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Developmental Modeling of Childhood Cancers. 儿童癌症的发育模型。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-11-25 DOI: 10.1101/cshperspect.a041711
Kosuke Funato, Viviane Tabar

Growing evidence indicates that childhood cancer is a developmental disease and the oncogenic impact of mutations depends on spatiotemporal developmental contexts. This dependency leads to distinct molecular, genetic, and clinical characteristics across various cancer (sub)types. However, the underlying molecular mechanisms of tumorigenesis are not fully understood, and the development of precision medicine for childhood cancers is still an ongoing effort, partially due to their relative rarity. Therefore, it is crucial to develop and use "developmental models" that replicate both mutations and specific developmental contexts that determine their impact. In this review, we summarize recent advances in the growing field of developmental modeling of childhood cancers, which enhance our understanding of the pathogenic mechanisms and pave the way for the development of new therapeutic approaches.

越来越多的证据表明,儿童癌症是一种发育性疾病,突变的致癌影响取决于时空发育背景。这种依赖性导致各种癌症(亚)类型具有不同的分子、遗传和临床特征。然而,肿瘤发生的潜在分子机制尚未完全明了,儿童癌症精准医疗的开发仍在进行中,部分原因是儿童癌症相对罕见。因此,开发和使用 "发育模型 "至关重要,这种模型既能复制突变,也能复制决定突变影响的特定发育环境。在这篇综述中,我们总结了儿童癌症发育建模领域的最新进展,这些进展增进了我们对致病机制的了解,并为开发新的治疗方法铺平了道路。
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引用次数: 0
Environmental Factors in Type 1 Diabetes. 1 型糖尿病的环境因素。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-11-25 DOI: 10.1101/cshperspect.a041590
Heikki Hyöty, Jutta E Laiho, Suvi M Virtanen

The contribution of environmental factors to the pathogenesis of type 1 diabetes is considered substantial, but their identification has turned out to be challenging. Large prospective studies are crucial for reliable identification of environmental risk and protective factors. However, only few large prospective birth cohort studies have been carried out. Enterovirus infections have shown quite consistent risk association with the initiation of islet autoimmunity (IA) across these studies. Also, certain dietary factors have been consistently associated with IA risk, omega-3 fatty acids inversely, and childhood cow's milk intake directly. However, the mechanisms of these associations are not fully understood, and possible causality has not been confirmed. Clinical trial programs with enterovirus vaccines and antiviral drugs are in progress to evaluate the causality of enterovirus association. The only nutritional primary prevention randomized trial, TRIGR, did not find a difference between weaning to extensively hydrolyzed versus conventional cow's milk-based infant formula.

环境因素对 1 型糖尿病发病机制的影响被认为是巨大的,但要识别这些因素却很困难。大型前瞻性研究对于可靠识别环境风险和保护因素至关重要。然而,目前只有少数大型前瞻性出生队列研究。在这些研究中,肠道病毒感染与胰岛自身免疫(IA)的发生具有相当一致的风险关联。此外,某些饮食因素也与胰岛自身免疫风险有一致的关联,如欧米加-3 脂肪酸与胰岛自身免疫风险成反比,而儿童期牛奶摄入量与胰岛自身免疫风险直接相关。然而,这些关联的机制尚未完全明了,可能的因果关系也尚未得到证实。目前正在进行肠道病毒疫苗和抗病毒药物的临床试验计划,以评估肠道病毒相关性的因果关系。唯一的营养一级预防随机试验 TRIGR 并未发现断奶后食用广泛水解婴儿配方奶粉与常规牛乳婴儿配方奶粉之间存在差异。
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引用次数: 0
Cancer Therapies Targeting Cellular Metabolism. 针对细胞代谢的癌症疗法。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-11-25 DOI: 10.1101/cshperspect.a041657
Benjamin Morris, Alejandro Gutierrez

Cancer is caused by mutations that drive aberrant growth, proliferation, and invasion, thus overriding regulatory mechanisms that normally link these processes to organismal needs and cellular physiology. This imposes demands for the production of energy and biomass and for survival in microenvironments that are often nonphysiologic and nutrient-poor, which are met by rewiring of cellular metabolism. The resultant dependence of tumor cells on altered metabolism can induce sensitivity to specific metabolic perturbations that can be exploited for cancer therapy. Some cancers are caused by mutations that impart a novel function to metabolic enzymes, leading to the production of a tumor-promoting metabolite that is dispensable in normal cells, representing an ideal therapeutic target. Tumors can also exploit metabolic regulation of cellular immunity to evade antitumor immune responses, and deciphering this biology has revealed potential targets for therapeutic intervention. Here, we discuss a number of illustrative examples highlighting the therapeutic potential and the challenges of targeting metabolism for cancer therapy.

