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Modeling zoonotic and vector-borne viruses 人畜共患病和病媒传播病毒建模。
IF 5.7 2区 医学 Q1 VIROLOGY Pub Date : 2024-08-01 DOI: 10.1016/j.coviro.2024.101428

The 2013–2016 Ebola virus disease epidemic and the coronavirus disease 2019 pandemic galvanized tremendous growth in models for emerging zoonotic and vector-borne viruses. Therefore, we have reviewed the main goals and methods of models to guide scientists and decision-makers. The elements of models for emerging viruses vary across spectrums: from understanding the past to forecasting the future, using data across space and time, and using statistical versus mechanistic methods. Hybrid/ensemble models and artificial intelligence offer new opportunities for modeling. Despite this progress, challenges remain in translating models into actionable decisions, particularly in areas at highest risk for viral disease outbreaks. To address this issue, we must identify gaps in models for specific viruses, strengthen validation, and involve policymakers in model development.

2013-2016 年埃博拉病毒病的流行和 2019 年冠状病毒病的大流行激发了新出现的人畜共患病毒和病媒传染病毒模型的巨大发展。因此,我们回顾了模型的主要目标和方法,为科学家和决策者提供指导。新发病毒模型的要素各不相同:从了解过去到预测未来,使用跨时空数据,以及使用统计方法和机理方法。混合/集合模型和人工智能为建模提供了新的机遇。尽管取得了这些进展,但在将模型转化为可操作的决策方面仍然存在挑战,尤其是在病毒性疾病爆发风险最高的地区。要解决这个问题,我们必须找出特定病毒模型的不足之处,加强验证工作,并让决策者参与模型开发。
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引用次数: 0
Koala retrovirus and neoplasia: correlation and underlying mechanisms 考拉逆转录病毒和肿瘤:相关性和潜在机制。
IF 5.7 2区 医学 Q1 VIROLOGY Pub Date : 2024-08-01 DOI: 10.1016/j.coviro.2024.101427

The koala retrovirus, KoRV, is one of the few models for understanding the health consequences of retroviral colonization of the germline. Such colonization events transition exogenous infectious retroviruses to Mendelian traits or endogenous retroviruses (ERVs). KoRV is currently in a transitional state from exogenous retrovirus to ERV, which in koalas (Phascolarctos cinereus) has been associated with strongly elevated levels of neoplasia. In this review, we describe what is currently known about the associations and underlying mechanisms of KoRV-induced neoplasia.

考拉逆转录病毒(KoRV)是了解逆转录病毒在生殖系定植对健康影响的少数模型之一。这种定殖事件将外源性传染性逆转录病毒转变为孟德尔性状或内源性逆转录病毒(ERVs)。KoRV 目前正处于从外源性逆转录病毒到 ERV 的过渡阶段,考拉(Phascolarctos cinereus)的肿瘤发病率与此密切相关。在这篇综述中,我们将介绍目前已知的有关 KoRV 诱发肿瘤的关联和内在机制。
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引用次数: 0
Oncogenic Animal Herpesviruses 致癌动物疱疹病毒。
IF 5.7 2区 医学 Q1 VIROLOGY Pub Date : 2024-07-08 DOI: 10.1016/j.coviro.2024.101424
Hafiz S Zafar, Haji Akbar, Huai Xu, Nagendraprabhu Ponnuraj, Kathrine Van Etten, Keith W Jarosinski

Oncogenic viruses play a pivotal role in oncology due to their unique role in unraveling the complexities of cancer development. Understanding the role viruses play in specific cancers is important to provide basic insights into the transformation process, which will help identify potential cellular targets for treatment. This review discusses the diverse role of animal herpesviruses in initiating and promoting various forms of cancer. We will summarize the mechanisms that underlie the development of animal herpesvirus-induced cancer that may provide a basis for developing potential therapeutic interventions or preventative strategies in the future.

致癌病毒在肿瘤学中发挥着举足轻重的作用,因为它们在揭示癌症发展的复杂性方面发挥着独特的作用。了解病毒在特定癌症中扮演的角色非常重要,这将为了解癌症的转化过程提供基础,有助于确定潜在的细胞治疗靶点。本综述将讨论动物疱疹病毒在引发和促进各种癌症中的不同作用。我们将总结动物疱疹病毒诱发癌症的发展机制,为将来开发潜在的治疗干预或预防策略提供依据。
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引用次数: 0
Editorial overview: The lung, the gut, and the genital mucosae: microbial targets and therapeutic playgrounds 编辑综述:肺、肠道和生殖器粘膜:微生物靶标和治疗乐园。
IF 5.7 2区 医学 Q1 VIROLOGY Pub Date : 2024-06-27 DOI: 10.1016/j.coviro.2024.101425
Jean-Michel Sallenave , Zhou Xing
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引用次数: 0
Hepatitis C virus and hepatocellular carcinoma: carcinogenesis in the era of direct-acting antivirals 丙型肝炎病毒与肝细胞癌:直接作用抗病毒药物时代的致癌问题。
IF 5.7 2区 医学 Q1 VIROLOGY Pub Date : 2024-06-25 DOI: 10.1016/j.coviro.2024.101423
Felix Fiehn , Claudia Beisel , Marco Binder

Chronic hepatitis C virus (HCV) infection is a major cause of hepatic fibrosis and cirrhosis, with a risk for the development of hepatocellular carcinoma (HCC). Although highly effective direct-acting antivirals (DAAs) are available, the incidence, morbidity, and mortality of HCV-associated HCC are still high. This article reviews the current knowledge of the mechanisms of HCV-induced carcinogenesis with a special focus on those processes that continue after virus clearance and outlines implications for patient surveillance after DAA treatment.

