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Binding Interaction and Stability Analysis of Quercetin and its Derivatives as Potential Inhibitors of Triple Negative Breast Cancer (TNBC) against PARP1 Protein: An in-silico Study. 槲皮素及其衍生物作为三阴性乳腺癌(TNBC)对PARP1蛋白的潜在抑制剂的结合相互作用和稳定性分析:一项硅研究。
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2026-01-01 DOI: 10.2174/0113816128373506250414160220
Md Alfaz Hossain, Fahmida Mariam Fariha, Md Arju Hossain, Md Reduanul Haque Kavey, Md Shamim, Md Mobinul Hoque, Ali Mohamod Wasaf Hasan, Md Ataur Rahman, Abdel Halim Harrath, Md Habibur Rahman

Background: Triple-negative breast cancer (TNBC) is an aggressive subtype characterized by the absence of estrogen and progesterone receptors (ER, PR) and low or absent HER2 expression, limiting treatment options. Quercetin, a flavonoid with anti-cancer properties, has the potential to be a therapeutic intervention.

Objectives: The study aimed to explore the potential of Quercetin derivatives as therapeutic agents for TNBC using several computational methods.

Methods: The study utilized PASS prediction, molecular docking, ADMET prediction, QSAR models, MD simulations, binding free energy, and DFT calculations to evaluate the efficacy of quercetin derivatives.

Results: ADMET analysis confirmed the solubility, non-carcinogenicity, and low toxicity of four quercetin derivatives: LM01, LM02, LM05, and LM10. These derivatives exhibited strong binding affinity against TNBC protein PPAR1, with binding energies of -10.6, -10.7, -11.4, and -10 kcal/mol, respectively. MD simulations confirmed their stability, with consistent RMSD values and favorable RMSF values. Post-simulation calculations and reduced HOMO-LUMO energy gaps further supported their potential as promising candidates.

Conclusion: Our computational findings suggest that quercetin derivatives, particularly LM01, LM02, and LM10, exhibit strong stability and binding affinity, positioning them as promising candidates for TNBC treatment. Further experimental validation is required to confirm their therapeutic potential.

背景:三阴性乳腺癌(TNBC)是一种侵袭性亚型,其特征是雌激素和孕激素受体(ER, PR)缺乏,HER2表达低或缺失,限制了治疗选择。槲皮素是一种具有抗癌特性的类黄酮,有可能成为一种治疗干预手段。目的:利用几种计算方法探讨槲皮素衍生物作为TNBC治疗剂的潜力。方法:采用PASS预测、分子对接、ADMET预测、QSAR模型、MD模拟、结合自由能、DFT计算等方法评价槲皮素衍生物的疗效。结果:ADMET分析证实了槲皮素衍生物LM01、LM02、LM05、LM10的溶解性、无致癌性、低毒性。这些衍生物对TNBC蛋白PPAR1具有较强的结合亲和力,结合能分别为-10.6,-10.7,-11.4和-10 kcal/mol。MD模拟证实了它们的稳定性,RMSD值一致,RMSF值有利。模拟后的计算和减小的HOMO-LUMO能量差距进一步支持了它们作为有希望的候选者的潜力。结论:我们的计算结果表明,槲皮素衍生物,特别是LM01、LM02和LM10,具有很强的稳定性和结合亲和力,使它们成为TNBC治疗的有希望的候选者。需要进一步的实验验证来确认其治疗潜力。
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引用次数: 0
Porphyrin-based MOFs for Gene Delivery in Cancer Therapy: Recent Advances and Progress. 基于卟啉的mof用于癌症治疗中的基因传递:最新进展和进展。
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2026-01-01 DOI: 10.2174/0113816128359818250407020852
Saina Kabiri, Rahmatollah Rahimi, M R Mozafari, Seyed Morteza Naghib

Cancer is one of the leading causes of death worldwide, which involves the uncontrolled growth of body cells. Cytotoxic chemotherapy drugs, such as tamoxifen, doxorubicin, methotrexate, and cisplatin, have shortcomings that have deprived these treatments of the desired efficiency to destroy tumor cells. Poor pharmacokinetics, severe side effects, and low targeting properties are examples of these shortcomings. Meanwhile, in the last few years, the use of nanocarriers in drug delivery systems has grown significantly. Porphyrins, also called life pigments, are classified as organic complexes. Due to their unique electrochemical and photophysical properties, they have been used in various fields, such as photodynamic therapy, fluorescence, and photoacoustic imaging. However, due to the limitations of these compounds in aqueous environments, such as aggregation by surface molecules, weak absorption in the biological spectral window, self-quenching, and poor chemical and optical stability, there are gaps in the clinical applications of porphyrins. To overcome these challenges, researchers have developed porphyrin-based MOFs. Metal-organic frameworks (MOFs), made of metal ions and clusters coupled with organic linkers, such as porphyrins, through self-assembly, retain the properties of porphyrins while offering additional advantages. Several synthetic approaches and significant advances have been made in the development of porphyrin-based MOFs, including combination therapies, advanced drug delivery, cancer therapy, and photodynamic therapy. Porphyrin-based metal-organic frameworks represent a transformative approach in cancer treatment by integrating multiple therapeutic functions, improving targeting mechanisms, ensuring safety, increasing drug delivery efficiency, and overcoming tumor biological barriers, such as hypoxia, and their day-to-day development promises the formation of more personalized and effective strategies.

