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Assessing the combined effect of surface topography and substrate rigidity in human bone marrow stem cell cultures 评估人骨髓干细胞培养中表面形貌和基质硬度的综合影响
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-09-13 DOI: 10.1002/elsc.202200029
Sofia Ribeiro, Eugenia Pugliese, Stefanie H. Korntner, Emanuel M. Fernandes, Manuela E. Gomes, Rui L. Reis, Alan O'Riordan, Yves Bayon, Dimitrios I. Zeugolis

The combined effect of surface topography and substrate rigidity in stem cell cultures is still under-investigated, especially when biodegradable polymers are used. Herein, we assessed human bone marrow stem cell response on aliphatic polyester substrates as a function of anisotropic grooved topography and rigidity (7 and 12 kPa). Planar tissue culture plastic (TCP, 3 GPa) and aliphatic polyester substrates were used as controls. Cell morphology analysis revealed that grooved substrates caused nuclei orientation/alignment in the direction of the grooves. After 21 days in osteogenic and chondrogenic media, the 3 GPa TCP and the grooved 12 kPa substrate induced significantly higher calcium deposition and alkaline phosphatase (ALP) activity and glycosaminoglycan (GAG) deposition, respectively, than the other groups. After 14 days in tenogenic media, the 3 GPa TCP upregulated four and downregulated four genes; the planar 7 kPa substrate upregulated seven genes and downregulated one gene; and the grooved 12 kPa substrate upregulated seven genes and downregulated one gene. After 21 days in adipogenic media, the softest (7 kPa) substrates induced significantly higher oil droplet deposition than the other substrates and the grooved substrate induced significantly higher droplet deposition than the planar. Our data pave the way for more rational design of bioinspired constructs.

在干细胞培养中,表面形貌和基质硬度的综合影响仍有待研究,特别是当使用可生物降解聚合物时。在此,我们评估了人类骨髓干细胞在脂肪族聚酯基质上的反应,作为各向异性沟槽地形和刚度(7和12 kPa)的函数。以平面组织培养塑料(TCP, 3gpa)和脂肪族聚酯为对照。细胞形态学分析表明,沟槽基质使细胞核向沟槽方向取向/排列。在成骨和软骨培养基中培养21 d后,3 GPa TCP和12 kPa沟槽底物诱导的钙沉积、碱性磷酸酶(ALP)活性和糖胺聚糖(GAG)沉积均显著高于其他各组。在致衰老培养基中培养14天后,3gpa TCP上调和下调4个基因;平面7 kPa底物上调7个基因,下调1个基因;沟槽型12kpa底物上调7个基因,下调1个基因。在成脂培养基中培养21天后,最软底物(7 kPa)诱导的油滴沉积显著高于其他底物,沟槽底物诱导的油滴沉积显著高于平面底物。我们的数据为更合理地设计生物启发结构铺平了道路。
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引用次数: 2
Preparation of a pH-responsive chitosan-montmorillonite-nitrogen-doped carbon quantum dots nanocarrier for attenuating doxorubicin limitations in cancer therapy ph响应壳聚糖-蒙脱石-氮掺杂碳量子点纳米载体的制备以减弱阿霉素在癌症治疗中的局限性
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-09-13 DOI: 10.1002/elsc.202200016
Erfan Rahmani, Mehrab Pourmadadi, Sohrab Ali Ghorbanian, Fatemeh Yazdian, Hamid Rashedi, Mona Navaee

Despite its widespread usage as a chemotherapy drug in cancer treatment, doxorubicin (DOX) has limitations such as short in vivo circulation time, low solubility, and poor permeability. In this regard, a pH-responsive chitosan (CS)- montmorillonite (MMT)- nitrogen-doped carbon quantum dots (NCQDs) nanocomposite was first developed, loaded with DOX, and then incorporated into a double emulsion to further develop the sustained release. The incorporated NCQDs into the CS-MMT hydrogel exhibited enhanced loading and entrapment efficiencies. The presence of NCQDs nanoparticles in the CS-MMT hydrogel also resulted in an extended pH-responsive release of DOX over a period of 96 h compared to that of CS-MMT-DOX nanocarriers at pH 5.4. Based on the Korsmeyer-Peppas model, there was a controlled DOX release at pH 5.4, while no diffusion was observed at pH 7.4, indicating fewer side effects. MTT assay showed that the cytotoxicity of DOX-loaded CS-MMT-NCQDs hydrogel nanocomposite was significantly higher than those of free DOX (p < 0.001) and CS-MMT-NCQDs (p < 0.001) on MCF-7 cells. Flow cytometry results demonstrated that a higher apoptosis induction achieved after incorporating NCQDs nanoparticles into CS-MMT-DOX nanocarrier. These findings suggest that the DOX-loaded nanocomposite is a promising candidate for the targeted treatment of cancer cells.