癌症是由突变引起的,突变驱动异常生长、增殖和侵袭,从而推翻了通常将这些过程与机体需求和细胞生理联系起来的调节机制。这就对能量和生物量的生产以及在微环境中的生存提出了要求,而这些微环境往往是非生理性和缺乏营养的,需要通过重新安排细胞代谢来满足。因此,肿瘤细胞对新陈代谢改变的依赖可诱发对特定新陈代谢扰动的敏感性,从而被用于癌症治疗。有些癌症是由突变引起的,突变赋予了代谢酶一种新的功能,导致产生一种促进肿瘤生长的代谢物,而这种代谢物在正常细胞中是可有可无的,是理想的治疗靶点。肿瘤还可以利用代谢对细胞免疫的调控来逃避抗肿瘤免疫反应,对这一生物学特性的解读揭示了治疗干预的潜在靶点。在此,我们将讨论一些实例,重点介绍针对新陈代谢进行癌症治疗的潜力和挑战。
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引用次数: 0
Dopamine Cell-Based Replacement Therapies. 基于多巴胺细胞的替代疗法。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-11-05 DOI: 10.1101/cshperspect.a041611
Saeed Kayhanian, Roger A Barker

Parkinson's disease (PD) is a common disorder that has, as part of its core pathology, the loss of the nigral dopaminergic nerve cells that project to the striatum. Replacing this loss with dopaminergic drugs has been the mainstay of therapy in PD for more than 50 years and while offering significant clinical benefit, especially in early-stage disease, leads to side effects over time. A conceptually more effective way to treat this aspect of the PD pathology would be to replace the missing dopaminergic system with grafts of new dopamine cells. This approach has been investigated for nearly 40 years using a variety of different dopamine cell sources. To date, a proof-of-principle has been shown using human fetal dopamine cells in patients with PD, but the more widespread adoption of this approach has been hampered by logistical reasons around tissue supply, the ethics of the cell source, and, most importantly, by the inconsistent results shown across trials, which in some cases have reported worrying side effects. Reasons for all this have been discussed extensively in the literature and one solution may lie in the development of new human stem cell-derived dopamine cells, which are now just entering first in human clinical trials.

帕金森病(PD)是一种常见疾病,其核心病理之一是投射到纹状体的黑质多巴胺能神经细胞丧失。50多年来,多巴胺能药物一直是治疗帕金森氏症的主要药物,虽然能带来显著的临床疗效,尤其是在疾病早期,但随着时间的推移会产生副作用。从概念上讲,治疗帕金森病病理的更有效方法是通过移植新的多巴胺细胞来替代缺失的多巴胺能系统。近40年来,人们一直在利用各种不同的多巴胺细胞来源研究这种方法。迄今为止,使用人类胎儿多巴胺细胞治疗帕金森病患者的原理已经得到证明,但由于组织供应的后勤原因、细胞来源的伦理问题,以及最重要的是,不同试验显示的结果并不一致,有些试验还报告了令人担忧的副作用,这种方法的广泛采用受到了阻碍。文献中已对所有这些原因进行了广泛讨论,其中一个解决方案可能是开发新的人类干细胞衍生多巴胺细胞。
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引用次数: 0
Cancer Metabolism: Historical Landmarks, New Concepts, and Opportunities. 癌症代谢:历史里程碑、新概念和新机遇》(Cancer Metabolism: Historical Landmarks, New Concepts, and Opportunities)。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-11-05 DOI: 10.1101/cshperspect.a041814
Navdeep S Chandel, Karen H Vousden, Ralph J DeBerardinis

Cancer cells undergo changes in metabolism that distinguish them from non-malignant tissue. These may provide a growth advantage by promoting oncogenic signaling and redirecting intermediates to anabolic pathways that provide building blocks for new cellular components. Cancer metabolism is far from uniform, however, and recent work has shed light on its heterogenity within and between tumors. This work is also revealing how cancer metabolism adapts to the tumor microenvironment, as well as ways in which we may capitalize on metabolic changes in cancer cells to create new therapies.

