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Decoding sound content in the early visual cortex of aphantasic participants. 对幻听者早期视觉皮层中的声音内容进行解码。
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 Epub Date: 2024-10-16 DOI: 10.1016/j.cub.2024.09.008
Belén M Montabes de la Cruz, Clement Abbatecola, Roberto S Luciani, Angus T Paton, Johanna Bergmann, Petra Vetter, Lucy S Petro, Lars F Muckli

Listening to natural auditory scenes leads to distinct neuronal activity patterns in the early visual cortex (EVC) of blindfolded sighted and congenitally blind participants.1,2 This pattern of sound decoding is organized by eccentricity, with the accuracy of auditory information increasing from foveal to far peripheral retinotopic regions in the EVC (V1, V2, and V3). This functional organization by eccentricity is predicted by primate anatomical connectivity,3,4 where cortical feedback projections from auditory and other non-visual areas preferentially target the periphery of early visual areas. In congenitally blind participants, top-down feedback projections to the visual cortex proliferate,5 which might account for even higher sound-decoding accuracy in the EVC compared with blindfolded sighted participants.2 In contrast, studies in participants with aphantasia suggest an impairment of feedback projections to early visual areas, leading to a loss of visual imagery experience.6,7 This raises the question of whether impaired visual feedback pathways in aphantasia also reduce the transmission of auditory information to early visual areas. We presented auditory scenes to 23 blindfolded aphantasic participants. We found overall decreased sound decoding in early visual areas compared to blindfolded sighted ("control") and blind participants. We further explored this difference by modeling eccentricity effects across the blindfolded control, blind, and aphantasia datasets, and with a whole-brain searchlight analysis. Our findings suggest that the feedback of auditory content to the EVC is reduced in aphantasic participants. Reduced top-down projections might lead to both less sound decoding and reduced subjective experience of visual imagery.

1,2这种声音解码模式是按偏心率组织的,听觉信息的准确性从EVC(V1、V2和V3)的眼窝向远周视网膜同位区递增。灵长类动物的解剖连通性3,4 预测了这种按偏心率划分的功能组织,其中来自听觉和其他非视觉区域的皮层反馈投射优先以早期视觉区域的外围为目标。在先天性失明的参与者中,视觉皮层自上而下的反馈投射大量增加5 ,这可能是 EVC 与蒙眼视力正常的参与者相比声音解码准确率更高2 的原因。与此相反,对象皮病参与者的研究表明,早期视觉区域的反馈投射受损,导致视觉意象经验的丧失6,7 。我们向 23 名蒙眼的象患参与者展示了听觉场景。我们发现,与蒙眼的视力正常者("对照组")和盲人相比,早期视觉区域的声音解码能力总体下降。我们通过模拟蒙眼对照组、盲人和象患数据集的偏心率效应,以及全脑探照灯分析,进一步探讨了这种差异。我们的研究结果表明,在象患参与者中,听觉内容对EVC的反馈减少了。自上而下投射的减少可能会导致声音解码和视觉图像主观体验的减少。
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引用次数: 0
Hybridization and inbreeding affect the survival of a critically endangered coral. 杂交和近亲繁殖影响一种极度濒危珊瑚的生存。
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 Epub Date: 2024-10-11 DOI: 10.1016/j.cub.2024.09.035
Alejandra Hernández-Agreda, Joel Huckeba, Katharine E Prata, Mark J A Vermeij, Pim Bongaerts

