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Surgical Phase Recognition for different hospitals 不同医院的手术阶段识别
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1079
Eric L. Wisotzky, Sophie Beckmann, Peter Eisert, Lasse Renz-Kiefel, Anna Hilsmann, Sebastian Lünse, René Mantke
Abstract Surgical phase recognition is an important aspect of surgical workflow analysis, as it allows an automatic analysis of the performance and efficiency of surgical procedures. A big challenge for training a neural network for surgical phase recognition is the availability of training data and the large (visual) variability in procedures of different surgeons. Hence, a network must be able to generalize to new data. In this paper, we present an adaptation of a Temporal Convolutional Network for surgical phase recognition in order to ensure the generalization of the network to new scenes with different conditions on the example of cholecystectomy. We used publicly available datasets of 104 surgeries from four different centers for training. The results showed that the network was able to generalize to new scenes and we obtained recognition results with accuracy up to 82% on our own six captured surgeries, performed in a different hospital. This performance is similar for test data from the hospitals of the training data, suggesting that the network can well generalize to new surgical rooms and surgeons. The findings have important implications for the development of automated surgical decision support systems that can be applied in a variety of real-world surgical settings.
手术阶段识别是手术工作流程分析的一个重要方面,因为它可以自动分析手术过程的性能和效率。训练用于手术阶段识别的神经网络的一大挑战是训练数据的可用性以及不同外科医生的手术过程中的巨大(视觉)差异。因此,网络必须能够泛化到新的数据。本文以胆囊切除术为例,提出了一种适应于手术阶段识别的时间卷积网络,以保证网络对不同条件下的新场景的泛化。我们使用了来自四个不同中心的104个手术的公开数据集进行培训。结果表明,该网络能够推广到新的场景,我们在不同医院进行的6次手术中获得了准确率高达82%的识别结果。这一性能与训练数据的医院测试数据相似,表明该网络可以很好地泛化到新的手术室和外科医生。该研究结果对自动化手术决策支持系统的发展具有重要意义,该系统可应用于各种现实世界的手术环境。
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引用次数: 0
Development of a current controlled stimulation setup for investigating the effect of electrical currents on implant infections caused by biofilms 开发一种电流控制刺激装置,用于研究电流对由生物膜引起的植入物感染的影响
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1028
Maxim Fenko, Constantin Wiesener, Rima Fanaei Pirlar, Andrej Trampuz, Markus Valtin, Thomas Schauer
Abstract Introduction: Biofilms are bacterial communities that transform into a state enclosed in an extracellular polymeric substance, which makes them less susceptible to antibiotics. Those bacterial formations often develop on metal implants and cause chronic infections. Due to the severely reduced impact of antibiotics against biofilms, the effect of electric stimulation (on its own and in combination with antimicrobials) needs to be further observed, as available studies indicate a positive effect. Methods: Therefore, this work examined the development of a six-channel current-controlled stimulation setup, which enables further in vitro research on the effects of electric stimulation on biofilms. The setup controls the desired stimulation current through the load to counteract electrochemical processes, which constantly change its resistive and capacitive properties. Results: Each channel of the stimulator is able to operate within an amplitude range of 50 A to 1 mA, a frequency range of 0 Hz to 1 kHz, and a pulse width range of 50 s to 1 ms. The current control provides a sufficient rise time of 3.3 s for three different stimulation modes: constant direct current (DC), pulsed DC, and biphasic-pulsed alternating current (AC). Furthermore, a graphical user interface enables the user to regulate and observe the stimulation on a computer to which the stimulator device is connected. Conclusion: The achieved variety of stimulation parameters in one device makes it possible to analyze the effect of different stimulation paradigms on biofilms and therefore enables more in vitro research which is inevitable to develop a sufficient treatment for patients with biofilm-infected implants.