癌细胞的新陈代谢发生变化,使其有别于非恶性组织。这些变化可能会促进致癌信号的传递,并将中间产物重新导向合成代谢途径,从而为新的细胞成分提供构建基块,从而提供生长优势。然而,癌症代谢远非千篇一律,最近的研究揭示了肿瘤内部和肿瘤之间的异质性。这项工作还揭示了癌症代谢如何适应肿瘤微环境,以及我们如何利用癌细胞的代谢变化创造新疗法。
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引用次数: 0
Epitope Hierarchy in Type 1 Diabetes Pathogenesis. 1 型糖尿病发病机制中的表位层次。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-11-05 DOI: 10.1101/cshperspect.a041594
Thomas Delong, Maki Nakayama

Type 1 diabetes (T1D) is an autoimmune disease mediated by T cells destroying insulin-producing β cells. Identifying the antigenic epitopes targeted by autoreactive T cells is crucial for understanding pathogenesis, detecting biomarkers, and developing immunotherapies. This paper covers T-cell epitopes in T1D, focusing on pre-proinsulin and hybrid insulin peptides (HIPs) as major autoantigens. Substantial evidence highlights epitopes in the insulin B-chain and C-peptide as dominant targets for pathogenic CD4 and CD8 T cells infiltrating the islets. HIPs, formed by proinsulin fragments ligated to other peptides, constitute a novel class of epitopes detected in human and mouse islets. In addition, the paper also examines neoepitopes arising from posttranslational modifications, splice variants, and defective ribosomal products. A key challenge is differentiating genuinely pathogenic epitopes driving disease from nonpathogenic mimotopes. Identifying any essential, indispensable epitopes among this array could enable the development of antigen-specific immunotherapies targeting the root causative factors underlying T1D.

1 型糖尿病(T1D)是一种由 T 细胞破坏产生胰岛素的 β 细胞介导的自身免疫性疾病。确定自反应 T 细胞靶向的抗原表位对于了解发病机制、检测生物标记物和开发免疫疗法至关重要。本文介绍了 T1D 中的 T 细胞表位,重点是作为主要自身抗原的前胰岛素和混合胰岛素肽(HIPs)。大量证据表明,胰岛素 B 链和 C 肽中的表位是浸润胰岛的致病性 CD4 和 CD8 T 细胞的主要目标。由原胰岛素片段与其他肽连接而成的HIPs是在人类和小鼠胰岛中检测到的一类新型表位。此外,论文还研究了翻译后修饰、剪接变体和核糖体缺陷产物产生的新表位。一个关键的挑战是区分真正致病的表位与非致病的拟态表位。在这一系列表位中找出任何基本的、不可或缺的表位,就能开发出针对T1D根本致病因素的抗原特异性免疫疗法。
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引用次数: 0
The Complex Roles of Redox and Antioxidant Biology in Cancer. 氧化还原和抗氧化生物学在癌症中的复杂作用。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-11-01 DOI: 10.1101/cshperspect.a041546
Makiko Hayashi, Keito Okazaki, Thales Papgiannakopoulos, Hozumi Motohashi

Redox reactions control fundamental biochemical processes, including energy production, metabolism, respiration, detoxification, and signal transduction. Cancer cells, due to their generally active metabolism for sustained proliferation, produce high levels of reactive oxygen species (ROS) compared to normal cells and are equipped with antioxidant defense systems to counteract the detrimental effects of ROS to maintain redox homeostasis. The KEAP1-NRF2 system plays a major role in sensing and regulating endogenous antioxidant defenses in both normal and cancer cells, creating a bivalent contribution of NRF2 to cancer prevention and therapy. Cancer cells hijack the NRF2-dependent antioxidant program and exploit a very unique metabolism as a trade-off for enhanced antioxidant capacity. This work provides an overview of redox metabolism in cancer cells, highlighting the role of the KEAP1-NRF2 system, selenoproteins, sulfur metabolism, heme/iron metabolism, and antioxidants. Finally, we describe therapeutic approaches that can be leveraged to target redox metabolism in cancer.