Coral reefs face escalating pressures leading to unprecedented declines in the populations of reef-building corals.1,2 Conservation genomic studies are critical in understanding and formulating interventions to reverse such declines but thus far have only focused on a handful of broadcast-spawning species in shallow waters.3,4 The recent International Union for Conservation of Nature (IUCN) reclassification of six different brooding corals as "critically endangered"5 indicates that such species are equally threatened. However, we lack a thorough understanding of the factors underlying their decline. Here, we comprehensively examine the genetic impacts of a severe population decline in the brooding coral Helioseris cucullata, once a major contributor to Caribbean reefs but now critically endangered.6,7,8 Genome-wide sequencing of colonies across five locations revealed the presence of two distinct species, indicating that the remaining population sizes are even smaller than previously estimated. Using an exhaustive, spatially explicit sampling approach (across a total of ∼2.5 hectares), we observed extremely low genetic diversity and identified how localized dispersal, excessive inbreeding, and prevalent asexual reproduction may contribute to an extinction vortex. However, we also found evidence for recent hybridization and introgression, providing an avenue for the reintroduction of genetic diversity into both lineages. With many brooding species now under threat, these results highlight the critical need to assess the genetic processes associated with their declines so that these can be harnessed or mitigated to deliver effective conservation outcomes.

珊瑚礁面临着不断升级的压力,导致造礁珊瑚种群数量空前减少。1,2 保护基因组研究对于了解和制定干预措施以扭转这种减少至关重要,但迄今为止,这些研究仅集中在浅水区的少数广布产卵物种上3,4 。最近,世界自然保护联盟(IUCN)将六种不同的产卵珊瑚重新归类为 "极度濒危 "5 ,这表明这些物种同样受到威胁。然而,我们对其衰退的根本原因缺乏透彻的了解。在这里,我们全面研究了曾为加勒比海珊瑚礁做出重要贡献但现在已极度濒危的育雏珊瑚 Helioseris cucullata 种群数量严重下降的遗传影响。利用详尽、空间明确的取样方法(总面积∼2.5 公顷),我们观察到极低的遗传多样性,并确定了局部扩散、过度近亲繁殖和无性繁殖的盛行如何导致灭绝漩涡。不过,我们也发现了近期杂交和引种的证据,为将遗传多样性重新引入这两个品系提供了途径。由于许多育雏物种目前正受到威胁,这些结果凸显了评估与这些物种衰退相关的遗传过程的迫切需要,从而可以利用或减轻这些过程,实现有效的保护结果。
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引用次数: 0
Rapid intracellular acidification is a plant defense response countered by the brown planthopper. 细胞内快速酸化是褐飞虱的一种植物防御反应。
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 Epub Date: 2024-10-14 DOI: 10.1016/j.cub.2024.09.039
Yanjuan Jiang, Xiao-Ya Zhang, Shaoqin Li, Yu-Cheng Xie, Xu-Mei Luo, Yongping Yang, Zhengyan Pu, Li Zhang, Jia-Bao Lu, Hai-Jian Huang, Chuan-Xi Zhang, Sheng Yang He

The brown planthopper (BPH) is the most destructive insect pest in rice. Through a stylet, BPH secretes a plethora of salivary proteins into rice phloem cells as a crucial step of infestation. However, how various salivary proteins function in rice cells to promote insect infestation is poorly understood. Among them, one of the salivary proteins is predicted to be a carbonic anhydrase (Nilaparvata lugens carbonic anhydrase [NlCA]). The survival rate of the NlCA-RNA interference (RNAi) BPH insects was extremely low on rice, indicating a vital role of this salivary protein in BPH infestation. We generated NlCA transgenic rice plants and found that NlCA expressed in rice plants could restore the ability of NlCA-RNAi BPH to survive on rice. Next, we produced rice plants expressing the ratiometric pH sensor pHusion and found that NlCA-RNAi BPH induced rapid intracellular acidification of rice cells during feeding. Further analysis revealed that both NlCA-RNAi BPH feeding and artificial lowering of intracellular pH activated plant defense responses and that NlCA-mediated intracellular pH stabilization is linked to diminished defense responses, including reduced callose deposition at the phloem sieve plates and suppressed defense gene expression. Given the importance of pH homeostasis across the kingdoms of life, discovery of NlCA-mediated intracellular pH modulation uncovered a new dimension in the interaction between plants and piercing/sucking insect pests. The crucial role of NlCA for BPH infestation of rice suggests that NlCA is a promising target for chemical or trans-kingdom RNAi-based inactivation for BPH control strategies in plants.