癌症是世界范围内导致死亡的主要原因之一,它涉及到身体细胞不受控制的生长。细胞毒性化疗药物,如他莫昔芬、阿霉素、甲氨蝶呤和顺铂,都有缺点,使这些治疗方法无法达到预期的破坏肿瘤细胞的效果。不良的药代动力学,严重的副作用和低靶向性是这些缺点的例子。同时,在过去的几年里,纳米载体在药物输送系统中的应用有了显著的增长。卟啉也被称为生命色素,是一种有机复合物。由于其独特的电化学和光物理性质,它们已被应用于光动力治疗、荧光和光声成像等各个领域。然而,由于这些化合物在水环境中的局限性,如表面分子聚集,生物光谱窗口吸收弱,自猝灭,化学和光学稳定性差,卟啉在临床应用中存在空白。为了克服这些挑战,研究人员开发了基于卟啉的mof。金属-有机框架(mof)由金属离子和簇与有机连接剂(如卟啉)通过自组装而成,在保留卟啉性质的同时具有额外的优点。基于卟啉的mof的几种合成方法和发展取得了重大进展,包括联合治疗、先进的药物输送、癌症治疗和光动力治疗。基于卟啉的金属有机框架通过整合多种治疗功能,改善靶向机制,确保安全性,提高药物传递效率,克服肿瘤生物屏障(如缺氧),代表了癌症治疗的变革性方法,它们的日常发展有望形成更加个性化和有效的策略。
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引用次数: 0
Cancer Management Using Photodynamic Therapy: Fundamentals, Mechanism and Advances. 利用光动力疗法治疗癌症:基础、机制和进展。
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2026-01-01 DOI: 10.2174/0113816128364893250603035546
Mitul Lovras, Shivam Rajput, Sathvik Belagodu Sridhar, Javedh Shareef, Rishabha Malviya

PDT is a common and minimally invasive treatment used for certain types of cancer. Photodynamic therapy involves the generation of reactive oxygen species, resulting in cellular apoptosis and disruption of the tumor microenvironment. This review presents a comprehensive examination of recent developments in Photodynamic Therapy (PDT), detailing its mechanisms, the importance of photosensitizers, and their applications across various cancer types. Photosensitizers are essential in photodynamic therapy as they generate reactive oxygen species when exposed to light. Advanced photosensitizers demonstrate high conversion efficiency, improved tumor specificity, and reduced adverse effects. Recent advancements have led to the creation of photosensitizers that exhibit enhanced solubility, stability, and the ability to selectively accumulate in tumors. Combination therapies that incorporate PDT exhibit notable therapeutic outcomes, indicating substantial progress in the field. Recent developments in photodynamic therapy, particularly those that boost immune responses, show considerable promise in significantly enhancing the effectiveness of tumor elimination. These advancements have the potential to enhance the therapeutic application of photodynamic therapy, offering new possibilities for cancer treatment.

PDT是一种常见的微创治疗方法,用于治疗某些类型的癌症。光动力疗法涉及活性氧的产生,导致细胞凋亡和肿瘤微环境的破坏。本文综述了光动力疗法(PDT)的最新进展,详细介绍了其机制、光敏剂的重要性及其在各种癌症类型中的应用。光敏剂在光动力治疗中是必不可少的,因为它们在暴露于光下时会产生活性氧。先进的光敏剂具有高转化效率、提高肿瘤特异性和减少不良反应的特点。最近的进展导致了光敏剂的产生,这些光敏剂表现出增强的溶解度、稳定性和在肿瘤中选择性积累的能力。结合PDT的联合疗法表现出显著的治疗效果,表明该领域取得了实质性进展。光动力疗法的最新进展,特别是那些增强免疫反应的疗法,在显著提高肿瘤消除的有效性方面显示出相当大的希望。这些进展有可能增强光动力疗法的治疗应用,为癌症治疗提供新的可能性。
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引用次数: 0
Revolutionizing Antibiotic Delivery: Harnessing 3D-Printing Technology to Combat Bacterial Resistance. 革命性的抗生素输送:利用3d打印技术对抗细菌耐药性。
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2026-01-01 DOI: 10.2174/0113816128365632250524160128
Shubham Singh, Mohit Kumar, Deeksha Choudhary, Dikshant, Devesh Kumar, Shruti Chopra, Amit Bhatia

