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Rodent Models of Retinal Degeneration: From Purified Cells in Culture to Living Animals. 视网膜退化的啮齿类动物模型:从培养的纯化细胞到活体动物。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-10-01 DOI: 10.1101/cshperspect.a041311
Valérie Fradot, Sébastien Augustin, Valérie Fontaine, Katia Marazova, Xavier Guillonneau, José A Sahel, Serge Picaud

Rodent models of retinal degeneration are essential for the development of therapeutic strategies. In addition to living animal models, we here also discuss models based on rodent cell cultures, such as purified retinal ganglion cells and retinal explants. These ex vivo models extend the possibilities for investigating pathological mechanisms and assessing the neuroprotective effect of pharmacological agents by eliminating questions on drug pharmacokinetics and bioavailability. The number of living rodent models has greatly increased with the possibilities to achieve transgenic modifications in animals for knocking in and out genes and mutations. The Cre-lox system has further enabled investigators to target specific genes or mutations in specific cells at specific stages. However, chemically or physically induced models can provide alternatives to such targeted gene modifications. The increased diversity of rodent models has widened our possibility to address most ocular pathologies for providing initial proof of concept of innovative therapeutic strategies.

视网膜变性的啮齿动物模型对于制定治疗策略至关重要。除了活体动物模型外,我们在这里还讨论了基于啮齿动物细胞培养的模型,如纯化的视网膜神经节细胞和视网膜外植体。这些离体模型通过消除药物药代动力学和生物利用度方面的问题,扩展了研究病理机制和评估药理学药物的神经保护作用的可能性。活体啮齿动物模型的数量大大增加,有可能在动物身上实现转基因修饰,以敲除基因和突变。Cre-lox系统进一步使研究人员能够在特定阶段靶向特定细胞中的特定基因或突变。然而,化学或物理诱导的模型可以提供这种靶向基因修饰的替代方案。啮齿动物模型的多样性增加了我们解决大多数眼部病理的可能性,为创新治疗策略的概念提供了初步的证明。
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引用次数: 0
Understanding the Warburg Effect in Cancer. 了解癌症中的沃伯格效应
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-16 DOI: 10.1101/cshperspect.a041532
Zhaoqi Li, Muhammad Bin Munim, Daniel A Sharygin, Brooke J Bevis, Matthew G Vander Heiden

Rapidly proliferating cells, including cancer cells, adapt metabolism to meet the increased energetic and biosynthetic demands of cell growth and division. Many rapidly proliferating cells exhibit increased glucose consumption and fermentation regardless of oxygen availability, a phenotype termed aerobic glycolysis or the Warburg effect in cancer. Several explanations for why cells engage in aerobic glycolysis and how it supports proliferation have been proposed, but none can fully explain all conditions and data where aerobic glycolysis is observed. Nevertheless, there is convincing evidence that the Warburg effect is important for the proliferation of many cancers, and that inhibiting either glucose uptake or fermentation can impair tumor growth. Here, we discuss what is known about metabolism associated with aerobic glycolysis and the evidence supporting various explanations for why aerobic glycolysis may be important in cancer and other contexts.

包括癌细胞在内的快速增殖细胞会调整新陈代谢,以满足细胞生长和分裂对能量和生物合成的更高需求。许多快速增殖的细胞表现出更多的葡萄糖消耗和发酵,而不受氧气供应的影响,这种表型被称为有氧糖酵解或癌症中的沃伯格效应。对于细胞为何进行有氧糖酵解以及有氧糖酵解如何支持细胞增殖,人们提出了几种解释,但没有一种解释能完全解释观察到有氧糖酵解的所有条件和数据。不过,有令人信服的证据表明,沃伯格效应对许多癌症的增殖非常重要,抑制葡萄糖摄取或发酵都会影响肿瘤生长。在此,我们将讨论与有氧糖酵解相关的新陈代谢的已知情况,以及支持有氧糖酵解在癌症和其他情况下可能具有重要作用的各种解释的证据。
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引用次数: 0
Ovarian Clear Cell Carcinoma: An Endometriosis-Associated Cancer with Therapeutic Challenges. 卵巢透明细胞癌:子宫内膜异位症相关癌症的治疗难题。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-16 DOI: 10.1101/cshperspect.a041315
Ruby Yun-Ju Huang, Jimmy Jin-Che Lin

Ovarian clear cell carcinoma (OCCC) is a histological subtype of epithelial ovarian cancer with distinct pathological features, molecular profiles, and biological functions. OCCC has high incidence rates in East Asia compared to the Western hemisphere and Europe and is associated with endometriosis. With its relative resistance to conventional treatment regimens and the worst stage-adjusted prognosis among ovarian cancer subtypes, there is an urgent need to optimize therapeutic options and to improve patient outcomes. To achieve this goal, better patient stratification strategies are required. These strategies could derive from comprehensive and in-depth multidimensional analysis of tumor heterogeneity. Understanding intertumor heterogeneity could assist us in stratifying OCCC patients based on features that are prognostic or predictive. Recent genomic, epigenomic, and transcriptomic profiling analyses allow us to provide an integrative perspective on the diverse heterogeneity in OCCC that could pave the way for novel translational research and clinical development in the future.

