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More evidence needed before upper respiratory tract point-of-care microbiological testing for respiratory infections is used in primary care. 在基层医疗机构使用上呼吸道微生物检测点检测呼吸道感染之前,需要更多的证据。
IF 14.2 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-09-07 DOI: 10.1016/j.cmi.2024.09.002
Beth Stuart,Alastair D Hay
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引用次数: 0
Early and better diagnosis for Lyme neuroborreliosis. 尽早更好地诊断莱姆神经源性疾病。
IF 10.9 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-09-07 DOI: 10.1016/j.cmi.2024.09.003
Alice Raffetin, Joppe W R Hovius, Benoît Jaulhac, Anna J Henningsson, Pierre Tattevin
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引用次数: 0
'How to manage adult patients with malaria in the non-endemic setting': author's response. 如何在非疟疾流行地区管理成年疟疾患者"--作者回复。
IF 10.9 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-09-06 DOI: 10.1016/j.cmi.2024.08.029
Spinello Antinori, Andrea Giacomelli, Giacomo Casalini, Anna Lisa Ridolfo
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引用次数: 0
Interplay of multiple carbapenemases and tigecycline resistance in Acinetobacter species: a serious combined threat. 醋酸杆菌中多种碳青霉烯酶和替加环素耐药性的相互作用:严重的综合威胁。
IF 10.9 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-08-30 DOI: 10.1016/j.cmi.2024.08.027
Xinyang Li, Yilu Zhuang, Yawen Yu, Huiqiong Jia, Yingying Kong, Jun Zhang, Xinyou Xie, Eliana Guedes Stehling, João Pedro Rueda Furlan, Zhemin Zhou, Zhi Ruan
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引用次数: 0
Diagnosing probable urinary tract infections in nursing home residents without indwelling catheters: a narrative review. 对未留置导尿管的养老院住户进行可能的尿路感染诊断:叙述性综述。
IF 10.9 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-08-30 DOI: 10.1016/j.cmi.2024.08.020
Carl Llor, Ana Moragas, Georg Ruppe, Jesper Lykkegaard, Malene Plejdrup Hansen, Valeria S Antsupova, Jette Nygaard Jensen, Anna Marie Theut, Davorina Petek, Nina Sodja, Anna Kowalczyk, Lars Bjerrum

Background: Overdiagnosis of urinary tract infections (UTIs) is one of the most common reasons for the unnecessary use of antibiotics in nursing homes, increasing the risk of missing serious conditions. Various decision tools and algorithms aim to aid in UTI diagnosis and the initiation of antibiotic therapy for residents. However, due to the lack of a clear reference standard, these tools vary widely and can be complex, with some requiring urine testing. As part of the European-funded IMAGINE project, aimed at improving antibiotic use for UTIs in nursing home residents, we have reviewed the recommendations.

Objectives: This review provides a comprehensive summary of the more relevant tools and algorithms aimed at identifying true UTIs among residents living in nursing homes and discusses the challenges in using these algorithms based on updated research.

Sources: The discussion is based on a relevant medical literature search and synthesis of the findings and published tools to provide an overview of the current state of improving the diagnosis of UTIs in nursing homes.

Content: The following topics are covered: prevalence of asymptomatic bacteriuria, diagnostic challenges, clinical criteria, urinary testing, and algorithms to be implemented in nursing home facilities.

Implications: Diagnosing UTIs in residents is challenging due to the high prevalence of asymptomatic bacteriuria and nonspecific urinary tract signs and symptoms among those with suspected UTIs. The fear of missing a UTI and the perceived antibiotic demands from residents and relatives might lead to overdiagnosis of this common condition. Despite their widespread use, urine dipsticks should not be recommended for geriatric patients. Patients who do not meet the minimum diagnostic criteria for UTIs should be evaluated for alternative conditions. Adherence to a simple algorithm can prevent unnecessary antibiotic courses without compromising resident safety.

