Pub Date : 2025-01-27DOI: 10.1016/j.cub.2024.12.044
Yunfeng Mao, Mingjun Zhang, Xiaoqi Peng, Yi Liu, Yehao Liu, Qianhui Xia, Bin Luo, Lin Chen, Zhi Zhang, Yuanyin Wang, Haitao Wang
Hyperacusis, exaggerated sensitivity to sound, frequently accompanies chronic pain in humans, suggesting interactions between different sensory systems in the brain. However, the neural mechanisms underlying this comorbidity remain largely unexplored. In this study, behavioral tests measuring sound-evoked pupil dilation and reaction times to lick water following auditory stimuli showed hyperacusis-like behaviors in neuropathic pain model mice. Through viral tracing, fiber photometry, and multi-electrode recordings, we identified glutamatergic projections from primary somatosensory cortex (S1HLGlu) to the auditory cortex (ACx) that participate in amplifying sound-evoked neuronal activity following spared nerve injury in the hindlimb. Chemo- or optogenetic manipulation and electrophysiology recordings confirmed that the S1HLGlu → ACx pathway is essential for this heightened response to sound. Specifically, activating this pathway intensified glutamatergic neuronal activity in the ACx and induced hyperacusis-like behaviors, while chemogenetic suppression reversed these effects in neuropathic pain model mice. These findings illustrate the mechanism by which central gain increases in the ACx of neuropathic pain mice, improving our understanding of cross-modal sensory system interactions and suggesting circuit pathway targets for developing interventions to treat pain-associated hyperacusis in clinic.
{"title":"Cross-modal cortical circuit for sound sensitivity in neuropathic pain.","authors":"Yunfeng Mao, Mingjun Zhang, Xiaoqi Peng, Yi Liu, Yehao Liu, Qianhui Xia, Bin Luo, Lin Chen, Zhi Zhang, Yuanyin Wang, Haitao Wang","doi":"10.1016/j.cub.2024.12.044","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.044","url":null,"abstract":"<p><p>Hyperacusis, exaggerated sensitivity to sound, frequently accompanies chronic pain in humans, suggesting interactions between different sensory systems in the brain. However, the neural mechanisms underlying this comorbidity remain largely unexplored. In this study, behavioral tests measuring sound-evoked pupil dilation and reaction times to lick water following auditory stimuli showed hyperacusis-like behaviors in neuropathic pain model mice. Through viral tracing, fiber photometry, and multi-electrode recordings, we identified glutamatergic projections from primary somatosensory cortex (S1HL<sup>Glu</sup>) to the auditory cortex (ACx) that participate in amplifying sound-evoked neuronal activity following spared nerve injury in the hindlimb. Chemo- or optogenetic manipulation and electrophysiology recordings confirmed that the S1HL<sup>Glu</sup> → ACx pathway is essential for this heightened response to sound. Specifically, activating this pathway intensified glutamatergic neuronal activity in the ACx and induced hyperacusis-like behaviors, while chemogenetic suppression reversed these effects in neuropathic pain model mice. These findings illustrate the mechanism by which central gain increases in the ACx of neuropathic pain mice, improving our understanding of cross-modal sensory system interactions and suggesting circuit pathway targets for developing interventions to treat pain-associated hyperacusis in clinic.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143074082","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-24DOI: 10.1016/j.cub.2024.12.051
Arthur Michaut, Alessandro Mongera, Anupam Gupta, Oscar A Tarazona, Mattia Serra, Georgia-Maria Kefala, Pietro Rigoni, Jong Gwan Lee, Felipe Rivas, Adam R Hall, L Mahadevan, Karine Guevorkian, Olivier Pourquié
The vertebrate bauplan is primarily established via the formation of embryonic tissues in a head-to-tail progression. The mechanics of this elongation, which requires the presomitic mesoderm (PSM), remain poorly understood. Here, we find that avian PSM explants can elongate autonomously when physically confined in vitro, producing a pushing force promoting posterior elongation of the embryo. This tissue elongation is caused by volumetric expansion, which results from an increase in the extracellular fraction accompanied by graded cellular motility. We show that fibroblast growth factor (FGF) signaling promotes glycolysis-dependent production of hyaluronic acid (HA), which is required for expansion of the posterior PSM. Our findings link body axis elongation to tissue expansion through the metabolic control of extracellular matrix production downstream of FGF signaling.