卵巢透明细胞癌(OCCC)是上皮性卵巢癌的一种组织学亚型,具有不同的病理特征、分子特征和生物学功能。与西半球和欧洲相比,卵巢透明细胞癌在东亚的发病率较高,且与子宫内膜异位症有关。卵巢癌亚型对常规治疗方案相对耐受,经分期调整后的预后最差,因此迫切需要优化治疗方案,改善患者预后。为实现这一目标,需要更好的患者分层策略。对肿瘤异质性进行全面、深入的多维分析可有助于制定这些策略。了解肿瘤间的异质性有助于我们根据预后或预测特征对 OCCC 患者进行分层。最近的基因组学、表观基因组学和转录组学分析使我们能够从综合的角度来看待 OCCC 中的各种异质性,这将为未来的新型转化研究和临床开发铺平道路。
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引用次数: 0
Cancer Metabolism: Aspirations for the Coming Decade. 癌症代谢:未来十年的愿望
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-16 DOI: 10.1101/cshperspect.a041555
Ralph J DeBerardinis, Karen H Vousden, Navdeep S Chandel

Fueled by technological and conceptual advancements over the past two decades, research in cancer metabolism has begun to answer questions dating back to the time of Otto Warburg. But, as with most fields, new discoveries lead to new questions. This review outlines the emerging challenges that we predict will drive the next few decades of cancer metabolism research. These include developing a more realistic understanding of how metabolic activities are compartmentalized within cells, tissues, and organs; how metabolic preferences in tumors evolve during cancer progression from nascent, premalignant lesions to advanced, metastatic disease; and, most importantly, how we can best translate basic observations from preclinical models into novel therapies that benefit patients with cancer. With modern tools and an incredible amount of talent focusing on these problems, the upcoming decades should bring transformative discoveries.

在过去二十年技术和概念进步的推动下,癌症代谢研究已开始回答奥托-沃伯格(Otto Warburg)时代就提出的问题。但是,与大多数领域一样,新发现也会带来新问题。本综述概述了新出现的挑战,我们预测这些挑战将推动未来几十年的癌症代谢研究。这些挑战包括:如何更真实地了解细胞、组织和器官内的代谢活动是如何分区的;在癌症从新生、恶性前病变到晚期、转移性疾病的发展过程中,肿瘤中的代谢偏好是如何演变的;以及最重要的是,我们如何才能最好地将临床前模型的基本观察结果转化为造福癌症患者的新型疗法。有了现代工具和大量专注于这些问题的人才,未来几十年应该会有变革性的发现。
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引用次数: 0
Rebalancing the Immune System to Treat Type 1 Diabetes. 重新平衡免疫系统,治疗 1 型糖尿病。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-16 DOI: 10.1101/cshperspect.a041599
Yannick D Muller, Patrick Ho, Jeffrey A Bluestone, Qizhi Tang

In type 1 diabetes (T1D), the immune system mistakenly attacks the pancreatic islet β cells resulting in the loss of insulin secretion. Insulin-replacement therapy developed more than a century ago provided means to manage the symptoms of diabetes without addressing the root cause of the disease-the faulty immune system. A healthy immune system has built-in mechanisms to limit unwanted, excessive immune activation and prevents damages to self-tissues. These immune self-tolerance mechanisms are often impaired in autoimmune patients including those with T1Ds. Understanding how immune self-tolerance is broken in patients with T1D can inform the design of new curative therapies that correct the immune defects. In this paper, we will summarize the mechanisms of immune tolerance, review their relevance to T1Ds, and discuss novel therapeutic approaches to rebalance the immune system for the treatment of T1Ds.

