Sanhuang Xiexin decoction” (Sanhuang) against acne based on network pharmacology and molecular docking technology, and research the bacteriostatic mechanism by biochemical experiments.

Methods

Pharmacological database and Analysis platform of the Traditional Chinese Medicine System (TCMSP) and SwissTarget database were used to obtain the active components and the targets of Sanhuang in the treatment of acne, respectively. The acne-related targets were screened by OMIM, GeneCards, and DisGeNET databases, and the interaction targets were analyzed by Cytoscape and String databases, followed with enrichment analysis by Genome Encyclopedia (KEGG) and Gene Ontology (GO). The predicted results were validated by molecular docking. The bacteriostatic zones of Sanhuang to acne were determined by Oxford cup method, and the minimum bacteriostasis concentration was obtained by double dilution method. The bacteria morphology change in the presence of Sanhuang was observed by scanning electron microscope and the ionic leakage rate was detected to reflect the permeability of bacterial cell walls. Finally, the IL-6 expression of drug-treated acne was determined.

Results

From Rheum palmatum L, Coptis chinensis Franch, and Scutellaria baicalensis Georgi, 34, 25 and 44 active ingredients were selected, and 145, 216 and 163 compound targets were screened out, respectively. There are 123 intersection targets of Sanhuang and acne, which mainly function through IL-17, MAPK, PI3K-Akt, and TNF signaling pathways. Molecular simulation results showed that aloe-emodin and quercetin in Coptis Chinensis Franch had strong affinities with the core targets of TNF, IL-6, INS, and AKT1. The antibacterial zones of Sanhuang at concentrations of 0.1 g/mL and 0.5 g/mL were (21.0±0.3) mm and (26.1±0.9) mm, respectively, which had an obvious dose-dependent relationship. The minimum inhibitory concentration of Sanhuang was 4 mg/mL. Moreover, in the drug-treated acne, the morphology of bacterial cells was destroyed, the permeability of cell walls was increased, and the growth of propionibacterium acnes was inhibited. The results of cell experiment showed that Sanhuang inhibited the expression of IL-6.

Conclusion

Based on network pharmacology method, we predicted the mechanism of Sanhuang in the treatment of acne which was charactered by multi-component, multi-target, and multi-pathway, and verified the therapeutic effect of Sanhuang on acne by the biochemical method such as bacteriostasis test and cell experiment. Sanhuang can inhibit the growth of Propionibacterium acnes mainly by regulating the target genes such as TNF, IL-6, INS, and AKT1.