慢性丙型肝炎病毒(HCV)感染是导致肝纤维化和肝硬化的主要原因,并有发展为肝细胞癌(HCC)的风险。虽然目前已有高效的直接作用抗病毒药物(DAAs),但与 HCV 相关的 HCC 发病率、发病率和死亡率仍然居高不下。本文回顾了目前关于 HCV 致癌机制的知识,特别关注病毒清除后的持续过程,并概述了 DAA 治疗后患者监测的意义。
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引用次数: 0
A comparative review of adenovirus A12 and C5 oncogenes 腺病毒 A12 和 C5 致癌基因的比较研究。
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2024-06-11 DOI: 10.1016/j.coviro.2024.101413
Luca D Bertzbach , Wing-Hang Ip , Konstantin von Stromberg , Thomas Dobner , Roger J Grand

Oncogenic viruses contribute to 15% of global human cancers. To achieve that, virus-encoded oncoproteins deregulate cellular transcription, antagonize common cellular pathways, and thus drive cell transformation. Notably, adenoviruses were the first human viruses proven to induce cancers in diverse animal models. Over the past decades, human adenovirus (HAdV)-mediated oncogenic transformation has been pivotal in deciphering underlying molecular mechanisms. Key adenovirus oncoproteins, encoded in early regions 1 (E1) and 4 (E4), co-ordinate these processes. Among the different adenovirus species, the most extensively studied HAdV-C5 displays lower oncogenicity than HAdV-A12. A complete understanding of the different HAdV-A12 and HAdV-C5 oncoproteins in virus-mediated cell transformation, as summarized here, is relevant for adenovirus research and offers broader insights into viral transformation and oncogenesis.

致癌病毒导致全球 15%的人类癌症。为了实现这一目标,病毒编码的癌蛋白会干扰细胞转录,拮抗常见的细胞通路,从而推动细胞转化。值得注意的是,腺病毒是第一个被证实能在不同动物模型中诱发癌症的人类病毒。过去几十年来,人类腺病毒(HAdV)介导的致癌转化在破译潜在分子机制方面发挥了关键作用。早期区 1(E1)和 4(E4)编码的关键腺病毒癌蛋白协调了这些过程。在不同种类的腺病毒中,研究最广泛的 HAdV-C5 比 HAdV-A12 的致癌率低。本文总结的对不同的 HAdV-A12 和 HAdV-C5 癌蛋白在病毒介导的细胞转化过程中的作用的全面了解与腺病毒研究息息相关,并为病毒转化和致癌提供了更广泛的见解。
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引用次数: 0
Role of mucosal-associated invariant T cells in coronavirus disease 2019 vaccine immunogenicity 粘膜相关不变 T 细胞在 2019 年冠状病毒疾病疫苗免疫原性中的作用
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2024-06-04 DOI: 10.1016/j.coviro.2024.101412
Ali Amini , Paul Klenerman , Nicholas M Provine

Mucosal-associated invariant T (MAIT) cells are an unconventional T cell population that are highly abundant in humans. They possess a semi-invariant T cell receptor (TCR) that recognises microbial metabolites formed during riboflavin biosynthesis, presented on a nonpolymorphic MHC-like molecule MR1. MAIT cells possess an array of effector functions, including type 1, type 17, and tissue repair activity. Deployment of these functions depends on the stimuli they receive through their TCR and/or cytokine receptors. Strong cytokine signalling, such as in response to vaccination, can bypass TCR triggering and provokes a strong proinflammatory response. Although data are still emerging, multiple aspects of MAIT cell biology are associated with modulation of immunity induced by the coronavirus disease 2019 mRNA and adenovirus vector vaccines. In this review, we will address how MAIT cells may play a role in immunogenicity of vaccines against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and how these cells can be harnessed as cellular adjuvants.

粘膜相关不变性 T 细胞(MAIT)是一种非常规的 T 细胞群,在人体内含量很高。它们拥有一种半不变性 T 细胞受体 (TCR),能识别核黄素生物合成过程中形成的微生物代谢物,这些代谢物呈现在非多态性 MHC 类分子 MR1 上。MAIT 细胞具有一系列效应功能,包括 1 型、17 型和组织修复活性。这些功能的发挥取决于它们通过 TCR 和/或细胞因子受体接收到的刺激。强烈的细胞因子信号(如疫苗接种反应)可绕过 TCR 触发,引发强烈的促炎反应。尽管数据仍在不断涌现,但 MAIT 细胞生物学的多个方面都与 2019 年冠状病毒病 mRNA 和腺病毒载体疫苗诱导的免疫调节有关。在本综述中,我们将讨论 MAIT 细胞如何在严重急性呼吸系统综合征冠状病毒 2(SARS-CoV-2)疫苗的免疫原性中发挥作用,以及如何利用这些细胞作为细胞佐剂。
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引用次数: 0
Role of the intestinal microbiota in host defense against respiratory viral infections 肠道微生物群在宿主防御呼吸道病毒感染中的作用
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2024-05-07 DOI: 10.1016/j.coviro.2024.101410
Idia Boncheva , Johanne Poudrier , Emilia L Falcone