褐飞虱(BPH)是水稻中最具破坏性的害虫。褐飞虱通过花针向水稻韧皮部细胞分泌大量唾液蛋白,这是虫害的关键步骤。然而,人们对各种唾液蛋白如何在水稻细胞中发挥作用以促进昆虫侵染还知之甚少。其中一种唾液蛋白被认为是碳酸酐酶(Nilaparvata lugens carbonic anhydrase [NlCA])。NlCA-RNA干扰(RNAi)BPH昆虫在水稻上的存活率极低,表明这种唾液蛋白在BPH侵染中起着至关重要的作用。我们培育了 NlCA 转基因水稻植株,发现在水稻植株中表达的 NlCA 可以恢复 NlCA-RNAi BPH 在水稻上的生存能力。接着,我们培育了表达比例 pH 传感器 pHusion 的水稻植株,发现 NlCA-RNAi BPH 在取食过程中会诱导水稻细胞内快速酸化。进一步分析发现,NlCA-RNAi BPH 摄食和人工降低细胞内 pH 都会激活植物防御反应,而 NlCA 介导的细胞内 pH 稳定与防御反应减弱有关,包括韧皮部筛板胼胝质沉积减少和防御基因表达受抑制。鉴于 pH 值平衡在生命界中的重要性,NlCA 介导的细胞内 pH 值调节的发现为植物与穿刺/吸食害虫之间的相互作用揭开了新的篇章。NlCA 对水稻 BPH 侵染的关键作用表明,NlCA 是一个很有希望的靶标,可以通过化学或基于跨生物界 RNAi 的方法使其失活,从而在植物中实施 BPH 控制策略。
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引用次数: 0
Gonzalo Giribet. 贡萨洛-吉里贝特
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 DOI: 10.1016/j.cub.2024.09.065
Gonzalo Giribet

Interview with Gonzalo Giribet, who studies the evolution and biogeography of invertebrate animals at Harvard University.

采访哈佛大学研究无脊椎动物进化和生物地理学的 Gonzalo Giribet。
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引用次数: 0
Parallel maturation of rodent hippocampal memory and CA1 task representations. 啮齿动物海马记忆和 CA1 任务表征的平行成熟。
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 Epub Date: 2024-09-20 DOI: 10.1016/j.cub.2024.08.048
Juraj Bevandić, Federico Stella, H Freyja Ólafsdóttir

Hippocampal-dependent memory is known to emerge late in ontogeny, and its full development is protracted. Yet the changes in hippocampal neuronal function that underlie this delayed and gradual maturation remain relatively unexplored. To address this gap, we recorded ensembles of CA1 neurons while charting the development of hippocampal-dependent spatial working memory (WM) in rat pups (∼2-4 weeks of age). We found a sharp transition in WM development, with age of inflection varying considerably between individual animals. In parallel with the sudden emergence of WM, hippocampal spatial representations became abruptly task specific, remapping between encoding and retrieval phases of the task. Further, we show how the development of task-phase remapping could partly be explained by changes in place-field size during this developmental period as well as the onset of precise temporal coordination of CA1 excitatory input. Together, these results suggest that a hallmark of hippocampal memory development may be the emergence of contextually specific CA1 representations driven by the maturation of CA1 micro-circuits.

众所周知,依赖海马的记忆出现在本体发育的后期,其完全发育是漫长的。然而,海马神经元功能的变化是这种延迟和逐渐成熟的基础,而这种变化相对来说仍未被探索。为了填补这一空白,我们在记录幼鼠(2~4 周龄)依赖海马的空间工作记忆(WM)的发育过程的同时,记录了 CA1 神经元的集合。我们发现,WM 的发展有一个急剧的过渡,不同动物的拐点年龄差异很大。在WM突然出现的同时,海马空间表征也突然变得具有任务特异性,在任务的编码和检索阶段之间进行重映射。此外,我们还展示了任务阶段重映射的发展在一定程度上可以用这一发展时期位置场大小的变化以及CA1兴奋性输入精确时间协调的开始来解释。这些结果表明,海马记忆发展的一个标志可能是在CA1微电路成熟的驱动下,出现了上下文特定的CA1表征。
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引用次数: 0
Mental imagery: The role of primary visual cortex in aphantasia. 心理想象:初级视觉皮层在幻觉症中的作用。
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 DOI: 10.1016/j.cub.2024.09.076
Fraser Milton