{"title":"Extracellular volume expansion drives vertebrate axis elongation.","authors":"Arthur Michaut, Alessandro Mongera, Anupam Gupta, Oscar A Tarazona, Mattia Serra, Georgia-Maria Kefala, Pietro Rigoni, Jong Gwan Lee, Felipe Rivas, Adam R Hall, L Mahadevan, Karine Guevorkian, Olivier Pourquié","doi":"10.1016/j.cub.2024.12.051","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.051","url":null,"abstract":"<p><p>The vertebrate bauplan is primarily established via the formation of embryonic tissues in a head-to-tail progression. The mechanics of this elongation, which requires the presomitic mesoderm (PSM), remain poorly understood. Here, we find that avian PSM explants can elongate autonomously when physically confined in vitro, producing a pushing force promoting posterior elongation of the embryo. This tissue elongation is caused by volumetric expansion, which results from an increase in the extracellular fraction accompanied by graded cellular motility. We show that fibroblast growth factor (FGF) signaling promotes glycolysis-dependent production of hyaluronic acid (HA), which is required for expansion of the posterior PSM. Our findings link body axis elongation to tissue expansion through the metabolic control of extracellular matrix production downstream of FGF signaling.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143063995","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-24DOI: 10.1016/j.cub.2024.12.043
Gil Zimran, Michal Shpilman, Eve Hobson, Yasuko Kamisugi, Amichai Baichman-Kass, Hong Zhang, Rafa Ruiz-Partida, María R González-Bermúdez, Matan Azar, Erez Feuer, Maayan Gal, Jorge Lozano-Juste, Jan de Vries, Andrew C Cuming, Assaf Mosquna, Yufei Sun
Abscisic acid (ABA) functions as a central regulator of dehydration responses in land plants. As such, ABA signaling was pivotal in facilitating the colonization of terrestrial habitats. The conserved ABA signal transduction module consists of 2C-type protein phosphatases (PP2Cs) and their ABA-triggered inhibitors, PYRABACTIN RESISTANCE 1-like proteins (PYLs). Recent evidence indicates that ABA perception emerged from a latent signaling pathway involving a constitutively PP2C-inhibiting PYL homolog. Consequently, ancestral ABA receptors exerted high background signaling, limiting the dynamic range of ABA-dependent signaling. In angiosperms, ABA receptor families are characteristically large and diverse and include a clade-specific subgroup whose members form homodimers, thereby assuming strict ABA dependency. Here, we show that ABA receptors in mosses originate from an independent expansion, giving rise to three subfamilies. Yeast two-hybrid and in vitro PP2C-inhibition assays indicate that moss PYLs feature low basal activities. However, size-exclusion chromatography and additional lines of evidence suggest that moss PYLs are predominantly monomeric. A combination of mutational analysis with biochemical and physiological assays reveals that the reduced basal activities of moss PYLs are achieved through unique sets of amino acid variations. Finally, introducing causal variations to dimeric receptors dramatically compromises their ABA responsiveness, suggesting that the two evolutionary trajectories are mutually exclusive. Hence, mosses appear to have evolved a parallel mechanism to mitigate the ancestrally high background signal of the core ABA perception apparatus. This convergence highlights the shared imperative of expanding the amplitude of a central, highly adaptive signaling pathway.