Antibiotic resistance poses a significant threat to public health, rendering many life-saving medications ineffective as pathogenic microorganisms develop resistance spontaneously. This results in infections that are difficult to treat, with limited or no treatment options. Traditionally, addressing this challenge involves developing new pharmaceuticals, a lengthy and costly process. However, a more efficient approach lies in improving drug delivery methods, which can be quicker and more economical. In recent years, 3D printing technology has emerged as a groundbreaking, industry-accepted technique that enables the affordable, simple, and rapid manufacturing of pharmaceuticals. This technology supports iterative design-build-test cycles, facilitating the development of a wide range of products, from simple 3D-printed tablets to complex medical devices, tailored for diverse applications. This article explores innovative strategies in the search for novel antibiotics, the development of more effective preventative measures, and, crucially, a deeper understanding of the ecology of antibiotics and antibiotic resistance. It provides an overview of these issues' historical and current status, emphasizing the potential of 3D printing to address antibiotic resistance. Additionally, it discusses how to expand conceptual frameworks in response to recent advancements in chemotherapy, antimicrobials, and antibiotic resistance. The article highlights various notable efforts in utilizing 3D printing to develop antimicrobial dosage forms and medical devices, offering insights into future possibilities.

抗生素耐药性对公众健康构成重大威胁,由于病原微生物自发产生耐药性,使许多挽救生命的药物失效。这导致感染难以治疗,治疗选择有限或根本没有。传统上,解决这一挑战涉及开发新药,这是一个漫长而昂贵的过程。然而,更有效的方法在于改进给药方法,使其更快、更经济。近年来,3D打印技术已经成为一项突破性的、行业公认的技术,使人们能够负担得起、简单、快速地制造药品。该技术支持迭代设计-构建-测试周期,促进了从简单的3d打印片剂到复杂医疗设备等各种产品的开发,为各种应用量身定制。本文探讨了寻找新型抗生素的创新策略,开发更有效的预防措施,以及更重要的是,对抗生素生态和抗生素耐药性的更深入了解。它概述了这些问题的历史和现状,强调了3D打印解决抗生素耐药性的潜力。此外,它还讨论了如何扩展概念框架,以应对化疗,抗菌剂和抗生素耐药性的最新进展。本文重点介绍了利用3D打印开发抗菌剂型和医疗设备的各种值得注意的努力,并提供了对未来可能性的见解。
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引用次数: 0
Multi-Segmental Evaluation of Intestinal Permeability of Amlodipine at Two Dose Levels. 不同剂量下氨氯地平肠通透性的多节段评价。
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-12-02 DOI: 10.2174/0113816128381339250422080602
Müge Ateş, Agata Bogacz Stelmasińska, Michał Stelmasińska, Liban Barre, Ebru Büyüktuncel, Mustafa Sinan Kaynak, Selma Şahin

Background: Intestinal permeability plays a crucial role in drug absorption, as it varies across different gastrointestinal regions, affecting the bioavailability of orally administered drugs. This variability, combined with dose-dependent absorption, influences the overall efficacy and pharmacokinetics of the drug.

Objective: This study aimed to investigate the impact of three intestinal regions (jejunum, ileum, and colon) along with two different doses of amlodipine (AML) (5 mg and 10 mg) on its permeability.

Methods: An optimized HPLC method was developed and validated for the simultaneous quantification of AML, metoprolol (MTP), and phenol red (PR), while a modified single-pass intestinal perfusion (SPIP) was used to assess AML permeability across different intestinal segments.

Results: Net Water Flux (NWF) showed significant fluctuations, with high positive values in the colon, indicating distinct physiological responses in this region. The effective permeability (Peff) of AML varied across different intestinal segments and doses. In the jejunum and ileum, the Peff of AML decreased with increasing doses from 5 mg to 10 mg, while in the colon, Peff remained relatively stable. Peff values ranged from 3.50 × 10-4 cm/s for the 5 mg dose to 1.80 × 10-4 cm/s for the 10 mg dose in the jejunum, from 3.30 × 10-4 cm/s (5 mg) to 2.41 × 10-4 cm/s (10 mg) in the ileum, and from 6.65 × 10-4 cm/s (5 mg) to 6.79 × 10-4 cm/s (10 mg) in the colon.

Conclusion: This study demonstrated significant segmental and dose-dependent variations in the intestinal permeability of AML using the SPIP model in rats.