背景:尿路感染(UTI)的过度诊断是养老院不必要使用抗生素的最常见原因之一,增加了漏诊严重疾病的风险。各种决策工具和算法旨在帮助UTI 诊断和对住院患者进行抗生素治疗。然而,由于缺乏明确的金标准,这些工具差异很大,而且可能很复杂,有些还需要进行尿检。作为欧洲资助的 IMAGINE 项目的一部分,旨在改善疗养院居民 UTI 抗生素的使用,我们对相关建议进行了综述:本综述全面总结了旨在识别疗养院居民真正尿毒症的相关工具和算法,并根据最新研究讨论了使用这些算法所面临的挑战:讨论基于相关医学文献检索,并对研究结果和已发表的工具进行综合,以概述改善疗养院 UTIs 诊断的现状:内容:涵盖以下主题:无症状菌尿的流行率、诊断挑战、临床标准、尿液检测以及养老院设施中应实施的算法:由于疑似尿毒症患者中无症状菌尿和非特异性尿路体征和症状的发生率很高,因此对住院患者进行尿毒症诊断具有挑战性。由于害怕漏诊尿路感染以及居民和亲属对抗生素的需求,可能会导致对这种常见疾病的过度诊断。尽管尿液滴定管被广泛使用,但不应推荐老年患者使用。对于不符合尿毒症最低诊断标准的患者,应评估其是否患有其他疾病。坚持使用简单的算法可以避免不必要的抗生素治疗,同时又不会影响住院患者的安全。
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引用次数: 0
How do I manage disseminated Mycobacterium avium complex disease in people with HIV? "如何管理艾滋病毒感染者的播散性复合分枝杆菌(MAC)疾病?
IF 10.9 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-08-30 DOI: 10.1016/j.cmi.2024.08.022
Tommaso Matucci, Giacomo Pozza, Angelo Roberto Raccagni, Alberto Borghetti, Silvia Nozza, Andrea Giacomelli, Niccolò Riccardi

Background: Advanced HIV disease (AHD) is increasing, with late presentation accounting for half of newly diagnosed people with HIV (PWH) in Europe. Mortality in late-presenting PWH remains high, and Mycobacterium avium complex (MAC) disease, among other opportunistic infections, presents several diagnostic and treatment challenges that lead, ultimately, to a poor clinical outcome.

Objectives: We aimed to provide guidance on the diagnosis and treatment of disseminated MAC disease (dMACd) in PWH.

Sources: We performed a review of original articles, meta-analyses, and systematic reviews retrieved from PubMed.

Content: We reviewed and discussed the most challenging steps in the management of PWH with AHD and dMACd: the current epidemiology in the era of effective antiretroviral treatment; clinical presentation and interpretation of symptoms in the context of other opportunistic infections and immune reconstitution; diagnosis, sampling, and timing to reach a definitive diagnosis; prophylaxis, treatment options, and indications for discontinuing MAC treatment; future perspectives; and the role of rifamycins in the treatment of dMACd.

Implications: Despite the widespread availability of effective antiretroviral treatment, dMACd still represents a major cause of morbidity and mortality in PWH with AHD. Residual challenges are mainly related to the difficulties and timing required to reach a definitive diagnosis, and the discussion regarding the role of rifamycins in the treatment of dMACd is still open.