{"title":"Abscisic acid receptors functionally converge across 500 million years of land plant evolution.","authors":"Gil Zimran, Michal Shpilman, Eve Hobson, Yasuko Kamisugi, Amichai Baichman-Kass, Hong Zhang, Rafa Ruiz-Partida, María R González-Bermúdez, Matan Azar, Erez Feuer, Maayan Gal, Jorge Lozano-Juste, Jan de Vries, Andrew C Cuming, Assaf Mosquna, Yufei Sun","doi":"10.1016/j.cub.2024.12.043","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.043","url":null,"abstract":"<p><p>Abscisic acid (ABA) functions as a central regulator of dehydration responses in land plants. As such, ABA signaling was pivotal in facilitating the colonization of terrestrial habitats. The conserved ABA signal transduction module consists of 2C-type protein phosphatases (PP2Cs) and their ABA-triggered inhibitors, PYRABACTIN RESISTANCE 1-like proteins (PYLs). Recent evidence indicates that ABA perception emerged from a latent signaling pathway involving a constitutively PP2C-inhibiting PYL homolog. Consequently, ancestral ABA receptors exerted high background signaling, limiting the dynamic range of ABA-dependent signaling. In angiosperms, ABA receptor families are characteristically large and diverse and include a clade-specific subgroup whose members form homodimers, thereby assuming strict ABA dependency. Here, we show that ABA receptors in mosses originate from an independent expansion, giving rise to three subfamilies. Yeast two-hybrid and in vitro PP2C-inhibition assays indicate that moss PYLs feature low basal activities. However, size-exclusion chromatography and additional lines of evidence suggest that moss PYLs are predominantly monomeric. A combination of mutational analysis with biochemical and physiological assays reveals that the reduced basal activities of moss PYLs are achieved through unique sets of amino acid variations. Finally, introducing causal variations to dimeric receptors dramatically compromises their ABA responsiveness, suggesting that the two evolutionary trajectories are mutually exclusive. Hence, mosses appear to have evolved a parallel mechanism to mitigate the ancestrally high background signal of the core ABA perception apparatus. This convergence highlights the shared imperative of expanding the amplitude of a central, highly adaptive signaling pathway.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143074078","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-23DOI: 10.1016/j.cub.2024.12.039
Xiang Li, Robson de Assis Souza, Matthias Heinemann
Yeasts are a diverse group of unicellular fungi that have developed a wide array of phenotypes and traits over 400 million years of evolution. However, we still lack an understanding of the biological principles governing the range of cell morphologies, metabolic modes, and reproductive strategies yeasts display. In this study, we explored the relationship between cell morphology and metabolism in sixteen yeast strains across eleven species. We performed a quantitative analysis of the physiology and morphology of these strains and discovered a strong correlation between the glucose uptake rate (GUR) and the surface-area-to-volume ratio. 14C-glucose uptake experiments demonstrated that the GUR for a given strain is governed either by glucose transport capacity or glycolytic rate, indicating that it is rather the rate of glucose metabolism in general that correlates with cell morphology. Furthermore, perturbations in glucose metabolism influenced cell sizes, whereas manipulating cell size did not affect GUR, suggesting that glucose metabolism determines cell size rather than the reverse. Across the strains tested, we also found that the rate of glucose metabolism influenced ethanol production rate, biomass yield, and carbon dioxide transfer rate. Overall, our findings demonstrate that the rate of glucose metabolism is a key factor shaping yeast cell morphology and physiology, offering new insights into the fundamental principles of yeast biology.
{"title":"The rate of glucose metabolism sets the cell morphology across yeast strains and species.","authors":"Xiang Li, Robson de Assis Souza, Matthias Heinemann","doi":"10.1016/j.cub.2024.12.039","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.039","url":null,"abstract":"<p><p>Yeasts are a diverse group of unicellular fungi that have developed a wide array of phenotypes and traits over 400 million years of evolution. However, we still lack an understanding of the biological principles governing the range of cell morphologies, metabolic modes, and reproductive strategies yeasts display. In this study, we explored the relationship between cell morphology and metabolism in sixteen yeast strains across eleven species. We performed a quantitative analysis of the physiology and morphology of these strains and discovered a strong correlation between the glucose uptake rate (GUR) and the surface-area-to-volume ratio. <sup>14</sup>C-glucose uptake experiments demonstrated that the GUR for a given strain is governed either by glucose transport capacity or glycolytic rate, indicating that it is rather the rate of glucose metabolism in general that correlates with cell morphology. Furthermore, perturbations in glucose metabolism influenced cell sizes, whereas manipulating cell size did not affect GUR, suggesting that glucose metabolism determines cell size rather than the reverse. Across the strains tested, we also found that the rate of glucose metabolism influenced ethanol production rate, biomass yield, and carbon dioxide transfer rate. Overall, our findings demonstrate that the rate of glucose metabolism is a key factor shaping yeast cell morphology and physiology, offering new insights into the fundamental principles of yeast biology.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143064171","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-23DOI: 10.1016/j.cub.2024.12.042