背景:肠道通透性在药物吸收中起着至关重要的作用,因为它在不同的胃肠道区域不同,影响口服药物的生物利用度。这种可变性与剂量依赖性吸收相结合,影响药物的总体疗效和药代动力学。目的:本研究旨在探讨两种不同剂量氨氯地平(AML) (5 mg和10 mg)对空肠、回肠和结肠三个肠道区域通透性的影响。方法:建立并验证了同时定量AML、美托洛尔(MTP)和酚红(PR)的高效液相色谱(HPLC)优化方法,采用改良的单次肠灌注法(SPIP)评估AML在不同肠段的渗透性。结果:净水通量(NWF)波动明显,在结肠处呈高正值,表明该区域有明显的生理反应。急性髓性白血病的有效渗透性(Peff)在不同肠段和剂量之间存在差异。在空肠和回肠,AML的Peff随着剂量从5 mg增加到10 mg而下降,而在结肠,Peff保持相对稳定。空肠的Peff值从5 mg剂量的3.50 × 10-4 cm/s到10 mg剂量的1.80 × 10-4 cm/s不等,回肠的Peff值从3.30 × 10-4 cm/s (5 mg)到2.41 × 10-4 cm/s (10 mg)不等,结肠的Peff值从6.65 × 10-4 cm/s (5 mg)到6.79 × 10-4 cm/s (10 mg)不等。结论:本研究表明,SPIP模型大鼠急性髓性白血病的肠通透性存在显著的节段性和剂量依赖性变化。
{"title":"Multi-Segmental Evaluation of Intestinal Permeability of Amlodipine at Two Dose Levels.","authors":"Müge Ateş, Agata Bogacz Stelmasińska, Michał Stelmasińska, Liban Barre, Ebru Büyüktuncel, Mustafa Sinan Kaynak, Selma Şahin","doi":"10.2174/0113816128381339250422080602","DOIUrl":"https://doi.org/10.2174/0113816128381339250422080602","url":null,"abstract":"<p><strong>Background: </strong>Intestinal permeability plays a crucial role in drug absorption, as it varies across different gastrointestinal regions, affecting the bioavailability of orally administered drugs. This variability, combined with dose-dependent absorption, influences the overall efficacy and pharmacokinetics of the drug.</p><p><strong>Objective: </strong>This study aimed to investigate the impact of three intestinal regions (jejunum, ileum, and colon) along with two different doses of amlodipine (AML) (5 mg and 10 mg) on its permeability.</p><p><strong>Methods: </strong>An optimized HPLC method was developed and validated for the simultaneous quantification of AML, metoprolol (MTP), and phenol red (PR), while a modified single-pass intestinal perfusion (SPIP) was used to assess AML permeability across different intestinal segments.</p><p><strong>Results: </strong>Net Water Flux (NWF) showed significant fluctuations, with high positive values in the colon, indicating distinct physiological responses in this region. The effective permeability (Peff) of AML varied across different intestinal segments and doses. In the jejunum and ileum, the Peff of AML decreased with increasing doses from 5 mg to 10 mg, while in the colon, Peff remained relatively stable. Peff values ranged from 3.50 × 10-4 cm/s for the 5 mg dose to 1.80 × 10-4 cm/s for the 10 mg dose in the jejunum, from 3.30 × 10-4 cm/s (5 mg) to 2.41 × 10-4 cm/s (10 mg) in the ileum, and from 6.65 × 10-4 cm/s (5 mg) to 6.79 × 10-4 cm/s (10 mg) in the colon.</p><p><strong>Conclusion: </strong>This study demonstrated significant segmental and dose-dependent variations in the intestinal permeability of AML using the SPIP model in rats.</p>","PeriodicalId":10845,"journal":{"name":"Current pharmaceutical design","volume":" ","pages":""},"PeriodicalIF":2.8,"publicationDate":"2025-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145660549","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploring the Mechanism of Huachansu Injection for Lung Cancer Based on Network Pharmacology and Molecular Docking. 基于网络药理学和分子对接探索花喘素注射液治疗肺癌的作用机制。
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-22 DOI: 10.2174/0113816128404080251014113948
Mingyu Liu, Changqing Qin, Chunqin Zhao, Qiuhua Song, Yuanlei Yue, Xiao Li

Introduction: Huachansu injection (HCSI), a clinical traditional Chinese medicine (TCM) preparation, is used to treat non-small cell lung cancer (NSCLC), but the mechanisms of its core components (bufadienolides) remain to be further elucidated. The study aims to explore the mechanisms of bufadienolides from HCSI against NSCLC through network pharmacology and molecular docking.