多柔比星(DOX)作为化疗药物广泛应用于癌症治疗,但存在体内循环时间短、溶解度低、渗透性差等局限性。为此,首先制备了ph响应型壳聚糖(CS)-蒙脱土(MMT)-氮掺杂碳量子点(NCQDs)纳米复合材料,负载DOX,然后将其掺入双乳液中进一步发展缓释。将NCQDs加入到CS-MMT水凝胶中,显示出更高的负载和捕集效率。与CS-MMT-DOX纳米载体相比,CS-MMT水凝胶中NCQDs纳米颗粒的存在也导致DOX在pH值为5.4时的pH响应释放时间延长了96小时。根据Korsmeyer-Peppas模型,pH为5.4时DOX释放受控制,而pH为7.4时未观察到扩散,表明副作用较少。MTT实验表明,负载DOX的CS-MMT-NCQDs水凝胶纳米复合材料的细胞毒性显著高于游离DOX (p <0.001)和CS-MMT-NCQDs (p <0.001)对MCF-7细胞的影响。流式细胞术结果表明,将NCQDs纳米颗粒加入CS-MMT-DOX纳米载体后,细胞凋亡诱导率更高。这些发现表明,负载dox的纳米复合材料是一种有希望的靶向治疗癌细胞的候选材料。
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引用次数: 46
Cover Picture: Engineering in Life Sciences 9'22 封面图片:生命科学工程9’22
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-09-05 DOI: 10.1002/elsc.202270091
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引用次数: 0
Issue Information 问题信息
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-09-01 DOI: 10.1111/nuf.12612
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引用次数: 0
Effect of metals on the regulation of acidogenic metabolism enhancing biohydrogen and carboxylic acids production from brewery spent grains: Microbial dynamics and biochemical analysis 金属对酿酒酒糟产酸代谢促进产氢和羧酸的影响:微生物动力学和生化分析
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-08-30 DOI: 10.1002/elsc.202200030
Omprakash Sarkar, Ulrika Rova, Paul Christakopoulos, Leonidas Matsakas

The present study reports the mixed culture acidogenic production of biohydrogen and carboxylic acids (CA) from brewery spent grains (BSG) in the presence of high concentrations of cobalt, iron, nickel, and zinc. The metals enhanced biohydrogen output by 2.39 times along with CA biosynthesis by 1.73 times. Cobalt and iron promoted the acetate and butyrate pathways, leading to the accumulation of 5.14 gCOD/L of acetic and 11.36 gCOD/L of butyric acid. The production of solvents (ethanol + butanol) was higher with zinc (4.68 gCOD/L) and cobalt (4.45 gCOD/L). A combination of all four metals further enhanced CA accumulation to 42.98 gCOD/L, thus surpassing the benefits accrued from supplementation with individual metals. Additionally, 0.36 and 0.31 mol green ammonium were obtained from protein-rich brewery spent grain upon supplementation with iron and cobalt, respectively. Metagenomic analysis revealed the high relative abundance of Firmicutes (>90%), of which 85.02% were Clostridium, in mixed metal-containing reactors. Finally, a significant correlation of dehydrogenase activity with CA and biohydrogen evolution was observed upon metal addition.