Lasse Jakobsen, Danuta M Wisniewska, Felix T Häfele, Josephine T Rajaeasparan, Julie B Nielsen, John M Ratcliffe
Moving animals must gather information at sufficient rates, detail, and range relative to their velocity while filtering this information to that essential for a given task.1,2 Echolocators, because of their active sensory system, are exceptional models for investigating how animals filter and adjust information flow to motor patterns.3,4 During airborne prey capture, bats adjust echolocation and, by extension, how they probe for information in distance- and context-dependent ways.5,6,7 We investigated how sensory probing guides movement and how niche specializations shape strategies to integrate information acquisition and motion velocity. Specifically, we recorded three sympatric bats of the same foraging guild (edge-space hawkers), but different niches, as they intercepted airborne prey under identical conditions. When hawking, we find that the trawler, Myotis daubentonii, and the hawker, Pipistrellus pygmaeus, exhibit similar flight and echolocation behavior, whereas the gleaner, M. nattereri, flies slower and produces calls of lower duration and intensity, greater bandwidth and call interval, but similar beam breadth. Strikingly, these differences in echolocation behavior converge when accounting for flight speed. We show that these species move equivalent distances between call emissions and that all bats travel through their respective sonar ranges in the same time interval. Further, each echolocation call's duration is related to the two-way travel time of its sonar range, and thus velocity, the same way across species. The similarity in how these bats sample their environment relative to velocity suggests general mechanisms of information processing and conserved traits underlying auditory attention in vespertilionid bats and, perhaps, other echolocators.
{"title":"Velocity as an overlooked driver in the echolocation behavior of aerial hawking vespertilionid bats.","authors":"Lasse Jakobsen, Danuta M Wisniewska, Felix T Häfele, Josephine T Rajaeasparan, Julie B Nielsen, John M Ratcliffe","doi":"10.1016/j.cub.2024.12.042","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.042","url":null,"abstract":"<p><p>Moving animals must gather information at sufficient rates, detail, and range relative to their velocity while filtering this information to that essential for a given task.<sup>1</sup><sup>,</sup><sup>2</sup> Echolocators, because of their active sensory system, are exceptional models for investigating how animals filter and adjust information flow to motor patterns.<sup>3</sup><sup>,</sup><sup>4</sup> During airborne prey capture, bats adjust echolocation and, by extension, how they probe for information in distance- and context-dependent ways.<sup>5</sup><sup>,</sup><sup>6</sup><sup>,</sup><sup>7</sup> We investigated how sensory probing guides movement and how niche specializations shape strategies to integrate information acquisition and motion velocity. Specifically, we recorded three sympatric bats of the same foraging guild (edge-space hawkers), but different niches, as they intercepted airborne prey under identical conditions. When hawking, we find that the trawler, Myotis daubentonii, and the hawker, Pipistrellus pygmaeus, exhibit similar flight and echolocation behavior, whereas the gleaner, M. nattereri, flies slower and produces calls of lower duration and intensity, greater bandwidth and call interval, but similar beam breadth. Strikingly, these differences in echolocation behavior converge when accounting for flight speed. We show that these species move equivalent distances between call emissions and that all bats travel through their respective sonar ranges in the same time interval. Further, each echolocation call's duration is related to the two-way travel time of its sonar range, and thus velocity, the same way across species. The similarity in how these bats sample their environment relative to velocity suggests general mechanisms of information processing and conserved traits underlying auditory attention in vespertilionid bats and, perhaps, other echolocators.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143074084","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-23DOI: 10.1016/j.cub.2024.12.041
Gulnara Tagirdzhanova, Klara Scharnagl, Neha Sahu, Xia Yan, Angus Bucknell, Adam R Bentham, Clara Jégousse, Sandra Lorena Ament-Velásquez, Ioana Onuț-Brännström, Hanna Johannesson, Dan MacLean, Nicholas J Talbot
Lichens are composite, symbiotic associations of fungi, algae, and bacteria that result in large, anatomically complex organisms adapted to many of the world's most challenging environments. How such intricate, self-replicating lichen architectures develop from simple microbial components remains unknown because of their recalcitrance to experimental manipulation. Here, we report a metagenomic and metatranscriptomic analysis of the lichen Xanthoria parietina at different developmental stages. We identified 168 genomes of symbionts and lichen-associated microbes across the sampled thalli, including representatives of green algae, three different classes of fungi, and 14 bacterial phyla. By analyzing the occurrence of individual species across lichen thalli from diverse environments, we defined both substrate-specific and core microbial components of the lichen. Metatranscriptomic analysis of the principal fungal symbiont from three different developmental stages of a lichen, compared with axenically grown fungus, revealed differential gene expression profiles indicative of lichen-specific transporter functions, specific cell signaling, transcriptional regulation, and secondary metabolic capacity. Putative immunity-related proteins and lichen-specific structurally conserved secreted proteins resembling fungal pathogen effectors were also identified, consistent with a role for immunity modulation in lichen morphogenesis.