氧化还原反应控制着基本的生化过程,包括能量产生、新陈代谢、呼吸、解毒和信号转导。与正常细胞相比,癌细胞因其持续增殖而普遍活跃的新陈代谢会产生高水平的活性氧(ROS),并配备有抗氧化防御系统来抵消 ROS 的有害影响,以维持氧化还原平衡。KEAP1-NRF2 系统在感知和调节正常细胞和癌细胞的内源性抗氧化防御系统方面发挥着重要作用,从而形成了 NRF2 对癌症预防和治疗的双重贡献。癌细胞劫持了依赖 NRF2 的抗氧化程序,并利用一种非常独特的新陈代谢来换取更强的抗氧化能力。这项研究概述了癌细胞中的氧化还原代谢,强调了 KEAP1-NRF2 系统、硒蛋白、硫代谢、血红素/铁代谢和抗氧化剂的作用。最后,我们介绍了针对癌症氧化还原代谢的治疗方法。
{"title":"The Complex Roles of Redox and Antioxidant Biology in Cancer.","authors":"Makiko Hayashi, Keito Okazaki, Thales Papgiannakopoulos, Hozumi Motohashi","doi":"10.1101/cshperspect.a041546","DOIUrl":"10.1101/cshperspect.a041546","url":null,"abstract":"<p><p>Redox reactions control fundamental biochemical processes, including energy production, metabolism, respiration, detoxification, and signal transduction. Cancer cells, due to their generally active metabolism for sustained proliferation, produce high levels of reactive oxygen species (ROS) compared to normal cells and are equipped with antioxidant defense systems to counteract the detrimental effects of ROS to maintain redox homeostasis. The KEAP1-NRF2 system plays a major role in sensing and regulating endogenous antioxidant defenses in both normal and cancer cells, creating a bivalent contribution of NRF2 to cancer prevention and therapy. Cancer cells hijack the NRF2-dependent antioxidant program and exploit a very unique metabolism as a trade-off for enhanced antioxidant capacity. This work provides an overview of redox metabolism in cancer cells, highlighting the role of the KEAP1-NRF2 system, selenoproteins, sulfur metabolism, heme/iron metabolism, and antioxidants. Finally, we describe therapeutic approaches that can be leveraged to target redox metabolism in cancer.</p>","PeriodicalId":10452,"journal":{"name":"Cold Spring Harbor perspectives in medicine","volume":" ","pages":""},"PeriodicalIF":7.8,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11529857/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141075736","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Restoration of Rod-Derived Metabolic and Redox Signaling to Prevent Blindness. 恢复杆衍生代谢和氧化还原信号以预防失明。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-11-01 DOI: 10.1101/cshperspect.a041284
Emmanuelle Clérin, Najate Aït-Ali, José-Alain Sahel, Thierry Léveillard

Vision is initiated by capturing photons in highly specialized sensory cilia known as the photoreceptor outer segment. Because of its lipid and protein composition, the outer segments are prone to photo-oxidation, requiring photoreceptors to have robust antioxidant defenses and high metabolic synthesis rates to regenerate the outer segments every 10 days. Both processes required high levels of glucose uptake and utilization. Retinitis pigmentosa is a prevalent form of inherited retinal degeneration characterized by initial loss of low-light vision caused by the death of rod photoreceptors. In this disease, rods die as a direct effect of an inherited mutation. Following the loss of rods, cones eventually degenerate, resulting in complete blindness. The progression of vision loss in retinitis pigmentosa suggested that rod photoreceptors were necessary to maintain healthy cones. We identified a protein secreted by rods that functions to promote cone survival, and we named it rod-derived cone viability factor (RdCVF). RdCVF is encoded by an alternative splice product of the nucleoredoxin-like 1 (NXNL1) gene, and RdCVF was found to accelerate the uptake of glucose by cones. Without RdCVF, cones eventually die because of compromised glucose uptake and utilization. The NXNL1 gene also encodes for the thioredoxin RdCVFL, which reduces cysteines in photoreceptor proteins that are oxidized, providing a defense against radical oxygen species. We will review here the main steps of discovering this novel intercellular signaling currently under translation as a broad-spectrum treatment for retinitis pigmentosa.