在 1 型糖尿病(T1D)患者中,免疫系统会错误地攻击胰岛 β 细胞,导致胰岛素分泌丧失。一个多世纪前开发的胰岛素替代疗法只提供了控制糖尿病症状的手段,却没有解决疾病的根本原因--有缺陷的免疫系统。健康的免疫系统有内在机制限制不必要的、过度的免疫激活,并防止对自身组织造成损害。包括 T1D 患者在内的自身免疫性疾病患者的这些免疫自我耐受机制通常会受到损害。了解 T1D 患者的免疫自我耐受是如何被破坏的,可以为设计纠正免疫缺陷的新疗法提供参考。在本文中,我们将总结免疫耐受的机制,回顾它们与 T1D 的相关性,并讨论重新平衡免疫系统以治疗 T1D 的新型治疗方法。
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引用次数: 0
Technologies for Decoding Cancer Metabolism with Spatial Resolution. 以空间分辨率解码癌症代谢的技术。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-16 DOI: 10.1101/cshperspect.a041553
Walter W Chen, Michael E Pacold, David M Sabatini, Naama Kanarek

It is increasingly appreciated that cancer cells adapt their metabolic pathways to support rapid growth and proliferation as well as survival, often even under the poor nutrient conditions that characterize some tumors. Cancer cells can also rewire their metabolism to circumvent chemotherapeutics that inhibit core metabolic pathways, such as nucleotide synthesis. A critical approach to the study of cancer metabolism is metabolite profiling (metabolomics), the set of technologies, usually based on mass spectrometry, that allow for the detection and quantification of metabolites in cancer cells and their environments. Metabolomics is a burgeoning field, driven by technological innovations in mass spectrometers, as well as novel approaches to isolate cells, subcellular compartments, and rare fluids, such as the interstitial fluid of tumors. Here, we discuss three emerging metabolomic technologies: spatial metabolomics, single-cell metabolomics, and organellar metabolomics. The use of these technologies along with more established profiling methods, like single-cell transcriptomics and proteomics, is likely to underlie new discoveries and questions in cancer research.

人们越来越认识到,癌细胞会调整其代谢途径,以支持快速生长、增殖和存活,即使在某些肿瘤所特有的恶劣营养条件下也是如此。癌细胞还能重新构建新陈代谢,以规避抑制核苷酸合成等核心代谢途径的化疗药物。研究癌症代谢的一个重要方法是代谢组学(metabolomics),这是一套通常以质谱为基础的技术,可以检测和量化癌细胞及其环境中的代谢物。代谢组学是一个蓬勃发展的领域,质谱仪的技术创新以及分离细胞、亚细胞区和罕见体液(如肿瘤间质)的新方法推动了这一领域的发展。在此,我们将讨论三种新兴的代谢组学技术:空间代谢组学、单细胞代谢组学和细胞器代谢组学。这些技术与更成熟的分析方法(如单细胞转录组学和蛋白质组学)一起使用,很可能会为癌症研究带来新的发现和问题。
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引用次数: 0
The Teplizumab Saga: The Challenge of Not Getting Lost in Clinical Translation. 特普利珠单抗传奇:不迷失在临床转化中的挑战。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-16 DOI: 10.1101/cshperspect.a041600
Lucienne Chatenoud, Kevan C Herold, Jean-François Bach, Jeffrey A Bluestone

In November 2022, teplizumab became the first drug approved to delay the course of any autoimmune disease and to change the course of type 1 diabetes (T1D) since the discovery of insulin. The path to its approval took more than 30 years with both successes and failures along the way that would have normally led to its abandonment in other circumstances. Development of the drug was based on studies in preclinical models and parallels efforts in transplantation. From a series of innovative adaptations in response to issues related to adverse events and immunogenicity, humanized Fc receptors (FcR) nonbinding antibodies were developed with improved clinical outcomes and safety as well as new mechanisms. Importantly, as a result of these developments, teplizumab has been able to achieve efficacy over extended periods of time without global immune suppression. The approval of teplizumab represents a significant first step toward achieving escape from T1D and, in the future, reversal of the disease.

2022 年 11 月,替普利珠单抗(teplizumab)成为自胰岛素发现以来首个获批用于延缓自身免疫性疾病病程和改变 1 型糖尿病(T1D)病程的药物。该药的获批之路历时 30 多年,一路上有成功也有失败,在其他情况下,这些失败通常会导致该药被放弃。该药物的开发以临床前模型研究为基础,与移植方面的努力相似。针对与不良反应和免疫原性有关的问题进行了一系列创新性调整,开发出了人源化 Fc 受体(FcR)非结合抗体,改善了临床效果和安全性,并建立了新的机制。重要的是,由于取得了这些进展,替普利珠单抗能够在没有全面免疫抑制的情况下长期发挥疗效。teplizumab 的获批标志着向摆脱 T1D 以及将来逆转该疾病迈出了重要的第一步。
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引用次数: 0
Autoantigen-Specific Immunotherapies for the Prevention and Treatment of Type 1 Diabetes. 预防和治疗 1 型糖尿病的自身抗原特异性免疫疗法。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-16 DOI: 10.1101/cshperspect.a041598
Mark Peakman, Pere Santamaria