{"title":"Complexity of the lichen symbiosis revealed by metagenome and transcriptome analysis of Xanthoria parietina.","authors":"Gulnara Tagirdzhanova, Klara Scharnagl, Neha Sahu, Xia Yan, Angus Bucknell, Adam R Bentham, Clara Jégousse, Sandra Lorena Ament-Velásquez, Ioana Onuț-Brännström, Hanna Johannesson, Dan MacLean, Nicholas J Talbot","doi":"10.1016/j.cub.2024.12.041","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.041","url":null,"abstract":"<p><p>Lichens are composite, symbiotic associations of fungi, algae, and bacteria that result in large, anatomically complex organisms adapted to many of the world's most challenging environments. How such intricate, self-replicating lichen architectures develop from simple microbial components remains unknown because of their recalcitrance to experimental manipulation. Here, we report a metagenomic and metatranscriptomic analysis of the lichen Xanthoria parietina at different developmental stages. We identified 168 genomes of symbionts and lichen-associated microbes across the sampled thalli, including representatives of green algae, three different classes of fungi, and 14 bacterial phyla. By analyzing the occurrence of individual species across lichen thalli from diverse environments, we defined both substrate-specific and core microbial components of the lichen. Metatranscriptomic analysis of the principal fungal symbiont from three different developmental stages of a lichen, compared with axenically grown fungus, revealed differential gene expression profiles indicative of lichen-specific transporter functions, specific cell signaling, transcriptional regulation, and secondary metabolic capacity. Putative immunity-related proteins and lichen-specific structurally conserved secreted proteins resembling fungal pathogen effectors were also identified, consistent with a role for immunity modulation in lichen morphogenesis.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143074080","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-22DOI: 10.1016/j.cub.2024.12.023
Hua Wang, Victor Caetano-Andrade, Nicole Boivin, Charles R Clement, Wellyngton Espindola Ayala, Ramiro Dario Melinski, Francislaide da Silva Costa, Detlef Weigel, Patrick Roberts
The Amazon rainforest is characterized by a limited number of hyperdominant trees that play an oversized role in its ecosystems, nutrient cycle, and rainfall production. Some of these, such as the Brazil nut, appear to have been intensively exploited and dispersed by Indigenous populations since their earliest arrival in this part of South America around 13,000 years ago. However, the genetic diversity-and geographic structure-of these species remains poorly understood, as does their exact relationship with past human land use. We use a new genome assembly for Brazil nut to analyze 270 individuals sampled at areas with varying intensities of archaeological evidence. We demonstrate that overall low genetic diversity, with a notable decrease since the Late Pleistocene, is accompanied by significant geographic structure, where evidence for improved gene flow and regeneration by long-term traditional human management is linked to increased genetic diversity. We argue that historical perspectives on the genetic diversity of key tree species, such as the Brazil nut, can support the development of more active management strategies today.