目的基于网络药理学和分子对接技术,探索“三黄泻心汤”(简称“三黄”)抗痤疮的主要有效成分和潜在靶点,并通过生化实验研究其抑菌机制。方法采用药理学数据库、中药系统分析平台(TCMSP)数据库和SwissTarget数据库,分别获取三黄治疗痤疮的有效成分和靶点。通过OMIM、GeneCards和DisGeNET数据库筛选与痤痘相关的靶点,通过Cytoscape和String数据库分析相互作用靶点,然后通过Genome Encyclopedia (KEGG)和Gene Ontology (GO)进行富集分析。通过分子对接验证了预测结果。采用牛津杯法确定三黄对痤疮的抑菌带,采用双倍稀释法获得最小抑菌浓度。通过扫描电镜观察三黄存在下细菌形态的变化,检测离子泄漏率,反映细菌细胞壁的通透性。最后,检测药物治疗后痤疮组织中IL-6的表达。结果从掌大黄、黄连、黄芩中分别筛选出34、25、44个有效成分,筛选出145、216、163个复方靶点。三黄与痤疮有123个交叉靶点,主要通过IL-17、MAPK、PI3K-Akt、TNF等信号通路起作用。分子模拟结果显示,黄连中的芦荟大黄素和槲皮素与TNF、IL-6、INS、AKT1等核心靶点具有较强的亲和性。三黄在0.1 g/mL和0.5 g/mL浓度下的抑菌带分别为(21.0±0.3)mm和(26.1±0.9)mm,呈明显的剂量依赖关系。三黄最低抑菌浓度为4 mg/mL。此外,在药物治疗的痤疮中,细菌细胞的形态被破坏,细胞壁的通透性增加,痤疮丙酸杆菌的生长受到抑制。细胞实验结果显示,三黄对IL-6的表达有抑制作用。结论基于网络药理学方法,预测了三黄治疗痤疮多组分、多靶点、多通路的作用机制,并通过抑菌试验、细胞实验等生化方法验证了三黄对痤疮的治疗效果。三黄主要通过调节TNF、IL-6、INS、AKT1等靶基因抑制痤疮丙酸杆菌的生长。
{"title":"Analysis on the treatment of acne by Sanhuang with network pharmacology and experimental research","authors":"Ju PENG ,&nbsp;Yan WANG ,&nbsp;Zhancao LI ,&nbsp;Xi LUO ,&nbsp;Jun SHI ,&nbsp;Limin ZHAO ,&nbsp;Ping ZHAO","doi":"10.1016/S2707-3688(23)00003-1","DOIUrl":"10.1016/S2707-3688(23)00003-1","url":null,"abstract":"<div><h3>Objective</h3><p>To explore the main active components and potential targets of “Sanhuang Xiexin decoction” (Sanhuang) against acne based on network pharmacology and molecular docking technology, and research the bacteriostatic mechanism by biochemical experiments.</p></div><div><h3>Methods</h3><p>Pharmacological database and Analysis platform of the Traditional Chinese Medicine System (TCMSP) and SwissTarget database were used to obtain the active components and the targets of Sanhuang in the treatment of acne, respectively. The acne-related targets were screened by OMIM, GeneCards, and DisGeNET databases, and the interaction targets were analyzed by Cytoscape and String databases, followed with enrichment analysis by Genome Encyclopedia (KEGG) and Gene Ontology (GO). The predicted results were validated by molecular docking. The bacteriostatic zones of Sanhuang to acne were determined by Oxford cup method, and the minimum bacteriostasis concentration was obtained by double dilution method. The bacteria morphology change in the presence of Sanhuang was observed by scanning electron microscope and the ionic leakage rate was detected to reflect the permeability of bacterial cell walls. Finally, the IL-6 expression of drug-treated acne was determined.</p></div><div><h3>Results</h3><p>From <em>Rheum palmatum L, Coptis chinensis Franch,</em> and <em>Scutellaria baicalensis Georgi,</em> 34, 25 and 44 active ingredients were selected, and 145, 216 and 163 compound targets were screened out, respectively. There are 123 intersection targets of Sanhuang and acne, which mainly function through IL-17, MAPK, PI3K-Akt, and TNF signaling pathways. Molecular simulation results showed that aloe-emodin and quercetin in <em>Coptis Chinensis Franch</em> had strong affinities with the core targets of TNF, IL-6, INS, and AKT1. The antibacterial zones of Sanhuang at concentrations of 0.1 g/mL and 0.5 g/mL were (21.0±0.3) mm and (26.1±0.9) mm, respectively, which had an obvious dose-dependent relationship. The minimum inhibitory concentration of Sanhuang was 4 mg/mL. Moreover, in the drug-treated acne, the morphology of bacterial cells was destroyed, the permeability of cell walls was increased, and the growth of propionibacterium acnes was inhibited. The results of cell experiment showed that Sanhuang inhibited the expression of IL-6.</p></div><div><h3>Conclusion</h3><p>Based on network pharmacology method, we predicted the mechanism of Sanhuang in the treatment of acne which was charactered by multi-component, multi-target, and multi-pathway, and verified the therapeutic effect of Sanhuang on acne by the biochemical method such as bacteriostasis test and cell experiment. Sanhuang can inhibit the growth of <em>Propionibacterium acnes</em> mainly by regulating the target genes such as TNF, IL-6, INS, and AKT1.</p></div>","PeriodicalId":100787,"journal":{"name":"Journal of Holistic Integrative Pharmacy","volume":"3 4","pages":"Pages 336-349"},"PeriodicalIF":0.0,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2707368823000031/pdfft?md5=7d8f0a450dbe34044b29ace6b72fe55c&pid=1-s2.0-S2707368823000031-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87313048","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Infarction or reperfusion-induced cardiac autophagy: role of microRNAs 梗死或再灌注诱导的心脏自噬:microrna的作用
Pub Date : 2022-12-01 DOI: 10.1016/S2707-3688(23)00008-0
Xiaoqi SHAO, Pingdong CAI, Yue ZHANG

