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Gut microbes with the gbu genes determine TMAO production from L-carnitine intake and serve as a biomarker for precision nutrition.
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-12-26 DOI: 10.1080/19490976.2024.2446374
Wei-Kai Wu,Yi-Ling Lo,Jian-Ying Chiu,Chia-Lang Hsu,I-Hsuan Lo,Suraphan Panyod,Yu-Chieh Liao,Tina H T Chiu,Yu-Tang Yang,Han-Chun Kuo,Hsin-Bai Zou,Yi-Hsun Chen,Hsiao-Li Chuang,Jeffrey J Y Yen,Jin-Town Wang,Han-Mo Chiu,Cheng-Chih Hsu,Ching-Hua Kuo,Lee-Yan Sheen,Hsien-Li Kao,Ming-Shiang Wu
Gut microbial metabolism of L-carnitine, which leads to the production of detrimental trimethylamine N-oxide (TMAO), offers a plausible link between red meat consumption and cardiovascular risks. Several microbial genes, including cntA/B, the cai operon, and the recently identified gbu gene cluster, have been implicated in the conversion of dietary L-carnitine into TMA(O). However, the key microbial genes and associated gut microbes involved in this pathway have not been fully explored. Utilizing the oral carnitine challenge test (OCCT), which specifically measures TMAO production from L-carnitine intake and identifies TMAO producer phenotypes, we compared the abundance of microbial genes between low- and high-TMAO producers across three independent cohorts. Our findings consistently revealed that the gbu gene cluster, rather than cntA/B or the cai operon, was significantly enriched in high-TMAO producers. We further analyzed 292 paired multi-omic datasets from OCCT and shotgun metagenomic sequencing, which demonstrated a significant positive correlation between the abundance of fecal gbu genes and L-carnitine-induced TMAO production, with gbuB showing the strongest correlation. Interestingly, these fecal gbu genes were found to increase with L-carnitine supplementation and decrease with a plant-based diet. Notably, we verified a previously uncultured gbu-containing bacterium, JAGTTR01 sp018223385, as the major contributor to TMA formation in the human gut. We isolated these gbu-containing gut microbes and confirmed their role in TMA/TMAO production using anaerobic incubation and a gnotobiotic mouse model. Using an in-house collection of gbu-containing isolates, we developed a qPCR-based method to quantify fecal gbuB and validated its correlation with L-carnitine-mediated TMAO production as measured by OCCT. Overall, these findings suggest that gbu-containing gut microbes are crucial for TMAO increases following L-carnitine intake and may serve as biomarkers or targets for personalized nutrition.
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引用次数: 0
Gut microbiota-derived 4-hydroxyphenylacetic acid from resveratrol supplementation prevents obesity through SIRT1 signaling activation.
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-12-26 DOI: 10.1080/19490976.2024.2446391
Pan Wang,Ruiqi Wang,Wenting Zhao,Yuanyuan Zhao,Dan Wang,Shuang Zhao,Zhiwen Ge,Yue Ma,Xiaoyan Zhao
Resveratrol (RSV), a natural polyphenol, has been suggested to influence glucose and lipid metabolism. However, the underlying molecular mechanism of its action remains largely unknown due to its multiple biological targets and low bioavailability. In this study, we demonstrate that RSV supplementation ameliorates high-fat-diet (HFD)-induced gut microbiota dysbiosis, enhancing the abundance of anti-obesity bacterial strains such as Akkermansia, Bacteroides and Blautia. The critical role of gut microbiota in RSV-mediated anti-obesity effects was confirmed through antibiotic-induced microbiome depletion and fecal microbiota transplantation (FMT), which showed that RSV treatment effectively mitigates body weight, histopathological damage, glucose dysregulation and systematic inflammation associated with HFD. Metabolomics analysis revealed that RSV supplementation significantly increases the levels of the gut microbial flavonoid catabolite 4-hydroxyphenylacetic acid (4-HPA). Notably, 4-HPA was sufficient to reverse obesity and glucose intolerance in HFD-fed mice. Mechanistically,4-HPA treatment markedly regulates SIRT1 signaling pathways and induces the expression of beige fat and thermogenesis-specific markers in white adipose tissue (WAT). These beneficial effects of 4-HPA are partially abolished by EX527, a known SIRT1 inhibitor. Collectively, our findings indicate that RSV improve obesity through a gut microbiota-derived 4-HPA-SIRT1 axis, highlighting gut microbiota metabolites as a promising target for obesity prevention.
