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2020 27th National and 5th International Iranian Conference on Biomedical Engineering (ICBME)最新文献

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Effect of hydroxyapatite fiber’s shape on mechanical properties of calcium phosphate cement 羟基磷灰石纤维形态对磷酸钙水泥力学性能的影响
Sadegh Ghofrani, Ali Abouei Mehrizi
Calcium phosphate cements are one the best grafting materials in bone fracture repair. They are easily shapeable, bioactive, and biocompatible. These group of materials have lower fracture toughness and compressive strength, due to their porosity. For enhancement of some mechanical properties and reducing porosity, they are combined with materials such as hydroxyapatite fibers. This combination makes it possible to control and increase elastic modulus and compressive strength. The shape and the orientation of fibers can affect these parameters. In this study, mechanical properties of calcium phosphate cement which is enhanced by three different shaped fibers of hydroxyapatite is investigated via FEM simulation. Ratio of the fibers added in this composite cement is 10 vol.% and they are in spherical, ellipsoidal, and polyhedral shapes. Three specimens have about same elastic modulus but compressive strengths of each specimen and the stress distribution among the fibers are different.
磷酸钙骨水泥是骨折修复中最好的植骨材料之一。它们易于成型,具有生物活性和生物相容性。由于多孔性,这类材料具有较低的断裂韧性和抗压强度。为了增强某些机械性能和减少孔隙率,它们与羟基磷灰石纤维等材料结合使用。这种组合使得控制和提高弹性模量和抗压强度成为可能。纤维的形状和取向会影响这些参数。通过有限元模拟研究了三种不同形状的羟基磷灰石纤维增强磷酸钙水泥的力学性能。该复合水泥中纤维的添加比为10 vol.%,纤维形状为球形、椭球形和多面体。三种试样的弹性模量基本相同,但各试样的抗压强度和纤维间的应力分布不同。
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引用次数: 0
Computerized Diagnosis of the Prolapsed Mitral Valve Using Heart Sound Signal 心音信号对二尖瓣脱垂的计算机诊断
Mahtab Mehrabbeik, S. Rashidi, A. Fallah, Elaheh Rafiei Khoshnood
Cardiovascular diseases (CVDs) are one of the leading causes of death each year. Early diagnosis of CVDs can help to control and prevent the complication of heart diseases. Although auscultation is one of the conventional methods of CVDs diagnosis, it is not accurate enough because of the human hearing restrictions and nonstationary nature of the heart sounds. Because the heart sound or phonocardiogram (PCG) signal contains heart functional information, it can be employed to diagnose various types of CVDs. The goal of this study is to detect Mitral valve Prolapse (PMV) using PCGs. To reach the goal, first, the PCGs were denoised using the Chebyshev filter along with the Wavelet Transform (WT). Then, using the Shannon Energy Envelope (SEE) along with adaptive thresholding, the denoised PCGs were divided into the cardiac cycles. Fractional Fourier Transform (FrFT) was performed to extract the desired features in the time-frequency space. Based on the Mahalanobis distance criterion, the optimal features were selected. The results of the proposed algorithm on the 15 prolapsed and 5 non-prolapsed patients show 95.65% accuracy using the SVM classifier.
心血管疾病(cvd)是每年死亡的主要原因之一。心血管疾病的早期诊断有助于控制和预防心脏病并发症。虽然听诊是cvd的常规诊断方法之一,但由于人的听力限制和心音的非静止性,听诊不够准确。由于心音或心音图(PCG)信号中含有心功能信息,可用于诊断各种类型的心血管疾病。本研究的目的是利用PCGs检测二尖瓣脱垂(PMV)。为了达到目标,首先,使用切比雪夫滤波器和小波变换(WT)对pcg进行去噪。然后,利用香农能量包络(Shannon Energy Envelope, SEE)和自适应阈值法,对去噪后的心电图进行心循环划分。采用分数阶傅立叶变换(FrFT)在时频空间中提取所需特征。基于马氏距离准则,选取最优特征。采用SVM分类器对15例脱垂患者和5例非脱垂患者进行分类,准确率达到95.65%。
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引用次数: 0
Diagnosis of Hodgkin's disease by identifying Reed-Sternberg cell nuclei in histopathological images of lymph nodes stained with Hematoxylin and Eosin 苏木精和伊红染色淋巴结组织病理学图像中Reed-Sternberg细胞核的鉴别诊断何杰金氏病
Mohammad Hossein Masoudi, M. Mikaeili
Hodgkin's disease is a cancer of the lymphatic system, which is part of the immune system. For an accurate diagnosis, a pathologist examines a slide of a sample of lymph node tissue stained with hematoxylin and eosin to find a tumoral cell called Reed-Sternberg cell. The diagnosis is subjective and prone to inter/intra-observer variations. Furthermore, it is a time-consuming task. Therefore, there is a necessity to provide an automatic system for better diagnosis and detection. In this paper, a method for identifying Reed-Sternberg cell nuclei in histopathological images of lymph nodes stained with (H&E) is presented. In the preprocessing stage, noise and annoying structures are removed. Then, we identify RS cell nuclei using three different segmentation algorithms based on morphological, color, and textural features. Using the Chan-Vese Active Contour model, we find the exact boundary of the RS cell nuclei in the histopathological image and distinguish them from other objects in the image with high accuracy. The proposed scheme is tested on an actual dataset containing 98 Reed-Sternberg cell images. The experiments' results show a high correlation between the results of the proposed algorithm and the ground-truth described by the pathologists. Moreover, a comparative study with other cell nuclei segmentation methods on histopathological images demonstrates the proposed method's efficiency. It gives the highest average accuracy rate (93.80 %) compared to recent approaches.
