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From high-throughput to therapeutic: host-directed interventions against influenza viruses 从高通量到治疗性:针对流感病毒的宿主定向干预
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-04-01 DOI: 10.1016/j.coviro.2021.12.014
Joseph D Trimarco , Nicholas S Heaton

Influenza viruses are simultaneously supported and antagonized by factors within the host cell. This close relationship is the theoretical basis for future antivirals that target the host rather than the virus itself, a concept termed host-directed therapeutics. Genetic screening has led to the identification of host factors capable of modulating influenza virus infections, and these factors represent candidate targets for host-directed antiviral strategies. Despite advances in understanding host targets, however, there are currently no host-directed interventions for influenza viruses in clinical use. In this brief review, we discuss some host factors identified in knockout/knockdown and overexpression screens that could potentially be targeted as host-directed influenza intervention strategies. We further comment on the feasibility of changing gene expression in the respiratory tract with RNA delivery vectors and transient CRISPR-mediated gene targeting.

流感病毒同时受到宿主细胞内因子的支持和拮抗。这种密切的关系是未来针对宿主而不是病毒本身的抗病毒药物的理论基础,这一概念被称为宿主导向疗法。遗传筛查已经确定了能够调节流感病毒感染的宿主因子,这些因子代表了宿主定向抗病毒策略的候选靶点。然而,尽管在了解宿主靶点方面取得了进展,但目前尚无临床使用的针对流感病毒的宿主干预措施。在这篇简短的综述中,我们讨论了在敲除/敲除和过表达筛选中发现的一些宿主因子,这些因子可能作为宿主定向流感干预策略的潜在目标。我们进一步评论了用RNA传递载体和瞬时crispr介导的基因靶向改变呼吸道基因表达的可行性。
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引用次数: 6
Phage banks as potential tools to rapidly and cost-effectively manage antimicrobial resistance in the developing world 噬菌体库作为发展中国家快速和经济有效地管理抗菌素耐药性的潜在工具
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-04-01 DOI: 10.1016/j.coviro.2022.101208
Tobi Nagel , Lillian Musila , Milkah Muthoni , Mikeljon Nikolich , Jesca L Nakavuma , Martha RJ Clokie

Lower and middle-income countries seldom develop vaccines and therapeutics for their own populations and are dependent on supplies from industrialized countries, which are often hampered by financial or supply chain limitations. This has resulted in major delays in delivery with significant loss of life, as seen with the coronavirus pandemic. Since the vast majority of deaths from the antimicrobial resistance crisis are expected to occur in developing countries, there is an urgent need for in-country production of antibacterial therapies such as phages. Nationally controlled phage banks might provide such a solution since locally developed phage therapies tailored to endemic bacterial strains could offer cost-effective antibiotic alternatives.

低收入和中等收入国家很少为本国人口开发疫苗和治疗方法,并依赖工业化国家的供应,而这些供应往往受到财政或供应链限制的阻碍。正如冠状病毒大流行所示,这导致了严重的交付延误和重大的生命损失。由于抗菌素耐药性危机造成的绝大多数死亡预计将发生在发展中国家,因此迫切需要在国内生产噬菌体等抗菌疗法。国家控制的噬菌体库可能提供这样一种解决方案,因为当地开发的针对地方性细菌菌株的噬菌体疗法可能提供具有成本效益的抗生素替代品。
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引用次数: 12
An overview of the current state of phage therapy for the treatment of biofilm-related infections 噬菌体治疗生物膜相关感染的现状综述
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-04-01 DOI: 10.1016/j.coviro.2022.101209
Diana P Pires , Luciana Meneses , Ana C Brandão , Joana Azeredo

Bacterial biofilms are involved in many chronic and difficult-to-treat infections. Phage therapy against infectious biofilms is becoming a promising strategy, as suggested by the increasing number of publications demonstrating the efficacy of phages against in vitro formed biofilms. However, the translation between in vitro results to in vivo phage therapy outcome is not straightforward due to the complexity of phage-biofilm interactions in clinical contexts. Here, we provide a critical overview of the in vitro studies of phages for biofilm control of clinical pathogens, followed by the major outcomes and lessons learned from the recently reported case studies (between 2018 and 2021) of phage therapy against biofilm-related infections.