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引用次数: 0
Candida tropicalis-derived vitamin B3 exerts protective effects against intestinal inflammation by promoting IL-17A/IL-22-dependent epithelial barrier function 热带念珠菌衍生的维生素 B3 通过促进 IL-17A/IL-22 依赖性上皮屏障功能对肠道炎症产生保护作用
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-27 DOI: 10.1080/19490976.2024.2416922
Ha T Doan, Li-Chieh Cheng, Yi-Ling Chiu, Yuan-Kai Cheng, Cheng-Chih Hsu, Yee-Chun Chen, Hsiu-Jung Lo, Hao-Sen Chiang
Candida tropicalis-a prevalent gut commensal fungus in healthy individuals – contributes to intestinal health and disease. However, how commensal C. tropicalis influences intestinal homeostasis and...
热带念珠菌是健康人肠道中普遍存在的共生真菌,它对肠道健康和疾病都有影响。然而,共生的热带念珠菌如何影响肠道平衡和疾病?
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引用次数: 0
The role and mechanism of gut-lung axis mediated bidirectional communication in the occurrence and development of chronic obstructive pulmonary disease. 肠肺轴介导的双向交流在慢性阻塞性肺病的发生和发展中的作用和机制。
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-24 DOI: 10.1080/19490976.2024.2414805
Xiaofan Song,Xina Dou,Jiajing Chang,Xiaonan Zeng,Qinhong Xu,Chunlan Xu
The current studies have shown that the occurrence and development of chronic obstructive pulmonary disease (COPD) are closely related to the changes in gut health and its microenvironment, and even some gut diseases have significant clinical correlation with COPD. The dysbiosis of gut microbiota observed in COPD patients also suggests a potential bidirectional interaction between the gut and lung. Communication between the gut and lung may occur through circulating inflammatory cells, gut microbial metabolites, and circulating inflammatory mediators, but the mechanism of bidirectional communication between the gut and lung in COPD is still under study. Therefore, more research is still needed in this area. In this review, we summarize recent clinical studies and animal models on the role of the gut-lung axis in the occurrence and development of COPD and its mechanisms, so as to provide ideas for further research in this field. In addition, we also summarized the negative effects of COPD medication on gut microbiota and the gut microbiota risk factors for COPD and proposed the potential prevention and treatment strategies.
目前的研究表明,慢性阻塞性肺病(COPD)的发生和发展与肠道健康及其微环境的变化密切相关,甚至一些肠道疾病与慢性阻塞性肺病有显著的临床相关性。在慢性阻塞性肺病患者中观察到的肠道微生物群失调也表明,肠道和肺之间可能存在双向互动。肠道和肺之间可能通过循环炎症细胞、肠道微生物代谢产物和循环炎症介质进行交流,但慢性阻塞性肺病患者肠道和肺之间的双向交流机制仍在研究之中。因此,这一领域还需要更多的研究。在这篇综述中,我们总结了近期关于肠肺轴在慢性阻塞性肺病发生和发展中的作用及其机制的临床研究和动物模型,从而为这一领域的进一步研究提供思路。此外,我们还总结了慢性阻塞性肺病药物对肠道微生物群的负面影响以及慢性阻塞性肺病的肠道微生物群危险因素,并提出了潜在的预防和治疗策略。
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引用次数: 0
Morphine-induced intestinal microbial dysbiosis drives TLR-dependent IgA targeting of gram-positive bacteria and upregulation of CD11b and TLR2 on a sub-population of IgA+ B cells. 吗啡诱导的肠道微生物菌群失调促使 TLR 依赖性 IgA 靶向革兰氏阳性细菌,并上调 IgA+ B 细胞亚群的 CD11b 和 TLR2。
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-23 DOI: 10.1080/19490976.2024.2417729
Nicolas Vitari,Salma Singh,Junyi Tao,Bridget Truitt,Udhghatri Kolli,Richa Jalodia,Kathryn M LaPorte,Yaa Abu,Danielle Antoine,Umakant Sharma,Sabita Roy
IgA binding dictates the composition of the intestinal microbiome and reflects dysbiotic states during chronic disease. Both pathogenic and commensal bacteria differentially bind to IgA with varying outcomes. Little is known regarding IgA dynamics immediately following microbial dysbiosis. Recent work shows that morphine treatment rapidly induces microbial dysbiosis within hours of administration. This microbial shift is characterized by the expansion of pathogenic bacteria with a concurrent decrease in commensal bacteria. Because of this rapid microbial shift, a murine model of chronic morphine treatment was used to gain insight on the host IgA response during early microbial disruption. Within 24 h, morphine treatment induces microbial dysbiosis which disrupts IgA-bacterial homeostasis, resulting in an increased concentration of unbound IgA with a corresponding decrease in the frequency of IgA-bound bacteria. Additionally, the increased concentration of unbound IgA is dependent on the microbiome, as microbial depletion abolishes the increase. At 48 h of morphine treatment, the frequency of IgA-bound bacteria increases and IgA-seq reveals increased IgA targeting of gram-positive bacteria. Both a whole-body TLR2 KO and treatment with the TLR inhibitor OxPAPC resulted in abrogation of IgA binding to bacteria, implicating modulation of IgA binding through TLR signaling. Finally, we identify that a sub-population of IgA+ B cells in the intestinal lamina propria has increased CD11b and TLR2 expression at 24 h of morphine treatment which could be a potential source of the observed IgA that targets gram-positive bacteria. Together, we demonstrate for the first time the role of TLR2 in IgA targeting of intestinal bacteria, and this study sheds light on the IgA dynamics during the initial hours of microbial dysbiosis.