The neural underpinnings of aphantasia - a phenomenon where people have an absence of mental imagery - are poorly understood. Two recent studies provide the first direct evidence linking brain activation in primary visual cortex to the imagery deficits in aphantasia.

人们对幻觉症(一种缺乏心理想象的现象)的神经基础知之甚少。最近的两项研究首次提供了直接证据,证明初级视觉皮层的大脑激活与幻象症的意象缺陷有关。
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引用次数: 0
Novel fermentations integrate traditional practice and rational design of fermented-food microbiomes. 新型发酵将传统做法与发酵食品微生物群的合理设计相结合。
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 DOI: 10.1016/j.cub.2024.09.047
Dillon Arrigan, Caroline Isabel Kothe, Angela Oliverio, Joshua D Evans, Benjamin E Wolfe

Fermented foods and beverages have been produced around the world for millennia, providing humans with a range of gastronomic, cultural, health, and scientific benefits. Building on these traditional forms, a convergence of factors, including culinary innovation, globalization, shifts in consumer preferences, and advances in microbiome sciences, has led to the emergence of so-called 'novel fermentations'. In this review, we define novel fermentation as the confluence of traditional food practices and rational microbiome design. Using principles of microbial ecology and evolution, we develop a microbiological framework that outlines several strategies for producing and characterizing novel fermentations, including switching substrates, engrafting target species, assembling whole-community chimeras, and generating novel phenotypes. A subsequent analysis of existing traditional ferments points to gaps in 'fermentation space' where novel ferments could potentially be produced using new combinations of microbes and food substrates. We highlight some important safety and sociocultural issues presented by the repurposing and modification of microbes from traditional ferments that fermented-food producers and microbiologists need to address.

发酵食品和饮料在世界各地的生产已有数千年历史,为人类提供了一系列美食、文化、健康和科学方面的益处。在这些传统形式的基础上,烹饪创新、全球化、消费者偏好的转变以及微生物组科学的进步等因素汇聚在一起,导致了所谓的 "新型发酵 "的出现。在这篇综述中,我们将新型发酵定义为传统食品做法与合理微生物组设计的结合。利用微生物生态学和进化原理,我们建立了一个微生物学框架,概述了生产和鉴定新型发酵的几种策略,包括转换底物、移植目标物种、组装全群落嵌合体以及产生新型表型。随后对现有传统发酵剂的分析指出了 "发酵空间 "的缺口,在这些空间中,利用微生物和食物基质的新组合有可能生产出新型发酵剂。我们强调了发酵食品生产商和微生物学家需要解决的传统发酵剂中微生物的再利用和改造所带来的一些重要的安全和社会文化问题。
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引用次数: 0
Hand and foot morphology maps invasion of terrestrial environments by pterosaurs in the mid-Mesozoic. 手足形态图绘制了中生代翼龙入侵陆地环境的图谱。
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 Epub Date: 2024-10-04 DOI: 10.1016/j.cub.2024.09.014
Robert S H Smyth, Brent H Breithaupt, Richard J Butler, Peter L Falkingham, David M Unwin