细菌生物膜与许多慢性和难以治疗的感染有关。噬菌体治疗感染生物膜正在成为一种有前途的策略,越来越多的出版物表明,噬菌体对体外形成的生物膜有功效。然而,由于临床环境中噬菌体-生物膜相互作用的复杂性,体外结果与体内噬菌体治疗结果之间的转化并不简单。在这里,我们提供了噬菌体用于临床病原体生物膜控制的体外研究的重要概述,然后是最近报道的噬菌体治疗生物膜相关感染的病例研究(2018年至2021年)的主要结果和经验教训。
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引用次数: 12
RNA viruses and the cGAS-STING pathway: reframing our understanding of innate immune sensing RNA病毒和cGAS-STING通路:重塑我们对先天免疫感知的理解
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-04-01 DOI: 10.1016/j.coviro.2022.101206
Laurence G Webb , Ana Fernandez-Sesma

The past decade has provided critical information about the cytoplasmic innate immune sensing pathway of cyclic GMP-AMP synthase (cGAS) and stimulator of interferon genes (STING). These discoveries have broadened our understanding of the interconnectedness of the cGAS-STING pathway with autophagy, programmed cell death, Rig-I-like receptor (RLR) signaling, DNA independent interferon induction, and how this pathway responds to RNA virus infection. These advances highlight how multiple families of RNA viruses are restricted by and in turn have mechanisms to inhibit cGAS-STING dependent type-I interferon (IFN-I) induction. Here we review recent discoveries of how and why the cGAS-STING pathway responds to infection with RNA viruses, novel findings of RNA viral antagonism of the cGAS-STING innate immune sensing pathway, and attempt to provide context for a shift in thinking as to how critical this DNA sensing pathway is for the restriction of a wide range of RNA viruses.

在过去的十年中,人们对环GMP-AMP合成酶(cGAS)和干扰素基因刺激因子(STING)的细胞质先天免疫感知途径提供了重要的信息。这些发现拓宽了我们对cGAS-STING通路与自噬、程序性细胞死亡、rig - i样受体(RLR)信号传导、DNA非依赖性干扰素诱导以及该通路如何响应RNA病毒感染的相互联系的理解。这些进展强调了多个RNA病毒家族如何受到cGAS-STING依赖性i型干扰素(IFN-I)诱导的限制,并反过来具有抑制机制。在这里,我们回顾了最近关于cGAS-STING通路如何以及为什么对RNA病毒感染做出反应的发现,以及cGAS-STING先天免疫感知通路的RNA病毒对抗的新发现,并试图为这种DNA感知通路对多种RNA病毒的限制有多重要的思维转变提供背景。
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引用次数: 32
Advances in human monoclonal antibody therapy for HBV infection 人单克隆抗体治疗HBV感染的研究进展
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-04-01 DOI: 10.1016/j.coviro.2022.101205
Maxime Beretta , Hugo Mouquet

HBV neutralizing antibodies target the viral envelope antigens (HBsAg) and confer long-term immune protection in vaccinees and infected humans who seroconvert. They recognize various HBsAg epitopes, and can be armed with Fc-dependent effector functions essential for eliminating infected cells and stimulating adaptive immunity. Hundreds of HBsAg-specific monoclonal antibodies (mAbs) were produced from the early 80’s, but it is only recently that bona fide human anti-HBV mAbs were generated from vaccinees and seroconverters. Neutralizing HBV mAbs have in vivo prophylactic and therapeutic efficacy in animal models, and the capacity to decrease antigenemia and viremia in infected humans. Thus, polyfunctional, potent and broad human HBV neutralizing mAbs offer novel opportunities to develop effective interventions to prevent and treat HBV infection. Here, we summarize recent findings on the humoral immune response to HBV, and explore the potential of human HBV neutralizing mAbs as immunotherapeutics to help achieving a functional cure for HBV.