生物膜是一种细菌群落,它们转化成一种被细胞外聚合物质包围的状态,这使得它们对抗生素不那么敏感。这些细菌通常在金属植入物上形成,并导致慢性感染。由于抗生素对生物膜的影响严重降低,电刺激(单独使用和与抗菌素联合使用)的效果需要进一步观察,因为现有的研究表明了积极的效果。方法:因此,本工作研究了六通道电流控制刺激装置的发展,这使得进一步的体外研究电刺激对生物膜的影响成为可能。该装置通过负载控制所需的刺激电流,以抵消不断改变其电阻和电容特性的电化学过程。结果:刺激器的每个通道能够在50 A至1 mA的幅度范围内工作,频率范围为0 Hz至1 kHz,脉冲宽度范围为50 s至1 ms。电流控制为三种不同的刺激模式提供了3.3 s的上升时间:恒定直流电(DC),脉冲直流电(DC)和双相脉冲交流电(AC)。此外,图形用户界面使用户能够在连接刺激器装置的计算机上调节和观察刺激。结论:在同一设备上实现多种刺激参数,可以分析不同刺激模式对生物膜的影响,从而进行更多的体外研究,为生物膜感染患者提供充分的治疗是必然的。
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引用次数: 0
Quantitative ECG based emotion state recognition using Detrended Fluctuation Analysis 基于非趋势波动分析的定量心电情绪状态识别
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1176
Meena Anandan, Pandiyarasan Veluswamy, Rohini Palanisamy
Abstract Wearable emotion recogniton system is essential in identifying mental health disorders by early detection and continuous monitoring of human emotions to provide proper treatment care. Electrocardiogram (ECG) signals can be used for emotion recognition for its noninvasiveness and easy usability. In this study, Detrended Fluctuation Analysis (DFA) and Extreme Gradient Boost (XG Boost) classifier is used to classify the scary and boring emotion from the ECG signals. For this, ECG signal corresponding to these emotions are obtained from public database. The preprocessing is performed by adding the video IDs to the signal and annotating it. This preprocessed signal is subjected to DFA to understand the power-law correlations and similarity property. Further, from the power law correlations, features namely Hurst exponent and DFA intercept are extracted. These features are subjected to XG Boost classifier to differentiate the two emotions. Results shows that the log-log plot of power law correlation is linear in nature which indicates that ECG signals of both the emotions have long range correlations and self-similarity property. The extracted scaling exponent indicates variations between scary and boring with a mean and standard deviation of 0.81±0.13 and 0.68±0.07 respectively. Similarly, DFA intercept provides mean and standard deviation for scary and boring 0.15±0.06 and 0.17±0.07 respectively, showing less variability in the ECG signal. XG Boost classifier gives accuracy of 80.5% for classifying scary and boring emotion. Thus, the proposed approach can be used for wearable emotion recognition system to differentiate scary and boring emotion.
可穿戴情绪识别系统是通过早期发现和持续监测人类情绪来识别精神健康障碍,从而提供适当治疗护理的关键。心电图信号具有无创性和易用性等特点,可用于情绪识别。本研究采用去趋势波动分析(DFA)和极限梯度提升(XG Boost)分类器对心电信号中的恐怖情绪和无聊情绪进行分类。为此,从公共数据库中获取与这些情绪相对应的心电信号。预处理通过将视频id添加到信号中并对其进行注释来完成。对预处理后的信号进行DFA分析,以了解幂律相关性和相似特性。进一步,从幂律相关性中提取特征,即Hurst指数和DFA截距。这些特征被置于XG Boost分类器中以区分两种情绪。结果表明,幂律相关的对数对数图本质上是线性的,表明两种情绪的心电信号具有较长的相关性和自相似性。提取的尺度指数表示吓人和无聊之间的差异,均值和标准差分别为0.81±0.13和0.68±0.07。同样,DFA截距对恐怖和无聊的平均值和标准差分别为0.15±0.06和0.17±0.07,心电信号变异性较小。XG Boost分类器对恐怖和无聊情绪的分类准确率为80.5%。因此,该方法可用于可穿戴式情绪识别系统,以区分恐怖和无聊的情绪。
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引用次数: 0
PCB Coil Enables In Situ Calibration of Magnetoelectric Sensor Systems PCB线圈实现磁电传感器系统的原位校准
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1142
Henrik Wolframm, Johannes Hoffmann, Ralf Burgardt, Eric Elzenheimer, Gerhard Schmidt, Michael Höft
Abstract Accurate calibration is key for any reliable sensor system. Magnetoelectric (ME) sensors, in particular, are influenced in their operating point by external parameters such as the Earth’s magnetic field or the ambient temperature. In this paper, we introduce a new planar coil design for the generation of a magnetic test field within the plane of the ME sensor. Furthermore, we implemented a method for measuring the sensor behaviour using a short-term magnetic noise signal. The combination of the printed circuit board (PCB) coil and the accelerated sensor characterization method allows the sensor system to be calibrated at the measurement site (in situ) without the need for laboratory equipment. We can show that the presented method for calibration achieves high-quality results in 10 seconds for a sensor affected by external interference fields.