IgA 结合决定了肠道微生物群的组成,并反映了慢性疾病期间的菌群失调状态。致病菌和共生菌与 IgA 的结合方式不同,结果也各异。人们对微生物菌群失调后的 IgA 动态知之甚少。最近的研究表明,吗啡治疗可在用药后数小时内迅速诱导微生物菌群失调。这种微生物转变的特点是致病菌增多,同时共生菌减少。由于这种快速的微生物转变,我们使用了一种慢性吗啡治疗的小鼠模型,以深入了解在早期微生物紊乱过程中宿主的 IgA 反应。吗啡治疗会在 24 小时内诱发微生物菌群失调,从而破坏 IgA-细菌平衡,导致非结合 IgA 浓度增加,而 IgA 结合细菌的频率相应减少。此外,非结合 IgA 浓度的增加取决于微生物群,因为微生物的减少会导致非结合 IgA 浓度的增加。吗啡治疗 48 小时后,IgA 结合细菌的频率增加,IgA-seq 发现革兰氏阳性细菌的 IgA 靶向性增加。全身 TLR2 KO 和用 TLR 抑制剂 OxPAPC 处理都会导致 IgA 与细菌的结合减弱,这表明 IgA 的结合是通过 TLR 信号调节的。最后,我们发现在吗啡治疗 24 小时后,肠固有层中的 IgA+ B 细胞亚群的 CD11b 和 TLR2 表达增加,这可能是观察到的针对革兰氏阳性细菌的 IgA 的潜在来源。综上所述,我们首次证明了 TLR2 在以肠道细菌为靶标的 IgA 中的作用,这项研究还揭示了微生物菌群失调初期 IgA 的动态变化。
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引用次数: 0
Fecal samples and rectal swabs adequately reflect the human colonic luminal microbiota. 粪便样本和直肠拭子能充分反映人体结肠腔微生物群。
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-22 DOI: 10.1080/19490976.2024.2416912
Julia Rode,Linnea Brengesjö Johnson,Julia König,Ignacio Rangel,Lars Engstrand,Dirk Repsilber,Robert J Brummer
The appropriateness of the fecal microbiota to adequately reflect the gut microbiota composition from more difficult to access luminal content at different colonic locations has been debated. Here, in a healthy population, luminal samples were collected from terminal ileum to rectum using an unique sampling technique without the need of prior bowel cleansing/preparation. Rectal swabs were collected immediately prior colonoscopy by an experienced physician, and fecal samples were collected at home by the participants themselves. Microbiota composition was evaluated as relative abundance, α-diversity and Bray-Curtis dissimilarities. Our data suggest that fecal samples and rectal swabs present noninvasive, easily accessible, low-cost sampling tools that are accurate proxies to characterize luminal large intestinal microbiota composition.