背景:晚期艾滋病毒疾病(AHD)正在增加,在欧洲,新确诊的艾滋病毒感染者(PWH)中有一半是晚期患者。晚期艾滋病病毒感染者的死亡率仍然很高,而复合分枝杆菌病(MAC)与其他机会性感染一样,给诊断和治疗带来了诸多挑战,最终导致不良的临床结果:我们旨在为诊断和治疗 PWH 中的播散性 MAC 病(dMACd)提供指导:我们对从 PubMed 上检索到的原创文章、荟萃分析和系统综述进行了综述:内容:我们回顾并讨论了对患有AHD和dMACd的PWH进行管理的最具挑战性的步骤:在有效的抗逆转录病毒治疗(ART)时代的当前流行病学;临床表现以及在其他机会性感染和免疫重建背景下对症状的解释;诊断、取样和达到明确诊断的时机;预防、治疗选择以及停止MAC治疗的指征;未来展望以及利福霉素在治疗dMACd中的作用:意义:尽管有效的抗逆转录病毒疗法已得到广泛应用,但在患有艾滋病的残疾人中,麦角疯仍是发病和死亡的主要原因。余下的挑战主要与明确诊断所需的困难和时间有关,而关于利福霉素在治疗dMACd中的作用的讨论仍未结束。
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引用次数: 0
Heightened incidence of adverse events associated with a live attenuated varicella vaccine strain that lacks critical genetic polymorphisms in open reading frame 62 水痘减毒活疫苗株缺乏 ORF62 中的关键基因多态性,导致不良反应发生率升高。
IF 10.9 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-08-30 DOI: 10.1016/j.cmi.2024.08.018

Objectives

This study aimed to identify the specific vaccine strain associated with herpes zoster (HZ) in children following a series of diagnosed cases and to explore whether differences in single nucleotide polymorphisms (SNPs) among various vaccine strains are linked to an increased incidence of herpes zoster after vaccination.

Methods

From February 2021 to March 2024, children <12 years old suspected of vaccine-related varicella-like rash or HZ were included. Varicella zoster virus DNA isolated from the patients were sequenced to differentiate vaccine type versus wild-type. 3D protein structures of pORF62 were simulated using open reading frame 62 sequences extracted from whole genome sequencing of vOka, MAV/06, Oka/SK vaccines, and pOka reference.

Results

A total of 27 children with a median age of 2.1 (interquartile range, 1.5–3.4) years old presented with vaccine-related varicella-like rash (n = 4/27, 14.8%) or HZ (n = 23/27, 85.2%). One patient with varicella-like rash and 34.8% (n = 8/23) with HZ had disseminated skin involvement. All were immunized with the Oka/SK strain varicella vaccine. Genotyping showed 88.2% (n = 15/17) had SNPs specific to the Oka/SK strain, and two had SNPs considered pOka type contained within the Oka/SK vaccine. Despite accumulations of SNPs in ORF 62 of Oka/SK, the translated amino acid sequence and 3D protein structure were identical to wild-type pOka's pORF62. In vOKA and MAV/06, changes in amino acids occurred at two positions, S628G and R958G, within pORF62. The predicted 3D protein structure of vOka and MAV/06's pORF62 showed that the α helical structure within region I undergoes conformational change, potentially increasing difficulties in interactions with infection-related proteins and thereby decreasing virulence. pORF62 in pOka and Oka/SK exhibited more stable structure complex of the α helical structure.