{"title":"Long-term human influence on the demography and genetic diversity of the hyperdominant Bertholletia excelsa in the Amazon Basin.","authors":"Hua Wang, Victor Caetano-Andrade, Nicole Boivin, Charles R Clement, Wellyngton Espindola Ayala, Ramiro Dario Melinski, Francislaide da Silva Costa, Detlef Weigel, Patrick Roberts","doi":"10.1016/j.cub.2024.12.023","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.023","url":null,"abstract":"<p><p>The Amazon rainforest is characterized by a limited number of hyperdominant trees that play an oversized role in its ecosystems, nutrient cycle, and rainfall production. Some of these, such as the Brazil nut, appear to have been intensively exploited and dispersed by Indigenous populations since their earliest arrival in this part of South America around 13,000 years ago. However, the genetic diversity-and geographic structure-of these species remains poorly understood, as does their exact relationship with past human land use. We use a new genome assembly for Brazil nut to analyze 270 individuals sampled at areas with varying intensities of archaeological evidence. We demonstrate that overall low genetic diversity, with a notable decrease since the Late Pleistocene, is accompanied by significant geographic structure, where evidence for improved gene flow and regeneration by long-term traditional human management is linked to increased genetic diversity. We argue that historical perspectives on the genetic diversity of key tree species, such as the Brazil nut, can support the development of more active management strategies today.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143037600","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-22DOI: 10.1016/j.cub.2024.12.040
Justin Van Goor, Asan Turdiev, Savannah J Speir, Jillian Manning, Eric S Haag
Sperm competition is found across multicellular organisms1,2,3,4 using both external and internal fertilization.5,6 Sperm competition and post-copulatory cryptic female choice can promote incompatibility between species due to the antagonistic coevolution of the sexes within a species.7,8,9,10,11 This between-species incompatibility is accelerated and markedly asymmetrical when sexual mode differs, producing the "weak inbreeder, strong outcrosser" (WISO) pattern.12 Here, we show that male secreted short (MSS) sperm glycoproteins of nematodes constitute a gametic effector of WISO. In obligately outcrossing Caenorhabditis, MSS is dispensable for baseline fertility but required for intraspecific sperm competitiveness.13 MSS is lost in self-fertile lineages, likely as a response to selection for a hermaphrodite-biased sex ratio.14 Selfing hermaphrodites that mate with males of closely related outcrossing species are rapidly sterilized due to ovarian sperm invasion.11 The simplification of the male proteome in selfing species suggests that many factors could contribute to invasivity.13,15,16 However, restoration of just MSS to the self-fertile C. briggsae is sufficient to induce mild invasivity. Further, MSS+ sperm appear to derive their competitive advantage from this behavior, directly linking interspecies incompatibility with intraspecific competition. MSS-related proteins (MSRPs) remaining in the C. briggsae genome are similar in structure, expression, and localization to MSS but are not necessary for normal sperm competitiveness. Further, overexpression of the MSRP most similar to MSS, Cbr-MSRP-3, is insufficient to enhance competitiveness. We conclude that outcrossing species retain sperm competition factors that contribute to their reproductive isolation from selfing relatives that lost them.
{"title":"Male secreted short glycoproteins link sperm competition to the reproductive isolation of species.","authors":"Justin Van Goor, Asan Turdiev, Savannah J Speir, Jillian Manning, Eric S Haag","doi":"10.1016/j.cub.2024.12.040","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.040","url":null,"abstract":"<p><p>Sperm competition is found across multicellular organisms<sup>1</sup><sup>,</sup><sup>2</sup><sup>,</sup><sup>3</sup><sup>,</sup><sup>4</sup> using both external and internal fertilization.<sup>5</sup><sup>,</sup><sup>6</sup> Sperm competition and post-copulatory cryptic female choice can promote incompatibility between species due to the antagonistic coevolution of the sexes within a species.<sup>7</sup><sup>,</sup><sup>8</sup><sup>,</sup><sup>9</sup><sup>,</sup><sup>10</sup><sup>,</sup><sup>11</sup> This between-species incompatibility is accelerated and markedly asymmetrical when sexual mode differs, producing the \"weak inbreeder, strong outcrosser\" (WISO) pattern.<sup>12</sup> Here, we show that male secreted short (MSS) sperm glycoproteins of nematodes constitute a gametic effector of WISO. In obligately outcrossing Caenorhabditis, MSS is dispensable for baseline fertility but required for intraspecific sperm competitiveness.