准确的标定是传感器系统可靠运行的关键。特别是磁电(ME)传感器,其工作点受到地球磁场或环境温度等外部参数的影响。在本文中,我们介绍了一种新的平面线圈设计,用于在ME传感器的平面内产生磁场。此外,我们实现了一种使用短期磁噪声信号测量传感器行为的方法。印刷电路板(PCB)线圈和加速传感器表征方法的结合允许传感器系统在测量现场(原位)进行校准,而不需要实验室设备。我们可以证明,对于受外部干扰场影响的传感器,所提出的校准方法在10秒内获得了高质量的结果。
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引用次数: 0
Decoupling the effects of varying amplitude and frequency in the electrical stimulation of optic nerve fibers 视神经纤维电刺激中不同振幅和频率的解耦效应
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1049
Simone Romeni, Gabriele Marino, Luca Pierantoni, Silvestro Micera
Abstract Introduction. Computational models of optic nerve stimulation can allow to estimate the neural response of optic nerve fibers electrical stimulation and thus can be exploited to tune stimulation parameters to obtain a specific target perception. In principle, such tuning should be performed in an automatic way, so that the chosen stimulation parameters minimize some given cost function related to the quality of resulting the visual perception, but the use of such automatic methods is still under study and no satisfactory solution is available yet. In the absence of automatic methods, stimulation parameters are customarily set via manual tuning, which can be extremely time-consuming if performed in a non-principled way. Methods. We build biophysically-accurate hybrid models of monopolar and bipolar electrical stimulation of optic nerve fibers to study how the fibers firing rates depend upon the stimulation parameters. Results. In the case of monopolar sinusoidal stimulation of optic nerve fibers, we show that the amplitude of stimulation controls the size of the recruited cluster of fibers, and that the frequency controls their firing rate, independently. Instead, for bipolar stimulation, we show that when cross-talk is non negligible it is very difficult to obtain rules of thumb linking the firing rate of target fibers to stimulation parameters. Conclusion. We show that, if the stimulation amplitude is kept such that neighboring stimulating sites do not produce cross-talk, it is possible to reconstruct visual scenes “pixel-by-pixel” without needing any optimization process. If on the contrary current steering is required and cross-talk is non negligible, then it is very difficult to obtain rules of thumb and the development and use of automatic optimization techniques should be preferable.