Discussion

Lack of structural alternations in region I of pORF62 due to the absence of critical genetic polymorphisms in open reading frame 62 could be associated with the heightened incidence of adverse events.
研究目的本研究旨在通过一系列确诊病例,确定与儿童带状疱疹相关的特定疫苗株,并探讨不同疫苗株之间单核苷酸多态性(SNPs)的差异是否与接种后带状疱疹发病率的增加有关:方法:2021 年 2 月至 2024 年 3 月期间的儿童:共有 27 名中位数年龄为 2.1(IQR,1.5-3.4)岁的儿童出现与疫苗相关的水痘样皮疹(n=4/27,14.8%)或 HZ(n=23/27,85.2%)。一名水痘样皮疹患者和34.8%(n=8/23)的HZ患者有皮肤播散性受累。所有患者均接种了 Oka/SK 株水痘疫苗。基因分型结果显示,88.2%的患者(n=15/17)具有Oka/SK株的特异性SNPs,2名患者的SNPs被认为是Oka/SK疫苗中的pOka型。尽管在 Oka/SK 的 ORF 62 中积累了 SNPs,但翻译后的氨基酸序列和三维蛋白质结构与野生型 pOka 的 pORF62 相同。在 vOKA 和 MAV/06 中,pORF62 中 S628G 和 R958G 这两个位置的氨基酸发生了变化。vOka 和 MAV/06 的 pORF62 的预测三维蛋白质结构显示,区域 I 中的α螺旋结构发生了构象变化,可能会增加与感染相关蛋白相互作用的难度,从而降低毒力:结论:由于 ORF62 中缺乏关键的基因多态性,pORF62 的 I 区缺乏结构变化,这可能与不良事件的发生率增加有关。
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引用次数: 0
How to develop a controlled human infection model for Clostridioides difficile. 如何开发艰难梭状芽孢杆菌控制性人体感染模型。
IF 10.9 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-08-29 DOI: 10.1016/j.cmi.2024.08.025
Annefleur D O Hensen, Maria J G T Vehreschild, Dale N Gerding, Oleg Krut, Wilbur Chen, Vincent B Young, Saul Tzipori, Philipp Solbach, Malick Mahdi Gibani, Christopher Chiu, Sigrid C J de Keersmaecker, Dileep Dasyam, Sandra Morel, Jeanne-Marie Devaster, Nicoletta Corti, Ed J Kuijper, Meta Roestenberg, Wiep Klaas Smits

Background: Clostridioides difficile (C. difficile) remains the leading cause of healthcare-associated diarrhoea, posing treatment challenges because of antibiotic resistance and high relapse rates. Faecal microbiota transplantation is a novel treatment strategy to prevent relapses of C. difficile infection (CDI), however, the exact components conferring colonization resistance are unknown, hampering its translation to a medicinal product. The development of novel products independent of antibiotics, which increase colonization resistance or induce protective immune mechanisms is urgently needed.

Objectives: To establish a framework for a Controlled Human Infection Model (CHIM) of C. difficile, in which healthy volunteers are exposed to toxigenic C. difficile spores, offering the possibility to test novel approaches and identify microbiota and immunological targets. Whereas experimental exposure to non-toxigenic C. difficile has been done before, a toxigenic C. difficile CHIM faces ethical, scientific, logistical, and biosafety challenges.

Sources: Specific challenges in developing a C. difficile CHIM were discussed by a group of international experts during a workshop organized by Inno4Vac, an Innovative Health Initiative-funded consortium.

Content: The experts agreed that the main challenges are: developing a clinically relevant CHIM that induces mild to moderate CDI symptoms but not severe CDI, determining the optimal C. difficile inoculum dose, and understanding the timing and duration of antibiotic pretreatment in inducing susceptibility to CDI in healthy volunteers.

Implications: Should these challenges be tackled, a C. difficile CHIM will not only provide a way forward for the testing of novel products but also offer a framework for a better understanding of the pathophysiology, pathogenesis, and immunology of C. difficile colonization and infection.