Type 1 diabetes (T1D) is driven by an immunologically complex, diverse, and self-sustaining immune response directed against tissue autoantigens, leading to loss or dysfunction of β cells. To date, the single approved immune intervention in T1D is based on a strategy that is similar to that used in other related autoimmune diseases, namely, the attenuation of immune cell activation. As a next-generation approach that is more focused on underlying mechanisms of loss of tolerance, antigen-specific immunotherapy is designed to establish or restore bystander immunoregulation in a highly tissue- and target-specific fashion. Here, we describe the basis for this alternative approach, which could also have potential for complementarity if used in combination with more conventional immune modulators, and highlight recent advances, knowledge gaps, and next steps in clinical development.

1 型糖尿病(T1D)是由针对组织自身抗原的复杂、多样和自我维持的免疫反应驱动的,这种免疫反应会导致 β 细胞丢失或功能障碍。迄今为止,唯一获得批准的治疗 T1D 的免疫干预措施是基于一种与其他相关自身免疫性疾病类似的策略,即抑制免疫细胞的活化。抗原特异性免疫疗法是一种更注重耐受性丧失潜在机制的下一代方法,旨在以高度组织特异性和靶点特异性的方式建立或恢复旁观者免疫调节。在此,我们将介绍这种替代方法的基础,如果与更传统的免疫调节剂结合使用,这种方法还可能具有互补性,并重点介绍临床开发的最新进展、知识差距和下一步计划。
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引用次数: 0
Imaging Approaches in Cancer Biology. 癌症生物学中的成像方法。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-03 DOI: 10.1101/cshperspect.a041349
Nirakar Rajbhandari, Emily Diaz, Marcie Kritzik, Tannishtha Reya

A majority of cancer research is focused on defining the cellular and molecular basis of cancer cells and the signals that control oncogenic transformation; as a consequence, we know very little about the dynamic behavior of cancer cells in vivo. To begin to view and understand the mechanisms and interactions that control cancer initiation, growth, and metastatic progression and how these processes are influenced by the microenvironment and the signals derived from it, it is essential to develop strategies that allow imaging of the cancer cells in the context of the living microenvironment. Here, we discuss emerging work designed to visualize how cancer cells function within the microenvironment to discover how these interactions act coordinately to enable aberrant growth and to understand how they could be targeted to design new approaches to intercept the disease.

大部分癌症研究都集中在确定癌细胞的细胞和分子基础以及控制致癌转化的信号上;因此,我们对癌细胞在体内的动态行为知之甚少。要开始观察和了解控制癌症发生、生长和转移的机制和相互作用,以及这些过程如何受到微环境和来自微环境的信号的影响,就必须开发能在活体微环境中对癌细胞进行成像的策略。在此,我们将讨论新出现的旨在观察癌细胞如何在微环境中发挥作用的工作,以发现这些相互作用如何协调地促成异常生长,并了解如何针对这些相互作用设计新的方法来阻断疾病。
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引用次数: 0
History of Finding Genes and Mutations Causing Inherited Retinal Diseases. 发现导致遗传性视网膜疾病的基因和突变的历史。
IF 7.8 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-09-03 DOI: 10.1101/cshperspect.a041287
Stephen P Daiger, Lori S Sullivan, Elizabeth L Cadena, Sara J Bowne

This is a brief history of the work by many investigators throughout the world to find genes and mutations causing inherited retinal diseases (IRDs). It largely covers 40 years, from the late-1980s through today. Perhaps the best reason to study history is to better understand the present. The "present" for IRDs is exceptionally complex. Mutations in hundreds of genes are known to cause IRDs; tens of thousands of disease-causing mutations have been reported; clinical consequences are highly variable, even within the same family; and genetic testing, counseling, and clinical care are highly advanced but technically challenging. The aim of this review is to account for how we have come to know and understand, at least partly, this complexity.

这是世界各地许多研究人员寻找导致遗传性视网膜疾病(IRD)的基因和突变的工作简史。它主要涵盖了从20世纪80年代末到今天的40年。也许研究历史的最好理由是更好地了解当下。IRD的“礼物”异常复杂。已知数百个基因的突变会导致IRD;已经报道了数以万计的致病突变;临床后果是高度可变的,即使在同一家族中也是如此;基因检测、咨询和临床护理非常先进,但在技术上具有挑战性。这篇综述的目的是说明我们是如何了解和理解这种复杂性的,至少在一定程度上是这样。
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引用次数: 0
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