何杰金氏病是淋巴系统的一种癌症,淋巴系统是免疫系统的一部分。为了得到准确的诊断,病理学家检查了被苏木精和伊红染色的淋巴结组织样本的切片,以找到一种叫做里德-斯滕伯格细胞的肿瘤细胞。诊断是主观的,容易在观察者之间/内部发生变化。此外,这是一项耗时的任务。因此,有必要提供一个更好的自动诊断和检测系统。本文介绍了一种在(H&E)染色的淋巴结组织病理学图像中识别Reed-Sternberg细胞核的方法。在预处理阶段,去除噪声和恼人的结构。然后,我们使用三种不同的基于形态学、颜色和纹理特征的分割算法来识别RS细胞核。利用Chan-Vese活动轮廓模型,我们找到了组织病理图像中RS细胞核的精确边界,并与图像中的其他物体进行了高精度的区分。在包含98张Reed-Sternberg细胞图像的实际数据集上对该方案进行了测试。实验结果表明,所提出算法的结果与病理学家描述的基本事实之间存在高度相关性。此外,通过与其他组织病理图像的细胞核分割方法的比较研究,证明了该方法的有效性。与最近的方法相比,它给出了最高的平均准确率(93.80%)。
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引用次数: 2
The impact of electrode reduction in the diagnosis of dyslexia 电极减少对阅读障碍诊断的影响
Roya Kheyrkhah Shali, S. Setarehdan
Dyslexia is a learning disorder and involves disability in reading. It is a deficit with a brain origin despite the presence of good intelligence. Dyslexic patients may have lower rates of learning compared to healthy individuals of the same age. This is a critical problem in the learning process at school years, which makes it important to determine the origin of dyslexia in the brain for treatment. There are different methods to investigate how the brain works. One of these methods is to record brain signals (Electroencephalography (EEG)). Dyslexic children have shown some anxiety and restlessness due to inability to perform tasks properly. Thus, their additional movements may cause an error in the signal recording. Reducing the number of connections decreases the possibility of measurement errors in EEG recording. We determined the optimal group of electrodes for Identification Dyslexic Patients in this research. The reduction in the number of electrodes makes the test easier and more practical. Classification accuracy can also improve with the removal of irrelevant channels. Bhagavatula (2009) and Modrzejewski (1993) increased the accuracy of the classification by removing inefficient electrodes. For this purpose, we extracted the best features including RSP features, mean, standard deviation, skewness and kurtosis, hjorth and AR parameters. Then, both SVM and Bayes classifiers were used to separate two classes. We used Mutual Information (MI) to electrode reduction. The aim of the proposed method is to apply reduced electrodes on dyslexic children and reach acceptable results for diagnosis. Finally, we succeeded to reduce the number of electrode channels from 19 to 2-6 and attain a classification accuracy of 70%.