背景:艰难梭菌(C. difficile)仍然是医疗相关性腹泻的主要病因,其抗生素耐药性和高复发率给治疗带来了挑战。粪便微生物群移植(FMT)是一种新型治疗策略,可预防艰难梭菌感染(CDI)复发,但产生定植耐药性的确切成分尚不清楚,这阻碍了将其转化为医药产品。我们迫切需要开发出独立于抗生素的新型产品,以提高耐定植性或诱导保护性免疫机制:建立艰难梭菌受控人类感染模型(CHIM)框架,让健康志愿者暴露于毒性艰难梭菌孢子中,为测试新方法、确定微生物群和免疫学靶点提供可能性。虽然以前曾进行过接触非致毒艰难梭菌(NTCD)的实验,但致毒艰难梭菌 CHIM 面临着伦理、科学、后勤和生物安全方面的挑战:在由国际医疗卫生机构(IHI)资助的 Inno4Vac 联合企业组织的一次研讨会上,一组国际专家讨论了开发艰难梭菌 CHIM 所面临的具体挑战:专家们一致认为主要挑战在于:开发一种与临床相关的 CHIM,诱导轻度至中度 CDI 症状,但不诱导重度 CDI;确定最佳艰难梭菌接种剂量;了解抗生素预处理在诱导健康志愿者对 CDI 易感性方面的时机和持续时间:如果能解决这些难题,艰难梭菌CHIM不仅能为新型产品的测试提供前进的方向,还能为更好地了解艰难梭菌定植和感染的病理生理学、发病机理和免疫学提供一个框架。
{"title":"How to develop a controlled human infection model for Clostridioides difficile.","authors":"Annefleur D O Hensen, Maria J G T Vehreschild, Dale N Gerding, Oleg Krut, Wilbur Chen, Vincent B Young, Saul Tzipori, Philipp Solbach, Malick Mahdi Gibani, Christopher Chiu, Sigrid C J de Keersmaecker, Dileep Dasyam, Sandra Morel, Jeanne-Marie Devaster, Nicoletta Corti, Ed J Kuijper, Meta Roestenberg, Wiep Klaas Smits","doi":"10.1016/j.cmi.2024.08.025","DOIUrl":"10.1016/j.cmi.2024.08.025","url":null,"abstract":"<p><strong>Background: </strong>Clostridioides difficile (C. difficile) remains the leading cause of healthcare-associated diarrhoea, posing treatment challenges because of antibiotic resistance and high relapse rates. Faecal microbiota transplantation is a novel treatment strategy to prevent relapses of C. difficile infection (CDI), however, the exact components conferring colonization resistance are unknown, hampering its translation to a medicinal product. The development of novel products independent of antibiotics, which increase colonization resistance or induce protective immune mechanisms is urgently needed.</p><p><strong>Objectives: </strong>To establish a framework for a Controlled Human Infection Model (CHIM) of C. difficile, in which healthy volunteers are exposed to toxigenic C. difficile spores, offering the possibility to test novel approaches and identify microbiota and immunological targets. Whereas experimental exposure to non-toxigenic C. difficile has been done before, a toxigenic C. difficile CHIM faces ethical, scientific, logistical, and biosafety challenges.</p><p><strong>Sources: </strong>Specific challenges in developing a C. difficile CHIM were discussed by a group of international experts during a workshop organized by Inno4Vac, an Innovative Health Initiative-funded consortium.</p><p><strong>Content: </strong>The experts agreed that the main challenges are: developing a clinically relevant CHIM that induces mild to moderate CDI symptoms but not severe CDI, determining the optimal C. difficile inoculum dose, and understanding the timing and duration of antibiotic pretreatment in inducing susceptibility to CDI in healthy volunteers.</p><p><strong>Implications: </strong>Should these challenges be tackled, a C. difficile CHIM will not only provide a way forward for the testing of novel products but also offer a framework for a better understanding of the pathophysiology, pathogenesis, and immunology of C. difficile colonization and infection.</p>","PeriodicalId":10444,"journal":{"name":"Clinical Microbiology and Infection","volume":null,"pages":null},"PeriodicalIF":10.9,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142104977","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pertussis upsurge, age shift and vaccine escape post-COVID-19 caused by ptxP3 macrolide-resistant Bordetella pertussis MT28 clone in China ptxP3大环内酯耐药百日咳杆菌MT28克隆在中国引起的COVID-19后百日咳高发、年龄转移和疫苗逃逸。
IF 10.9 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-08-28 DOI: 10.1016/j.cmi.2024.08.016

Objectives

China has experienced a notable upsurge in pertussis cases post-COVID-19, alongside an age shift to older children, increased vaccine escape, and a notable rise in the prevalence of macrolide-resistant Bordetella pertussis. Here, we present a genomic epidemiological investigation of these events.

Methods

We performed a retrospective observational study using culture-positive B pertussis isolated in Shanghai, China, from 2016 to 2024. We analysed strain and pertussis epidemiology dynamics by integrating whole-genome sequencing of 723 strains with antimicrobial susceptibility, transcriptomic profile, and clinical data. We compared the genome sequences of Shanghai strains with 6450 Chinese and global strains.