<sup>13</sup> MSS is lost in self-fertile lineages, likely as a response to selection for a hermaphrodite-biased sex ratio.<sup>14</sup> Selfing hermaphrodites that mate with males of closely related outcrossing species are rapidly sterilized due to ovarian sperm invasion.<sup>11</sup> The simplification of the male proteome in selfing species suggests that many factors could contribute to invasivity.<sup>13</sup><sup>,</sup><sup>15</sup><sup>,</sup><sup>16</sup> However, restoration of just MSS to the self-fertile C. briggsae is sufficient to induce mild invasivity. Further, MSS+ sperm appear to derive their competitive advantage from this behavior, directly linking interspecies incompatibility with intraspecific competition. MSS-related proteins (MSRPs) remaining in the C. briggsae genome are similar in structure, expression, and localization to MSS but are not necessary for normal sperm competitiveness. Further, overexpression of the MSRP most similar to MSS, Cbr-MSRP-3, is insufficient to enhance competitiveness. We conclude that outcrossing species retain sperm competition factors that contribute to their reproductive isolation from selfing relatives that lost them.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143064163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-22DOI: 10.1016/j.cub.2024.12.053
Joel A Heath, Natalie Cooper, Paul Upchurch, Philip D Mannion
Dinosaurs dominated Mesozoic terrestrial ecosystems for ∼160 million years, but their biogeographic origin remains poorly understood. The earliest unequivocal dinosaur fossils appear in the Carnian (∼230 Ma) of southern South America and Africa, leading most authors to propose southwestern Gondwana as the likely center of origin. However, the high taxonomic and morphological diversity of these earliest assemblages suggests a more ancient evolutionary history that is currently unsampled. Phylogenetic uncertainty at the base of Dinosauria, combined with the subsequent appearance of dinosaurs throughout Laurasia in their early evolutionary history, further complicates this picture. Here, we estimate the distribution of early dinosaurs and their archosaurian relatives under a phylogenetic maximum likelihood framework, testing alternative topological arrangements and incorporating potential abiotic barriers to dispersal into our biogeographic models. For the first time, we include spatiotemporal sampling heterogeneity in these models, which frequently supports a low-latitude Gondwanan origin for dinosaurs. These results are best supported when silesaurids are constrained as early-diverging ornithischians, which is likely because this topology accounts for the otherwise substantial ornithischian ghost lineage, explaining the group's absence from the fossil record prior to the Early Jurassic. Our results suggest that the archosaur radiation also took place within low-latitude Gondwana following the end-Permian extinction before lineages dispersed across Pangaea into ecologically and climatically distinct provinces during the Late Triassic. Mesozoic terrestrial vertebrates are under-sampled at low paleolatitudes, and our findings suggest that heterogeneous sampling has hitherto obscured the true paleobiogeographic origin of dinosaurs and their kin.
{"title":"Accounting for sampling heterogeneity suggests a low paleolatitude origin for dinosaurs.","authors":"Joel A Heath, Natalie Cooper, Paul Upchurch, Philip D Mannion","doi":"10.1016/j.cub.2024.12.053","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.053","url":null,"abstract":"<p><p>Dinosaurs dominated Mesozoic terrestrial ecosystems for ∼160 million years, but their biogeographic origin remains poorly understood. The earliest unequivocal dinosaur fossils appear in the Carnian (∼230 Ma) of southern South America and Africa, leading most authors to propose southwestern Gondwana as the likely center of origin. However, the high taxonomic and morphological diversity of these earliest assemblages suggests a more ancient evolutionary history that is currently unsampled. Phylogenetic uncertainty at the base of Dinosauria, combined with the subsequent appearance of dinosaurs throughout Laurasia in their early evolutionary history, further complicates this picture. Here, we estimate the distribution of early dinosaurs and their archosaurian relatives under a phylogenetic maximum likelihood framework, testing alternative topological arrangements and incorporating potential abiotic barriers to dispersal into our biogeographic models. For the first time, we include spatiotemporal sampling heterogeneity in these models, which frequently supports a low-latitude Gondwanan origin for dinosaurs. These results are best supported when silesaurids are constrained as early-diverging ornithischians, which is likely because this topology accounts for the otherwise substantial ornithischian ghost lineage, explaining the group's absence from the fossil record prior to the Early Jurassic. Our results suggest that the archosaur radiation also took place within low-latitude Gondwana following the end-Permian extinction before lineages dispersed across Pangaea into ecologically and climatically distinct provinces during the Late Triassic. Mesozoic terrestrial vertebrates are under-sampled at low paleolatitudes, and our findings suggest that heterogeneous sampling has hitherto obscured the true paleobiogeographic origin of dinosaurs and their kin.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143037587","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-21DOI: 10.1016/j.cub.2024.12.037