阅读障碍是一种学习障碍,涉及阅读障碍。这是一种源自大脑的缺陷,尽管存在良好的智力。与同年龄的健康个体相比,诵读困难患者的学习速度可能较低。这是学龄期学习过程中的一个关键问题,因此确定大脑中阅读障碍的起源以进行治疗非常重要。研究大脑如何工作有不同的方法。其中一种方法是记录大脑信号(脑电图)。有阅读障碍的儿童由于不能正确地执行任务而表现出一些焦虑和不安。因此,它们的额外运动可能会导致信号记录中的错误。减少脑电连接数可以减少脑电记录中测量误差的可能性。在这项研究中,我们确定了识别阅读障碍患者的最佳电极组。电极数量的减少使测试更容易、更实用。通过去除不相关的通道,分类精度也可以得到提高。Bhagavatula(2009)和Modrzejewski(1993)通过去除低效电极来提高分类的准确性。为此,我们提取了最佳特征,包括RSP特征、均值、标准差、偏度和峰度、hjorth和AR参数。然后,使用支持向量机和贝叶斯分类器对两个类别进行分离。我们使用互信息(MI)进行电极还原。提出的方法的目的是应用减少电极对诵读困难的儿童和达到可接受的诊断结果。最后,我们成功地将电极通道的数量从19个减少到2-6个,并获得了70%的分类准确率。
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引用次数: 3
[ICBME 2020 Front cover] [ICBME 2020封面]
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引用次数: 0
Parametric Design and Finite Element Simulation of Coronary Stents 冠状动脉支架的参数化设计与有限元模拟
S. Tayyebi, Sara Ghasemi, M. Mokhlesabadi, S. Barati, N. Fatouraee
The high prevalence of cardiovascular diseases has increased the demand for using different stents. To prevent instent restenosis, the design and fabrication of safer stents for coronary angioplasty is essential. However, prototyping and mechanical testing of new stent designs are challenging, time-consuming, and expensive procedures. Therefore, parametric models and finite element simulations are used to help designers improve stent designs. In this study, three commercially available coronary stents are parametrically designed and modeled based on their diameter, number of rings, number of peaks, and strut thickness. Moreover, a finite element simulation of the expansion of each model in the artery is performed to investigate the effect of links on stent function and vascular injury. The results demonstrate that the applied stresses on the stent during its placement in the coronary artery are beyond elastic limits, and the stent’s material enters its plastic zone accordingly. The applied strain is less than the failure strain of the material. By comparing maximum Von-Mises stress, foreshortening, and dogboning of different types of stents, it can be concluded that the closed-cell stent is a safer model and causes fewer side effects regarding vascular injuries. However, open-cell stents provide more flexibility and can be advantageous in curved vessels. It is noteworthy that parametric modeling of stents can be beneficial in future studies and finite element analysis of stents for understanding the effect of the geometric parameters on stent function.
心血管疾病的高患病率增加了使用不同支架的需求。为了防止支架再狭窄,设计和制造更安全的冠状动脉血管成形术支架是必不可少的。然而,新支架设计的原型和机械测试是具有挑战性的,耗时且昂贵的过程。因此,参数化模型和有限元模拟可以帮助设计人员改进支架设计。在本研究中,三个市售的冠状动脉支架根据其直径、环数、峰值数和支撑厚度进行参数化设计和建模。此外,对每个模型在动脉中的扩张进行了有限元模拟,以研究链接对支架功能和血管损伤的影响。结果表明,支架在冠状动脉内放置过程中的外加应力超出弹性极限,支架材料进入塑性区。施加的应变小于材料的破坏应变。通过比较不同类型支架的最大Von-Mises应力、预缩和狗骨化,可以得出闭细胞支架是一种更安全的模型,对血管损伤的副作用更小。然而,开放细胞支架提供了更多的灵活性,在弯曲的血管中是有利的。值得注意的是,支架的参数化建模有助于今后支架的研究和有限元分析,了解几何参数对支架功能的影响。
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引用次数: 0
Brain State-Space Model Parameters Estimation During Non-Invasive Stimulation 非侵入性刺激过程中脑状态空间模型参数估计
Maryam Kiakojouri, H. Momeni, A. Ramezani
Brain dynamic modeling is essential in understanding neural mechanisms and also developing neurotechnologies such as closed-loop brain stimulation systems that are used in a broad range of neurological disorders. In this paper, intending to model brain’s dynamic in the presence of non-invasive stimulation, we present a dynamic model of electroencephalography (EEG) activity under transcranial magnetic stimulation (TMS). In this regard, using collected data from the conducted TMS/EEG experiment and performing special preprocessing steps on that we build a multi-input multi-output (MIMO) linear state-space model (LSSM) for the temporal dynamics of EEG signal. To further investigate LSSM's performance, we also use a multilayer perceptron (MLP) model structure and evaluate its prediction ability. Results illustrate that despite the low signal-to-noise ratio in EEG signal, especially during the stimulation, LSSM as a general linear model performs well in predicting EEG dynamics. Also, choosing an MLP nonlinear structure with more complexity does not improve the prediction performance. The present study can be considered as a preliminary approach in modeling neural signals during stimulation. Expanding the proposed method in modeling other features of neural signals during the stimulation procedures can be a promising step toward designing closed-loop stimulation systems.