Results

From pre-COVID-19 (before December 2019) to post-COVID-19, patients shifted from predominantly infants (90%, 397/442) to a higher proportion of infections in older children (infant: 16%, 132/844), with the share of vaccinated individuals surging from 31% (107/340) to 88% (664/756). The macrolide-resistant Bordetella pertussis prevalence increased from 60% (267/447) to 98% (830/845). The emergence and expansion of a ptxP3-lineage macrolide-resistant clone, MR-MT28, which is uniquely capable of causing substantial infections among older children and vaccinated individuals, was temporally strongly associated with the pertussis upsurge and epidemiological transition. Although MR-MT28 showed increased expression of genes encoding pertussis toxin, it was associated with significantly milder clinical symptoms and a lower hospitalization rate. MR-MT28 likely originated in China around 2016, after acquiring several key mutations, including a novel prn150 allele, and has been detected across multiple regions in China. In addition, 26% (50/195) of MR-MT28 has evolved into predicted Pertactin (PRN)-deficient strains, with an IS481 insertion being the predominant mechanism.

Discussion

: We report that the post-COVID-19 upsurge of pertussis in China is associated with ptxP3-MR-MT28, and provide evidence that pathogen evolution is likely the primary factor driving + pertussis upsurge, age shift, and vaccine escape. MR-MT28 poses a high risk of global spread and warrants global surveillance.
目标:COVID-19后,中国的百日咳病例明显增加,同时出现了向高龄儿童的年龄转移、疫苗逃逸率增加以及耐大环内酯类药物百日咳博德特菌(MRBP)流行率明显上升等现象。在此,我们对这些事件进行了基因组流行病学调查:我们利用 2016 年至 2024 年期间在中国上海分离的培养阳性百日咳杆菌进行了一项回顾性观察研究。我们将 723 株菌株的全基因组测序与抗菌药敏感性、转录组特征和临床数据相结合,分析了菌株和百日咳流行病学动态。我们将上海毒株的基因组序列与 6450 株中国和全球毒株的基因组序列进行了比较:从COVID-19之前(2019年12月之前)到COVID-19之后,患者从以婴儿为主(90%,397/442)转变为大龄儿童感染比例较高(婴儿:16%,132/844),接种疫苗者的比例从31%(107/340)激增至88%(664/756)。MRBP发病率从60%(267/447)上升到98%(830/845)。耐ptxP3系大环内酯类药物的克隆MR-MT28的出现和扩展与百日咳疫情激增和流行病学转变在时间上密切相关。虽然MR-MT28显示百日咳毒素编码基因的表达增加,但其临床症状明显较轻,住院率也较低。MR-MT28很可能在2016年前后起源于中国,在获得包括新型prn150等位基因在内的几个关键突变后,已在中国多个地区被检测到。此外,26%(50/195)的MR-MT28已进化为预测的PRN缺陷株,IS481插入是其主要机制:我们报告说,COVID-19 后中国百日咳疫情的激增与 ptxP3-MR-MT28 有关,并提供证据表明病原体进化可能是导致百日咳疫情激增、年龄转移和疫苗逃逸的主要因素。MR-MT28具有很高的全球传播风险,需要进行全球监测。
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引用次数: 0
Revisiting diagnostics: erythrocyte sedimentation rate and C-reactive protein: it is time to stop the zombie tests. 重新审视诊断:ESR 和 CRP:是时候停止 "僵尸测试 "了。
IF 10.9 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-08-28 DOI: 10.1016/j.cmi.2024.08.017
Brad Spellberg, Travis B Nielsen, Matthew C Phillips, Bassam Ghanem, Tom Boyles, Boris Jegorović, Brent Footer, Jordan K Mah, Anthony Lieu, Jake Scott, Noah Wald-Dickler, Todd C Lee, Emily G McDonald
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引用次数: 0
期刊
Clinical Microbiology and Infection
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