摘要介绍。视神经刺激的计算模型可以估计视神经纤维电刺激的神经反应,从而可以利用调节刺激参数来获得特定的目标感知。原则上,这种调整应该以自动的方式进行,以便所选的刺激参数最小化某些给定的与视觉感知质量相关的成本函数,但是这种自动方法的使用仍在研究中,目前还没有令人满意的解决方案。在没有自动方法的情况下,通常通过手动调整来设置增产参数,如果以非原则性的方式进行,则会非常耗时。方法。我们建立了视觉神经纤维单极和双极电刺激的生物物理精确混合模型,以研究纤维放电速率如何依赖于刺激参数。结果。在单极正弦刺激视神经纤维的情况下,我们表明,刺激的幅度控制招募的纤维簇的大小,频率控制它们的放电速率,独立。相反,对于双极刺激,我们表明,当串扰不可忽略时,很难获得将目标纤维的放电速率与刺激参数联系起来的经验法则。结论。我们的研究表明,如果保持刺激幅度,使相邻的刺激位点不产生串扰,就有可能“逐像素”重建视觉场景,而不需要任何优化过程。相反,如果需要电流转向并且串扰不可忽略,那么很难获得经验法则,而开发和使用自动优化技术应该是可取的。
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引用次数: 0
A Concept for Myocardial Current Density Estimation with Magnetoelectric Sensors 磁电传感器估算心肌电流密度的概念
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1023
Gerhard Schmidt, Erik Engelhardt, Eric Elzenheimer, Johannes Hoffman, Tobias Schmidt, Adrian Zaman, Norbert Frey
Abstract In this paper we present a novel noninvasive approach to estimate current densities in the heart from magnetocardiography. The proposed algorithm uses nested optimization to model current densities in equally-sized voxels of myocardial tissue. First-order Thiran all-pass filters are used to describe the propagation between voxels.We demonstrate feasibility of the algorithm for a noise-free single-layer simulation. However, challenges remain, such as addressing measurement noise and optimizing propagation velocity. Overall, this approach has the potential to complement or replace invasive catheter-based electrophysiological studies for localization of arrhythmogenic tissue.
摘要在本文中,我们提出了一种新的无创方法来估计心脏磁图中的电流密度。提出的算法使用嵌套优化来模拟心肌组织等尺寸体素中的电流密度。一阶Thiran全通滤波器用于描述体素之间的传播。我们证明了该算法在无噪声单层仿真中的可行性。然而,挑战仍然存在,例如解决测量噪声和优化传播速度。总的来说,这种方法有可能补充或取代基于导管的有创性电生理研究来定位心律失常组织。
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引用次数: 0
Investigation of manufacturing deviations of CPC scaffolds for improving the design process CPC支架制造偏差调查,改进设计工艺
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1138
Alexander Seidler, Martin Pendzik, Arthur Hilbig, Philipp Sembdner, Stefan Holtzhausen, Kristin Paetzold-Byhain
Abstract In current implantology, calcium phosphate cement (CPC) is increasingly used. A special focus is given to CPC scaffolds, as they are suitable for cell settlement and growth due to their positive osteoconductive properties. The design of the scaffolds is of decisive importance for this. The value ranges of the geometric parameters of these scaffolds (e.g. path distance, path diameter), which are positive for both cell settlement and cell growth, are very small. Manufacturing deviations therefore have a significant impact on cell settlement and growth. The pasty manufacturing consistency can cause sagging at the path interstices of a layer immediately below, resulting in significant manufacturing deviations. A larger path distance and thus a larger path interstitial space promotes cell settlement, but at the same time increases the risk of CPC path shape inconsistency. This in turn can have a negative effect on cell settlement. Therefore, the aim of this paper is to investigate the discrepancies between the nominal and actual state at a path distance favourable to cell settlement on the basis of manufactured CPC scaffolds. In this context, geometric and manufacturing parameters of the shape deviation are to be identified and constructive design adaptations are to be derived on the basis of these. In addition, the effects of the shape and position deviations on the flow behaviour will be investigated.