HBV中和抗体靶向病毒包膜抗原(HBsAg),并在疫苗接种者和血清转化的感染者中给予长期免疫保护。它们可以识别各种HBsAg表位,并具有fc依赖的效应功能,这些功能对于消除感染细胞和刺激适应性免疫至关重要。从上世纪80年代初开始,就生产出了数百种hbsag特异性单克隆抗体(mab),但直到最近,才从疫苗接种者和血清转化者身上生产出真正的人抗hbv单克隆抗体。中和型HBV单克隆抗体在动物模型中具有体内预防和治疗效果,并能减少感染者的抗原血症和病毒血症。因此,多功能、强效和广泛的人HBV中和单克隆抗体为开发预防和治疗HBV感染的有效干预措施提供了新的机会。在这里,我们总结了对HBV的体液免疫反应的最新发现,并探索了人类HBV中和单克隆抗体作为免疫治疗药物的潜力,以帮助实现HBV的功能性治愈。
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引用次数: 12
Neutralizing monoclonal antibodies against highly pathogenic coronaviruses 抗高致病性冠状病毒的中和单克隆抗体
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-04-01 DOI: 10.1016/j.coviro.2021.12.015
Rong Xiang , Yang Wang , Lili Wang , Xiaoqian Deng , Shanshan Huo , Shibo Jiang , Fei Yu

The pandemic of Coronavirus Disease 2019 (COVID-19) caused by severe acute respiratory syndrome 2 coronavirus (SARS-CoV-2) is a continuing worldwide threat to human health and social economy. Historically, SARS-CoV-2 follows SARS and MERS as the third coronavirus spreading across borders and continents, but far more dangerous with long-lasting symptomatic consequences. The current situation is strong evidence that coronaviruses will continue to be pathogens of consequence in the future, thus calling for the development of neutralizing antibody-based prophylactics and therapeutics for prevention and treatment of COVID-19 and other human coronavirus diseases. This review summarized the progresses of developing neutralizing monoclonal antibodies against infection of SARS-CoV-2, SARS-CoV, and MERS-CoV, and discussed their potential applications in prevention and treatment of COVID-19 and other human coronavirus diseases.

由严重急性呼吸综合征2型冠状病毒(SARS-CoV-2)引起的2019冠状病毒病(COVID-19)大流行是对人类健康和社会经济的持续全球威胁。从历史上看,SARS- cov -2是继SARS和MERS之后的第三种跨国界和跨大陆传播的冠状病毒,但其危险程度要高得多,会产生长期的症状后果。目前的情况有力地证明,冠状病毒在未来仍将是重要的病原体,因此需要开发基于中和抗体的预防和治疗方法,以预防和治疗COVID-19和其他人类冠状病毒疾病。本文综述了抗SARS-CoV-2、SARS-CoV和MERS-CoV感染的中和性单克隆抗体的研究进展,并讨论了它们在预防和治疗COVID-19和其他人类冠状病毒疾病中的潜在应用。
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引用次数: 3
Monoclonal antibodies against rabies: current uses in prophylaxis and in therapy 抗狂犬病单克隆抗体:目前在预防和治疗中的应用
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-04-01 DOI: 10.1016/j.coviro.2022.101204
Guilherme Dias de Melo , Jan Hellert , Rajesh Gupta , Davide Corti , Hervé Bourhy

Rabies is a severe viral infection that causes an acute encephalomyelitis, which presents a case fatality of nearly 100% after the manifestation of neurological clinical signs. Rabies can be efficiently prevented with post-exposure prophylaxis (PEP), composed of vaccines and anti-rabies immunoglobulins (RIGs); however, no treatment exists for symptomatic rabies. The PEP protocol faces access and implementation obstacles in resource-limited settings, which could be partially overcome by substituting RIGs for monoclonal antibodies (mAbs). mAbs offer lower production costs, consistent supply availability, long-term storage/stability, and an improved safety profile. Here we summarize the key features of the different available mAbs against rabies, focusing on their application in PEP and highlighting their potential in a novel therapeutic approach.