The process of cardiomyocyte death is triggered by prolonged ischemia in the heart during myocardial infarction (MI). And the role of non-coding RNAs in the pathophysiology of cardiovascular diseases has become increasingly important in recent years. RNA molecules known as microRNAs (miRNAs) are small non-coding RNAs whose expression varies across organs. microRNAs play an important role in processes associated with autophagy, which contribute to the development of heart failure. These processes include mitochondrial integrity and function, antioxidant defense, oxidative stress, iron overload, ferroptosis, and survival pathways. microRNAs may serve as promising biomarkers and useful targets in the treatment of cardiovascular disease. For the development of new targeted drugs, it is vital to uncover how microRNA expression changes and how they regulate autophagy. In order to comprehend the mechanisms of myocardial infarction and ischemic reperfusion injury, it is crucial to understand how these two processes relate to each other. In this review, we will provide a brief introduction to microRNAs, autophagy, and associated medicine to microRNAs.

心肌梗死(MI)期间,心肌细胞的死亡是由心脏长时间缺血引起的。近年来,非编码rna在心血管疾病病理生理中的作用越来越重要。被称为microRNAs (miRNAs)的RNA分子是小的非编码RNA,其表达在不同器官中有所不同。microRNAs在自噬相关过程中发挥重要作用,自噬有助于心力衰竭的发展。这些过程包括线粒体完整性和功能、抗氧化防御、氧化应激、铁超载、铁凋亡和生存途径。microRNAs在心血管疾病的治疗中可能成为有前途的生物标志物和有用的靶点。对于新的靶向药物的开发,揭示microRNA表达的变化及其如何调节自噬是至关重要的。为了了解心肌梗死和缺血再灌注损伤的机制,了解这两个过程之间的相互关系至关重要。在这篇综述中,我们将简要介绍microRNAs,自噬和microRNAs的相关药物。
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引用次数: 0
Motor learning dysfunction and its association with neurotransmitters and gut microbiota dysbiosis in hepatic encephalopathy mice 肝性脑病小鼠运动学习功能障碍及其与神经递质和肠道菌群失调的关系
Pub Date : 2022-12-01 DOI: 10.1016/S2707-3688(23)00002-X
Yunqi SHAN , Haidan DENG , Baojun SHAN , Jiaying HUANG , Xinshu FENG , Xiaoming SUN

Objective

This study aims to investigate the potential mechanisms underlying motor learning dysfunction in hepatic encephalopathy (HE) mice using gut microbiota and neurochemicals.

Methods

C57BL/6 mice were intraperitoneally treated with thioacetamide to induce the HE model. Cytokines of TNF-α and ammonia in serum and motor cortex were tested using the ELISA kit. Rota-rod was used to assess the motor learning behavior of HE mice. The 16S rDNA analysis revealed gut microbiota species and abundance changes in HE mice. The 26 neurochemicals of control and HE mice were quantified and analyzed with different microbiota using the UPLC-TQ-MS technique.

Results

LEfSe analysis revealed that 25 genera differed significantly between healthy and HE mice. Correlation analysis revealed that the Escherichia_Shigella, Allobaculum, and Muribaculaceae were associated with higher adrenaline levels of hydrochloride, 4-aminobytyric acid, and L-glutamic acid and lower levels of L-histidine and histamine.

Conclusion

The neurotransmitter changes in motor cortex have some relationship with gut microbiota disturbances. This correlation may pave the way to explain the cognitive and motor learning dysfunction in HE mice.