粪便微生物群是否能充分反映不同结肠位置较难获取的管腔内容物中的肠道微生物群组成一直存在争议。在此,我们采用一种独特的取样技术,从回肠末端到直肠收集健康人群的管腔样本,无需事先进行肠道清洁/准备。直肠拭子由经验丰富的医生在结肠镜检查前立即采集,粪便样本则由参与者在家中自行采集。微生物群组成以相对丰度、α-多样性和布雷-柯蒂斯相似度进行评估。我们的数据表明,粪便样本和直肠拭子是非侵入性、易获取、低成本的采样工具,是描述管腔大肠微生物群组成特征的准确替代物。
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引用次数: 0
Muropeptides and muropeptide transporters impact on host immune response. 肽和肽转运体对宿主免疫反应的影响
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-22 DOI: 10.1080/19490976.2024.2418412
Maria Lucia Orsini Delgado,Joao Gamelas Magalhaes,Rachel Morra,Antonietta Cultrone
In bacteria, the cell envelope is the key element surrounding and protecting the bacterial content from mechanical or osmotic damages. It allows the selective interchanges of solutes, ions, cellular debris, and drugs between the cellular compartments and the external environment, thanks to the presence of transmembrane proteins called transporters. The major component of the cell envelope is the peptidoglycan, consisting of long linear glycan strands cross-linked by short peptide stems. During cell growth or under stress conditions, peptidoglycan fragments, the muropeptides, are released by bacteria and recognized by the host Pattern Recognition Receptor, promoting the activation of their innate defense mechanisms. The review sums up the salient aspects of microbiota-host interaction with a focus on the NOD-dependent immune response to bacterial peptidoglycan and on the accountability of muropeptide transporters in the crosstalk with the host and in antibiotic resistance. Furthermore, it retraces the discoveries and applications of microorganisms-derived components such as vaccines or vaccine adjuvants.
在细菌中,细胞包膜是围绕和保护细菌内容物免受机械或渗透破坏的关键要素。由于存在称为转运体的跨膜蛋白,细胞包膜允许溶质、离子、细胞碎片和药物在细胞区与外部环境之间进行选择性交换。细胞包膜的主要成分是肽聚糖,由短肽链交联的长线性糖链组成。在细胞生长过程中或在应激条件下,细菌会释放肽聚糖片段,即 "微肽",并被宿主的模式识别受体识别,从而促进先天防御机制的激活。这篇综述总结了微生物与宿主相互作用的主要方面,重点是对细菌肽聚糖的 NOD 依赖性免疫反应,以及肽转运体在与宿主的相互作用和抗生素耐药性中的责任。此外,该书还追溯了疫苗或疫苗佐剂等微生物衍生成分的发现和应用。
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引用次数: 0
Inflammasome activation links enteric Salmonella Typhimurium infection to a rapid, cytokine-dependent increase in intestinal mucin release 炎症小体激活将肠道鼠伤寒沙门氏菌感染与细胞因子依赖性肠粘蛋白释放的快速增加联系起来
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-20 DOI: 10.1080/19490976.2024.2413372
Xiao Han, Joannie M. Allaire, Shauna M. Crowley, Jocelyn J. Chan, Kelly Lau, Conghao Zhang, Simon A. Hirota, Kirk Bergstrom, Leigh A. Knodler, Bruce A. Vallance
The host restricts Salmonella enterica serovar Typhimurium infection of the gut via inflammasome-dependent sloughing of infected epithelial cells. Here we determined that concurrent caspase 1/11-de...
宿主通过炎症体依赖性地剥落受感染的上皮细胞来限制伤寒沙门氏菌感染肠道。在这里,我们确定了同时发生的 caspase 1/11-de...
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引用次数: 0
Gut microbial metabolic signatures in diabetes mellitus and potential preventive and therapeutic applications. 糖尿病的肠道微生物代谢特征及潜在的预防和治疗应用。
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-18 DOI: 10.1080/19490976.2024.2401654
Enriqueta Garcia-Gutierrez,A Kate O'Mahony,Reinaldo Sousa Dos Santos,Laura Marroquí,Paul D Cotter
Diabetes mellitus can be subdivided into several categories based on origin and clinical characteristics. The most common forms of diabetes are type 1 (T1D), type 2 diabetes (T2D) and gestational diabetes mellitus (GDM). T1D and T2D are chronic diseases affecting around 537 million adults worldwide and it is projected that these numbers will increase by 12% over the next two decades, while GDM affects up to 30% of women during pregnancy, depending on diagnosis methods. These forms of diabetes have varied origins: T1D is an autoimmune disease, while T2D is commonly associated with, but not limited to, certain lifestyle patterns and GDM can result of a combination of genetic predisposition and pregnancy factors. Despite some pathogenic differences among these forms of diabetes, there are some common markers associated with their development. For instance, gut barrier impairment and inflammation associated with an unbalanced gut microbiota and their metabolites may be common factors in diabetes development and progression. Here, we summarize the microbial signatures that have been linked to diabetes, how they are connected to diet and, ultimately, the impact on metabolite profiles resulting from host-gut microbiota-diet interactions. Additionally, we summarize recent advances relating to promising preventive and therapeutic interventions focusing on the targeted modulation of the gut microbiota to alleviate T1D, T2D and GDM.