Methods: The bufadienolides components in HCSI were retrieved from relevant literature. By integrating data from public databases, we identified relevant targets of bufadienolides and NSCLC, then constructed a protein- protein interaction (PPI) network and a "drug-components-targets" network. The key targets and the core components were screened via topological analysis of two networks, and their binding affinity was evaluated through molecular docking, with enrichment analysis performed.

Results: A total of 26 bufadienolides components and 5396 NSCLC targets were collected. The PPI network indicated that HCSI treatment of NSCLC primarily through 10 key targets: HSP90AB1, HSP90AA1, SRC, ESR1, EGFR, BCL-2, MTOR, CCND1, STAT3, and AKT1. Enrichment analysis showed that HCSI treatment of NSCLC mainly involves peptidyl serine phosphorylation, protein kinase complex, PI3K-AKT, and MAPK signaling pathway. Additionally, molecular docking showed that CCND1 and HSP90AB1 had the best binding energy with the core components.

Discussion: HCSI therapy for NSCLC has the advantage of multi-component, multi-target, and multipathway synergistic regulation. It primarily inhibits cancer cell proliferation, induces cell cycle arrest and apoptosis through targets such as HSP90, CCND1, and AKT1, and related pathways.

Conclusion: The study provides significant theoretical support for understanding the pharmacological basis and mechanisms of HCSI in the treatment of NSCLC, and lays the foundation for developing new multitargeted treatment strategies for NSCLC based on HCSI.

简介:花参素注射液(HCSI)是一种用于治疗非小细胞肺癌(NSCLC)的临床中药制剂,但其核心成分(bufadienolides)的作用机制尚待进一步阐明。本研究旨在通过网络药理学和分子对接的方法,探讨HCSI中bufadienolides抗NSCLC的作用机制。方法:从相关文献中检索丁菲二烯内酯类成分。通过整合公共数据库数据,我们确定了蟾法二烯内酯类药物与NSCLC的相关靶点,并构建了蛋白-蛋白相互作用(PPI)网络和“药物成分-靶点”网络。通过两个网络的拓扑分析筛选关键靶点和核心组分,通过分子对接评估其结合亲和力,并进行富集分析。结果:共收集到26个丁二烯内酯成分和5396个NSCLC靶点。PPI网络表明,HCSI治疗NSCLC主要通过10个关键靶点:HSP90AB1、HSP90AA1、SRC、ESR1、EGFR、BCL-2、MTOR、CCND1、STAT3和AKT1。富集分析显示HCSI治疗NSCLC主要涉及肽基丝氨酸磷酸化、蛋白激酶复合物、PI3K-AKT和MAPK信号通路。此外,分子对接表明,CCND1和HSP90AB1与核心组分的结合能最好。讨论:HCSI治疗NSCLC具有多组分、多靶点、多途径协同调控的优势。主要通过HSP90、CCND1、AKT1等靶点及相关通路抑制癌细胞增殖,诱导细胞周期阻滞和凋亡。结论:本研究为了解HCSI治疗NSCLC的药理学基础和机制提供了重要的理论支持,为基于HCSI开发新的NSCLC多靶点治疗策略奠定了基础。
{"title":"Exploring the Mechanism of Huachansu Injection for Lung Cancer Based on Network Pharmacology and Molecular Docking.","authors":"Mingyu Liu, Changqing Qin, Chunqin Zhao, Qiuhua Song, Yuanlei Yue, Xiao Li","doi":"10.2174/0113816128404080251014113948","DOIUrl":"https://doi.org/10.2174/0113816128404080251014113948","url":null,"abstract":"<p><strong>Introduction: </strong>Huachansu injection (HCSI), a clinical traditional Chinese medicine (TCM) preparation, is used to treat non-small cell lung cancer (NSCLC), but the mechanisms of its core components (bufadienolides) remain to be further elucidated. The study aims to explore the mechanisms of bufadienolides from HCSI against NSCLC through network pharmacology and molecular docking.</p><p><strong>Methods: </strong>The bufadienolides components in HCSI were retrieved from relevant literature. By integrating data from public databases, we identified relevant targets of bufadienolides and NSCLC, then constructed a protein- protein interaction (PPI) network and a \"drug-components-targets\" network. The key targets and the core components were screened via topological analysis of two networks, and their binding affinity was evaluated through molecular docking, with enrichment analysis performed.</p><p><strong>Results: </strong>A total of 26 bufadienolides components and 5396 NSCLC targets were collected. The PPI network indicated that HCSI treatment of NSCLC primarily through 10 key targets: HSP90AB1, HSP90AA1, SRC, ESR1, EGFR, BCL-2, MTOR, CCND1, STAT3, and AKT1. Enrichment analysis showed that HCSI treatment of NSCLC mainly involves peptidyl serine phosphorylation, protein kinase complex, PI3K-AKT, and MAPK signaling pathway. Additionally, molecular docking showed that CCND1 and HSP90AB1 had the best binding energy with the core components.</p><p><strong>Discussion: </strong>HCSI therapy for NSCLC has the advantage of multi-component, multi-target, and multipathway synergistic regulation. It primarily inhibits cancer cell proliferation, induces cell cycle arrest and apoptosis through targets such as HSP90, CCND1, and AKT1, and related pathways.</p><p><strong>Conclusion: </strong>The study provides significant theoretical support for understanding the pharmacological basis and mechanisms of HCSI in the treatment of NSCLC, and lays the foundation for developing new multitargeted treatment strategies for NSCLC based on HCSI.</p>","PeriodicalId":10845,"journal":{"name":"Current pharmaceutical design","volume":" ","pages":""},"PeriodicalIF":2.8,"publicationDate":"2025-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145586079","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Review on Molecular Targeting, Pharmacological Action, and Advanced Biopharmaceutical Aspects for the Management of Alzheimer's Disease. 阿尔茨海默病的分子靶向、药理作用和先进生物制药研究进展
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-05 DOI: 10.2174/0113816128387875250805042824
Ram Ajay Gupta, Rajni, Kamal Shah, Hitesh Kumar Dewangan