在目前的种植学中,磷酸钙水泥(CPC)的应用越来越广泛。CPC支架是一个特别的焦点,因为它们适合于细胞沉降和生长,因为它们具有积极的骨传导特性。支架的设计在这方面具有决定性的意义。这些支架的几何参数(如路径距离、路径直径)对细胞沉降和细胞生长都是正的,但其取值范围非常小。因此,制造偏差对细胞沉降和生长有重大影响。膏体的制造一致性会导致在下一层的路径间隙处产生下垂,从而导致显著的制造偏差。更大的路径距离和更大的路径间隙空间促进了细胞沉降,但同时也增加了CPC路径形状不一致的风险。这反过来又会对细胞沉降产生负面影响。因此,本文的目的是研究在制造的CPC支架的基础上,在有利于细胞沉降的路径距离上的标称状态和实际状态之间的差异。在这种情况下,要确定形状偏差的几何和制造参数,并在此基础上推导出建设性的设计适应性。此外,还将研究形状和位置偏差对流动特性的影响。
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引用次数: 0
3D-printed scaffolds with perfusable channels for low-cost large construct 3D cell culture 具有可灌注通道的3D打印支架,用于低成本的大型3D细胞培养
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1166
Klaus Kreuels, Carina Schemmer, Arnold Gillner, Maximilian Frederick Flesch, Arnold Gillner
Abstract This study presents a novel approach for threedimensional (3D) cell culture using a two-component system consisting of a 3D-printed scaffold structure combined with a perfusion channel. A polymeric scaffold structure with an overall size of 9 mm x 9 mm x 1 mm composed of a cubic lattice with a web thickness of 200 μm and pore size of 600 μm was 3D-printed using a hot UV-stereolithography (SLA) system. The perfusion channel with an inner diameter of 800 μm and channel wall pores of 300 μm for cell culture medium supply was 3D-printed with the same system and material. Scaffolds were investigated with respect to the printing accuracy by digital microscopy. Cytotoxicity of the materials was assessed using MTT-assay and Live/Dead staining. Scaffold were subsequently seeded with 3T3- fibroblasts within a fibrin-based hydrogel and then conditioned either statically or under passive perfusion using a hydrostatic pressure driven flow system. The results show that the scaffold structure and perfusion channel can be produced with high accuracy and stability allowing a supply of nutrient and oxygen via perfusion channel to the cells within the scaffold. This approach has potential for nutrient supply within larger constructs for tissue engineering and regenerative medicine applications.
本研究提出了一种三维(3D)细胞培养的新方法,该方法使用由3D打印支架结构和灌注通道组成的双组分系统。采用热紫外立体光刻(SLA)系统进行3d打印,制备了一种总尺寸为9mm x 9mm x 1mm的聚合物支架结构,该支架由立方晶格组成,腹板厚度为200 μm,孔径为600 μm。采用相同的体系和材料,3d打印出内径为800 μm、壁孔为300 μm的灌注通道供细胞培养基供应。用数码显微镜对支架的打印精度进行了研究。采用mtt法和活/死染色评估材料的细胞毒性。随后,将3T3-成纤维细胞植入基于纤维蛋白的水凝胶中,然后使用静水压力驱动流系统进行静态或被动灌注调节。结果表明,该支架结构和灌注通道的制备精度高,稳定性好,可使支架内细胞通过灌注通道获得营养和氧气供应。这种方法有潜力在组织工程和再生医学应用的更大结构中提供营养。
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引用次数: 0
Radial compliance of porcine Fallopian tubes ex vivo – perspectives for the development of a gynecological microstent 猪输卵管体外的径向顺应性——妇科微支架的发展前景
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1147
Stefan Siewert, Ariane Dierke, Thomas Stahnke, Swen Großmann, Christoph Brandt-Wunderlich, Laura Supp, Michael Stiehm, Andrea Bock, Klaus-Peter Schmitz, Paula Rosam, Marek Zygmunt
Abstract Fallopian tube occlusions represent one of the most common causes of female sterility. As an innovative treatment approach for affected persons, we previously presented the concept of a novel polymeric, self-expanding, and bioresorbable microstent. As a basis for microstent development, knowledge of the mechanical properties of the anatomical target structure represents a crucial requirement. The current work describes a methodological approach for the experimental determination of radial Fallopian tube compliance using optical coherence tomography. It could be shown that a quantitative assessment of the mechanical properties of porcine Fallopian tube samples - as a whole anatomical structure including the Tunica mucosa, the Tunica muscularis, and the Tunica serosa - is possible, using the described test setup. Future investigations on human samples will allow for valuable information regarding the structural-mechanical properties of the Fallopian tube. Therefore, the current work offers perspectives for the development of a novel gynecological microstent for the treatment of Fallopian tube occlusions.