糖尿病可根据起源和临床特征细分为几种类型。最常见的糖尿病是 1 型糖尿病(T1D)、2 型糖尿病(T2D)和妊娠糖尿病(GDM)。1 型糖尿病和 2 型糖尿病是影响全球约 5.37 亿成年人的慢性疾病,预计在未来 20 年内,这两个数字还将增加 12%,而妊娠糖尿病根据诊断方法的不同,影响高达 30% 的妊娠期妇女。这些形式的糖尿病有不同的起源:T1D 是一种自身免疫性疾病,而 T2D 通常与某些生活方式有关,但不仅限于此,GDM 则可能是遗传易感性和妊娠因素共同作用的结果。尽管这些形式的糖尿病在致病原因上存在一些差异,但它们的发病有一些共同的标志物。例如,与不平衡的肠道微生物群及其代谢产物相关的肠道屏障损伤和炎症可能是糖尿病发生和发展的共同因素。在此,我们总结了与糖尿病有关的微生物特征,它们与饮食的关系,以及宿主-肠道微生物群-饮食相互作用最终对代谢物谱的影响。此外,我们还总结了与有前景的预防和治疗干预措施有关的最新进展,这些干预措施侧重于有针对性地调节肠道微生物群,以缓解 T1D、T2D 和 GDM。
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引用次数: 0
Gut microbiota determines the fate of dietary fiber-targeted interventions in host health. 肠道微生物群决定了以膳食纤维为目标的干预措施在宿主健康中的命运。
IF 12.2 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2024-10-17 DOI: 10.1080/19490976.2024.2416915
Wenjing Wang,Zhexin Fan,Qingqing Yan,Tong Pan,Jing Luo,Yijiang Wei,Baokun Li,Zhifeng Fang,Wenwei Lu
Epidemiological investigation confirmed that the intake of dietary fiber (DF) is closely related to human health, and the most important factor affecting the physiological function of DF, besides its physicochemical properties, is the gut microbiota. This paper mainly summarizes the interaction between DF and gut microbiota, including the influence of DF on the colonization of gut microbiota based on its different physicochemical properties, and the physiological role of gut microbiota in destroying the complex molecular structure of DF by encoding carbohydrate-active enzymes, thus producing small molecular products that affect the metabolism of the host. Taking cardiovascular disease (Atherosclerosis and hypertension), liver disease, and immune diseases as examples, it is confirmed that some DF, such as fructo-oligosaccharide, galactooligosaccharide, xylo-oligosaccharide, and inulin, have prebiotic-like physiological effects. These effects are dependent on the metabolites produced by the gut microbiota. Therefore, this paper further explores how DF affects the gut microbiota's production of substances such as short-chain fatty acids, bile acids, and tryptophan metabolites, and provides a preliminary explanation of the mechanisms associated with their impact on host health. Finally, based on the structural properties of DF and the large heterogeneity in the composition of the population gut microbiota, it may be a future trend to utilize DF and the gut microbiota to correlate host health for precision nutrition by combining the information from population disease databases.
流行病学调查证实,膳食纤维(DF)的摄入量与人体健康密切相关,而影响DF生理功能的除了其理化性质外,最重要的因素是肠道微生物群。本文主要总结了 DF 与肠道微生物群的相互作用,包括 DF 根据其不同的理化特性对肠道微生物群定植的影响,以及肠道微生物群通过编码碳水化合物活性酶破坏 DF 复杂的分子结构,从而产生影响宿主代谢的小分子产物的生理作用。以心血管疾病(动脉粥样硬化和高血压)、肝脏疾病和免疫疾病为例,已证实一些 DF(如果寡糖、半乳寡糖、木寡糖和菊粉)具有类似益生元的生理效应。这些作用取决于肠道微生物群产生的代谢物。因此,本文进一步探讨了 DF 如何影响肠道微生物群产生短链脂肪酸、胆汁酸和色氨酸代谢产物等物质,并初步解释了这些物质对宿主健康影响的相关机制。最后,基于 DF 的结构特性和人群肠道微生物群组成的巨大异质性,结合人群疾病数据库的信息,利用 DF 和肠道微生物群来关联宿主健康以实现精准营养可能是未来的趋势。
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引用次数: 0
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Gut Microbes
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