Viral infections, including those affecting the respiratory tract, can alter the composition of the intestinal microbiota, which, in turn, can significantly influence both innate and adaptive immune responses, resulting in either enhanced pathogen clearance or exacerbation of the infection, possibly leading to inflammatory complications. A deeper understanding of the interplay between the intestinal microbiota and host immune responses in the context of respiratory viral infections (i.e. the gut–lung axis) is necessary to develop new treatments. This review highlights key mechanisms by which the intestinal microbiota, including its metabolites, can act locally or at distant organs to combat respiratory viruses. Therapeutics aimed at harnessing the microbiota to prevent and/or help treat respiratory viral infections represent a promising avenue for future investigation.

病毒感染(包括影响呼吸道的病毒感染)会改变肠道微生物群的组成,而肠道微生物群又会极大地影响先天性免疫反应和适应性免疫反应,导致病原体清除能力增强或感染加剧,并可能导致炎症并发症。要开发新的治疗方法,就必须深入了解呼吸道病毒感染中肠道微生物群与宿主免疫反应之间的相互作用(即肠道-肺轴)。本综述重点介绍了肠道微生物群(包括其代谢产物)在局部或远处器官对抗呼吸道病毒的关键机制。旨在利用微生物群预防和/或帮助治疗呼吸道病毒感染的疗法是未来研究的一个前景广阔的途径。
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引用次数: 0
Early signaling pathways in virus-infected cells 病毒感染细胞的早期信号通路
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2024-05-07 DOI: 10.1016/j.coviro.2024.101411
Delphine Bonhomme, Enzo Z Poirier

Virus infection activates specific pattern recognition receptors and immune signal transduction, resulting in pro-inflammatory cytokine production and activation of innate immunity. We describe here the molecular organization of early signaling pathways downstream of viral recognition, including conformational changes, post-translational modifications, formation of oligomers, and generation of small-molecule second messengers. Such molecular organization allows tight regulation of immune signal transduction, characterized by swift but transient responses, nonlinearity, and signal amplification. Pathologies of early immune signaling caused by genomic mutations illustrate the fine regulation of the immune transduction cascade.

病毒感染会激活特定的模式识别受体和免疫信号转导,导致促炎细胞因子的产生和先天免疫的激活。我们在此描述了病毒识别下游早期信号通路的分子组织,包括构象变化、翻译后修饰、寡聚体的形成以及小分子第二信使的产生。这种分子组织结构可对免疫信号转导进行严格调控,其特点是反应迅速但短暂、非线性和信号放大。基因组突变导致的早期免疫信号转导病理现象说明了免疫信号转导级联的精细调控。
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引用次数: 0
Inhaled aerosol viral-vectored vaccines against tuberculosis 预防结核病的吸入式气溶胶病毒载体疫苗
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2024-04-03 DOI: 10.1016/j.coviro.2024.101408
Elena Stylianou, Iman Satti

Bacille Calmette-Guérin (BCG) remains the sole licensed vaccine against tuberculosis (TB), despite its variable efficacy in protecting against pulmonary TB. The development of effective TB vaccines faces significant challenges, marked by the absence of validated correlates of protection and predictive animal models. Strategic approaches to enhance TB vaccines and augment BCG efficacy include utilising prime-boost strategies with viral-vectored vaccines and exploring innovative delivery techniques, such as mucosal vaccine administration. Viral vectors offer numerous advantages, including the capacity to accommodate genes encoding extensive antigenic fragments and the induction of robust immune responses. Aerosol delivery aligns with the route of Mycobacterium tuberculosis infection and holds the potential to enhance protective mucosal immunity. Aerosolised viral-vectored vaccines overcome anti-vector immunity, facilitating repeated aerosol deliveries.

尽管卡介苗(Bacille Calmette-Guérin,BCG)在预防肺结核(TB)方面的效果参差不齐,但它仍然是唯一获得许可的结核病(TB)疫苗。开发有效的结核病疫苗面临着巨大的挑战,主要表现在缺乏有效的保护相关因素和预测性动物模型。加强结核病疫苗和提高卡介苗疗效的战略方法包括利用病毒载体疫苗的原代强化策略,以及探索创新的给药技术,如粘膜疫苗给药。病毒载体具有众多优势,包括可容纳编码大量抗原片段的基因和诱导强大的免疫反应。气溶胶给药符合结核分枝杆菌的感染途径,具有增强保护性粘膜免疫的潜力。气溶胶病毒载体疫苗能克服抗载体免疫,有利于重复气溶胶给药。
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引用次数: 0
期刊
Current opinion in virology
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