本研究报道了在高浓度钴、铁、镍和锌存在的情况下,从啤酒废谷物(BSG)中产生生物氢和羧酸(CA)的混合培养。金属使生物氢产量提高了2.39倍,CA生物合成提高了1.73倍。钴和铁促进了乙酸和丁酸途径,导致乙酸和丁酸积累分别为5.14 gCOD/L和11.36 gCOD/L。锌(4.68 gCOD/L)和钴(4.45 gCOD/L)的溶剂(乙醇+丁醇)产量较高。这四种金属的组合进一步提高了CA积累量,达到42.98 gCOD/L,从而超过了补充单个金属所带来的益处。添加铁和钴后,富蛋白啤酒废粮的绿铵含量分别为0.36 mol和0.31 mol。宏基因组分析显示,在混合含金属反应器中,厚壁菌门的相对丰度较高(>90%),其中梭状芽孢杆菌的丰度为85.02%。最后,在添加金属后,脱氢酶活性与CA和生物氢析出有显著的相关性。
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引用次数: 3
Evaluation of SDS-coated iron nanostructure on the gene expression of bio surfactant-producing genes by Pseudomonas aeruginosa SDS包被铁纳米结构对铜绿假单胞菌产生生物表面活性剂基因表达的影响
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-08-24 DOI: 10.1002/elsc.202200002
Yaser Ahsani Arani, Zahra Noormohammadi, Behnam Rasekh, Fatemeh Yazdian, Hojjat kazemi

Bio surfactants are natural surfactants that induce emulsification, displacement, increased solubility, and mobility of hydrophobic organic compounds. In this study, the gene expression of biosurfactant production genes by Pseudomonas aeruginosa in the presence of sodium dodecyl sulfate coated iron nanostructure (Fe/SDS) were evaluated. Emulsification Index and Surface Tension reduction test to check stability and emulsification the rhamnolipid were done. Purification was evaluated using thin layer chromatography (TLC) and expression of rhlA, mvfR, lasR, rhlR genes was determined using q-PCR technique. Binding of nanoparticles to bio surfactants was confirmed by TEM. The best emulsification index, was by the sample that exposed to 1 mg/L Fe/SDS nanoparticles for 2 days. Rhamnolipid produced in the presence of nanoparticles had an acceptable ability to reduce surface tension. The Rf (retention factor) value obtained was 0.63 by chromatography. q-PCR results showed that the expression of rhlA, mvfR, lasR, rhlR genes was significantly increased in Fe/SDS treated cells, which indicates the significant positive effect (P < 0.05) of nanoparticles on biosurfactant production of treated cells. While, SDS and Fe alone were not affected significantly (P > 0.05) on the expression of these genes. Our findings indicated the importance of nanoparticles in increasing the expression of genes involved in the bio surfactant production pathway of Pseudomonas aeruginosa.

生物表面活性剂是一种天然表面活性剂,可诱导疏水性有机化合物的乳化、置换、增加溶解度和流动性。在本研究中,评估了铜绿假单胞菌在十二烷基硫酸钠包被的铁纳米结构(Fe/SDS)存在下产生生物表面活性剂的基因表达。通过乳化指数和表面张力降低试验考察了鼠李糖脂的稳定性和乳化性。用薄层色谱(TLC)评价纯化,并用q-PCR技术测定rhlA、mvfR、lasR、rhlR基因的表达。TEM证实了纳米颗粒与生物表面活性剂的结合。最佳乳化指数是通过将样品暴露于1mg/LFe/SDS纳米颗粒2天。在纳米颗粒存在下产生的鼠李糖脂具有可接受的降低表面张力的能力。通过色谱法获得的Rf(保留因子)值为0.63。q-PCR结果显示,在Fe/SDS处理的细胞中,rhlA、mvfR、lasR、rhlR基因的表达显著增加,这表明纳米颗粒对处理的细胞产生生物表面活性剂具有显著的正向作用(P<;0.05)。而SDS和Fe单独对这些基因的表达没有显著影响(P>0.05)。我们的发现表明了纳米颗粒在增加铜绿假单胞菌生物表面活性剂生产途径中基因表达方面的重要性。
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引用次数: 5
Novel application of anti-human Fc nanobody for screening high-producing CHO cells for monoclonal antibody 抗人Fc纳米体在筛选高产CHO细胞单克隆抗体中的新应用
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-08-23 DOI: 10.1002/elsc.202200028
Di Zhu, Zheng Wang, Yunxia Xu, Jing Lin, Mei Qiu, Jianghai Liu, Xinlei Li