Alzheimer's disease (AD) is an ongoing progressive neurodegenerative disorder that predominantly affects elderly individuals. A systematic literature search was conducted using electronic databases such as PubMed, Scopus, Web of Science, and Google Scholar. Peer-reviewed articles, clinical trial reports, and experimental studies published in English within the last 15 years were considered. The keywords used for the search included "Alzheimer's disease," "amyloid-beta," "tau protein," "neuroinflammation," "immunotherapy," "drug repurposing," and "experimental treatment strategies." It is the most common form of dementia, ultimately leading to death in advanced stages. Recent advances in AD have featured the expected role of antiamyloid, anti-tau, and anti-inflammatory therapies. Nonetheless, these treatments are still in various stages of preclinical and clinical trials. Moreover, drug repurposing is another promising avenue to identify effective therapeutic alternatives for Alzheimer's disease. This review highlights the underlying pathophysiological mechanisms of AD along with the limits of existing treatments. It also includes two methodologies, specifically; active immunotherapy and passive immunotherapy. Active immunotherapy tactics include the administration of antigens to stimulate antibody production. Additionally, this study discusses several experimental drugs and novel pharmaceutical approaches for AD.

阿尔茨海默病(AD)是一种持续进行性神经退行性疾病,主要影响老年人。利用PubMed、Scopus、Web of Science、谷歌Scholar等电子数据库进行系统文献检索。同行评议的文章,临床试验报告,以及在过去15年内用英语发表的实验研究被考虑在内。用于搜索的关键词包括“阿尔茨海默病”、“淀粉样蛋白- β”、“tau蛋白”、“神经炎症”、“免疫疗法”、“药物再利用”和“实验性治疗策略”。这是痴呆症最常见的形式,最终导致晚期死亡。阿尔茨海默病的最新进展是抗淀粉样蛋白、抗tau蛋白和抗炎治疗的预期作用。尽管如此,这些治疗方法仍处于临床前和临床试验的各个阶段。此外,药物再利用是确定阿尔茨海默病有效治疗方案的另一个有希望的途径。这篇综述强调了AD的潜在病理生理机制以及现有治疗方法的局限性。具体来说,它还包括两种方法;主动免疫治疗和被动免疫治疗。主动免疫治疗策略包括给予抗原以刺激抗体的产生。此外,本研究还讨论了几种实验性药物和新的药物治疗方法。
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引用次数: 0
Molecular Dynamics and Energetic Insights into Novel PARP15 Inhibitors: A Structural Approach for Targeting BRCA-Mutated Breast Cancer. 分子动力学和新的PARP15抑制剂的能量洞察:一种靶向brca突变乳腺癌的结构方法。
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-04 DOI: 10.2174/0113816128395302251006180024
Badriyah Shadid Alotaibi, Vivek Dhar Dwivedi, Mohammad Amjad Kamal

Introduction: Breast cancer remains a critical global health issue, particularly in patients with BRCA1/2 mutations, which lead to genomic instability and increased cancer susceptibility. While PARP inhibitors targeting PARP1 and PARP2 have shown clinical success through synthetic lethality, PARP15, a mono-ADP-ribosyltransferase involved in DNA repair and tumour progression, remains largely understudied.