摘要输卵管阻塞是女性不孕症最常见的原因之一。作为一种创新的治疗方法,我们之前提出了一种新型聚合物、自膨胀、生物可吸收的微支架的概念。作为微支架开发的基础,了解解剖目标结构的力学特性是一个至关重要的要求。目前的工作描述了一种方法方法的实验确定径向输卵管顺应性使用光学相干断层扫描。可以证明,使用所描述的测试装置,可以对猪输卵管样本的机械特性进行定量评估——作为一个整体的解剖结构,包括膜粘膜、肌层和膜浆膜。未来对人类样本的研究将提供有关输卵管结构力学特性的宝贵信息。因此,本研究为开发新型妇科微支架治疗输卵管闭塞提供了前景。
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引用次数: 0
Novel airflow ring for the reduction of germ load in a surgical field 一种新型的气流环,用于减少手术现场的细菌负荷
Q4 Engineering Pub Date : 2023-09-01 DOI: 10.1515/cdbme-2023-1098
Andreas Scherrieble, Elena Haab, Evi Held-Föhn, Carsten Linti, Michael Doser, Götz T. Gresser, Tobias Baumgartner, Claus G. Wandres
Abstract Hospital-acquired infections occur through microbial contamination of the surgical wound and can lead to severe complications. A significant transmission path is the aerogenic transmission, where pathogens stick to floating particles like skin scales or to air moisture. A novel porous airflow ring which is placed around the surgical field aims to overcome this by applying sterile air directly at the operation wound. The ring is provided with an air tight coating at the outer side and allows for fixation on the skin by an adhesive coating at the lower side. To evaluate its performance the airflow ring was placed in an atmosphere with nebulized suspension of Staphylococcus arlettae of a concentration of 5.0 x 10^5 CFU/ml resp. 5.0 x 10^6 CFU/ml within a box. The formation of bacterial colonies (CFU) on contact plates placed within the airflow ring was subsequently determined by visual counting after incubating at 37 °C for one day. CFU counts of the ventilated and the unventilated situation were compared. With the smaller inoculum, the introduction of bacteria into the inner site of the ring was completely prevented, whereas the contact plate of the unventilated ring resulted in 77 to 427 colonies in different trials. With the higher inoculum, the bacteria ingress was very strongly reduced by 99.7% respectively 99.9%. In conclusion the airflow ring shows a strong shielding effect for germs adhered to fog-sized water droplets. To clearly demonstrate the effect, the number of bacteria was greatly increased compared to reality in this setup. It was shown that it can withstand even conditions significantly worse than those encountered in an operating theatre. In order to demonstrate the effect in vivo, clinical trials have to be conducted to confirm the laboratory results.
医院获得性感染是通过外科伤口的微生物污染而发生的,可导致严重的并发症。一个重要的传播途径是空气传播,病原体附着在皮肤鳞片等漂浮颗粒或空气湿度上。一种新型的多孔气流环被放置在手术区域周围,旨在通过将无菌空气直接应用于手术伤口来克服这一问题。所述环在其外侧设有气密涂层,并允许在其下侧通过粘合剂涂层固定在皮肤上。为了评估其性能,将气流环放置在浓度为5.0 × 10^5 CFU/ml的葡萄球菌雾化悬浮液的气氛中。盒内5.0 x 10^6 CFU/ml。在37°C孵育1天后,通过目测计数测定放置在气流环内的接触板上菌落(CFU)的形成。比较通风与不通风情况下的CFU计数。较小的接种量完全阻止了细菌进入环内部位,而不通风环的接触板在不同的试验中产生了77 ~ 427个菌落。在较高的接种量下,细菌的进入率分别降低了99.7%和99.9%。综上所述,气流环对附着在雾状水滴上的细菌具有较强的屏蔽作用。为了清楚地证明这种效果,在这种设置中,细菌的数量大大增加了。研究表明,它甚至可以承受比手术室更恶劣的条件。为了证明在体内的效果,必须进行临床试验来确认实验室结果。
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引用次数: 0
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Current Directions in Biomedical Engineering
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