Animal-derived anti-IgG secondary antibodies are currently employed to stain and screen of human monoclonal antibody(mAb)-producing cells, but using animal-derived antibodies may raise the concerns of high cost, complicated operations and biological safety issues in biopharmaceutical manufacturing. Nanobodies(VHHs) are attractive forms of antibodies for their straightforward engineering and expression in both eukaryotic and prokaryotic systems. Using phage-displayed immune llama VHH library, we identified new anti-Fc VHHs that could bind to human Fc with high affinity. In GFP fusion format, the anti-Fc VHH-GFP generated dramatically stronger FACS signals than AF488 conjugated anti-IgG antibodies when used for staining mAb-producing CHO cells. Furthermore, preparative sorting of CHO cells based on anti-Fc VHH-GFP staining resulted in the enrichment of cell lines capable of synthesizing mAb at high productivity. This safe and cost-efficient anti-Fc VHH-GFP may optimize the process of generating highly productive cell lines for therapeutic mAb production compared to conventional animal-derived fluorescent antibodies.

动物源性抗igg二抗目前用于人单克隆抗体(mAb)产生细胞的染色和筛选,但在生物制药生产中,使用动物源性抗体可能会引起成本高、操作复杂和生物安全性问题的担忧。纳米小体(VHHs)是一种有吸引力的抗体形式,因为它们在真核和原核系统中都具有简单的工程和表达。利用噬菌体展示的免疫羊驼vhh文库,我们发现了新的抗Fc VHH,可以高亲和力地与人类Fc结合。在GFP融合格式中,当用于染色产生单克隆抗体的CHO细胞时,抗fc VHH-GFP比AF488结合的抗igg抗体产生更强的FACS信号。此外,基于抗fc VHH-GFP染色对CHO细胞进行制备分选,富集了能够高产量合成单抗的细胞系。与传统的动物源性荧光抗体相比,这种安全且经济高效的抗fc VHH-GFP可以优化生产用于治疗性单抗生产的高产细胞系的过程。
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引用次数: 0
3D-printed autoclavable plant holders to facilitate large-scale protein production in plants 3d打印的可高压灭菌植物支架,以促进植物中的大规模蛋白质生产
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-08-15 DOI: 10.1002/elsc.202200001
Ling Chuang, Anton Enders, Sascha Offermann, Janina Bahnemann, Jakob Franke

The Australian tobacco plant Nicotiana benthamiana is becoming increasingly popular as a platform for protein production and metabolic engineering. In this system, gene expression is achieved transiently by infiltrating N. benthamiana plants with suspensions of Agrobacterium tumefaciens carrying vectors with the target genes. To infiltrate larger numbers of plants, vacuum infiltration is the most efficient approach known, which is already used on industrial scale. Current laboratory-scale solutions for vacuum infiltration, however, either require expensive custom-tailored equipment or produce large amounts of biologically contaminated waste. To overcome these problems and lower the burden to establish vacuum infiltration in new laboratories, we present here 3D-printed plant holders for vacuum infiltration. We demonstrate that our plant holders are simple to use and enable a throughput of around 40 plants per hour. In addition, our 3D-printed plant holders are made from autoclavable material, which tolerate at least 12 autoclave cycles, helping to limit the production of contaminated waste and thus contributing to increased sustainability in research. In conclusion, our plant holders provide a simple, robust, safe and transparent platform for laboratory-scale vacuum infiltration that can be readily adopted by new laboratories interested in protein and metabolite production in Nicotiana benthamiana.

Practical application

Transient expression in Nicotiana benthamiana provides a popular and rapid system for producing proteins in a plant host. To infiltrate larger numbers of plants (typically >20), vacuum infiltration is the method of choice. However, no system has been described so far which is robust to use and can be used without expensive and complex equipment. Our autoclavable 3D-printed plant holders presented here will greatly reduce the efforts required to adopt the vacuum infiltration technique in new laboratories. They are easy to use and can be autoclaved at least 12 times, which contributes to waste reduction and sustainability in research laboratories. We anticipate that the 3D printing design provided here will drastically lower the bar for new groups to employ vacuum infiltration for producing proteins and metabolites in Nicotiana benthamiana.