脑动力学建模对于理解神经机制和开发神经技术至关重要,例如用于广泛神经系统疾病的闭环脑刺激系统。为了模拟无创刺激下的脑动态,我们建立了经颅磁刺激(TMS)下脑电图(EEG)活动的动态模型。为此,利用经颅磁刺激/脑电实验采集的数据,并对其进行特殊的预处理,建立了脑电信号时间动态的多输入多输出(MIMO)线性状态空间模型(LSSM)。为了进一步研究LSSM的性能,我们还使用多层感知器(MLP)模型结构并评估其预测能力。结果表明,尽管脑电信号的信噪比较低,特别是在刺激过程中,但LSSM作为一种一般的线性模型,在预测脑电信号动态方面表现良好。此外,选择复杂度较高的MLP非线性结构并不能提高预测性能。本研究可作为模拟刺激过程中神经信号的初步方法。将所提出的方法扩展到模拟刺激过程中神经信号的其他特征,是设计闭环刺激系统的一个有希望的步骤。
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引用次数: 1
Antibacterial Polymeric Wound Dressing Based On PVA/Graphene Oxide-Nigella Sativa-Arginine 聚乙烯醇/氧化石墨烯-黑草-精氨酸抗菌高分子创面敷料
M. Salmeh, Mehrab Pourmadadi, F. Yazdian, H. Rashedi
The number of patients with various types of skin wounds has increased due to the emergence of new skin diseases. So that the traditional dressings have fallen out of the reach of researchers and replaced with new ones. Nowadays, biopolymeric scaffolds, especially nanofibers, are widely considered for engineering applications of skin tissue and wound coating. At first, Graphene oxide was synthesized from graphite and then added to the extract of Nigella sativa and Arginine. FTIR, Zeta potential, SEM and Mapping Elemental analyzes were used to confirm the accuracy of the materials. The antibacterial properties of the materials were also evaluated by MIC, OD and disk diffusion assay. The results showed that these materials are capable of inhibiting the growth of Gram-positive and Gram-negative bacteria. Next, the PVA solution was prepared and combined with GO/NS/Arg to produce by the electro spinning process of nanofibers. FTIR and elemental mapping confirmed the presence of nanomaterials in the nanofibers. Also, tensile strength test was performed to investigate the properties of nanofibers. According to the results, the tensile strength in the presence of GO/NS/Arg showed good results and its maximum strain was 1.42. Fibroblast cells were used to evaluate cell toxicity and viability by MTT and Scratching methods. The results indicate the non-toxicity of the nanocomposite at concentration 2 (µg)/mL. Nanofibers were used to investigate wound healing in animal models, and the results indicated that these nanofibers can accelerate the wound healing process, so that after 14 days the wound healing rate was 93.126%.
由于新的皮肤病的出现,各种类型皮肤伤口的患者数量有所增加。因此,传统的敷料已经超出了研究人员的范围,取而代之的是新的敷料。目前,生物聚合物支架,特别是纳米纤维,在皮肤组织和伤口涂层的工程应用中被广泛考虑。首先以石墨为原料合成氧化石墨烯,然后将氧化石墨烯加入到黑草提取物和精氨酸中。用FTIR、Zeta电位、SEM和Mapping element分析等方法验证了材料的准确性。通过MIC、OD和纸片扩散法对材料的抗菌性能进行了评价。结果表明,这些材料能够抑制革兰氏阳性菌和革兰氏阴性菌的生长。然后,制备PVA溶液,并与GO/NS/Arg复合,采用电纺丝法制备纳米纤维。红外光谱和元素映射证实了纳米纤维中存在纳米材料。并通过拉伸强度试验对纳米纤维的性能进行了研究。结果表明,在GO/NS/Arg存在下,材料的抗拉强度表现良好,其最大应变为1.42。用MTT法和scratch法评价成纤维细胞的毒性和活力。结果表明,纳米复合材料在浓度为2(µg)/mL时无毒性。实验结果表明,纳米纤维可促进创面愈合,14 d后创面愈合率达93.126%。
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引用次数: 8
Hyperelastic Constitutive Model for Sheep Intervertebral Disc 绵羊椎间盘超弹性本构模型
Reyhane Faraji, Vida Shams Esfand Abadi, M. B. Shirin
The intervertebral disc (IVD) plays an important role in the normal functioning of the spine and acts as an interface to hold the vertebra together. IVDs have been subjected to different tests to find out their mechanical models. Different species of animal models are used for in vivo and in vitro for spinal column researches. Many studies have found similarities between sheep and human spines in terms of anatomy and geometry. The study of biomechanical similarities is essential for the improvement of diseases and surgical techniques. Obtaining precise mechanical behavior of IVDs is great importance for researching. In this study we try to investigate the hyperelastic behavior of sheep intervertebral disc and also find the appropriate mathematical model for describing of that. In order to do this, after isolating intervertebral disc from sheep uniaxial compression tests with constant strain rate carried out and the achieved data were used to fitted by three conventional hyper-elastic models, i.e. Moony-Rivlin, Neo-Hookean and Yeoh to report the best hyperelastic model for IVD.