视觉是通过在被称为光感受器外段的高度专业化的感觉纤毛中捕获光子来启动的。由于其脂质和蛋白质组成,外层节段容易发生光氧化,需要光感受器具有强大的抗氧化防御能力和高代谢合成率,才能每10天再生一次外层节段。这两个过程都需要高水平的葡萄糖摄取和利用。色素性视网膜炎是一种常见的遗传性视网膜变性,其特征是由杆状光感受器死亡引起的初始微光视力丧失。在这种疾病中,杆状病毒的死亡是遗传突变的直接影响。失去视杆后,视锥最终退化,导致完全失明。色素性视网膜炎视力下降的进展表明,杆状光感受器是维持视锥健康所必需的。我们鉴定了一种由杆状细胞分泌的蛋白质,该蛋白质具有促进锥体存活的功能,并将其命名为杆状细胞衍生的锥体活力因子(RdCVF)。RdCVF由核氧还蛋白样1(NXNL1)基因的另一种剪接产物编码,发现RdCVF可加速视锥对葡萄糖的摄取。如果没有RdCVF,视锥细胞最终会因葡萄糖摄取和利用受损而死亡。NXNL1基因还编码硫氧还蛋白RdCVFL,它减少被氧化的光感受器蛋白中的半胱氨酸,提供对自由基氧物种的防御。我们将在这里回顾发现这种新的细胞间信号传导的主要步骤,目前正被翻译为色素性视网膜炎的广谱治疗方法。
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引用次数: 0
α-Synuclein in Parkinson's Disease: 12 Years Later. 帕金森病中的α-突触核蛋白:12 年之后
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-11-01 DOI: 10.1101/cshperspect.a041645
Kostas Vekrellis, Evangelia Emmanouilidou, Maria Xilouri, Leonidas Stefanis

α-Synuclein (AS) is a small presynaptic protein that is genetically, biochemically, and neuropathologically linked to Parkinson's disease (PD) and related synucleinopathies. We present here a review of the topic of this relationship, focusing on more recent knowledge. In particular, we review the genetic evidence linking AS to familial and sporadic PD, including a number of recently identified point mutations in the SNCA gene. We briefly go over the relevant neuropathological findings, stressing the evidence indicating a correlation between aberrant AS deposition and nervous system dysfunction. We analyze the structural characteristics of the protein, in relation to both its physiologic and pathological conformations, with particular emphasis on posttranslational modifications, aggregation properties, and secreted forms. We review the interrelationship of AS with various cellular compartments and functions, with particular focus on the synapse and protein degradation systems. We finally go over the recent exciting data indicating that AS can provide the basis for novel robust biomarkers in the field of synucleinopathies, while at the same time results from the first clinical trials specifically targeting AS are being reported.

α-突触核蛋白(AS)是一种突触前小蛋白,在遗传学、生物化学和神经病理学上与帕金森病(PD)和相关的突触核蛋白病有关。我们在此回顾了这一关系,重点是最新的知识。特别是,我们回顾了将强直性脊柱炎与家族性和散发性帕金森病联系起来的遗传学证据,包括最近在 SNCA 基因中发现的一些点突变。我们简要回顾了相关的神经病理学发现,强调有证据表明 AS 的异常沉积与神经系统功能障碍之间存在关联。我们分析了该蛋白质的结构特征,包括其生理和病理构象,特别强调了翻译后修饰、聚集特性和分泌形式。我们回顾了 AS 与各种细胞区系和功能的相互关系,尤其关注突触和蛋白质降解系统。最后,我们将介绍最近的一些令人兴奋的数据,这些数据表明 AS 可为突触核蛋白病领域的新型稳健生物标记物奠定基础,与此同时,首批专门针对 AS 的临床试验结果也正在报告中。
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引用次数: 0
Advancing Animal Models of Human Type 1 Diabetes. 推动人类 1 型糖尿病动物模型的发展。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-10-01 DOI: 10.1101/cshperspect.a041587
David V Serreze, Jennifer R Dwyer, Jeremy J Racine

Multiple rodent models have been developed to study the basis of type 1 diabetes (T1D). However, nonobese diabetic (NOD) mice and derivative strains still provide the gold standard for dissecting the basis of the autoimmune responses underlying T1D. Here, we review the developmental origins of NOD mice, and how they and derivative strains have been used over the past several decades to dissect the genetic and immunopathogenic basis of T1D. Also discussed are ways in which the immunopathogenic basis of T1D in NOD mice and humans are similar or differ. Additionally reviewed are efforts to "humanize" NOD mice and derivative strains to provide improved models to study autoimmune responses contributing to T1D in human patients.

目前已开发出多种啮齿动物模型来研究 1 型糖尿病(T1D)的发病基础,但非肥胖糖尿病(NOD)小鼠及其衍生品系仍是剖析 T1D 自身免疫反应基础的黄金标准。在此,我们回顾了 NOD 小鼠的发育起源,以及在过去几十年中,它们及其衍生品系是如何被用于剖析 T1D 的遗传和免疫致病基础的。本文还讨论了 NOD 小鼠和人类 T1D 免疫致病基础的相似或不同之处。此外,还回顾了为 "人性化 "NOD 小鼠及其衍生品系所做的努力,以便提供更好的模型来研究导致人类患者 T1D 的自身免疫反应。
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引用次数: 0
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