Pterosaurs, the first true flying vertebrates, played a crucial role in Mesozoic terrestrial ecosystems. However, our understanding of their ability to move around on the ground and, more broadly, their terrestrial paleoecology remains limited. Here, we demonstrate an unexpectedly high degree of variation in the hands and feet of pterosaurs, comparable with that observed in extant birds. This suggests that pterosaurs were adapted to a remarkably broad range of non-aerial locomotor ecologies. Small, early, long-tailed pterosaurs (non-pterodactyliforms) exhibit extreme modifications in their hand and foot proportions indicative of climbing lifestyles. By contrast, the hands and feet of later, short-tailed pterosaurs (pterodactyliforms) typically exhibit morphologies consistent with more ground-based locomotor ecologies. These changes in proportions correlate with other modifications to pterosaur anatomy, critically, the separation along the midline of the flight membrane (cruropatagium) that linked the hindlimbs, enabling a much more effective locomotory ability on the ground. Together, these changes map a significant event in tetrapod evolution: a mid-Mesozoic colonization of terrestrial environments by short-tailed pterosaurs. This transition to predominantly ground-based locomotor ecologies did not occur as a single event coinciding with the origin of short-tailed forms but evolved independently within each of the four principal radiations: euctenochasmatians, ornithocheiroids, dsungaripteroids, and azhdarchoids. Invasion of terrestrial environments by pterosaurs facilitated the evolution of a wide range of novel feeding ecologies, while the freedom from limitations imposed by climbing permitted an increase in body size, ultimately enabling the evolution of gigantism in multiple lineages.

翼龙是第一种真正意义上的飞行脊椎动物,在中生代陆地生态系统中扮演着至关重要的角色。然而,我们对它们在地面上活动的能力以及更广泛的陆地古生态学的了解仍然有限。在这里,我们展示了翼龙的手和脚出乎意料的高度变异,可与现生鸟类相媲美。这表明翼龙能够适应非常广泛的非空中运动生态环境。小型、早期、长尾翼龙(非翼手龙类)的手和脚的比例表现出极端的变化,表明它们的生活方式是攀爬。相比之下,晚期短尾翼龙(翼手龙类)的手和脚通常表现出与更多地面运动生态相一致的形态。这些比例上的变化与翼龙解剖学上的其他变化相关,关键是连接后肢的飞行膜(cruropatagium)沿中线分离,使翼龙在地面上的运动能力更为有效。这些变化共同映射出四足类进化过程中的一个重要事件:短尾翼龙在中生代开始了对陆地环境的殖民。向以地面运动为主的生态环境的转变并不是与短尾翼龙的起源同时发生的单一事件,而是在四个主要演化阶段中各自独立演化的,这四个演化阶段分别是:短尾翼龙类(euctenochasmatians)、鸟臀翼龙类(ornithocheiroids)、短尾翼龙类(dsungaripteroids)和短尾翼龙类(azdarchoids)。翼龙对陆地环境的入侵促进了各种新的进食生态的进化,而摆脱了攀爬限制的翼龙体型增大,最终在多个品系中实现了巨型化的进化。
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引用次数: 0
Brain and eye movement dynamics track the transition from learning to memory-guided action. 大脑和眼球运动动态追踪从学习到记忆引导行动的过渡。
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 Epub Date: 2024-10-21 DOI: 10.1016/j.cub.2024.09.063
Philipp K Büchel, Janina Klingspohr, Marcel S Kehl, Bernhard P Staresina

Learning never stops. As we navigate life, we continuously acquire and update knowledge to optimize memory-guided action, with a gradual shift from the former to the latter as we master our environment. How are these learning dynamics expressed in the brain and in behavioral patterns? Here, we devised a spatiotemporal image learning task ("Memory Arena") in which participants learn a set of 50 items to criterion across repeated exposure blocks. Critically, brief task-free periods between successive image presentations allowed us to assess multivariate electroencephalogram (EEG) patterns representing the previous and/or upcoming image identity, as well as anticipatory eye movements toward the upcoming image location. As expected, participants eventually met the performance criterion, albeit with different learning rates. During task-free periods, we were able to readily decode representations of both previous and upcoming image identities. Importantly though, decoding strength followed opposing slopes for previous vs. upcoming images across time, with a gradual decline of evidence for the previous image and a gradual increase of evidence for the upcoming image. Moreover, the ratio of upcoming vs. previous image evidence directly followed behavioral learning rates. Finally, eye movement data revealed that participants increasingly used the task-free period to anticipate upcoming image locations, with target-precision slopes paralleling both behavioral performance measures as well as EEG decodability of the upcoming image across time. Together, these results unveil the neural and behavioral dynamics underlying the gradual transition from learning to memory-guided action.