Method: A structure-based virtual screening approach was applied to identify potential PARP15 inhibitors. The screening was performed on a Bioactive Screening Compound Library consisting of over 12,200 druglike small molecules. Using the MTiOpenScreen platform, 1,500 candidate compounds were initially shortlisted. Molecular docking was then conducted to identify top-binding compounds, followed by 500- nanosecond molecular dynamics simulations to assess complex stability. Principal component analysis (PCA), free energy landscape (FEL) evaluation, and absorption, distribution, metabolism, and excretion (ADME) profiling were also performed to characterise compound behaviour and drug-likeness.

Results: Three compounds, F2002-0551, F2028-0309, and F1495-1822, emerged with docking scores surpassing the known PARP15 inhibitor, Niraparib. Molecular dynamics simulations confirmed their structural stability with low RMSD values and favourable FELs. PCA revealed consistent ligand dynamics, and ADME analysis showed high gastrointestinal absorption and other drug-like characteristics. Superimposition analysis demonstrated minimal deviation in docked poses, indicating strong and stable interactions with PARP15.

Discussion: These results highlight the therapeutic potential of the selected compounds as novel PARP15 inhibitors. Their favourable binding stability and pharmacokinetic profiles support their candidacy for further development against BRCA-mutated breast cancer.

Conclusion: F2002-0551, F2028-0309, and F1495-1822 represent promising leads for PARP15 inhibition. This study offers a computational foundation for future experimental validation and therapeutic exploration in BRCA-associated breast cancer.

乳腺癌仍然是一个重要的全球健康问题,特别是在BRCA1/2突变患者中,BRCA1/2突变导致基因组不稳定和癌症易感性增加。虽然靶向PARP1和PARP2的PARP抑制剂已通过合成致死性显示出临床成功,但PARP15(一种参与DNA修复和肿瘤进展的单adp核糖基转移酶)仍在很大程度上未得到充分研究。方法:采用基于结构的虚拟筛选方法鉴定潜在的PARP15抑制剂。筛选是在一个由超过12200个药物样小分子组成的生物活性筛选化合物文库上进行的。使用MTiOpenScreen平台,1500种候选化合物最初入围。然后进行分子对接以确定顶部结合化合物,随后进行500纳秒的分子动力学模拟以评估复合物的稳定性。主成分分析(PCA)、自由能景观(FEL)评价和吸收、分布、代谢和排泄(ADME)分析也用于表征化合物的行为和药物相似性。结果:3个化合物F2002-0551、F2028-0309和F1495-1822的对接评分超过了已知的PARP15抑制剂Niraparib。分子动力学模拟证实了它们的结构稳定性,RMSD值低,FELs良好。PCA显示了一致的配体动力学,ADME分析显示了高胃肠道吸收和其他药物样特征。叠加分析表明,停靠姿态偏差最小,表明与PARP15的相互作用强而稳定。讨论:这些结果突出了所选化合物作为新型PARP15抑制剂的治疗潜力。其良好的结合稳定性和药代动力学特征支持其进一步开发抗brca突变乳腺癌的候选资格。结论:F2002-0551、F2028-0309和F1495-1822是抑制PARP15的有希望的线索。该研究为未来brca相关乳腺癌的实验验证和治疗探索提供了计算基础。
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引用次数: 0
Applications of Artificial Intelligence and Machine Learning in Microbiome and Colorectal Cancer Research: Diagnostic Advances, Prognostic Tools, and Forensic Implications. 人工智能和机器学习在微生物组和结直肠癌研究中的应用:诊断进展、预后工具和法医学意义。
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-04 DOI: 10.2174/0113816128405592251004061813
Nivetha Baskaran, Mowyla V, Sowmiya S, Jasmine Ranjan, Anas Islam, Md Sadique Hussain, Biplab Debnath, Sumel Ashique

Artificial Intelligence (AI) and Machine Learning (ML) are rapidly transforming microbiome and colorectal cancer (CRC) research by enabling high-throughput data analysis and predictive modelling. This review highlights the current applications of AI/ML tools, such as Convolutional Neural Networks, Random Forest classifiers, and Support Vector Machines, in CRC diagnostics and microbiome profiling. It discusses how AI-integrated endoscopic and imaging systems improve polyp detection accuracy and reduce diagnostic delays. The manuscript also introduces the novel use of AI and microbial fingerprints in forensic science, including postmortem interval estimation and individual identification. Lastly, emerging trends in microbiotabased precision medicine and ethical considerations surrounding AI deployment are explored. These insights underscore AI/ML's potential in reshaping clinical diagnostics, prognostics, and forensic practices related to CRC. This review emphasizes the translational impact of AI/ML in CRC, from bench to bedside to the courtroom, highlighting both current challenges and future research directions.