椎间盘(IVD)在脊柱的正常功能中起着重要的作用,并作为将椎体连接在一起的界面。ivd进行了不同的测试,以找出它们的力学模型。不同种类的动物模型分别用于体内和体外脊柱研究。许多研究发现羊和人类的脊椎在解剖学和几何学上有相似之处。生物力学相似性的研究对于疾病和手术技术的改进是必不可少的。精确获取ivd的力学行为对研究具有重要意义。在这项研究中,我们试图研究羊椎间盘的超弹性行为,并找到合适的数学模型来描述这种行为。为此,在分离绵羊椎间盘进行恒定应变率单轴压缩试验后,将获得的数据用Moony-Rivlin、Neo-Hookean和Yeoh三种常规超弹性模型进行拟合,以报告最佳的IVD超弹性模型。
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引用次数: 0
A Two-step Registration Approach: Application in MRI-based Strain Calculation of the Left Ventricle 两步配准方法在左心室核磁共振应变计算中的应用
Gelareh Valizadeh, F. B. Mofrad, Ahmad Shalbaf
Registration and finding anatomical correspondent landmarks amongst the volumetric images in both inter and intra-subject studies are prevalent challenges, especially in the field of cardiac image analysis. On the other hand, among other functional criteria, the strain is promising to identify differences in the early stages of cardiac diseases. This study aims to develop a transformation model on the existing FFD non-rigid registration algorithm using combining the shape-based and the intensity-based approaches. A novel two-step multi-resolution non-rigid FFD-based registration algorithm was proposed to measure the radial strain of the left ventricle during the cardiac cycle using cine-MRI images. The endocardial wall shape information was introduced to improve the registration accuracy by combining the original intensity-based registration with the shape-based registration approach. The proposed algorithm was evaluated on ten sequences of cine-MR images: First, the proposed algorithm was validated by two identified 3D-landmarks and then applied to a healthy subject and an LVH patient to calculate the left ventricle regional radial strain during a cardiac cycle. Regarding two anatomical landmarks, their estimated displacements from our proposed two-step registration algorithm showed a better match with the reference values compared to the classical registration method. Moreover, a comparison of normal and abnormal radial segmental strain values calculated by our proposed algorithm showed a clear difference in their functional properties. The promising results showed that the proposed registration algorithm outperformed the conventional one in terms of the accuracies of the point-tracking.
在受试者之间和受试者内部的研究中,在体积图像之间进行配准和寻找解剖对应的标记是普遍存在的挑战,特别是在心脏图像分析领域。另一方面,在其他功能标准中,该菌株有望识别心脏疾病早期阶段的差异。本研究旨在结合基于形状和基于强度的方法,在现有的FFD非刚性配准算法的基础上建立一种转换模型。提出了一种新的两步多分辨率非刚性ffd配准算法,利用电影mri图像测量心脏周期左心室径向应变。引入心内膜壁形状信息,将原有的基于强度的配准与基于形状的配准相结合,提高了配准精度。首先,通过两个已识别的3d地标对算法进行验证,然后应用于健康受试者和LVH患者,计算心周期期间左心室区域径向应变。对于两个解剖标志,我们提出的两步配准算法与经典配准方法相比,其估计位移与参考值的匹配更好。通过对正常和异常径向分段应变值的比较,可以看出正常和异常径向分段应变值在功能特性上存在明显差异。实验结果表明,该配准算法在点跟踪精度方面优于传统配准算法。
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引用次数: 0
期刊
2020 27th National and 5th International Iranian Conference on Biomedical Engineering (ICBME)
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