学习永不停歇。我们在生活中不断获取和更新知识,优化以记忆为导向的行动,并在掌握环境的过程中逐渐从前者转向后者。这些学习动态是如何在大脑和行为模式中表现出来的呢?在这里,我们设计了一个时空图像学习任务("记忆竞技场"),让参与者在重复的暴露区块中学习一组 50 个项目的标准。重要的是,在连续图像呈现之间的短暂无任务期间,我们可以评估代表先前和/或即将出现的图像特征的多变量脑电图(EEG)模式,以及对即将出现的图像位置的预期眼动。不出所料,参与者最终都达到了成绩标准,只是学习速度有所不同。在无任务期间,我们能够很容易地解码之前和即将出现的图像特征。但重要的是,解码强度随着时间的推移,先前图像与即将出现图像的解码强度呈相反的斜率,先前图像的证据逐渐减少,而即将出现图像的证据逐渐增加。此外,即将出现的图像与之前图像的证据比例直接与行为学习率相关。最后,眼动数据显示,参与者越来越多地利用无任务期来预测即将出现的图像位置,其目标精确度斜率与行为表现测量以及即将出现图像的脑电图解码性在时间上是平行的。这些结果共同揭示了从学习到记忆指导行动逐渐过渡的神经和行为动态过程。
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引用次数: 0
Incorporating biotic interactions to better model current and future vegetation of the maritime Antarctic. 纳入生物相互作用,更好地模拟当前和未来南极海洋植被。
IF 8.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-04 Epub Date: 2024-10-01 DOI: 10.1016/j.cub.2024.09.011
Bernardo Rocha, Pedro Pinho, Paolo Giordani, Laura Concostrina-Zubiri, Gonçalo Vieira, Pedro Pina, Cristina Branquinho, Paula Matos

Maritime Antarctica's harsh abiotic conditions forged simple terrestrial ecosystems, mostly constituted of bryophytes, lichens, and vascular plants. Though biotic interactions are, together with abiotic factors, thought to help shape this ecosystem, influencing species' distribution and, indirectly, mediating their response to climate, the importance of these interactions is still fairly unknown. We modeled current and future abundance patterns of bryophytes, lichens, and vascular plants, accounting for biotic interactions and abiotic drivers, along a climatic gradient in maritime Antarctica. The influence of regional climate and other drivers was modeled using structural equation models, with and without biotic interactions. Models with biotic interactions performed better; the one offering higher ecological support was used to estimate current and future spatial distributions of vegetation. Results suggest that plants are confined to lower elevations, negatively impacting bryophytes and lichens, whereas at higher elevations both climate and other drivers influence bryophytes and lichens. Our findings strongly support the use of biotic interactions to predict the spatial distribution of Antarctic vegetation.

南极洲海洋严酷的非生物条件造就了简单的陆地生态系统,主要由苔藓植物、地衣和维管植物构成。虽然生物相互作用与非生物因素一起被认为有助于形成这种生态系统,影响物种的分布,并间接地介导它们对气候的反应,但这些相互作用的重要性仍然相当未知。在考虑生物相互作用和非生物驱动因素的情况下,我们沿着南极洲海洋性气候梯度模拟了叶绿体、地衣和维管植物当前和未来的丰度模式。利用结构方程模型对区域气候和其他驱动因素的影响进行了模拟,包括生物相互作用和非生物相互作用。有生物相互作用的模型表现较好;提供较高生态支持的模型被用来估计植被目前和未来的空间分布。结果表明,植物局限于低海拔地区,对红叶植物和地衣产生了负面影响,而在高海拔地区,气候和其他驱动因素都会影响红叶植物和地衣。我们的研究结果有力地支持利用生物相互作用来预测南极植被的空间分布。
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引用次数: 0
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