Clément Boussardon, Matthieu Simon, Chris Carrie, Matthew Fuszard, Etienne H Meyer, Françoise Budar, Olivier Keech
To propagate their genetic material, flowering plants rely on the production of large amounts of pollen grains that are capable of germinating on a compatible stigma. Pollen germination and pollen tube growth are thought to be extremely energy-demanding processes. This raises the question of whether mitochondria from pollen grains are specifically tuned to support this developmental process. To address this question, we isolated mitochondria from both mature pollen and floral buds using the isolation of mitochondria tagged in specific cell-type (IMTACT) strategy and examined their respective proteomes. Strikingly, mitochondria from mature pollen grains have lost many proteins required for genome maintenance, gene expression, and translation. Conversely, a significant accumulation of proteins associated with the tricarboxylic acid (TCA) cycle, the electron transport chain (ETC), and Ca2+ homeostasis was observed. This supports the current model in which pollen requires large quantities of ATP for tube growth but also identifies an unexpected depletion of the gene expression machinery, aligned with the fact that the mitochondrial genome is actively degraded during pollen maturation. Altogether, our results uncover that mitochondria from mature pollen grains are strategically prepared for action by increasing their respiratory capacity and dismantling their gene expression machinery, which raises new questions about the assembly of respiratory complexes in pollen mitochondria, as they rely on the integration of proteins coded by the nuclear and mitochondrial genomes. In addition, the approach described here opens a new range of possibilities for studying mitochondria during pollen development and in pollen-specific mitochondrial events.
{"title":"The atypical proteome of mitochondria from mature pollen grains.","authors":"Clément Boussardon, Matthieu Simon, Chris Carrie, Matthew Fuszard, Etienne H Meyer, Françoise Budar, Olivier Keech","doi":"10.1016/j.cub.2024.12.037","DOIUrl":"https://doi.org/10.1016/j.cub.2024.12.037","url":null,"abstract":"<p><p>To propagate their genetic material, flowering plants rely on the production of large amounts of pollen grains that are capable of germinating on a compatible stigma. Pollen germination and pollen tube growth are thought to be extremely energy-demanding processes. This raises the question of whether mitochondria from pollen grains are specifically tuned to support this developmental process. To address this question, we isolated mitochondria from both mature pollen and floral buds using the isolation of mitochondria tagged in specific cell-type (IMTACT) strategy and examined their respective proteomes. Strikingly, mitochondria from mature pollen grains have lost many proteins required for genome maintenance, gene expression, and translation. Conversely, a significant accumulation of proteins associated with the tricarboxylic acid (TCA) cycle, the electron transport chain (ETC), and Ca<sup>2+</sup> homeostasis was observed. This supports the current model in which pollen requires large quantities of ATP for tube growth but also identifies an unexpected depletion of the gene expression machinery, aligned with the fact that the mitochondrial genome is actively degraded during pollen maturation. Altogether, our results uncover that mitochondria from mature pollen grains are strategically prepared for action by increasing their respiratory capacity and dismantling their gene expression machinery, which raises new questions about the assembly of respiratory complexes in pollen mitochondria, as they rely on the integration of proteins coded by the nuclear and mitochondrial genomes. In addition, the approach described here opens a new range of possibilities for studying mitochondria during pollen development and in pollen-specific mitochondrial events.</p>","PeriodicalId":11359,"journal":{"name":"Current Biology","volume":" ","pages":""},"PeriodicalIF":8.1,"publicationDate":"2025-01-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143064179","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}