狂犬病是一种严重的病毒感染,可引起急性脑脊髓炎,在出现神经学临床症状后病死率接近100%。狂犬病可通过暴露后预防(PEP)有效预防,由疫苗和抗狂犬病免疫球蛋白(rig)组成;然而,没有治疗狂犬病症状的方法。PEP协议在资源有限的环境中面临准入和实施障碍,可以通过用rig替代单克隆抗体(mab)来部分克服。单克隆抗体具有较低的生产成本、稳定的供应、长期储存/稳定性和更高的安全性。在这里,我们总结了不同的抗狂犬病单抗的主要特点,重点介绍了它们在PEP中的应用,并强调了它们作为一种新的治疗方法的潜力。
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引用次数: 16
Evolution of the interferon response: lessons from ISGs of diverse mammals 干扰素反应的进化:来自不同哺乳动物isg的经验教训
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-04-01 DOI: 10.1016/j.coviro.2022.101202
Matthew B McDougal, Ian N Boys , Pamela De La Cruz-Rivera, John W Schoggins

The vertebrate interferon (IFN) response controls viral infections by inducing hundreds of interferon-stimulated genes (ISGs), many of which encode ‘restriction factors’ that uniquely target certain viruses. ISG studies have historically had a human-centric focus, which is justified because these natural defense mechanisms might be leveraged to treat human viral disease. However, certain mammals are reservoirs for zoonotic viruses that can ‘spill over’ into humans. Additionally, restriction factors have prominent roles in the ongoing evolutionary genetic conflicts between viruses and their hosts. Thus, there is a growing need to understand antiviral IFN/ISG responses in other species, particularly in known reservoirs of zoonotic viruses. This review focuses on functional and evolutionary insight into antiviral IFN responses that have been obtained from studying non-model mammalian species.

脊椎动物干扰素(IFN)反应通过诱导数百个干扰素刺激基因(isg)来控制病毒感染,其中许多基因编码“限制因子”,独特地针对某些病毒。ISG研究历来以人类为中心,这是合理的,因为这些自然防御机制可能被用来治疗人类病毒性疾病。然而,某些哺乳动物是人畜共患病毒的宿主,可以“溢出”到人类身上。此外,限制因子在病毒与其宿主之间持续的进化遗传冲突中起着突出的作用。因此,越来越需要了解其他物种的抗病毒IFN/ISG反应,特别是在已知的人畜共患病毒库中。本文综述了从研究非模式哺乳动物物种中获得的抗病毒IFN反应的功能和进化见解。
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引用次数: 17
A structural view of the SARS-CoV-2 virus and its assembly SARS-CoV-2病毒及其组装的结构视图
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-02-01 DOI: 10.1016/j.coviro.2021.11.011
Nathan J Hardenbrook , Peijun Zhang

The SARS-CoV-2 pandemic that struck in 2019 has left the world crippled with hundreds of millions of cases and millions of people dead. During this time, we have seen unprecedented support and collaboration amongst scientists to respond to this deadly disease. Advances in the field of structural biology, in particular cryoEM and cryo-electron tomography, have allowed unprecedented structural analysis of SARS-CoV-2. Here, we review the structural work on the SARS-CoV-2 virus and viral components, as well as its cellular assembly process, highlighting some important structural findings that have made significant impact on the protection from and treatment of emerging viral infections.

2019年爆发的SARS-CoV-2大流行使世界陷入瘫痪,造成数亿病例和数百万人死亡。在此期间,我们看到科学家们为应对这一致命疾病提供了前所未有的支持和合作。结构生物学领域的进步,特别是低温电子显微镜和低温电子断层扫描,使得对SARS-CoV-2进行前所未有的结构分析成为可能。在此,我们回顾了SARS-CoV-2病毒及其成分及其细胞组装过程的结构工作,重点介绍了一些重要的结构发现,这些发现对新发病毒感染的保护和治疗产生了重大影响。
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引用次数: 34
Editorial overview: Virus bioinformatics - empowering genomics of pathogens, viromes, and the virosphere across divergence scales 编辑概述:病毒生物信息学-增强病原体、病毒组和病毒圈跨差异尺度的基因组学能力
IF 5.9 2区 医学 Q1 Immunology and Microbiology Pub Date : 2022-02-01 DOI: 10.1016/j.coviro.2021.12.001
Alexander E Gorbalenya , Maria Anisimova
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引用次数: 1
期刊
Current opinion in virology
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