目的利用肠道微生物群和神经化学物质探讨肝性脑病(HE)小鼠运动学习功能障碍的潜在机制。方法用硫乙酰胺腹腔注射sc57bl /6小鼠,建立HE模型。采用ELISA试剂盒检测血清和运动皮层中TNF-α和氨的细胞因子。采用旋转棒法评价HE小鼠的运动学习行为。16S rDNA分析揭示了HE小鼠肠道菌群种类和丰度的变化。采用UPLC-TQ-MS技术对对照组和HE小鼠的26种神经化学物质进行定量分析。结果fse分析显示,25个属在健康小鼠和HE小鼠之间存在显著差异。相关分析显示,志贺氏杆菌、异源杆菌和鼠耳杆菌科菌的肾上腺素水平较高,盐酸、4-氨基丁酸和l -谷氨酸水平较高,l -组氨酸和组胺水平较低。结论运动皮层神经递质变化与肠道菌群紊乱有一定关系。这种相关性可能为解释HE小鼠的认知和运动学习功能障碍铺平道路。
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引用次数: 0
Antiseptic property screening for 18 natural plants and efficiency–toxicity research of Coptis chinensis fermentation 18种天然植物防腐性能筛选及黄连发酵药效毒性研究
Pub Date : 2022-12-01 DOI: 10.1016/S2707-3688(23)00004-3
Fang ZHAO , Yan WANG , Yongyan PEI , Jun SHI , Ping ZHAO , Limin ZHAO

Objective

This study aimed to compare the antibacterial performance of 18 natural plants against six types of microorganisms that tend to grow in cosmetics and select the best natural antiseptic herbs with low toxicity and a broad antibacterial spectrum. The safety performance and effects of the antioxidant, whitening, and reduced inflammation of Coptis chinensis fermentation were explored.

Methods

The inhibition performance of the alcoholic extracts for the 18 natural plants against six microorganisms was compared by using the cylinder plate method. The MTT assay was used to determine the cell viability of C. chinensis extract and fermentation products. DPPH, hydroxyl, and ABTS radical scavenging rates as well as iron reduction ability were used to evaluate the antioxidant efficacy. In addition, the activity inhibition rate of tyrosinase and hyaluronidase indicated the whitening and anti-inflammatory properties of C. chinensis extract and fermentation broth.

Results

Results showed that among the 18 natural plants, C. chinensis extract had the most prominent inhibition circles and the smallest minimum inhibitory concentration (MIC) value against six microorganisms. After fermentation, the IC50 value of C. chinensis alcoholic extract increased significantly with the cell survival rate, indicating its low biosafety. The free radical scavenging rate, tyrosinase inhibition rate, and hyaluronidase inhibition rate of fermented C. chinensis extract increased significantly, showing better antioxidant activity, whitening activity, and anti-inflammatory activity than alcohol extract.

Conclusion

Among the 18 natural plants, C. chinensis has the most substantial antibacterial ability. After fermentation by yeast, the cytotoxicity of C. chinensis decreases, and the antioxidant, whitening, and anti-inflammatory activities increase, indicating that microbial fermentation attenuates toxicity and enhances the effect of plant preservatives.

目的比较18种天然植物对6种易在化妆品中生长的微生物的抑菌性能,筛选出低毒、抗菌谱广的天然抗菌草药。探讨了黄连发酵的安全性能及其抗氧化、美白、消炎作用。方法采用柱皿法比较18种天然植物醇提物对6种微生物的抑菌效果。采用MTT法测定五味子提取物和发酵产物的细胞活力。以DPPH、羟基和ABTS自由基清除率和铁还原能力评价其抗氧化效果。此外,酪氨酸酶和透明质酸酶的活性抑制率表明,五味子提取物和发酵液具有美白和抗炎作用。结果18种天然植物中,五倍子提取物对6种微生物的抑制圈最显著,最小抑制浓度(MIC)值最小。发酵后,五味子醇提物的IC50值随细胞存活率显著升高,表明其生物安全性较低。发酵五味子提取物的自由基清除率、酪氨酸酶抑制率和透明质酸酶抑制率显著提高,具有较好的抗氧化、美白和抗炎活性。结论在18种天然植物中,紫草的抑菌能力最强。经酵母发酵后,五味子的细胞毒性降低,抗氧化、美白和抗炎活性增强,说明微生物发酵可以减轻毒性,增强植物防腐剂的作用。
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引用次数: 0
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Journal of Holistic Integrative Pharmacy
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