作为蛋白质生产和代谢工程的平台,澳大利亚烟草植物benthamiana正变得越来越受欢迎。在该系统中,通过将农杆菌悬浮液携带携带目标基因的载体浸润本菌属植物,实现基因的短暂表达。为了渗透更多的植物,真空渗透是已知的最有效的方法,已经在工业规模上使用。然而,目前实验室规模的真空渗透解决方案要么需要昂贵的定制设备,要么会产生大量受生物污染的废物。为了克服这些问题,降低在新实验室建立真空渗透的负担,我们在这里提出了3d打印的真空渗透装置支架。我们证明我们的植物支架使用简单,每小时可实现约40个植物的吞吐量。此外,我们的3d打印植物支架由可高压灭菌的材料制成,可承受至少12个高压灭菌循环,有助于限制污染废物的产生,从而有助于提高研究的可持续性。总之,我们的植物支架为实验室规模的真空渗透提供了一个简单、可靠、安全和透明的平台,可以很容易地被对benthamiana蛋白质和代谢物生产感兴趣的新实验室采用。本拟烟的瞬时表达为植物寄主中蛋白质的快速生成提供了一种流行的系统。为了渗透更多的植物(通常是20),真空渗透是首选的方法。然而,到目前为止,还没有一种系统可以可靠地使用,并且可以在没有昂贵和复杂设备的情况下使用。我们在这里展示的可高压灭菌的3d打印植物支架将大大减少在新实验室采用真空渗透技术所需的努力。它们易于使用,可以至少蒸12次,这有助于减少浪费和研究实验室的可持续性。我们预计,这里提供的3D打印设计将大大降低新群体使用真空渗透来生产本烟中蛋白质和代谢物的门槛。
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引用次数: 0
Removal of heavy metals from industrial wastewater using microbial fuel cell 微生物燃料电池去除工业废水中的重金属
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-08-03 DOI: 10.1002/elsc.202200009
Sameer Al-Asheh, Marzieh Bagheri, Ahmad Aidan

Removal efficiency of gold from a solution of pure tetrachloroaurate ions was investigated using microbial fuel cell (MFC) technology. The effects of type of catholyte solution and initial gold concentration on the removal efficiency were considered. Due to its presence at high levels in the gold wastewater, the effect of copper ions on the removal efficiency of the gold ions was also studied. The effects of pH and initial biomass concentration on the gold removal efficiency was also determined. The results showed that after 5 h contact time, 95% of gold removal efficiency from a wastewater containing 250 ppm of initial gold ions at ambient temperature using 80 g/L yeast concentration was achieved. After 48 h of the cell's operation under the same condition, 98.86% of AuCl4 ions were successfully removed from the solution. At initial gold concentration in the waste solution of 250 ppm, pH 2, and initial yeast concentration of 80 g/L, 100% removal efficiency of the gold was achieved. On the other hand, the most suitable condition for copper removal was found at a pH of 5.2, where 53% removal efficiency from the waste solution was accomplished.

采用微生物燃料电池(MFC)技术研究了纯四氯酸盐离子溶液中金的去除率。考察了阴极溶液类型和初始金浓度对去除率的影响。由于铜离子在金废水中的含量较高,研究了铜离子对金离子去除率的影响。考察了pH和初始生物量浓度对脱金效率的影响。结果表明,在常温条件下,酵母浓度为80 g/L,初始金离子浓度为250 ppm的废水中,接触时间为5 h后,金的去除率可达95%。在相同条件下运行48h后,98.86%的AuCl4 -离子被成功地从溶液中去除。废液中金的初始浓度为250 ppm, pH为2,酵母初始浓度为80 g/L,金的去除率达到100%。另一方面,在pH为5.2的条件下,废液中铜的去除率达到53%。
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引用次数: 5
Cover Picture: Engineering in Life Sciences 8'22 封面图片:生命科学工程8'22
IF 2.7 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-08-03 DOI: 10.1002/elsc.202270081
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引用次数: 0
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Engineering in Life Sciences
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