人工智能(AI)和机器学习(ML)通过实现高通量数据分析和预测建模,正在迅速改变微生物组和结直肠癌(CRC)的研究。本文重点介绍了卷积神经网络、随机森林分类器和支持向量机等人工智能/机器学习工具在CRC诊断和微生物组分析中的应用。它讨论了人工智能集成的内镜和成像系统如何提高息肉检测的准确性并减少诊断延迟。该手稿还介绍了人工智能和微生物指纹在法医科学中的新应用,包括死后间隔估计和个体识别。最后,探讨了基于微生物的精准医学的新趋势和围绕人工智能部署的伦理考虑。这些见解强调了AI/ML在重塑与结直肠癌相关的临床诊断、预后和法医实践方面的潜力。这篇综述强调了AI/ML在CRC中的转化影响,从法庭到床边再到法庭,强调了当前的挑战和未来的研究方向。
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引用次数: 0
Doxorubicin-Induced Cardiotoxicity: Exploration of Molecular Pathogenesis and Phytocompound-Based Therapeutic Strategies. 阿霉素诱导的心脏毒性:分子发病机制的探索和基于植物化合物的治疗策略。
IF 2.8 4区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-03 DOI: 10.2174/0113816128410093251006160508
Harshal D Pawar, Sanskruti Dusane, Tanisha Sharma, Kartik T Nakhate, Sameer N Goyal

Introduction: Doxorubicin (DOX), a widely used chemotherapeutic agent, is effective against various malignancies, but its clinical application is limited by cumulative dose-dependent cardiotoxicity. The objective of this review is to systematically explore the molecular mechanisms involved in DOX-induced cardiotoxicity (DIC) and evaluate the cardioprotective potential of plant-derived bioactive compounds.

Methods: A comprehensive literature search was conducted using databases, such as PubMed, Scopus, and Web of Science, focusing on studies published in the last two decades. Emphasis was placed on experimental and preclinical models that investigated molecular pathways of DIC and the therapeutic role of phytochemicals.

Results: DOX-induced cardiotoxicity is mediated through a cascade of molecular events, including excessive oxidative and nitrosative stress, mitochondrial damage, apoptosis, impaired autophagy, and altered activity of signaling pathways, such as AMPK, Nrf2, TGF-β1/Smad2, and HIF-1α. Epigenetic dysregulation also contributes to myocardial injury. Phytochemicals, such as flavonoids, polyphenols, and alkaloids, have shown significant cardioprotective effects. These compounds exert their actions by modulating redox homeostasis, preserving mitochondrial function, regulating apoptotic markers, and restoring signaling imbalances.

Discussion: The pleiotropic nature of phytocompounds enables them to target multiple pathological mechanisms associated with DIC. Despite promising in vitro and in vivo evidence, limitations, such as poor bioavailability, lack of standardized dosing, and inadequate clinical data, hinder their translational potential. Novel delivery systems and well-controlled clinical trials are necessary to overcome these challenges.

Conclusion: Plant-derived bioactive compounds show potential in mitigating doxorubicin-induced cardiotoxicity, as supported by preclinical evidence. However, further translational studies are warranted to validate these findings, optimize pharmacokinetics, and evaluate their feasibility in clinical oncology settings.

多柔比星(DOX)是一种广泛使用的化疗药物,对多种恶性肿瘤有效,但其累积剂量依赖性心脏毒性限制了其临床应用。本文旨在系统探讨dox诱导的心脏毒性(DIC)的分子机制,并评价植物源性生物活性化合物的心脏保护潜力。方法:使用PubMed、Scopus、Web of Science等数据库进行全面的文献检索,重点检索近20年发表的研究。重点放在实验和临床前模型,研究DIC的分子途径和植物化学物质的治疗作用。结果:dox诱导的心脏毒性是通过一系列分子事件介导的,包括过度氧化和亚硝化应激、线粒体损伤、细胞凋亡、自噬受损以及信号通路活性改变,如AMPK、Nrf2、TGF-β1/Smad2和HIF-1α。表观遗传失调也会导致心肌损伤。植物化学物质,如类黄酮、多酚和生物碱,已经显示出显著的心脏保护作用。这些化合物通过调节氧化还原稳态、保持线粒体功能、调节凋亡标记物和恢复信号不平衡发挥作用。讨论:植物化合物的多效性使它们能够靶向与DIC相关的多种病理机制。尽管体外和体内证据都很有希望,但生物利用度差、缺乏标准化剂量和临床数据不足等局限性阻碍了它们的转化潜力。克服这些挑战需要新的给药系统和控制良好的临床试验。结论:植物源性生物活性化合物具有减轻阿霉素引起的心脏毒性的潜力,有临床前证据支持。然而,需要进一步的转化研究来验证这些发现,优化药代动力学,并评估其在临床肿瘤学环境中的可行性。
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Current pharmaceutical design
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